BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780430|ref|YP_003064843.1| nitrogen fixation protein
[Candidatus Liberibacter asiaticus str. psy62]
(189 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780430|ref|YP_003064843.1| nitrogen fixation protein [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040107|gb|ACT56903.1| nitrogen fixation protein [Candidatus Liberibacter asiaticus str.
psy62]
Length = 189
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/189 (100%), Positives = 189/189 (100%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF
Sbjct: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR
Sbjct: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV
Sbjct: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
Query: 181 PEVKDIRTV 189
PEVKDIRTV
Sbjct: 181 PEVKDIRTV 189
>gi|315122122|ref|YP_004062611.1| nitrogen fixation protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495524|gb|ADR52123.1| nitrogen fixation protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 190
Score = 323 bits (828), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 156/190 (82%), Positives = 171/190 (90%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPGQVVLV G++HFSNAKEA ISPLASRIFSI GI SVY GYDF
Sbjct: 1 MFIQTEYTPNPATLKFIPGQVVLVRGSVHFSNAKEAGISPLASRIFSISGIVSVYLGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKL-DDMGSGDFIESDSAVVQ 119
ITV KD+YDWE L+P +LG+IMEHF+SGDPII NGGL + + DD+G GDF ESDS +VQ
Sbjct: 61 ITVAKDKYDWEQLKPLILGVIMEHFMSGDPIISNGGLDAVNVNDDLGEGDFSESDSVIVQ 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK+VLDNRVRPAVARDGGDIVFKGYRDGIVFLSM GACSGCPSA+ETLKYGV N+LNHF
Sbjct: 121 KIKDVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMMGACSGCPSATETLKYGVINLLNHF 180
Query: 180 VPEVKDIRTV 189
VPEVKDIRTV
Sbjct: 181 VPEVKDIRTV 190
>gi|325291785|ref|YP_004277649.1| scaffold protein Nfu/NifU [Agrobacterium sp. H13-3]
gi|325059638|gb|ADY63329.1| putative scaffold protein Nfu/NifU [Agrobacterium sp. H13-3]
Length = 187
Score = 244 bits (623), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 146/190 (76%), Gaps = 4/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL G F N +A+ SPLA R+F+IPG+ VYFG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGKVVLESGTAEFLNPAQAQASPLAERLFTIPGVTGVYFGFDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES-DSAVVQ 119
ITV KD +W+HL+P +LG IMEHF+SG PI+ ++ ++ G+F E+ D +V
Sbjct: 61 ITVTKDDAEWQHLKPAILGSIMEHFMSGRPIMGTAIAAEVSDEE---GEFFEAGDETIVA 117
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+LD RVRPAVA+DGGDI F+G+RDG VFL+M+GACSGCPS++ TLK+GV N+L HF
Sbjct: 118 TIKELLDTRVRPAVAQDGGDITFRGFRDGTVFLNMKGACSGCPSSTATLKHGVQNLLRHF 177
Query: 180 VPEVKDIRTV 189
VPEV+++ V
Sbjct: 178 VPEVREVEAV 187
>gi|222084688|ref|YP_002543217.1| nitrogen fixation protein [Agrobacterium radiobacter K84]
gi|221722136|gb|ACM25292.1| nitrogen fixation protein [Agrobacterium radiobacter K84]
Length = 188
Score = 243 bits (619), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 148/190 (77%), Gaps = 3/190 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VV+ G F +A EAE+SPLA+R+F IPG++ VYFGYDF
Sbjct: 1 MFIQTEATPNPATLKFLPGKVVMESGTAEFRSADEAEVSPLAARLFDIPGVSGVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI-ESDSAVVQ 119
I+V KD +W+HL+P +LG IMEHF+SG P++ + D SG+F E D+ +V
Sbjct: 61 ISVSKDDQEWQHLKPAILGSIMEHFMSGKPVMGAASVLSEAQD--ASGEFFDEGDATIVL 118
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA+DGGDI F+G+RDG V+L+M+G+C+GCPS++ TLK+G+ N+L HF
Sbjct: 119 TIKELLETRVRPAVAQDGGDITFRGFRDGKVYLNMKGSCAGCPSSTATLKHGIQNLLRHF 178
Query: 180 VPEVKDIRTV 189
VPEV+++ V
Sbjct: 179 VPEVQEVEAV 188
>gi|15887702|ref|NP_353383.1| hypothetical protein Atu0351 [Agrobacterium tumefaciens str. C58]
gi|15155261|gb|AAK86168.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 187
Score = 240 bits (612), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 114/189 (60%), Positives = 145/189 (76%), Gaps = 2/189 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL G + F NA +A+ SPLA R+F+IPG+ VYFG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGKVVLESGTVEFLNASQAQASPLAERLFTIPGVTGVYFGFDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
ITV KD +W+HL+P +LG IMEHF+SG PI+ G ++ D F E D +V
Sbjct: 61 ITVTKDDAEWQHLKPAILGSIMEHFMSGRPIM--GTAIAAEVSDEEGEFFEEGDETIVAT 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+LD RVRPAVA+DGGDI F+G+RDG VFL+M+GACSGCPS++ TLK+GV N+L HFV
Sbjct: 119 IKELLDTRVRPAVAQDGGDITFRGFRDGTVFLNMKGACSGCPSSTATLKHGVQNLLRHFV 178
Query: 181 PEVKDIRTV 189
PEV+++ V
Sbjct: 179 PEVREVEAV 187
>gi|227820624|ref|YP_002824594.1| putative scaffold protein Nfu/NifU [Sinorhizobium fredii NGR234]
gi|227339623|gb|ACP23841.1| putative scaffold protein Nfu/NifU [Sinorhizobium fredii NGR234]
Length = 188
Score = 240 bits (612), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 145/190 (76%), Gaps = 3/190 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ G F + +EA SPLA+R+FSIPG++ VYFGYD
Sbjct: 1 MFIQTEATPNPATLKFLPGKVVMENGTAEFRSEEEARTGSPLAARLFSIPGVSGVYFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K+ +W+HL+P VLG IMEHF+SG PI+ G + D + E D A+V
Sbjct: 61 FITVSKEGQEWQHLKPAVLGSIMEHFMSGQPIM--SGASRAEETDQEGEFYDEGDEAIVA 118
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+LD RVRPAVA+DGGDI F+G++DG VFL+M+GACSGCPS++ TL++GV N+L HF
Sbjct: 119 TIKELLDTRVRPAVAQDGGDITFRGFKDGTVFLNMKGACSGCPSSTATLRHGVQNLLRHF 178
Query: 180 VPEVKDIRTV 189
VPEV+ + +V
Sbjct: 179 VPEVESVESV 188
>gi|150395264|ref|YP_001325731.1| scaffold protein Nfu/NifU [Sinorhizobium medicae WSM419]
gi|150026779|gb|ABR58896.1| Scaffold protein Nfu/NifU [Sinorhizobium medicae WSM419]
Length = 188
Score = 240 bits (612), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 145/190 (76%), Gaps = 3/190 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ G F + +EA SPLA+R+FSIPGI VYFGYD
Sbjct: 1 MFIQTEATPNPATLKFLPGKVVMENGTAEFRSEEEALAGSPLAARLFSIPGITGVYFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K+ +W+HL+P +LG IMEHF+SG PI+ G + +D F E D A+V
Sbjct: 61 FITVSKEAQEWQHLKPAILGSIMEHFMSGQPIMSGAGRAEQLDED--EEFFDEGDEAIVA 118
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA+DGGDI F+G++DG VFL+M+GACSGCPS++ TL++GV N+L HF
