HHSEARCH alignment of GI: 254780429 and SCOP domain: d1okja1

Alignment

Probab=99.95  E-value=1.1e-28  Score=203.65  Aligned_cols=105  Identities=30%  Similarity=0.586  Sum_probs=96.7

Q ss_pred             CEEEEECCCHHHEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf             27886216801278999779813999999842268999899999999976099987866543037854320246689999
Q gi|254780429|r    2 IVLALDTTGADCSVAIYDSHAGRILGSYFKNLGRGHAEHLMPAIDYALKDSRLEVSQVDRVVTALGPGSFTGVRVSIAVA   81 (206)
Q Consensus         2 ~iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~GPGSFTGlRigia~a   81 (206)
                      +||+||||++.++|||++++  +++.+ .+..+|+|++.|+|+++++|++++++++|||.|+|++|||||||||||+++|
T Consensus         1 kiLaIdTS~~~~sval~~~~--~i~~~-~~~~~~~h~~~l~~~i~~~l~~~~~~~~di~~i~v~~GPGsfTglRig~s~a   77 (106)
T d1okja1           1 RILAIDTATEACSVALWNDG--TVNAH-FELCPREHTQRILPMVQDILTTSGTSLTDINALAYGRGPGSFTGVRIGIGIA   77 (106)
T ss_dssp             EEEEEECSSSEEEEEEEETT--EEEEE-EEECCSSTTTTHHHHHHHHHHHTTCCGGGCCEEEEEEESSCHHHHHHHHHHH
T ss_pred             CEEEEECCCCCEEEEEEECC--EEEEE-EEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCHHHHHHH
T ss_conf             99999977713299999999--99999-9975589999999999999986087500256788850367654205999999


Q ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf             9999732687110383899998752146
Q gi|254780429|r   82 RGISLVLKQPALGVGNLEVLARAHLDSH  109 (206)
Q Consensus        82 kgLa~~~~~pv~gvssle~la~~~~~~~  109 (206)
                      |||++++++|++||++|+++|++++..+
T Consensus        78 kgla~~~~ip~~~v~sl~~la~~~~~k~  105 (106)
T d1okja1          78 QGLALGAELPMIGVSTLMTMAQGAWRKN  105 (106)
T ss_dssp             HHHHHHTTCCEEEEEHHHHHHHHHHHHS
T ss_pred             HHHHHHCCCCEEEECHHHHHHHHHHHHC
T ss_conf             9999982999998687999999989854

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: YeaZ-like
domain: Hypothetical protein YeaZ
species: Escherichia coli [TaxId: 562]