HHsearch alignment for GI: 254780426 and conserved domain: COG1253
>COG1253 TlyC Hemolysins and related proteins containing CBS domains [General function prediction only].
Probab=100.00 E-value=0 Score=476.27 Aligned_cols=302 Identities=32% Similarity=0.538 Sum_probs=261.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCH---HHHHHHHHHHHH--HHHHHHHHHCCCCCC------CCHHHHHHHHHHHHHCCCCCH
Q ss_conf 679988765555554443203---568753026899--899998763378888------899999999997997689898
Q gi|254780426|r 4 DFKINSSEHPKEKNEGIDLSP---SISKTSVPAFWT--RTIRALCKTWKLMKL------SHHKGIRLPRIDASLEGIFSE 72 (320)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~p---~l~~i~~P~vw~--~~~~~~~~~~~~~~~------~~~eel~~l~~~~~~~G~i~~ 72 (320)
T Consensus 113 El~PK~~a~~~~e~va~~~a~~~~~~~~l~~P~i~~~~~~a~~il~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~ 191 (429)
T COG1253 113 ELVPKSIAIRNPEKVALLIAPPLRFFYRLLYPLIWLLNRIANAILRLFGVEPVEEEALTSTEEELE-LVSESAEEGVLEE 191 (429)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH-HHHCCCCCCCCCH
T ss_conf 151799998677999998889999999998589999999999999861888666432331167888-8640012686288
Q ss_pred HHHHHHHHHHCCCCEEEHHEEECCCEEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHCCCC
Q ss_conf 99999998730477576413120012999863010367789798659817998418866422410299999876622356
Q gi|254780426|r 73 TEKEIFNNILRFRKIRIDDIMISRVSINAVEDKATVYEAMLMFEKYGRSWMPVYKNSLDNPRGMVHMRDVISYISHMYAK 152 (320)
Q Consensus 73 ~E~~ii~~vl~l~~~~v~diMtPr~~i~~i~~~~~~~e~~~~i~~~~~sR~PV~~~~~d~iiGiv~~kDll~~~~~~~~~ 152 (320)
T Consensus 192 ~E~~mi~~v~~l~~~~v~eiMtPR~~i~~l~~~~~~~~~~~~~~~~~~SR~PV~~~~~D~iiGiv~~Kdll~~~~~~~~- 270 (429)
T COG1253 192 EEREMINNVLDLDDRTVREIMTPRTDIVALDLTDTVEELIELILESGHSRIPVYDGDLDNIIGIVHVKDLLRALLDGQS- 270 (429)
T ss_pred HHHHHHHHHHCCCCCCCCEEEEECCCEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEHHHHHHHHHCCCC-
T ss_conf 9999999650213756261760315579941899999999999758986587885799837888689999976431564-
Q ss_pred CCCCCCCCCCCHHHHCCCCEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCC-HHHC
Q ss_conf 432233345767885156579717885123234320135651165407766204667588999987422210000-0000
Q gi|254780426|r 153 TNNINLNIQLSESNLIKNILFVPSSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVSVLMRDITSEHHS-KKSM 231 (320)
Q Consensus 153 ~~~~~~~~~~~l~~~~r~~~~Vpe~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle~ivGei~de~d~-~~~~ 231 (320)
T Consensus 271 --------~~~~~~~~~~~~~Vpet~~~~~lL~~~r~~~~hmAiVvDEyG~~~GlVTleDIiEeIvGei~de~d~~~~~~ 342 (429)
T COG1253 271 --------DLDLRVLVRPPLFVPETLSLSDLLEEFREERTHMAIVVDEYGGVEGLVTLEDIIEEIVGEIPDEHDEDEEED 342 (429)
T ss_pred --------CCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf --------444200257871778989799999998863874999993789843326589999998487754345545642
Q ss_pred CCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCEEEEEEEECCCEEEEEE
Q ss_conf 12467733783045359999998288888777746743179999998423473798899758959999995188789999
Q gi|254780426|r 232 ISAVSDNTFIVDARTDLEELAKIIGTDCNCLKGEQDVDSLGGLIFSVLDRIPARGEVVLEIPGFEIVILDADVRCVRRVR 311 (320)
Q Consensus 232 i~~~~~g~~~v~G~~~l~~l~~~l~~~l~~~~~~~~~~Ti~G~i~~~l~~iP~~Ge~v~~~~g~~f~V~~~~~~rI~~v~ 311 (320)
T Consensus 343 ~~~~~~~~~~v~G~~~l~e~~~~l~~~~---~~~~~~~Ti~G~v~~~lg~iP~~g~~~-~~~~~~~~V~~~~~~rI~~v~ 418 (429)
T COG1253 343 IIQRDDDGWLVDGRVPLEELEELLGIDL---DEEEDYDTIAGLVLSLLGRIPKVGESV-VIGGLRFEVLDMDGRRIDKVL 418 (429)
T ss_pred CEEECCCCEEEECCCCHHHHHHHHCCCC---CCCCCCCCHHHHHHHHCCCCCCCCCEE-EECCCEEEEEECCCCEEEEEE
T ss_conf 2686389679957315999998729887---546786449999999819989888879-974860899984476589999
Q ss_pred EEECCCCC
Q ss_conf 99634347
Q gi|254780426|r 312 IRRLVHFK 319 (320)
Q Consensus 312 v~~l~~~~ 319 (320)
T Consensus 419 i~~~~~~~ 426 (429)
T COG1253 419 IVRLKDKP 426 (429)
T ss_pred EEECCCCC
T ss_conf 99768888