Sbjct: 119 TIKELLETRVRPAVAQDGGDITFRGFKDGTVFLNMKGACSGCPSSTATLRHGVQNLLRHF 178
Query: 180 VPEVKDIRTV 189
VPEV+ + +V
Sbjct: 179 VPEVESVESV 188
>gi|86356038|ref|YP_467930.1| nitrogen fixation protein [Rhizobium etli CFN 42]
gi|86280140|gb|ABC89203.1| nitrogen fixation protein [Rhizobium etli CFN 42]
Length = 188
Score = 239 bits (611), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 109/188 (57%), Positives = 148/188 (78%), Gaps = 5/188 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPAT KF+PG+VV+ G F +A+EAE SPLA+R+F IPG+ VYFGYDF
Sbjct: 1 MFIQTEATPNPATQKFLPGKVVMENGTAEFRSAEEAEASPLAARLFDIPGVTGVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD--FIESDSAVV 118
I+V KD +W+HL+P +LG IMEHF+SG P++ G + +D+ +GD F E D ++V
Sbjct: 61 ISVSKDNAEWQHLKPAILGSIMEHFMSGKPVM---GDASILSEDVDAGDEFFDEGDESIV 117
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+L+ RVRPAVA+DGGDI F+G++DG V+L+M+G+CSGCPS++ TLK+GV N+L H
Sbjct: 118 LTIKELLETRVRPAVAQDGGDITFRGFKDGKVYLNMKGSCSGCPSSTATLKHGVQNLLRH 177
Query: 179 FVPEVKDI 186
FVPEV+++
Sbjct: 178 FVPEVQEV 185
>gi|15964154|ref|NP_384507.1| hypothetical protein SMc01119 [Sinorhizobium meliloti 1021]
gi|307301299|ref|ZP_07581061.1| Scaffold protein Nfu/NifU [Sinorhizobium meliloti BL225C]
gi|307317970|ref|ZP_07597407.1| Scaffold protein Nfu/NifU [Sinorhizobium meliloti AK83]
gi|15073330|emb|CAC41838.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|306896372|gb|EFN27121.1| Scaffold protein Nfu/NifU [Sinorhizobium meliloti AK83]
gi|306903755|gb|EFN34342.1| Scaffold protein Nfu/NifU [Sinorhizobium meliloti BL225C]
Length = 188
Score = 239 bits (610), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 145/190 (76%), Gaps = 3/190 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ G F + +EA SPLA+R+FSIPG+ VYFGYD
Sbjct: 1 MFIQTEATPNPATLKFLPGKVVMENGTAEFRSEEEALAGSPLAARLFSIPGVTGVYFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K+ +W+HL+P +LG IMEHF+SG PI+ G G + D F E D A+V
Sbjct: 61 FITVSKEAQEWQHLKPAILGSIMEHFMSGQPIM--SGAGRAEQTDEEDEFFDEGDEAIVA 118
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA+DGGDI F+G++DG VFL+M+GACSGCPS++ TL++GV N+L HF
Sbjct: 119 TIKELLETRVRPAVAQDGGDITFRGFKDGTVFLNMKGACSGCPSSTATLRHGVQNLLRHF 178
Query: 180 VPEVKDIRTV 189
VPEV+ + +V
Sbjct: 179 VPEVEAVESV 188
>gi|190890051|ref|YP_001976593.1| nitrogen fixation protein [Rhizobium etli CIAT 652]
gi|218509253|ref|ZP_03507131.1| nitrogen fixation protein [Rhizobium etli Brasil 5]
gi|190695330|gb|ACE89415.1| nitrogen fixation protein [Rhizobium etli CIAT 652]
Length = 188
Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 109/188 (57%), Positives = 146/188 (77%), Gaps = 5/188 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPAT KF+PG+VV+ G F +A EAE SPLA+R+F IPG+ VYFGYDF
Sbjct: 1 MFIQTEATPNPATQKFLPGKVVMENGTAEFRSAAEAEASPLAARLFEIPGVTGVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD--FIESDSAVV 118
I+V KD +W+HL+P +LG IMEHF+SG P++ G + +D +GD F E D ++V
Sbjct: 61 ISVSKDNAEWQHLKPAILGSIMEHFMSGKPVM---GDASILSEDADAGDEFFDEGDESIV 117
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+L+ RVRPAVA+DGGDI F+G++DG V+L+M+G+CSGCPS++ TLK+GV N+L H
Sbjct: 118 LTIKELLETRVRPAVAQDGGDITFRGFKDGKVYLNMKGSCSGCPSSTATLKHGVQNLLRH 177
Query: 179 FVPEVKDI 186
FVPEV+++
Sbjct: 178 FVPEVQEV 185
>gi|209547636|ref|YP_002279553.1| Scaffold protein Nfu/NifU [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533392|gb|ACI53327.1| Scaffold protein Nfu/NifU [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 188
Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 148/188 (78%), Gaps = 5/188 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPAT KF+PG+VV+ G F +A+EAE SPLA+R+F IPG+ VYFGYDF
Sbjct: 1 MFIQTEATPNPATQKFLPGKVVMENGTAEFRSAEEAEASPLAARLFEIPGVTGVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD--FIESDSAVV 118
I+V KD +W+HL+P +LG IMEHF+SG P++ G + +D+ +GD F E D ++V
Sbjct: 61 ISVSKDDAEWQHLKPAILGSIMEHFMSGKPVM---GDASILSEDVDAGDEFFDEGDESIV 117
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+L+ RVRPAVA+DGGDI F+G++DG V+L+M+G+C+GCPS++ TLK+GV N+L H
Sbjct: 118 LTIKELLETRVRPAVAQDGGDITFRGFKDGKVYLNMKGSCAGCPSSTATLKHGVQNLLRH 177
Query: 179 FVPEVKDI 186
FVPEV+++
Sbjct: 178 FVPEVQEV 185
>gi|218678782|ref|ZP_03526679.1| nitrogen fixation protein [Rhizobium etli CIAT 894]
Length = 188
Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 147/188 (78%), Gaps = 5/188 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPAT KF+PG+VV+ G F +A+EAE SPLA+R+F IPG+ VYFGYDF
Sbjct: 1 MFIQTEATPNPATQKFLPGKVVMENGTAEFRSAEEAEASPLAARLFEIPGVTGVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD--FIESDSAVV 118
I+V KD +W+HL+P +LG IMEHF+SG P++ G + +D +GD F E D ++V
Sbjct: 61 ISVSKDNAEWQHLKPAILGSIMEHFMSGKPVM---GDASILSEDADAGDEFFDEGDESIV 117
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+L+ RVRPAVA+DGGDI F+G++DG V+L+M+G+C+GCPS++ TLK+GV N+L H
Sbjct: 118 LTIKELLETRVRPAVAQDGGDITFRGFKDGKVYLNMKGSCAGCPSSTATLKHGVQNLLRH 177
Query: 179 FVPEVKDI 186
FVPEV+++
Sbjct: 178 FVPEVQEV 185
>gi|218461569|ref|ZP_03501660.1| Scaffold protein Nfu/NifU [Rhizobium etli Kim 5]
Length = 188
Score = 238 bits (607), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 147/188 (78%), Gaps = 5/188 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPAT KF+PG+VV+ G F +A+EA+ SPLA+R+F IPG+ VYFGYDF
Sbjct: 1 MFIQTEATPNPATQKFLPGKVVMENGTAEFRSAEEAQASPLAARLFEIPGVTGVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD--FIESDSAVV 118
I+V KD +W+HL+P +LG IMEHF+SG P++ G + +D +GD F E D ++V
Sbjct: 61 ISVSKDDAEWQHLKPAILGSIMEHFMSGKPVM---GDASILSEDADAGDEFFDEGDESIV 117
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+L+ RVRPAVA+DGGDI F+G++DG V+L+M+G+CSGCPS++ TLK+GV N+L H
Sbjct: 118 LTIKELLETRVRPAVAQDGGDITFRGFKDGKVYLNMKGSCSGCPSSTATLKHGVQNLLRH 177
Query: 179 FVPEVKDI 186
FVPEV+++
Sbjct: 178 FVPEVQEV 185
>gi|254470949|ref|ZP_05084352.1| nitrogen fixation protein [Pseudovibrio sp. JE062]
gi|211960091|gb|EEA95288.1| nitrogen fixation protein [Pseudovibrio sp. JE062]
Length = 186
