HHsearch alignment for GI: 254780426 and conserved domain: COG1253

>COG1253 TlyC Hemolysins and related proteins containing CBS domains [General function prediction only].
Probab=100.00  E-value=0  Score=476.27  Aligned_cols=302  Identities=32%  Similarity=0.538  Sum_probs=261.9

Q ss_pred             CCCCCCCCCCCCCCCCCCCCH---HHHHHHHHHHHH--HHHHHHHHHCCCCCC------CCHHHHHHHHHHHHHCCCCCH
Q ss_conf             679988765555554443203---568753026899--899998763378888------899999999997997689898
Q gi|254780426|r    4 DFKINSSEHPKEKNEGIDLSP---SISKTSVPAFWT--RTIRALCKTWKLMKL------SHHKGIRLPRIDASLEGIFSE   72 (320)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~p---~l~~i~~P~vw~--~~~~~~~~~~~~~~~------~~~eel~~l~~~~~~~G~i~~   72 (320)
T Consensus       113 El~PK~~a~~~~e~va~~~a~~~~~~~~l~~P~i~~~~~~a~~il~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~  191 (429)
T COG1253         113 ELVPKSIAIRNPEKVALLIAPPLRFFYRLLYPLIWLLNRIANAILRLFGVEPVEEEALTSTEEELE-LVSESAEEGVLEE  191 (429)
T ss_pred             HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH-HHHCCCCCCCCCH
T ss_conf             151799998677999998889999999998589999999999999861888666432331167888-8640012686288


Q ss_pred             HHHHHHHHHHCCCCEEEHHEEECCCEEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHCCCC
Q ss_conf             99999998730477576413120012999863010367789798659817998418866422410299999876622356
Q gi|254780426|r   73 TEKEIFNNILRFRKIRIDDIMISRVSINAVEDKATVYEAMLMFEKYGRSWMPVYKNSLDNPRGMVHMRDVISYISHMYAK  152 (320)
Q Consensus        73 ~E~~ii~~vl~l~~~~v~diMtPr~~i~~i~~~~~~~e~~~~i~~~~~sR~PV~~~~~d~iiGiv~~kDll~~~~~~~~~  152 (320)
T Consensus       192 ~E~~mi~~v~~l~~~~v~eiMtPR~~i~~l~~~~~~~~~~~~~~~~~~SR~PV~~~~~D~iiGiv~~Kdll~~~~~~~~-  270 (429)
T COG1253         192 EEREMINNVLDLDDRTVREIMTPRTDIVALDLTDTVEELIELILESGHSRIPVYDGDLDNIIGIVHVKDLLRALLDGQS-  270 (429)
T ss_pred             HHHHHHHHHHCCCCCCCCEEEEECCCEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEHHHHHHHHHCCCC-
T ss_conf             9999999650213756261760315579941899999999999758986587885799837888689999976431564-


Q ss_pred             CCCCCCCCCCCHHHHCCCCEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCC-HHHC
Q ss_conf             432233345767885156579717885123234320135651165407766204667588999987422210000-0000
Q gi|254780426|r  153 TNNINLNIQLSESNLIKNILFVPSSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVSVLMRDITSEHHS-KKSM  231 (320)
Q Consensus       153 ~~~~~~~~~~~l~~~~r~~~~Vpe~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle~ivGei~de~d~-~~~~  231 (320)
T Consensus       271 --------~~~~~~~~~~~~~Vpet~~~~~lL~~~r~~~~hmAiVvDEyG~~~GlVTleDIiEeIvGei~de~d~~~~~~  342 (429)
T COG1253         271 --------DLDLRVLVRPPLFVPETLSLSDLLEEFREERTHMAIVVDEYGGVEGLVTLEDIIEEIVGEIPDEHDEDEEED  342 (429)
T ss_pred             --------CCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCEEEECCHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             --------444200257871778989799999998863874999993789843326589999998487754345545642


Q ss_pred             CCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCEEEEEEEECCCEEEEEE
Q ss_conf             12467733783045359999998288888777746743179999998423473798899758959999995188789999
Q gi|254780426|r  232 ISAVSDNTFIVDARTDLEELAKIIGTDCNCLKGEQDVDSLGGLIFSVLDRIPARGEVVLEIPGFEIVILDADVRCVRRVR  311 (320)
Q Consensus       232 i~~~~~g~~~v~G~~~l~~l~~~l~~~l~~~~~~~~~~Ti~G~i~~~l~~iP~~Ge~v~~~~g~~f~V~~~~~~rI~~v~  311 (320)
T Consensus       343 ~~~~~~~~~~v~G~~~l~e~~~~l~~~~---~~~~~~~Ti~G~v~~~lg~iP~~g~~~-~~~~~~~~V~~~~~~rI~~v~  418 (429)
T COG1253         343 IIQRDDDGWLVDGRVPLEELEELLGIDL---DEEEDYDTIAGLVLSLLGRIPKVGESV-VIGGLRFEVLDMDGRRIDKVL  418 (429)
T ss_pred             CEEECCCCEEEECCCCHHHHHHHHCCCC---CCCCCCCCHHHHHHHHCCCCCCCCCEE-EECCCEEEEEECCCCEEEEEE
T ss_conf             2686389679957315999998729887---546786449999999819989888879-974860899984476589999


Q ss_pred             EEECCCCC
Q ss_conf             99634347
Q gi|254780426|r  312 IRRLVHFK  319 (320)
Q Consensus       312 v~~l~~~~  319 (320)
T Consensus       419 i~~~~~~~  426 (429)
T COG1253         419 IVRLKDKP  426 (429)
T ss_pred             EEECCCCC
T ss_conf             99768888