HHsearch alignment for GI: 254780426 and conserved domain: cd04803
>cd04803 CBS_pair_15 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.53 E-value=9.2e-14 Score=110.04 Aligned_cols=116 Identities=13% Similarity=0.265 Sum_probs=98.4
Q ss_pred EEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCC--CCCCCCCCCHHHHC-CCCEEEC
Q ss_conf 99986301036778979865981799841886642241029999987662235643--22333457678851-5657971
Q gi|254780426|r 99 INAVEDKATVYEAMLMFEKYGRSWMPVYKNSLDNPRGMVHMRDVISYISHMYAKTN--NINLNIQLSESNLI-KNILFVP 175 (320)
Q Consensus 99 i~~i~~~~~~~e~~~~i~~~~~sR~PV~~~~~d~iiGiv~~kDll~~~~~~~~~~~--~~~~~~~~~l~~~~-r~~~~Vp 175 (320)
T Consensus 3 vvtv~~~~tl~~a~~~m~~~~i~~lpVvd~~~-~lvGiit~~Dil~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~ 81 (122)
T cd04803 3 VVTLSEDDSLADAEELMREHRIRHLPVVNEDG-KLVGLLTQRDLLRAALSSLSDNGEESLTKERDVPVAEVMKTDVLTVT 81 (122)
T ss_pred CEEECCCCCHHHHHHHHHHCCCCEEEEECCCC-CEEEEEEHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHCCCCCEEEC
T ss_conf 19998969999999999974997899990898-68889659999999984376420121025358899996689986998
Q ss_pred CCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEEHHHHHH
Q ss_conf 7885123234320135651165407766204667588999
Q gi|254780426|r 176 SSMLVSDLLTNIQESRIRMALVIDEHGGTDGLVSYEDIVS 215 (320)
Q Consensus 176 e~~~l~~lL~~m~~~~~~~aiVvDE~G~~~GiVTleDIle 215 (320)
T Consensus 82 ~~~~l~~~~~~m~~~~~~~lpVvd~~~~lvGiiT~~Dilk 121 (122)
T cd04803 82 PDTPLREAAEIMVENKIGCLPVVDDKGTLVGIITRSDFLR 121 (122)
T ss_pred CCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHEEE
T ss_conf 9998999999998568509999947998999999515564