Score = 237 bits (605), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 109/189 (57%), Positives = 146/189 (77%), Gaps = 3/189 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL EG F +A+EA ISPLA ++FSIPG+ ++FG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRVVLPEGTRDFRSAEEAAISPLAEKLFSIPGVVGIFFGHDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
ITV KD+ DW+H+RP +LG IME+F++ PI+ GD D+G F D V
Sbjct: 61 ITVTKDETDWQHMRPAILGAIMENFMANTPILKGEETGD---GDIGEEFFDAEDEETVTM 117
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+L+ RVRPAVA+DGGDI F+GYR+GIV+LSMRGAC+GCPS++ TL +G+ N++ HF+
Sbjct: 118 IKELLETRVRPAVAQDGGDITFRGYREGIVYLSMRGACAGCPSSTATLSHGIQNLMRHFI 177
Query: 181 PEVKDIRTV 189
PEV+++R +
Sbjct: 178 PEVQEVRQM 186
>gi|307942729|ref|ZP_07658074.1| putative NFU1 iron-sulfur cluster scaffold-like protein [Roseibium
sp. TrichSKD4]
gi|307773525|gb|EFO32741.1| putative NFU1 iron-sulfur cluster scaffold-like protein [Roseibium
sp. TrichSKD4]
Length = 186
Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 148/191 (77%), Gaps = 7/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL G F++ EA SPLA ++F +PG+A+++FGYDF
Sbjct: 1 MFIQTEATPNPATLKFLPGRVVLETGTYDFTSPTEAGASPLAEKLFQVPGVAAIFFGYDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE-SDSAVV 118
ITV K + DW+H++P +LG IME F+SG P++ +G + +D G+F E +D V
Sbjct: 61 ITVTKKEDTDWQHMKPAILGAIMEQFMSGQPVMASG-----QAEDTEEGEFFEEADQETV 115
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IK++LD RVRPAVA+DGGDI FKG+++GIV+LSMRGAC+GCPS++ TL++G+ N+L H
Sbjct: 116 TVIKDLLDTRVRPAVAQDGGDITFKGFKEGIVYLSMRGACAGCPSSTATLQHGIQNLLKH 175
Query: 179 FVPEVKDIRTV 189
FVPEV+++R +
Sbjct: 176 FVPEVQEVRPI 186
>gi|222147346|ref|YP_002548303.1| hypothetical protein Avi_0430 [Agrobacterium vitis S4]
gi|221734336|gb|ACM35299.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 186
Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/189 (56%), Positives = 143/189 (75%), Gaps = 3/189 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VV+ G F + + A SPLA ++F+IPG+ SV+FGYDF
Sbjct: 1 MFIQTESTPNPATLKFLPGKVVMDNGTAEFRDREAAMASPLAEKLFAIPGVTSVFFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV KD +W HL+P +LG IMEHF+SG PI+ + GD D+ F E D +V
Sbjct: 61 VTVTKDTAEWPHLKPAILGSIMEHFMSGAPIMGSAVAGDEASDEEF---FNEGDETIVAT 117
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+L+ RVRPAVA+DGGDI F+G+RDG VFL+M+G+C+GCPS++ TLK+GV N+L HF+
Sbjct: 118 IKELLETRVRPAVAQDGGDITFRGFRDGKVFLNMKGSCAGCPSSTATLKHGVQNLLRHFI 177
Query: 181 PEVKDIRTV 189
PEV+++ V
Sbjct: 178 PEVQEVEAV 186
>gi|118590483|ref|ZP_01547885.1| nitrogen-fixing NifU-like protein [Stappia aggregata IAM 12614]
gi|118436946|gb|EAV43585.1| nitrogen-fixing NifU-like protein [Stappia aggregata IAM 12614]
Length = 185
Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 150/190 (78%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL EG F + +A +SPLA ++F +PG+ +V+FG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRVVLPEGTYDFRSKADAGVSPLAQKLFDVPGVVAVFFGHDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES-DSAVVQ 119
+TV KD+ DW+H++P +LG+IME F+SG P++ + +++ G+F E+ D+ V
Sbjct: 61 VTVTKDETDWQHMKPAILGVIMEQFMSGQPVMATS-----EAENIEEGEFFEAGDADTVS 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA+DGGDI FKG+++GIV+LSMRGAC+GCPS++ TL++G+ N+L HF
Sbjct: 116 TIKELLETRVRPAVAQDGGDITFKGFKEGIVYLSMRGACAGCPSSTATLQHGIQNLLRHF 175
Query: 180 VPEVKDIRTV 189
VPEV+++R +
Sbjct: 176 VPEVEEVRPI 185
>gi|110636361|ref|YP_676569.1| nitrogen-fixing NifU-like [Mesorhizobium sp. BNC1]
gi|110287345|gb|ABG65404.1| nitrogen-fixing NifU-like protein [Chelativorans sp. BNC1]
Length = 189
Score = 234 bits (598), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/191 (56%), Positives = 144/191 (75%), Gaps = 5/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VVL EG F +A A+ +SPLA+R+F +PG+ V+FG+D
Sbjct: 1 MFIQTEATPNPATLKFLPGRVVLEEGTADFRSADSAQAVSPLAARLFEVPGVTGVFFGFD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI-ESDSAVV 118
FITV KD DW+HL+P +LG IMEHF+SG P++ D + S +F E+D +V
Sbjct: 61 FITVTKDGADWQHLKPAILGTIMEHFMSGQPVM---AANDGSERETASSEFYDEADEEIV 117
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+L+ RVRPAVA+DGGDI F+GY +G VFL M+GAC+GCPS++ TLK+G+ N+L+H
Sbjct: 118 TTIKELLETRVRPAVAQDGGDITFRGYENGTVFLHMKGACAGCPSSTATLKHGIQNLLHH 177
Query: 179 FVPEVKDIRTV 189
FVPEV+ + V
Sbjct: 178 FVPEVQQVEQV 188
>gi|241202790|ref|YP_002973886.1| Scaffold protein Nfu/NifU [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240856680|gb|ACS54347.1| Scaffold protein Nfu/NifU [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 188
Score = 234 bits (597), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 145/188 (77%), Gaps = 5/188 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPAT KF+PG+VV+ G F + +EA+ SPLA+R+F I G+ VYFGYDF
Sbjct: 1 MFIQTEATPNPATQKFLPGKVVMENGTAEFRSTEEAQASPLAARLFEISGVTGVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD--FIESDSAVV 118
I+V KD DW+HL+P +LG IMEHF+SG P++ G + +D +GD F E D ++V
Sbjct: 61 ISVSKDNADWQHLKPAILGSIMEHFMSGKPVM---GDASILSEDADAGDEFFDEGDESIV 117
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+L+ RVRPAVA+DGGDI F+G++DG V+L+M+G+C+GCPS++ TLK+GV N+L H
Sbjct: 118 LTIKELLETRVRPAVAQDGGDITFRGFKDGKVYLNMKGSCAGCPSSTATLKHGVQNLLRH 177
Query: 179 FVPEVKDI 186
FVPEV+++
Sbjct: 178 FVPEVQEV 185
>gi|49476032|ref|YP_034073.1| hypothetical protein BH13490 [Bartonella henselae str. Houston-1]
gi|49238840|emb|CAF28122.1| hypothetical protein BH13490 [Bartonella henselae str. Houston-1]
Length = 192
Score = 231 bits (590), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 142/184 (77%), Gaps = 1/184 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG VVL EG + F +++EA + SPLA+++F+IP + V+FGYD
Sbjct: 1 MFIQTETTPNPATLKFLPGCVVLSEGVLEFRDSEEAAKNSPLAAKLFNIPNVNGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K + +W+HL+P +LG IMEHF+SGDP+I+ + + + E D+ +V
Sbjct: 61 FITVSKKEGEWQHLKPAILGTIMEHFLSGDPVINTNATRQAQTHALNEEFYNEKDADIVL 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ R+RPAVA DGGDI F+G+ +GIV+L+MRGAC+GCPS++ TLK+G+ N+L HF
Sbjct: 121 TIKELLETRIRPAVANDGGDITFRGFENGIVYLNMRGACAGCPSSTATLKHGIENLLRHF 180
Query: 180 VPEV 183
+PEV
Sbjct: 181 IPEV 184
>gi|319779939|ref|YP_004139415.1| Scaffold protein Nfu/NifU [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317165827|gb|ADV09365.1| Scaffold protein Nfu/NifU [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 189
