HHsearch results for GI: 254780430 and protein with PDBid: 2k1h_A
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Staphylococcus epidermidis atcc 12228}
Probab=99.90 E-value=1.4e-24 Score=172.97 Aligned_cols=83 Identities=24% Similarity=0.482 Sum_probs=75.5
Q ss_pred CEEECCCCCCHHHHHHHCCCEECCCCCEECCCHHHCCCCHHHHHHHHCCCCEEEEECCCEEEEEEC-CCCCHHHHHHHHH
Q ss_conf 910211488722435417975437886430696670134688987416881079980877998314-6682123489999
Q gi|254780430|r 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKD-QYDWEHLRPPVLG 79 (189)
Q Consensus 1 m~I~~e~TPNPn~lKFi~~~~i~~~g~~~f~~~~~a~~spLa~~Lf~i~GV~~Vfi~~nFITVtK~-~~eW~~i~p~I~~ 79 (189)
++|++|+|||||+|||++++.+..+|+.+|.+.++ ..+|||++||+++||++||++.|||||||+ +++|++|+|+|++
T Consensus 2 ~iI~ie~TPNPnalKFv~~~~l~~~~~~~~~~~~~-~~spLa~~LF~i~gV~~Vf~~~dFITVtK~~~~~W~~i~~~I~~ 80 (94)
T 2k1h_A 2 EIIAISETPNHNTMKVSLSEPRQDNSFTTYTAAQE-GQPEFINRLFEIEGVKSIFYVLDFISIDKEDNANWNELLPQIEN 80 (94)
T ss_dssp CCCCCBCCSSSSCEEEECCCCCTTCCCCEECCCCT-TSCHHHHHHHTSTTEEEEEEETTEEEEEECTTCCHHHHHHHHHH
T ss_pred CEEECCCCCCCCCEEEECCCEEECCCCEEECCCCC-CCCHHHHHHHCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHH
T ss_conf 77864568895777884597263487145064000-14999999867888347997399899984899998999999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780430|r 80 MIMEH 84 (189)
Q Consensus 80 ~I~~~ 84 (189)
++.+.
T Consensus 81 ~l~~~ 85 (94)
T 2k1h_A 81 TFAKS 85 (94)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 98550