HHsearch alignment for GI: 254780426 and conserved domain: TIGR00393
>TIGR00393 kpsF sugar isomerase, KpsF/GutQ family; InterPro: IPR004800 This is a family of closely related proteins with the phosphosugar-binding domain SIS (Sugar ISomerase) followed by two copies of the CBS (named after Cystathionine Beta Synthase) domain. The group includes GutQ, a protein of the glucitol operon and KpsF, a virulence factor involved in capsular polysialic acid biosynthesis in some pathogenic strains of Escherichia coli.; GO: 0016853 isomerase activity, 0005975 carbohydrate metabolic process.
Probab=98.20 E-value=1.1e-06 Score=63.71 Aligned_cols=135 Identities=13% Similarity=0.206 Sum_probs=107.9
Q ss_pred CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEHHEEECCCEEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 89999999999799768989899999998730477576413120012999863010367789798659817998418866
Q gi|254780426|r 52 SHHKGIRLPRIDASLEGIFSETEKEIFNNILRFRKIRIDDIMISRVSINAVEDKATVYEAMLMFEKYGRSWMPVYKNSLD 131 (320)
Q Consensus 52 ~~~eel~~l~~~~~~~G~i~~~E~~ii~~vl~l~~~~v~diMtPr~~i~~i~~~~~~~e~~~~i~~~~~sR~PV~~~~~d 131 (320)
T Consensus 135 F~~eDFA~----~HPGG~LG~---kLL--------~kV~dlm~t~d~lP~v~~tas~~DAL~e~~~~~LG~~~v~~~~~- 198 (272)
T TIGR00393 135 FSEEDFAK----FHPGGALGR---KLL--------VKVKDLMQTDDELPLVAPTASFKDALLEMSRKRLGLAVVCDENE- 198 (272)
T ss_pred CCHHHHHC----CCCCHHHHH---HHH--------HHHHHHHCCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEECCC-
T ss_conf 88424411----487046667---888--------87677640665678222367720210233137861799971555-
Q ss_pred CCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCC-CEEEC-CCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEE
Q ss_conf 422410299999876622356432233345767885156-57971-788512323432013565116540776620466
Q gi|254780426|r 132 NPRGMVHMRDVISYISHMYAKTNNINLNIQLSESNLIKN-ILFVP-SSMLVSDLLTNIQESRIRMALVIDEHGGTDGLV 208 (320)
Q Consensus 132 ~iiGiv~~kDll~~~~~~~~~~~~~~~~~~~~l~~~~r~-~~~Vp-e~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiV 208 (320)
T Consensus 199 ~~~Gv~tDGD~RR~l~~~g~~~------l~~~v~~~mT~~p~~~~n~~~~l~~A~~~l~~~kI~~~~vvdd~nkl~G~~ 271 (272)
T TIGR00393 199 QLKGVFTDGDLRRVLALLGGGA------LKKEVKDFMTLGPKTLKNSDELLVEALEFLKKRKITSLVVVDDENKLLGVL 271 (272)
T ss_pred CEEEEEECCHHHHHHHHHCCHH------CCCCHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEE
T ss_conf 2467871465999998816600------023122210688813401456899999998727942899983897178753