HHsearch alignment for GI: 254780426 and conserved domain: cd04586
>cd04586 CBS_pair_BON_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain. BON is a putative phospholipid-binding domain found in a family of osmotic shock protection proteins. It is also found in some secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=99.47 E-value=2.5e-13 Score=107.19 Aligned_cols=118 Identities=17% Similarity=0.216 Sum_probs=96.3
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCC---------------CCCCCCC
Q ss_conf 1299986301036778979865981799841886642241029999987662235643---------------2233345
Q gi|254780426|r 97 VSINAVEDKATVYEAMLMFEKYGRSWMPVYKNSLDNPRGMVHMRDVISYISHMYAKTN---------------NINLNIQ 161 (320)
Q Consensus 97 ~~i~~i~~~~~~~e~~~~i~~~~~sR~PV~~~~~d~iiGiv~~kDll~~~~~~~~~~~---------------~~~~~~~ 161 (320)
T Consensus 2 ~~vitv~~~~tl~~a~~~m~~~~i~~lpVvd~~~-~lvGiit~~Dil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (135)
T cd04586 2 TDVVTVSPETSVAEAARLMLDNHISGLPVVDDDG-RLVGIVSEGDLLRRAELGTERRRARWLDLLAGAEELAAAFVRSHG 80 (135)
T ss_pred CCCEEECCCCCHHHHHHHHHHHCCCEEEEEECCC-EEEEEEEHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCCC
T ss_conf 9998999939399999999973996799990899-799999818976445415654114555430231034554304479
Q ss_pred CCHHHHC-CCCEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHH
Q ss_conf 7678851-565797178851232343201356511654077662046675889999
Q gi|254780426|r 162 LSESNLI-KNILFVPSSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVSV 216 (320)
Q Consensus 162 ~~l~~~~-r~~~~Vpe~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle~ 216 (320)
T Consensus 81 ~~V~~iM~~~~~~v~~~~~l~~~~~~m~~~~i~~lpVvd~-~~lvGiIt~~DilkA 135 (135)
T cd04586 81 RKVADVMTRPVVTVGEDTPLAEVAELMEEHRIKRVPVVRG-GRLVGIVSRADLLRA 135 (135)
T ss_pred CCHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEEEC-CEEEEEEEHHHHHCC
T ss_conf 8989957899879959795999999999759609999999-999999997996459