HHsearch alignment for GI: 254780426 and conserved domain: TIGR03415
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=96.85 E-value=0.0015 Score=43.18 Aligned_cols=52 Identities=17% Similarity=0.290 Sum_probs=43.2
Q ss_pred HHCCCCEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHHHHH
Q ss_conf 851565797178851232343201356511654077662046675889999874
Q gi|254780426|r 166 NLIKNILFVPSSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVSVLMR 219 (320)
Q Consensus 166 ~~~r~~~~Vpe~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle~ivG 219 (320)
T Consensus 330 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~--~~v~~~g~l~G~i~~~~~l~~l~g 381 (382)
T TIGR03415 330 SLEAAPTVINPDTLMRDVLAARHRTGGA--ILLVENGRIVGVIGDDNIYHALLG 381 (382)
T ss_pred HHCCCCCEECCCCCHHHHHHHHHHCCCC--EEEECCCEEEEEEEHHHHHHHHHC
T ss_conf 3125773338989399999999858998--099059959999868999998627