HHsearch alignment for GI: 254780426 and conserved domain: TIGR00393
>TIGR00393 kpsF sugar isomerase, KpsF/GutQ family; InterPro: IPR004800 This is a family of closely related proteins with the phosphosugar-binding domain SIS (Sugar ISomerase) followed by two copies of the CBS (named after Cystathionine Beta Synthase) domain. The group includes GutQ, a protein of the glucitol operon and KpsF, a virulence factor involved in capsular polysialic acid biosynthesis in some pathogenic strains of Escherichia coli.; GO: 0016853 isomerase activity, 0005975 carbohydrate metabolic process.
Probab=91.35 E-value=0.13 Score=30.46 Aligned_cols=85 Identities=16% Similarity=0.239 Sum_probs=58.8
Q ss_pred HHHHCC---CCEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHH--HHHHHHHHHCCCHHHCCCCCCCC
Q ss_conf 788515---6579717885123234320135651165407766204667588999--98742221000000001246773
Q gi|254780426|r 164 ESNLIK---NILFVPSSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVS--VLMRDITSEHHSKKSMISAVSDN 238 (320)
Q Consensus 164 l~~~~r---~~~~Vpe~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle--~ivGei~de~d~~~~~i~~~~~g 238 (320)
T Consensus 157 V~dlm~t~d~lP~v~~tas~~DAL~e~~~~~LG~~~v~~~~~~~~Gv~tDGD~RR~l~~~g~~~--l~~~v~~~mT~~p~ 234 (272)
T TIGR00393 157 VKDLMQTDDELPLVAPTASFKDALLEMSRKRLGLAVVCDENEQLKGVFTDGDLRRVLALLGGGA--LKKEVKDFMTLGPK 234 (272)
T ss_pred HHHHHCCCCCCCCEECCCCCEEEEEEEECCCCCEEEEEECCCCEEEEEECCHHHHHHHHHCCHH--CCCCHHHHCCCCCE
T ss_conf 6776406656782223677202102331378617999715552467871465999998816600--02312221068881
Q ss_pred EEEEECCCCHHH
Q ss_conf 378304535999
Q gi|254780426|r 239 TFIVDARTDLEE 250 (320)
Q Consensus 239 ~~~v~G~~~l~~ 250 (320)
T Consensus 235 ~~~n~~~~l~~A 246 (272)
T TIGR00393 235 TLKNSDELLVEA 246 (272)
T ss_pred EEECHHHHHHHH
T ss_conf 340145689999