HHsearch alignment for GI: 254780426 and conserved domain: cd04597
>cd04597 CBS_pair_DRTGG_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a DRTGG domain upstream. The function of the DRTGG domain, named after its conserved residues, is unknown. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=97.67 E-value=3.3e-05 Score=54.02 Aligned_cols=76 Identities=16% Similarity=0.241 Sum_probs=60.1
Q ss_pred HHHCCCCCHHHHHHHHHHHCC--------CCEEEHHEEECCCEEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCC
Q ss_conf 997689898999999987304--------775764131200129998630103677897986598179984188664224
Q gi|254780426|r 64 ASLEGIFSETEKEIFNNILRF--------RKIRIDDIMISRVSINAVEDKATVYEAMLMFEKYGRSWMPVYKNSLDNPRG 135 (320)
Q Consensus 64 ~~~~G~i~~~E~~ii~~vl~l--------~~~~v~diMtPr~~i~~i~~~~~~~e~~~~i~~~~~sR~PV~~~~~d~iiG 135 (320)
T Consensus 28 ~~r~G~~n~et~~vL~-~f~~~~P~li~~v~~qV~DIm~--~~~vti~~~~sl~eA~~lM~e~~i~~LPVVD~~g-~l~G 103 (113)
T cd04597 28 AARLGEPNPQTRYVLE-YLGIEPPILLADVHPRVRDVIN--RKPVTARPNDPLREALNLMHEHNIRTLPVVDDDG-TPAG 103 (113)
T ss_pred EECCCCCCHHHHHHHH-HCCCCCCEECCCCCCHHHHHCC--CCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCC-EEEE
T ss_conf 7306899989999999-8499998002156505666313--7883419998299999999984998786988999-3999
Q ss_pred CEEHHHHH
Q ss_conf 10299999
Q gi|254780426|r 136 MVHMRDVI 143 (320)
Q Consensus 136 iv~~kDll 143 (320)
T Consensus 104 iIT~~DIA 111 (113)
T cd04597 104 IITLLDLA 111 (113)
T ss_pred EEEHHHHH
T ss_conf 98778743