Score = 231 bits (588), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 142/191 (74%), Gaps = 5/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+ VLVEG F +A A + SPLA R+F IPG+ V+FGYD
Sbjct: 1 MFIQTESTPNPATLKFLPGKEVLVEGTADFRDADSAAVASPLAGRLFEIPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE-SDSAVV 118
FITV KD DW+HL+P +LG IMEHF+SG P++ G + +G+F + +D +V
Sbjct: 61 FITVTKDGPDWQHLKPAILGAIMEHFMSGAPVMAKAGPA---AETSQTGEFYDKADEELV 117
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD RVRPAVA+DGGDI F+G+ +G VFL M+GAC+GCPS++ TLK+G+ N+L H
Sbjct: 118 ITIKELLDTRVRPAVAQDGGDITFRGFENGTVFLHMKGACAGCPSSTATLKHGIQNLLRH 177
Query: 179 FVPEVKDIRTV 189
FVPEV+ + V
Sbjct: 178 FVPEVQQVEQV 188
>gi|328545933|ref|YP_004306042.1| nitrogen-fixing NifU-like protein [polymorphum gilvum SL003B-26A1]
gi|326415673|gb|ADZ72736.1| Nitrogen-fixing NifU-like protein [Polymorphum gilvum SL003B-26A1]
Length = 185
Score = 230 bits (587), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 146/190 (76%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL +G F ++ EA SPLA ++F++PG+ +V+FG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRVVLADGTYDFRSSDEAGASPLAEKLFAVPGVVAVFFGHDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES-DSAVVQ 119
ITV KD DW+H++P +LG IME F+SG P++ + + G +F +S D V
Sbjct: 61 ITVTKDDTDWQHMKPAILGAIMEQFMSGTPVMRSAA-----VQAGGEDEFFDSDDEETVT 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IK++L+ RVRPAVA+DGGDI FKG+++G+V+LSMRGAC+GCPS++ TL++G+ N+L HF
Sbjct: 116 VIKDLLETRVRPAVAQDGGDITFKGFKEGVVYLSMRGACAGCPSSTATLQHGIQNLLRHF 175
Query: 180 VPEVKDIRTV 189
VPEV+++R +
Sbjct: 176 VPEVEEVRAI 185
>gi|260462744|ref|ZP_05810949.1| Scaffold protein Nfu/NifU [Mesorhizobium opportunistum WSM2075]
gi|259031388|gb|EEW32659.1| Scaffold protein Nfu/NifU [Mesorhizobium opportunistum WSM2075]
Length = 189
Score = 230 bits (586), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 108/191 (56%), Positives = 142/191 (74%), Gaps = 5/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+ VL+EG F +A A + SPLA R+F IPG+ V+FGYD
Sbjct: 1 MFIQTESTPNPATLKFLPGKEVLLEGTADFRDADSAAVASPLAGRLFEIPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE-SDSAVV 118
FITV KD DW+HL+P +LG IMEHF+SG P++ G + +G+F + +D +V
Sbjct: 61 FITVTKDGPDWQHLKPAILGAIMEHFMSGAPVMAKAGPA---AETSQTGEFYDKADEELV 117
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD RVRPAVA+DGGDI F+G+ +G VFL M+GAC+GCPS++ TLK+G+ N+L H
Sbjct: 118 ITIKELLDTRVRPAVAQDGGDITFRGFENGTVFLHMKGACAGCPSSTATLKHGIQNLLRH 177
Query: 179 FVPEVKDIRTV 189
FVPEV+ + V
Sbjct: 178 FVPEVQQVEQV 188
>gi|13474434|ref|NP_106002.1| hypothetical protein mll5315 [Mesorhizobium loti MAFF303099]
gi|14025187|dbj|BAB51788.1| mll5315 [Mesorhizobium loti MAFF303099]
Length = 189
Score = 229 bits (583), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/191 (56%), Positives = 141/191 (73%), Gaps = 5/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+ VL+EG F +A A SPLA R+F IPG+ V+FGYD
Sbjct: 1 MFIQTESTPNPATLKFLPGKEVLLEGTADFRDADSAATASPLAGRLFEIPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE-SDSAVV 118
FITV KD DW+HL+P +LG IMEHF+SG P++ G + +G+F + +D +V
Sbjct: 61 FITVTKDGPDWQHLKPAILGAIMEHFMSGAPVMAKSGPA---AETSQTGEFYDKADEELV 117
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD RVRPAVA+DGGDI F+G+ +G VFL M+GAC+GCPS++ TLK+G+ N+L H
Sbjct: 118 ITIKELLDTRVRPAVAQDGGDITFRGFENGTVFLHMKGACAGCPSSTATLKHGIQNLLRH 177
Query: 179 FVPEVKDIRTV 189
FVPEV+ + V
Sbjct: 178 FVPEVQQVEQV 188
>gi|319409218|emb|CBI82862.1| NifU-related protein [Bartonella schoenbuchensis R1]
Length = 196
Score = 228 bits (581), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 140/184 (76%), Gaps = 1/184 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VVL +G + F N+KEA + SPLA+++F+IP ++SV G+D
Sbjct: 1 MFIQTETTPNPATLKFLPGRVVLAKGVLEFHNSKEADQNSPLAAKLFTIPNVSSVLLGHD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FI V K+ +W+HL+P +LG IMEHF+S DP + N + + + E D+ +V
Sbjct: 61 FIAVTKNDGEWQHLKPAILGTIMEHFLSNDPTVINDATLQTQAPEAYEEFYDEKDADIVM 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA DGGDI F+G+ DGIV+L+MRGAC+GCPS++ TLK+G+ N+L HF
Sbjct: 121 TIKEILETRVRPAVANDGGDITFRGFEDGIVYLNMRGACAGCPSSTATLKHGIENLLRHF 180
Query: 180 VPEV 183
+PEV
Sbjct: 181 IPEV 184
>gi|153007498|ref|YP_001368713.1| scaffold protein Nfu/NifU [Ochrobactrum anthropi ATCC 49188]
gi|151559386|gb|ABS12884.1| Scaffold protein Nfu/NifU [Ochrobactrum anthropi ATCC 49188]
Length = 190
Score = 228 bits (581), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 140/190 (73%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ EG F +A A SPLA+++FS+PG+ V+FGYD
Sbjct: 1 MFIQTETTPNPATLKFLPGKVVMPEGTADFRDASTAGNTSPLAAKLFSVPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K+ +W+HL+P +LG IMEHF+SG P + D F E+D+ V+
Sbjct: 61 FITVTKEDGEWQHLKPAILGTIMEHFMSGAPAMAGNSNADAAAAHGEEEFFDEADAETVE 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ RVRPAVA+DGGDI F+G+ +G VFL+M+GACSGCPS++ TLK+G+ N+L HF
Sbjct: 121 IIKELIETRVRPAVAQDGGDITFRGFENGTVFLNMKGACSGCPSSTATLKHGIQNLLRHF 180
Query: 180 VPEVKDIRTV 189
VPEV+ + +
Sbjct: 181 VPEVQQVEQI 190
>gi|239830990|ref|ZP_04679319.1| Scaffold protein Nfu/NifU [Ochrobactrum intermedium LMG 3301]
gi|239823257|gb|EEQ94825.1| Scaffold protein Nfu/NifU [Ochrobactrum intermedium LMG 3301]
Length = 211
Score = 227 bits (578), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 139/190 (73%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ EG F + A SPLA+++FS+PG+ V+FGYD
Sbjct: 22 MFIQTETTPNPATLKFLPGKVVMPEGTADFRDPSTAGNTSPLAAKLFSVPGVTGVFFGYD 81
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV KD +W+HL+P +LG IMEHF+SG P + D F E+D+ V+
Sbjct: 82 FITVTKDDGEWQHLKPAILGTIMEHFMSGAPAMAGNSNADAAAAHGDEEFFDEADAETVE 141
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ RVRPAVA+DGGDI F+G+ +G VFL+M+GACSGCPS++ TLK+G+ N+L HF
Sbjct: 142 IIKELIETRVRPAVAQDGGDITFRGFENGTVFLNMKGACSGCPSSTATLKHGIQNLLRHF 201
Query: 180 VPEVKDIRTV 189
VPEV+ + +
Sbjct: 202 VPEVQQVEQI 211
>gi|254503238|ref|ZP_05115389.1| Scaffold protein Nfu/NifU N terminal domain protein [Labrenzia
alexandrii DFL-11]
