HHsearch alignment for GI: 254780426 and conserved domain: cd04619
>cd04619 CBS_pair_6 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=98.15 E-value=2.3e-06 Score=61.59 Aligned_cols=69 Identities=14% Similarity=0.312 Sum_probs=42.9
Q ss_pred HHHHHHHHHHC----CCCEEEHHEEECCCEEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHHH
Q ss_conf 99999998730----4775764131200129998630103677897986598179984188664224102999998
Q gi|254780426|r 73 TEKEIFNNILR----FRKIRIDDIMISRVSINAVEDKATVYEAMLMFEKYGRSWMPVYKNSLDNPRGMVHMRDVIS 144 (320)
Q Consensus 73 ~E~~ii~~vl~----l~~~~v~diMtPr~~i~~i~~~~~~~e~~~~i~~~~~sR~PV~~~~~d~iiGiv~~kDll~ 144 (320)
T Consensus 41 Te~Di~r~~~~~~~~~~~~~V~~vMt--~~vitv~~~~~i~~a~~~M~~~~i~~lPVVD~~~-~~vGiit~~Dilk 113 (114)
T cd04619 41 TKTDVVRQMGRCGGPGCTAPVENVMT--RAVVSCRPGDLLHDVWQVMKQRGLKNIPVVDENA-RPLGVLNARDALK 113 (114)
T ss_pred EHHHHHHHHHHCCCCCCCCCHHHHCC--CCCEEECCCCCHHHHHHHHHHCCCCEEEEEECCC-EEEEEEEHHHEEC
T ss_conf 94999999873079866789999615--8988999989099999988876985889990799-5999999354542