HHsearch alignment of GI: 254780427 and MMDB domain: 1xm5_A_
>1xm5_A (A:) Hypothetical UPF0054 protein YBEY; structural genomics, protein structure initiative, nysgxrc target T842, PFAM family UPF0054, PSI; 2.70A {Escherichia coli}
Probab=100.00 E-value=0 Score=295.18 Aligned_cols=150 Identities=36% Similarity=0.594 Sum_probs=124.5
Q ss_pred EEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHCCCCCCEEEECCCC
Q ss_conf 05888854852111135257999999999999743220146674389999857799999999985048985156632556
Q gi|254780427|r 11 LDLQIAVENALWGDEIHLRTLCEVVFAKAVSNLISKGYFVKENIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAF 90 (171)
Q Consensus 11 i~I~i~ie~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eisi~l~dd~~i~~LN~~yr~kd~~TDVLSFP~~~ 90 (171)
+.++|.+.+..|.... ... .+.+++..++... ...++|||.|||+++|++||++|||+|+||||||||+.+
T Consensus 4 ~~~~i~i~~~~~~~~~-~~~----~~~~~~~~~~~~~----~~~~eisi~~vdd~~i~~LN~~yr~~d~pTDVLSFp~~~ 74 (155)
T 1xm5_A 4 VILDLQLACEDNSGLP-EES----QFQTWLNAVIPQF----QEESEVTIRVVDTAESHSLNLTYRGKDKPTNVLSFPFEV 74 (155)
T ss_dssp EEEEEEECSSSCCSCC-CHH----HHHHHHHTTSHHH----HSEEEEEEEEECHHHHHHHHHHHHCCSSCCSEEEEECCC
T ss_pred EEEEEEEECCCCCCCC-CHH----HHHHHHHHHHHHC----CCCEEEEEEEECHHHHHHHHHHHHCCCCCCCEEEEECCC
T ss_conf 5999887437855888-999----9999999999836----898489999999899999999985458886458763447
Q ss_pred CCCCCCCCCCHHEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 67776565300204651888874466618989999999999989986388899889999999999999998688886447
Q gi|254780427|r 91 ASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIHGFLHLLGYDHVDDKDACVMEGLERSILEDLGINDPYEV 170 (171)
Q Consensus 91 ~~~~~~~~~~LGDIvIs~~~i~~eA~~~~~~~~~e~~~l~iHG~LHLlGydH~~~~~~~~M~~~E~~iL~~l~i~~PY~~ 170 (171)
... ....+|||||||+++|.+||.++|+++.+|+++|+|||+|||+||||+++++++.|+.+|+++|+.+|+++||..
T Consensus 75 ~~~--~~~~~LGDI~Is~~~~~~qA~~~~~s~~~el~~l~vHG~LHLlGyDH~~~~e~~~M~~~E~~iL~~lg~~~py~~ 152 (155)
T 1xm5_A 75 PPG--MEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIA 152 (155)
T ss_dssp CSS--CCCCEEEEEEEEHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred CCC--CCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 887--664434425664999998998809978897678889999997378889817999999999999998699998766
Q ss_pred C
Q ss_conf 9
Q gi|254780427|r 171 D 171 (171)
Q Consensus 171 ~ 171 (171)
+
T Consensus 153 ~ 153 (155)
T 1xm5_A 153 E 153 (155)
T ss_dssp -
T ss_pred C
T ss_conf 6