HHsearch results for GI: 254780427 and protein with PDBid: 1tvi_A
>1tvi_A Hypothetical UPF0054 protein TM1509; alpha + beta, mixed 4-stranded beta sheet, four helix bundle, structural genomics; NMR {Thermotoga maritima} SCOP: d.92.1.15
Probab=100.00 E-value=3e-42 Score=263.15 Aligned_cols=112 Identities=33% Similarity=0.560 Sum_probs=104.2
Q ss_pred CCEEEEEEEECHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHEEEEEHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 74389999857799999999985048985156632556677765653002046518888744666189899999999999
Q gi|254780427|r 53 NIVELSLVFTDSHRIETLNFEYRGIDKPTNVLSFPTAFASSDGCSSLMLGDIVLAYEIIEIEANVLGKEFENHLVHLIIH 132 (171)
Q Consensus 53 ~~~eisi~l~dd~~i~~LN~~yr~kd~~TDVLSFP~~~~~~~~~~~~~LGDIvIs~~~i~~eA~~~~~~~~~e~~~l~iH 132 (171)
+.++|||.|||+++|++||++||++|+||||||||+.+ ..++|||+||+++|.+||.++++++.+|+++|+||
T Consensus 52 ~~~~vsi~fv~~~~i~~LN~~yr~k~~~TDVLSFp~~~-------~~~lGdI~Is~e~i~~~A~~~~~s~~~el~~l~iH 124 (172)
T 1tvi_A 52 GDVHVNVILVSEDEIKELNQQFRGQDRPTDVLTFPLME-------EDVYGEIYVCPLIVEENAREFNNTFEKELLEVVIH 124 (172)
T ss_dssp SCCCCEEEECCHHHHHHHHHTTTCCCCCCSEECCCCCS-------SSCCSEEEECHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CCEEEEEEEECHHHHHHHHHHHHCCCCCCCEEEECCCC-------CCCCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 87699999988899999999995799998678857865-------21388499869999999999099899999999999
Q ss_pred HHHHHCCCCCCC-HHHHHHHHHHHHHHHHHC---CCCCCCCCC
Q ss_conf 899863888998-899999999999999986---888864479
Q gi|254780427|r 133 GFLHLLGYDHVD-DKDACVMEGLERSILEDL---GINDPYEVD 171 (171)
Q Consensus 133 G~LHLlGydH~~-~~~~~~M~~~E~~iL~~l---~i~~PY~~~ 171 (171)
|+|||+||||++ +++++.|+.+|+++|+++ +++|||.+.
T Consensus 125 GlLHLlGyDH~~~~~~~~~M~~~E~~il~~i~~e~~~nPy~~~ 167 (172)
T 1tvi_A 125 GILHLAGYDHEFEDKNSKEMFEKQKKYVEEVWGEWRSNPSEDS 167 (172)
T ss_dssp HHHHHHSCSSCCTTSCCHHHHHHHHHHHHHHHHHHTTSCSCSC
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 9999648899998789999999999999999840788866678