HHsearch alignment for GI: 254780426 and conserved domain: cd04600

>cd04600 CBS_pair_HPP_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the HPP motif domain. These proteins are integral membrane proteins with four transmembrane spanning helices. The function of these proteins is uncertain, but they are thought to be transporters. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=99.57  E-value=2.1e-14  Score=114.22  Aligned_cols=119  Identities=14%  Similarity=0.198  Sum_probs=99.6

Q ss_pred             CEEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCC---CCCCCCCCCHHHHCC-CCE
Q ss_conf             1299986301036778979865981799841886642241029999987662235643---223334576788515-657
Q gi|254780426|r   97 VSINAVEDKATVYEAMLMFEKYGRSWMPVYKNSLDNPRGMVHMRDVISYISHMYAKTN---NINLNIQLSESNLIK-NIL  172 (320)
Q Consensus        97 ~~i~~i~~~~~~~e~~~~i~~~~~sR~PV~~~~~d~iiGiv~~kDll~~~~~~~~~~~---~~~~~~~~~l~~~~r-~~~  172 (320)
T Consensus         2 rdvvtv~~~~tl~~a~~~m~~~~~~~lpVvd~~g-~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~~v~~iM~~~~~   80 (124)
T cd04600           2 RDVVTVTPDTSLEEAWALLRRHRIKALPVVDGDR-RLVGIVTQRDLLRHARPDGRRPLRGRLRGRDKPETVGDIMSPPVV   80 (124)
T ss_pred             CCCEEECCCCCHHHHHHHHHHCCCCEEEEEECCC-CEEEEEEHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHCCCCCE
T ss_conf             8969989939799999999972997899995698-088885699999877504653101222105578898995779986


Q ss_pred             EECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHH
Q ss_conf             97178851232343201356511654077662046675889999
Q gi|254780426|r  173 FVPSSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVSV  216 (320)
Q Consensus       173 ~Vpe~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle~  216 (320)
T Consensus        81 ~v~~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGiIt~~Dil~A  124 (124)
T cd04600          81 TVRPDTPIAELVPLLADGGHHHVPVVDEDRRLVGIVTQTDLIAA  124 (124)
T ss_pred             EECCCCCHHHHHHHHHHCCCEEEEEEECCCEEEEEEEHHHHHCC
T ss_conf             99898979999999997793499999579989999978997469