HHsearch alignment for GI: 254780426 and conserved domain: cd04627
>cd04627 CBS_pair_14 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=97.99 E-value=4.4e-05 Score=53.17 Aligned_cols=51 Identities=22% Similarity=0.306 Sum_probs=46.4
Q ss_pred CCCEEECCCCCHHHHHHHHHCCCCCCEEEEEC-CCCCEEEEEHHHHHHHHHH
Q ss_conf 56579717885123234320135651165407-7662046675889999874
Q gi|254780426|r 169 KNILFVPSSMLVSDLLTNIQESRIRMALVIDE-HGGTDGLVSYEDIVSVLMR 219 (320)
Q Consensus 169 r~~~~Vpe~~~l~~lL~~m~~~~~~~aiVvDE-~G~~~GiVTleDIle~ivG 219 (320)
T Consensus 1 ~Pfi~v~~~~sl~~a~~lm~~~~i~rlpVvd~~~g~lvGIiT~~dil~~l~~ 52 (123)
T cd04627 1 EPFIPVPSTASLFQAIEILGSGGIHRVAVTEEESGEVIGILSQRRLVEFLWE 52 (123)
T ss_pred CCCEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEHHHHHHHHHH
T ss_conf 9964848989299999999749977799995899949999997999999986