gi|222439309|gb|EEE45988.1| Scaffold protein Nfu/NifU N terminal domain protein [Labrenzia
alexandrii DFL-11]
Length = 185
Score = 226 bits (576), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 146/189 (77%), Gaps = 4/189 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL EG F + +A SPLA ++F +PG+A+V+FG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRVVLPEGTYDFRSKADAGASPLAEKLFDVPGVAAVFFGHDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV KD DW+H++P +LG+IME F+SG P+++ G D++ + E+ V
Sbjct: 61 VTVTKDDTDWQHMKPAILGVIMEQFMSGQPVMNAGESEDIEEGEFFEEGDQET----VAT 116
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+L+ RVRPAVA+DGGDI FKG+++GIV+LSMRGAC+GCPS++ TL++G+ N+L HFV
Sbjct: 117 IKELLETRVRPAVAQDGGDITFKGFKEGIVYLSMRGACAGCPSSTATLQHGIQNLLRHFV 176
Query: 181 PEVKDIRTV 189
PEV+++R +
Sbjct: 177 PEVEEVRPI 185
>gi|116250169|ref|YP_766007.1| nifU iron-sulphur cluster scaffold protein [Rhizobium leguminosarum
bv. viciae 3841]
gi|115254817|emb|CAK05891.1| putative nifU iron-sulphur cluster scaffold protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 188
Score = 225 bits (574), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 141/186 (75%), Gaps = 1/186 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPAT KF+PG+VV+ G F + +EA+ SPLA+R+F I G+ VYFGYDF
Sbjct: 1 MFIQTEATPNPATQKFLPGKVVMENGTAEFRSTEEAQASPLAARLFEISGVTGVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
I+V KD DW+HL+P +LG IMEHF+SG P++ + + D F E D ++V
Sbjct: 61 ISVSKDNADWQHLKPAILGSIMEHFMSGKPVMGDASILSEDADAD-DEFFDEGDESIVLT 119
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+L+ RVRPAVA+DGGDI F+G++DG V+L+M+G+C+GCPS++ TLK+GV N+L HFV
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDGKVYLNMKGSCAGCPSSTATLKHGVQNLLRHFV 179
Query: 181 PEVKDI 186
PEV+++
Sbjct: 180 PEVQEV 185
>gi|148251664|ref|YP_001236249.1| putative nifU protein [Bradyrhizobium sp. BTAi1]
gi|146403837|gb|ABQ32343.1| putative nifU protein [Bradyrhizobium sp. BTAi1]
Length = 189
Score = 225 bits (573), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 101/187 (54%), Positives = 143/187 (76%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+VVL G + FS+ + A SPLA R+F+I G+ V++G DF
Sbjct: 1 MFIQTEATPNPATLKFIPGRVVLPSGTMEFSSREAAARSPLAERLFAIGGVTGVFYGADF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
ITV K+ +W+HL+P +LG IMEH++SG P++ +G + D + E+D+ V
Sbjct: 61 ITVTKNDGEWQHLKPAILGAIMEHYMSGAPLLADGSAANDDATDEDDEFYDEADTETVGM 120
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IK+++++RVRPAVA DGGDI F+G++DGIV+L+M+GACSGCPS++ TL++G+ N+L HFV
Sbjct: 121 IKDLIESRVRPAVANDGGDITFRGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKHFV 180
Query: 181 PEVKDIR 187
PEV ++R
Sbjct: 181 PEVVEVR 187
>gi|240850980|ref|YP_002972380.1| nitrogen fixation protein [Bartonella grahamii as4aup]
gi|240268103|gb|ACS51691.1| nitrogen fixation protein [Bartonella grahamii as4aup]
Length = 192
Score = 224 bits (571), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 100/184 (54%), Positives = 139/184 (75%), Gaps = 1/184 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VVL EG + F + +EA + SPLA+++F+IP I V+ GYD
Sbjct: 1 MFIQTETTPNPATLKFLPGRVVLSEGVLEFRDPEEAAKNSPLAAKLFNIPNINGVFLGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K + +W+HL+P +LG IMEHF+S +P+I + + + E D+ +V
Sbjct: 61 FITVSKKEGEWQHLKPVILGTIMEHFLSNEPVITTNATIQAQTHALNEEFYDEKDADIVL 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ R+RPAVA DGGDI F+G+ +GIV+L+MRGAC+GCPS++ TLK+G+ N+L HF
Sbjct: 121 TIKELLETRIRPAVANDGGDITFRGFENGIVYLNMRGACAGCPSSTATLKHGIENLLRHF 180
Query: 180 VPEV 183
+PEV
Sbjct: 181 IPEV 184
>gi|225626680|ref|ZP_03784719.1| NifU-related protein [Brucella ceti str. Cudo]
gi|254707168|ref|ZP_05168996.1| NifU-related protein [Brucella pinnipedialis M163/99/10]
gi|254709289|ref|ZP_05171100.1| NifU-related protein [Brucella pinnipedialis B2/94]
gi|254713288|ref|ZP_05175099.1| NifU-related protein [Brucella ceti M644/93/1]
gi|254716359|ref|ZP_05178170.1| NifU-related protein [Brucella ceti M13/05/1]
gi|256030812|ref|ZP_05444426.1| NifU-related protein [Brucella pinnipedialis M292/94/1]
gi|256158837|ref|ZP_05456694.1| NifU-related protein [Brucella ceti M490/95/1]
gi|256254218|ref|ZP_05459754.1| NifU-related protein [Brucella ceti B1/94]
gi|260169716|ref|ZP_05756527.1| NifU-related protein [Brucella sp. F5/99]
gi|261218142|ref|ZP_05932423.1| scaffold protein Nfu/NifU [Brucella ceti M13/05/1]
gi|261221368|ref|ZP_05935649.1| scaffold protein Nfu/NifU [Brucella ceti B1/94]
gi|261314644|ref|ZP_05953841.1| scaffold protein Nfu/NifU [Brucella pinnipedialis M163/99/10]
gi|261316798|ref|ZP_05955995.1| scaffold protein Nfu/NifU [Brucella pinnipedialis B2/94]
gi|261321011|ref|ZP_05960208.1| scaffold protein Nfu/NifU [Brucella ceti M644/93/1]
gi|261759255|ref|ZP_06002964.1| nitrogen-fixing NifU [Brucella sp. F5/99]
gi|265987868|ref|ZP_06100425.1| scaffold protein Nfu/NifU [Brucella pinnipedialis M292/94/1]
gi|265997328|ref|ZP_06109885.1| scaffold protein Nfu/NifU [Brucella ceti M490/95/1]
gi|225618337|gb|EEH15380.1| NifU-related protein [Brucella ceti str. Cudo]
gi|260919952|gb|EEX86605.1| scaffold protein Nfu/NifU [Brucella ceti B1/94]
gi|260923231|gb|EEX89799.1| scaffold protein Nfu/NifU [Brucella ceti M13/05/1]
gi|261293701|gb|EEX97197.1| scaffold protein Nfu/NifU [Brucella ceti M644/93/1]
gi|261296021|gb|EEX99517.1| scaffold protein Nfu/NifU [Brucella pinnipedialis B2/94]
gi|261303670|gb|EEY07167.1| scaffold protein Nfu/NifU [Brucella pinnipedialis M163/99/10]
gi|261739239|gb|EEY27235.1| nitrogen-fixing NifU [Brucella sp. F5/99]
gi|262551796|gb|EEZ07786.1| scaffold protein Nfu/NifU [Brucella ceti M490/95/1]
gi|264660065|gb|EEZ30326.1| scaffold protein Nfu/NifU [Brucella pinnipedialis M292/94/1]
Length = 190
Score = 224 bits (571), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 140/190 (73%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ EG F + AE SPLA+++F++PG+ V+FGYD
Sbjct: 1 MFIQTETTPNPATLKFLPGKVVMPEGTADFRDPASAENTSPLAAKLFAVPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K+ +W+HL+P +LG IMEHF+SG P + D F E+D+ +V+
Sbjct: 61 FITVTKEDGEWQHLKPAILGTIMEHFMSGAPAMAGNANADAAAAHSEEEFFDEADTEIVE 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ RVRPAVA+DGGDI F+G+ +G VFL M+GACSGCPS++ TLK+G+ N+L HF
