RPSBLAST alignment of GI: 254780429 and protein with PDBid: 2pff
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688
Score = 38.6 bits (89), Expect = 0.001
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 34/106 (32%)
Query: 113 PI--MVLVSLFHQKVCCQKFSLDGVSCSDPVLLNYEQTR----SEVDNFEGEIVGSGLSA 166
PI VLVS+ + F G++ DP YE + SEV N G +G G+SA
Sbjct: 1011 PITLFVLVSV------VEAFIASGIT--DP----YEMYKYVHVSEVGNCSGSGMG-GVSA 1057
Query: 167 IRG----------IENDI-DHLPMDVLS----RLGITKSSPFPSPI 197
+RG ++NDI ++ +S L I+ S P +P+
Sbjct: 1058 LRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPV 1103