HHsearch alignment for GI: 254780426 and conserved domain: cd04635
>cd04635 CBS_pair_22 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=97.85 E-value=7.1e-05 Score=51.82 Aligned_cols=49 Identities=18% Similarity=0.195 Sum_probs=42.9
Q ss_pred CCCEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHHHH
Q ss_conf 5657971788512323432013565116540776620466758899998
Q gi|254780426|r 169 KNILFVPSSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVSVL 217 (320)
Q Consensus 169 r~~~~Vpe~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle~i 217 (320)
T Consensus 1 r~vitv~~d~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiit~~Dll~~~ 49 (122)
T cd04635 1 REPVTCTPDDPVSKVWDLMLESGFTGLPVVQKAGELIGIITRRDIIRAG 49 (122)
T ss_pred CCCEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEHHHHHHHH
T ss_conf 9999968929799999999971994899991898299999989987655