Sbjct: 121 TIKELIETRVRPAVAQDGGDITFRGFENGTVFLHMKGACSGCPSSTATLKHGIQNLLRHF 180
Query: 180 VPEVKDIRTV 189
VPEV+ + +
Sbjct: 181 VPEVQQVEQI 190
>gi|115522240|ref|YP_779151.1| NifU domain-containing protein [Rhodopseudomonas palustris BisA53]
gi|115516187|gb|ABJ04171.1| nitrogen-fixing NifU domain protein [Rhodopseudomonas palustris
BisA53]
Length = 188
Score = 224 bits (570), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 145/192 (75%), Gaps = 7/192 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL G + FS+ A SPLA R+F +PG+ V++G DF
Sbjct: 1 MFIQTEPTPNPATLKFLPGRAVLDSGTMEFSDRAAAARSPLAERLFEVPGVTGVFYGLDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLG--DMKLDDMGSGDFIE-SDSAV 117
++V KD DW+HL+P +LG IMEHF+SG+P++ +G + D DD +F E +D+
Sbjct: 61 VSVTKDDGDWQHLKPAILGAIMEHFMSGEPLMADGRVDGEDASEDD----EFFEKADTET 116
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IK++++ RVRPAVA DGGDI+F+G++DGIV+L MRGACSGCPS++ TL++G+ N+L
Sbjct: 117 VVIIKDLIETRVRPAVANDGGDIIFRGFKDGIVYLHMRGACSGCPSSTATLQHGIQNLLK 176
Query: 178 HFVPEVKDIRTV 189
HFVPEV ++R +
Sbjct: 177 HFVPEVVEVRPI 188
>gi|163868796|ref|YP_001610020.1| NifU-related protein [Bartonella tribocorum CIP 105476]
gi|161018467|emb|CAK02025.1| NifU-related protein [Bartonella tribocorum CIP 105476]
Length = 192
Score = 224 bits (570), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 99/184 (53%), Positives = 138/184 (75%), Gaps = 1/184 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VVL EG + F + +EA + SPLA+++F+IP + V+ GYD
Sbjct: 1 MFIQTETTPNPATLKFLPGRVVLSEGVLEFRDREEAAKNSPLAAKLFNIPNVNGVFLGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K + +W+HL+P +LG IMEHF+S +P+I + + E D+ +V
Sbjct: 61 FITVSKKEGEWQHLKPVILGTIMEHFLSNEPVITTNATTQAHAHALNEEFYDEKDADIVL 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ R+RPAVA DGGDI F+G+ +GIV+L+MRGAC+GCPS++ TLK+G+ N+L HF
Sbjct: 121 TIKELLETRIRPAVANDGGDITFRGFENGIVYLNMRGACAGCPSSTATLKHGIENLLRHF 180
Query: 180 VPEV 183
+PEV
Sbjct: 181 IPEV 184
>gi|17988091|ref|NP_540725.1| NifU protein [Brucella melitensis bv. 1 str. 16M]
gi|256045931|ref|ZP_05448803.1| NifU protein [Brucella melitensis bv. 1 str. Rev.1]
gi|260563213|ref|ZP_05833699.1| nitrogen-fixing NifU [Brucella melitensis bv. 1 str. 16M]
gi|265992342|ref|ZP_06104899.1| scaffold protein Nfu/NifU [Brucella melitensis bv. 1 str. Rev.1]
gi|17983843|gb|AAL52989.1| nifu protein [Brucella melitensis bv. 1 str. 16M]
gi|260153229|gb|EEW88321.1| nitrogen-fixing NifU [Brucella melitensis bv. 1 str. 16M]
gi|263003408|gb|EEZ15701.1| scaffold protein Nfu/NifU [Brucella melitensis bv. 1 str. Rev.1]
Length = 190
Score = 224 bits (570), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 140/190 (73%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ EG F + AE SPLA+++F++PG+ V+FGYD
Sbjct: 1 MFIQTETTPNPATLKFLPGKVVMPEGTADFRDPASAENTSPLAAKLFAVPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K+ +W+HL+P +LG IMEHF+SG P + D F E+D+ +V+
Sbjct: 61 FITVTKEDGEWQHLKPAILGTIMEHFMSGAPAMAGNANADAAAAHGEEEFFDEADTEIVE 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ RVRPAVA+DGGDI F+G+ +G VFL M+GACSGCPS++ TLK+GV N+L HF
Sbjct: 121 TIKELIETRVRPAVAQDGGDITFRGFENGTVFLHMKGACSGCPSSTATLKHGVQNLLRHF 180
Query: 180 VPEVKDIRTV 189
VPEV+ + +
Sbjct: 181 VPEVQQVEQI 190
>gi|163842411|ref|YP_001626815.1| HIRA-interacting protein 5 [Brucella suis ATCC 23445]
gi|163673134|gb|ABY37245.1| HIRA-interacting protein 5 [Brucella suis ATCC 23445]
Length = 190
Score = 223 bits (569), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 140/190 (73%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ EG F + AE SPLA+++F++PG+ V+FGYD
Sbjct: 1 MFIQTETTPNPATLKFLPGKVVMPEGTADFRDPPSAENTSPLAAKLFAVPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K+ +W+HL+P +LG IMEHF+SG P + D F E+D+ +V+
Sbjct: 61 FITVTKEHGEWQHLKPAILGTIMEHFMSGAPAMAGNANADAAAAHGEEEFFDEADTEIVE 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ RVRPAVA+DGGDI F+G+ +G VFL M+GACSGCPS++ TLK+G+ N+L HF
Sbjct: 121 TIKELIETRVRPAVAQDGGDITFRGFENGTVFLHMKGACSGCPSSTATLKHGIQNLLRHF 180
Query: 180 VPEVKDIRTV 189
VPEV+ + +
Sbjct: 181 VPEVQQVEQI 190
>gi|90421987|ref|YP_530357.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris BisB18]
gi|90104001|gb|ABD86038.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris BisB18]
Length = 188
Score = 223 bits (569), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 144/190 (75%), Gaps = 3/190 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+VVL G + F++ A SPLA RIF +PG+ V++G DF
Sbjct: 1 MFIQTEPTPNPATLKFIPGRVVLDSGTMEFNDRATAARSPLAERIFEVPGVTGVFYGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGL-GDMKLDDMGSGDFIESDSAVVQ 119
+TV KD DW+HL+P +LG IMEH++SG+P++ +G + GD +D F ++D+ V
Sbjct: 61 VTVTKDDSDWQHLKPSILGAIMEHYMSGEPLMADGRVDGDEPSED--DEFFDKADAETVD 118
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IK++++ RVRPAVA DGGDI F+G++DGIV+L M+GACSGCPS++ TL++G+ N+L HF
Sbjct: 119 MIKDLIETRVRPAVANDGGDITFRGFKDGIVYLKMQGACSGCPSSTATLQHGIQNLLKHF 178
Query: 180 VPEVKDIRTV 189
VP V ++R +
Sbjct: 179 VPAVVEVRPI 188
>gi|114706882|ref|ZP_01439782.1| nitrogen fixation protein [Fulvimarina pelagi HTCC2506]
gi|114537830|gb|EAU40954.1| nitrogen fixation protein [Fulvimarina pelagi HTCC2506]
Length = 187
Score = 223 bits (568), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 140/188 (74%), Gaps = 4/188 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VVL +G F++ EA + SPLA+R+F + G+ V+FG+D
Sbjct: 1 MFIQTEVTPNPATLKFLPGRVVLEQGTEEFTSIDEAAQRSPLAARLFEVDGVTGVFFGFD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
F+TV KDQ DW HL+P +L +MEHF++ P++ + + G F E D V
Sbjct: 61 FVTVTKDQGDWAHLKPAILAGLMEHFVANRPVMAETSAMN---SEPGEEFFDEGDKETVA 117
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ RVRPAVA+DGGDI F+GYRDGIV+L+MRGACSGCPS++ TLK+G+ N+L HF
Sbjct: 118 TIKELIETRVRPAVAQDGGDITFRGYRDGIVYLNMRGACSGCPSSTATLKHGIQNLLRHF 177
Query: 180 VPEVKDIR 187
VPEV+++
Sbjct: 178 VPEVEEVE 185
>gi|23501052|ref|NP_697179.1| NifU-like protein [Brucella suis 1330]
gi|62289118|ref|YP_220911.1| NifU-like protein [Brucella abortus bv. 1 str. 9-941]
