HHsearch alignment for GI: 254780426 and conserved domain: cd04801
>cd04801 CBS_pair_M50_like This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the metalloprotease peptidase M50. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=99.37 E-value=3.8e-12 Score=99.42 Aligned_cols=108 Identities=16% Similarity=0.222 Sum_probs=91.5
Q ss_pred EEEEEEECCCHHHHHHH-HHHCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHC---CCCEE
Q ss_conf 29998630103677897-986598179984188664224102999998766223564322333457678851---56579
Q gi|254780426|r 98 SINAVEDKATVYEAMLM-FEKYGRSWMPVYKNSLDNPRGMVHMRDVISYISHMYAKTNNINLNIQLSESNLI---KNILF 173 (320)
Q Consensus 98 ~i~~i~~~~~~~e~~~~-i~~~~~sR~PV~~~~~d~iiGiv~~kDll~~~~~~~~~~~~~~~~~~~~l~~~~---r~~~~ 173 (320)
T Consensus 2 dv~tv~~~~tl~e~~~~~~~~~~~~~~pVvd~~g-~l~Givt~~dl~~~~~~~~---------~~~~v~~v~~~~~~~~~ 71 (114)
T cd04801 2 DFPTVPAHLTLREFVREYVLGSNQRRFVVVDNEG-RYVGIISLADLRAIPTSQW---------AQTTVIQVMTPAAKLVT 71 (114)
T ss_pred CCEEECCCCCHHHHHHHHHHHCCCEEEEEECCCC-EEEEEEEHHHHHHHHHHCC---------CCCCHHHHCCCCCCCEE
T ss_conf 9558499995999999998507966899987899-7999999999875454025---------68847782102778758
Q ss_pred ECCCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHH
Q ss_conf 717885123234320135651165407766204667588999
Q gi|254780426|r 174 VPSSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVS 215 (320)
Q Consensus 174 Vpe~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle 215 (320)
T Consensus 72 v~~~~~l~~al~~m~~~~~~~LpVVd~~g~lvGiit~~Dilr 113 (114)
T cd04801 72 VLSEESLAEVLKLLEEQGLDELAVVEDSGQVIGLITEADLLR 113 (114)
T ss_pred ECCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEEHHHHHC
T ss_conf 999997999999999769867889947990999999788436