HHsearch alignment for GI: 254780426 and conserved domain: cd04621
>cd04621 CBS_pair_8 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=99.47 E-value=3.1e-13 Score=106.58 Aligned_cols=118 Identities=19% Similarity=0.204 Sum_probs=96.6
Q ss_pred CEEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCCC----------------CCCCC
Q ss_conf 12999863010367789798659817998418866422410299999876622356432----------------23334
Q gi|254780426|r 97 VSINAVEDKATVYEAMLMFEKYGRSWMPVYKNSLDNPRGMVHMRDVISYISHMYAKTNN----------------INLNI 160 (320)
Q Consensus 97 ~~i~~i~~~~~~~e~~~~i~~~~~sR~PV~~~~~d~iiGiv~~kDll~~~~~~~~~~~~----------------~~~~~ 160 (320)
T Consensus 1 kdVitv~p~~tl~ea~~~m~~~~i~~lpVvd~~g-~lvGivT~~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (135)
T cd04621 1 EDIATVHPEHSLLHVVDEMEKNGVGRVIVVDDNG-KPVGVITYRDLAFAEFEDNERGLPKKSIKMKRKAGQKRYRYVKEV 79 (135)
T ss_pred CCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCC-EEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHCCCC
T ss_conf 9868989949799999999874997799995999-399999879988666314544310233333101002332101446
Q ss_pred CCCHHHHCC-CCEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHH
Q ss_conf 576788515-65797178851232343201356511654077662046675889999
Q gi|254780426|r 161 QLSESNLIK-NILFVPSSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVSV 216 (320)
Q Consensus 161 ~~~l~~~~r-~~~~Vpe~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle~ 216 (320)
T Consensus 80 ~~~v~diMt~~vitv~~d~~l~~a~~~M~~~~i~~lPVvd~-~~lvGiIt~~Dilre 135 (135)
T cd04621 80 PLVAEDIMTEEIITVSPNDDVVDAAKLMLEANISGLPVVDN-DNIVGVITKTDICRE 135 (135)
T ss_pred CCCHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEEEC-CEEEEEEEHHHHCCC
T ss_conf 88998938899889989893999999999719988999989-999999985881168