gi|82699057|ref|YP_413631.1| nitrogen-fixing NifU, C-terminal [Brucella melitensis biovar
Abortus 2308]
gi|148560296|ref|YP_001258173.1| NifU-like protein [Brucella ovis ATCC 25840]
gi|161618129|ref|YP_001592016.1| HIRA-interacting protein 5 [Brucella canis ATCC 23365]
gi|189023393|ref|YP_001934161.1| Nitrogen-fixing NifU, C-terminal [Brucella abortus S19]
gi|225851675|ref|YP_002731908.1| NifU-related protein [Brucella melitensis ATCC 23457]
gi|237814609|ref|ZP_04593607.1| NifU-related protein [Brucella abortus str. 2308 A]
gi|254690444|ref|ZP_05153698.1| NifU-related protein [Brucella abortus bv. 6 str. 870]
gi|254694934|ref|ZP_05156762.1| NifU-related protein [Brucella abortus bv. 3 str. Tulya]
gi|254696564|ref|ZP_05158392.1| NifU-related protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254700949|ref|ZP_05162777.1| NifU-related protein [Brucella suis bv. 5 str. 513]
gi|254705318|ref|ZP_05167146.1| NifU-related protein [Brucella suis bv. 3 str. 686]
gi|254718357|ref|ZP_05180168.1| NifU-related protein [Brucella sp. 83/13]
gi|254731477|ref|ZP_05190055.1| NifU-related protein [Brucella abortus bv. 4 str. 292]
gi|256060282|ref|ZP_05450455.1| NifU-related protein [Brucella neotomae 5K33]
gi|256112644|ref|ZP_05453565.1| NifU-related protein [Brucella melitensis bv. 3 str. Ether]
gi|256258700|ref|ZP_05464236.1| NifU-related protein [Brucella abortus bv. 9 str. C68]
gi|256264815|ref|ZP_05467347.1| nitrogen-fixing NifU [Brucella melitensis bv. 2 str. 63/9]
gi|256368604|ref|YP_003106110.1| NifU-related protein [Brucella microti CCM 4915]
gi|260546415|ref|ZP_05822155.1| nitrogen-fixing NifU [Brucella abortus NCTC 8038]
gi|260567221|ref|ZP_05837691.1| nitrogen-fixing NifU [Brucella suis bv. 4 str. 40]
gi|260755996|ref|ZP_05868344.1| scaffold protein Nfu/NifU [Brucella abortus bv. 6 str. 870]
gi|260759220|ref|ZP_05871568.1| scaffold protein Nfu/NifU [Brucella abortus bv. 4 str. 292]
gi|260760942|ref|ZP_05873285.1| scaffold protein Nfu/NifU [Brucella abortus bv. 2 str. 86/8/59]
gi|260885016|ref|ZP_05896630.1| scaffold protein Nfu/NifU [Brucella abortus bv. 9 str. C68]
gi|261215272|ref|ZP_05929553.1| scaffold protein Nfu/NifU [Brucella abortus bv. 3 str. Tulya]
gi|261324254|ref|ZP_05963451.1| scaffold protein Nfu/NifU [Brucella neotomae 5K33]
gi|261751468|ref|ZP_05995177.1| scaffold protein Nfu/NifU [Brucella suis bv. 5 str. 513]
gi|261756030|ref|ZP_05999739.1| scaffold protein Nfu/NifU [Brucella suis bv. 3 str. 686]
gi|265983318|ref|ZP_06096053.1| scaffold protein Nfu/NifU [Brucella sp. 83/13]
gi|265994085|ref|ZP_06106642.1| scaffold protein Nfu/NifU [Brucella melitensis bv. 3 str. Ether]
gi|297247534|ref|ZP_06931252.1| thioredoxin-like protein [Brucella abortus bv. 5 str. B3196]
gi|306839588|ref|ZP_07472392.1| NifU-related protein [Brucella sp. NF 2653]
gi|306842572|ref|ZP_07475223.1| NifU-related protein [Brucella sp. BO2]
gi|306844409|ref|ZP_07476999.1| NifU-related protein [Brucella sp. BO1]
gi|23346918|gb|AAN29094.1| NifU-related protein [Brucella suis 1330]
gi|62195250|gb|AAX73550.1| NifU-related protein [Brucella abortus bv. 1 str. 9-941]
gi|82615158|emb|CAJ10095.1| Nitrogen-fixing NifU, C-terminal [Brucella melitensis biovar
Abortus 2308]
gi|148371553|gb|ABQ61532.1| NifU-related protein [Brucella ovis ATCC 25840]
gi|161334940|gb|ABX61245.1| HIRA-interacting protein 5 [Brucella canis ATCC 23365]
gi|189018965|gb|ACD71687.1| Nitrogen-fixing NifU, C-terminal [Brucella abortus S19]
gi|225640040|gb|ACN99953.1| NifU-related protein [Brucella melitensis ATCC 23457]
gi|237789446|gb|EEP63656.1| NifU-related protein [Brucella abortus str. 2308 A]
gi|255998762|gb|ACU47161.1| NifU-related protein [Brucella microti CCM 4915]
gi|260096522|gb|EEW80398.1| nitrogen-fixing NifU [Brucella abortus NCTC 8038]
gi|260156739|gb|EEW91819.1| nitrogen-fixing NifU [Brucella suis bv. 4 str. 40]
gi|260669538|gb|EEX56478.1| scaffold protein Nfu/NifU [Brucella abortus bv. 4 str. 292]
gi|260671374|gb|EEX58195.1| scaffold protein Nfu/NifU [Brucella abortus bv. 2 str. 86/8/59]
gi|260676104|gb|EEX62925.1| scaffold protein Nfu/NifU [Brucella abortus bv. 6 str. 870]
gi|260874544|gb|EEX81613.1| scaffold protein Nfu/NifU [Brucella abortus bv. 9 str. C68]
gi|260916879|gb|EEX83740.1| scaffold protein Nfu/NifU [Brucella abortus bv. 3 str. Tulya]
gi|261300234|gb|EEY03731.1| scaffold protein Nfu/NifU [Brucella neotomae 5K33]
gi|261741221|gb|EEY29147.1| scaffold protein Nfu/NifU [Brucella suis bv. 5 str. 513]
gi|261745783|gb|EEY33709.1| scaffold protein Nfu/NifU [Brucella suis bv. 3 str. 686]
gi|262765066|gb|EEZ10987.1| scaffold protein Nfu/NifU [Brucella melitensis bv. 3 str. Ether]
gi|263095225|gb|EEZ18894.1| nitrogen-fixing NifU [Brucella melitensis bv. 2 str. 63/9]
gi|264661910|gb|EEZ32171.1| scaffold protein Nfu/NifU [Brucella sp. 83/13]
gi|297174703|gb|EFH34050.1| thioredoxin-like protein [Brucella abortus bv. 5 str. B3196]
gi|306275222|gb|EFM56972.1| NifU-related protein [Brucella sp. BO1]
gi|306287428|gb|EFM58908.1| NifU-related protein [Brucella sp. BO2]
gi|306405286|gb|EFM61561.1| NifU-related protein [Brucella sp. NF 2653]
gi|326408161|gb|ADZ65226.1| Nitrogen-fixing NifU, C-terminal protein [Brucella melitensis M28]
gi|326537871|gb|ADZ86086.1| NifU-related protein [Brucella melitensis M5-90]
Length = 190
Score = 223 bits (568), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 140/190 (73%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ EG F + AE SPLA+++F++PG+ V+FGYD
Sbjct: 1 MFIQTETTPNPATLKFLPGKVVMPEGTADFRDPASAENTSPLAAKLFAVPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K+ +W+HL+P +LG IMEHF+SG P + D F E+D+ +V+
Sbjct: 61 FITVTKEDGEWQHLKPAILGTIMEHFMSGAPAMAGNANADAAAAHGEEEFFDEADTEIVE 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ RVRPAVA+DGGDI F+G+ +G VFL M+GACSGCPS++ TLK+G+ N+L HF
Sbjct: 121 TIKELIETRVRPAVAQDGGDITFRGFENGTVFLHMKGACSGCPSSTATLKHGIQNLLRHF 180
Query: 180 VPEVKDIRTV 189
VPEV+ + +
Sbjct: 181 VPEVQQVEQI 190
>gi|146337209|ref|YP_001202257.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp.
ORS278]
gi|146190015|emb|CAL74007.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp.
