HHSEARCH alignment of GI: 254780429 and SCOP domain: d1zc6a1

Alignment

Probab=93.46  E-value=0.12  Score=28.10  Aligned_cols=66  Identities=14%  Similarity=0.240  Sum_probs=49.7

Q ss_pred             CC-EEEEECCCHHHEEEEEECCCCEEEEEEEEECC------HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
Q ss_conf             92-78862168012789997798139999998422------689998999999999760999878665430378
Q gi|254780429|r    1 MI-VLALDTTGADCSVAIYDSHAGRILGSYFKNLG------RGHAEHLMPAIDYALKDSRLEVSQVDRVVTALG   67 (206)
Q Consensus         1 M~-iLaIdTs~~~~sval~~~~~~~~~~~~~~~~~------r~hs~~L~~~i~~lL~~~~~~~~~id~iav~~G   67 (206)
                      |+ +|+||--+..+.++|++.+ ++++.+.....+      ..--+.+...+++++++++++..++....++.|
T Consensus         3 m~y~lGID~GGT~tk~~l~d~~-G~il~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~ag~~~~~~~~~~~~~g   75 (114)
T d1zc6a1           3 IRYLIGVDGGGTGTRIRLHASD-GTPLAMAEGGASALSQGIAKSWQAVLSTLEAAFQQAGLPAAPASACAIGLG   75 (114)
T ss_dssp             CCEEEEEEECSSCEEEEEEETT-CCEEEEEEESCCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEEEE
T ss_pred             CCEEEEEECCCCEEEEEEECCC-CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCEEEEEEE
T ss_conf             6689999847010899999499-989999972688733499999999999999999982998322102499998

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: BadF/BadG/BcrA/BcrD-like
domain: Probable N-acetylglucosamine kinase CV2896
species: Chromobacterium violaceum [TaxId: 536]