HHsearch alignment for GI: 254780426 and conserved domain: cd02205
>cd02205 CBS_pair The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generali
Probab=99.10 E-value=4.7e-10 Score=85.71 Aligned_cols=110 Identities=22% Similarity=0.307 Sum_probs=92.9
Q ss_pred EEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHH-CCCCEEECC
Q ss_conf 2999863010367789798659817998418866422410299999876622356432233345767885-156579717
Q gi|254780426|r 98 SINAVEDKATVYEAMLMFEKYGRSWMPVYKNSLDNPRGMVHMRDVISYISHMYAKTNNINLNIQLSESNL-IKNILFVPS 176 (320)
Q Consensus 98 ~i~~i~~~~~~~e~~~~i~~~~~sR~PV~~~~~d~iiGiv~~kDll~~~~~~~~~~~~~~~~~~~~l~~~-~r~~~~Vpe 176 (320)
T Consensus 2 ~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~-~~~~G~it~~dl~~~~~~~~~~~~~-------~~~~~~~~~~~~v~~ 73 (113)
T cd02205 2 DVVTVSPDDTVAEALRLMLEHGISGLPVVDDD-GRLVGIVTERDLLRALAEGGLDPLV-------TVGDVMTRDVVTVSP 73 (113)
T ss_pred CCEEECCCCCHHHHHHHHHHCCCEEEEEECCC-CCEEEEEEHHHHHHHHHHCCCCCCC-------CEEEEEECCCEEEEE
T ss_conf 97796892989999999998398099999399-9599999889989887631574103-------304567505468973
Q ss_pred CCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHH
Q ss_conf 885123234320135651165407766204667588999
Q gi|254780426|r 177 SMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVS 215 (320)
Q Consensus 177 ~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle 215 (320)
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~Vvd~~~~~iG~vs~~di~~ 112 (113)
T cd02205 74 DTSLEEAAELMLEHGIRRLPVVDDEGRLVGIVTRSDILR 112 (113)
T ss_pred CCHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEHHHHHC
T ss_conf 211779999999849729999966997999998899746