HHsearch alignment for GI: 254780430 and conserved domain: pfam08712
>pfam08712 Nfu_N Scaffold protein Nfu/NifU N terminal. This domain is found at the N terminus of NifU and NifU related proteins, and in the human Nfu protein. Both of these proteins are thought to be involved in the the assembly of iron-sulphur clusters.
Probab=99.95 E-value=6.9e-28 Score=194.98 Aligned_cols=86 Identities=63% Similarity=1.029 Sum_probs=83.6
Q ss_pred EECCCCCCHHHHHHHCCCEECCCCCEECCCHHHCCCCHHHHHHHHCCCCEEEEECCCEEEEEEC-CCCCHHHHHHHHHHH
Q ss_conf 0211488722435417975437886430696670134688987416881079980877998314-668212348999999
Q gi|254780430|r 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKD-QYDWEHLRPPVLGMI 81 (189)
Q Consensus 3 I~~e~TPNPn~lKFi~~~~i~~~g~~~f~~~~~a~~spLa~~Lf~i~GV~~Vfi~~nFITVtK~-~~eW~~i~p~I~~~I 81 (189)
T Consensus 1 I~~e~TPNPn~lKf~~~~~l~~~gs~~f~~~~~a~~spLa~~Lf~i~gV~~Vf~~~nFITVtK~~~~~W~~l~~~I~~~I 80 (87)
T pfam08712 1 IQTESTPNPNTLKFLPGKEVLPEGTFEFKNADEAEGSPLAQKLFKIPGVKSVFFGDDFITVTKADDADWDDLKPEVLEAI 80 (87)
T ss_pred CCCCCCCCCCCEEEECCCEECCCCCEEECCHHHCCCCHHHHHHHCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 94647989037678679764279867878978752687999984888803999858889997379999899999999999
Q ss_pred HHHHHCC
Q ss_conf 9997401
Q gi|254780430|r 82 MEHFISG 88 (189)
Q Consensus 82 ~~~l~~g 88 (189)
T Consensus 81 ~~~l~sG 87 (87)
T pfam08712 81 MEHLESG 87 (87)
T ss_pred HHHHHCC
T ss_conf 9999649