ORS278]
Length = 189
Score = 223 bits (567), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 100/187 (53%), Positives = 141/187 (75%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+VVL G + F++ A SPLA R+F++ G+ V++G DF
Sbjct: 1 MFIQTEATPNPATLKFIPGRVVLPAGTMEFASRDAAARSPLAERLFAVDGVTGVFYGADF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
ITV K +W+HL+P +LG IMEH++SG P++ +G + D F E+D+ V
Sbjct: 61 ITVTKSDGEWQHLKPAILGAIMEHYMSGAPLLADGSAANDASADEDDEFFDEADTETVGM 120
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IK+++++RVRPAVA DGGDI F+G++DGIV+L+M+GACSGCPS++ TL++G+ N+L HFV
Sbjct: 121 IKDLIESRVRPAVANDGGDITFRGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKHFV 180
Query: 181 PEVKDIR 187
PEV ++R
Sbjct: 181 PEVVEVR 187
>gi|298293916|ref|YP_003695855.1| Scaffold protein Nfu/NifU [Starkeya novella DSM 506]
gi|296930427|gb|ADH91236.1| Scaffold protein Nfu/NifU [Starkeya novella DSM 506]
Length = 184
Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 138/192 (71%), Gaps = 11/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL G +A EA SPLA+R+F +PG+ V+FG DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRTVLGHGTFEARDADEASRSPLAARLFEVPGVTGVFFGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD---FIESDSAV 117
+TV K++ +W HL+P +LG IMEHF+SG P++ D D F E D+ V
Sbjct: 61 VTVTKEKGEWAHLKPAILGAIMEHFVSGQPVLPE--------DHAHVADDAFFEEKDAGV 112
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V I+E++D RVRPAVA DGGDI F+GY+DG+VFL+M+G+CSGCPS++ TLK G+ N+L
Sbjct: 113 VDTIRELIDTRVRPAVANDGGDITFRGYKDGVVFLAMKGSCSGCPSSTATLKNGIENLLR 172
Query: 178 HFVPEVKDIRTV 189
HFVP+V ++R V
Sbjct: 173 HFVPDVVEVRPV 184
>gi|294851540|ref|ZP_06792213.1| thioredoxin-like protein [Brucella sp. NVSL 07-0026]
gi|294820129|gb|EFG37128.1| thioredoxin-like protein [Brucella sp. NVSL 07-0026]
Length = 190
Score = 221 bits (564), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 139/190 (73%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ EG F + AE SPLA+++F +PG+ V+FGYD
Sbjct: 1 MFIQTETTPNPATLKFLPGKVVMPEGTADFRDPASAENTSPLAAKLFVVPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K+ +W+HL+P +LG IMEHF+SG P + D F E+D+ +V+
Sbjct: 61 FITVTKEDGEWQHLKPAILGTIMEHFMSGAPAMAGNANADAAAAHGEEEFFDEADTEIVE 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ RVRPAVA+DGGDI F+G+ +G VFL M+GACSGCPS++ TLK+G+ N+L HF
Sbjct: 121 TIKELIETRVRPAVAQDGGDITFRGFENGTVFLHMKGACSGCPSSTATLKHGIQNLLRHF 180
Query: 180 VPEVKDIRTV 189
VPEV+ + +
Sbjct: 181 VPEVQQVEQI 190
>gi|319898609|ref|YP_004158702.1| NifU-related protein [Bartonella clarridgeiae 73]
gi|319402573|emb|CBI76118.1| NifU-related protein [Bartonella clarridgeiae 73]
Length = 196
Score = 221 bits (564), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 99/184 (53%), Positives = 138/184 (75%), Gaps = 1/184 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNP TLKF+PG +VL +G + F N +EA + SPLA+++F+IP + SV+ GYD
Sbjct: 1 MFIQTESTPNPTTLKFLPGCIVLPQGVLEFYNREEAAKNSPLAAKLFNIPNVKSVFLGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FIT+ K+ +W+HL+P +LG IMEHF+S DP+I + + + F E D+ +V
Sbjct: 61 FITITKNDGEWQHLKPAILGTIMEHFLSNDPVITTNVITQTEAHMLDKEFFDEKDADIVV 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ R+RPAVA DGGDI F G+ +GIV+L+MRGAC+GCPS++ TLK+G+ N+L HF
Sbjct: 121 VIKELLETRIRPAVANDGGDITFCGFENGIVYLNMRGACAGCPSSTATLKHGIENLLRHF 180
Query: 180 VPEV 183
+PEV
Sbjct: 181 IPEV 184
>gi|154245767|ref|YP_001416725.1| scaffold protein Nfu/NifU [Xanthobacter autotrophicus Py2]
gi|154159852|gb|ABS67068.1| Scaffold protein Nfu/NifU [Xanthobacter autotrophicus Py2]
Length = 186
Score = 221 bits (564), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 144/190 (75%), Gaps = 5/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL EG + + +A++SPLA R+F + G+A+V+ G DF
Sbjct: 1 MFIQTETTPNPATLKFLPGRSVLGEGTLDLRSHDDADLSPLAQRLFDVRGVAAVFLGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES-DSAVVQ 119
+TV K + +W ++P +LG IMEHF+SG P++ +G +K + + +F E+ D+ +V
Sbjct: 61 VTVTKAEAEWPQIKPAILGAIMEHFMSGAPVLSDG----VKPEVADADEFYEAKDAEIVA 116
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+LD RVRPAVA DGGDI F+G++DGIVFL+M+G+CSGCPS++ TLK G+ N+L HF
Sbjct: 117 TIKELLDTRVRPAVANDGGDITFRGFKDGIVFLNMKGSCSGCPSSTATLKNGIENLLKHF 176
Query: 180 VPEVKDIRTV 189
VPEV +++ V
Sbjct: 177 VPEVTEVQAV 186
>gi|220924300|ref|YP_002499602.1| Scaffold protein Nfu/NifU [Methylobacterium nodulans ORS 2060]
gi|219948907|gb|ACL59299.1| Scaffold protein Nfu/NifU [Methylobacterium nodulans ORS 2060]
Length = 187
Score = 221 bits (562), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 101/191 (52%), Positives = 140/191 (73%), Gaps = 6/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP TLKF+PG+VVL EG + +A SPLA +F++PG+A VYFG+DF
Sbjct: 1 MFIQTEATPNPTTLKFLPGRVVLTEGTFEARSPDQAARSPLAQALFAVPGVAGVYFGHDF 60
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
I+V K D +W ++P VLG IMEHF+SG P++ G G+ ++ F E+D+ V
Sbjct: 61 ISVTKAEDGPEWPQVKPAVLGAIMEHFLSGAPVLEAGAAGEGTSEEF----FEEADADTV 116
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IK++L+ RVRPAVA DGGDI F+GYR+G+V+L M+GACSGCPS++ TL+ GV N+ H
Sbjct: 117 ATIKDLLETRVRPAVAGDGGDITFRGYREGVVYLEMKGACSGCPSSTATLRQGVQNLFRH 176
Query: 179 FVPEVKDIRTV 189
F+PEV+++++V
Sbjct: 177 FLPEVREVQSV 187
>gi|163757734|ref|ZP_02164823.1| hypothetical protein HPDFL43_20027 [Hoeflea phototrophica DFL-43]
gi|162285236|gb|EDQ35518.1| hypothetical protein HPDFL43_20027 [Hoeflea phototrophica DFL-43]
Length = 187
Score = 221 bits (562), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 139/190 (73%), Gaps = 4/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ G F +A+EA S LA ++F IPG+ V++GYD
Sbjct: 1 MFIQTESTPNPATLKFLPGKVVMQSGTADFRDAEEAGATSQLAGKLFGIPGVIGVFYGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FIT+ KD DW+HL+P +LG IMEHF+SG P++ + ++ D +V
Sbjct: 61 FITITKDDADWQHLKPAILGTIMEHFMSGAPVMSGPVGEVPEGEEEFF---ESGDETIVA 117
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L++RVRPAVA+DGGDI F+G+RDG VFL M+GAC+GCPS++ TLK+G+ N+L HF
Sbjct: 118 TIKELLESRVRPAVAQDGGDITFRGFRDGKVFLHMKGACAGCPSSTATLKHGIQNLLRHF 177
Query: 180 VPEVKDIRTV 189
VPEV+++ V
Sbjct: 178 VPEVREVEAV 187
>gi|299133388|ref|ZP_07026583.1| Scaffold protein Nfu/NifU [Afipia sp. 1NLS2]
gi|298593525|gb|EFI53725.1| Scaffold protein Nfu/NifU [Afipia sp. 1NLS2]
Length = 187
Score = 220 bits (561), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 101/187 (54%), Positives = 138/187 (73%), Gaps = 2/187 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL G + F++ A SPLA ++F IPG+ V++G DF
Sbjct: 1 MFIQTETTPNPATLKFLPGRTVLDSGTMEFTSRDSAARSPLAVKLFEIPGVTGVFYGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV KD DW+HL+P +LG IMEH++SG PI+ +G D F E+D+ V
Sbjct: 61 VTVTKDDGDWQHLKPAILGTIMEHYMSGGPILADGAQPDAG--PHAEEFFNEADAETVGI 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IK++L+ RVRPAVA DGGDI F+G++DGIVFL M+G+CSGCPS++ TLK+G+ N+L H+V
Sbjct: 119 IKDILETRVRPAVASDGGDITFRGFKDGIVFLDMKGSCSGCPSSTATLKHGIQNLLKHYV 178
Query: 181 PEVKDIR 187
P+V ++R
Sbjct: 179 PDVVEVR 185
>gi|319405374|emb|CBI78993.1| NifU-related protein [Bartonella sp. AR 15-3]
Length = 190
Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 141/184 (76%), Gaps = 7/184 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE+TPNP TLKF+PG++VL +G + F N +EA + SPLA+++F+IP I SV+ GYD
Sbjct: 1 MFIQTENTPNPTTLKFLPGRIVLSQGVLEFHNREEAAKNSPLAAKLFNIPNIKSVFLGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FIT+ K+ +W+HL+P +LG IMEHF+S DP+I ++ + D D E D+ +V
Sbjct: 61 FITITKNDGEWKHLKPAILGTIMEHFLSNDPVITT----EVHISDKEFFD--EKDTDIVV 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA DGGDI F G+ +GIV+L+MRGAC+GCPS++ TLK+G+ N+L HF
Sbjct: 115 VIKELLETRVRPAVANDGGDITFCGFANGIVYLNMRGACAGCPSSTATLKHGIENLLRHF 174
Query: 180 VPEV 183
+PEV
Sbjct: 175 IPEV 178
>gi|49474596|ref|YP_032638.1| hypothetical protein BQ10720 [Bartonella quintana str. Toulouse]
gi|49240100|emb|CAF26539.1| hypothetical protein BQ10720 [Bartonella quintana str. Toulouse]
Length = 192
Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 100/184 (54%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VVL +G + F N++EA + SPLA+++F+IP + V GYD
Sbjct: 1 MFIQTETTPNPATLKFLPGRVVLSKGVLEFRNSEEAAKNSPLAAKLFNIPNVNGVLLGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K +W+HL+P +LG IMEHF+S P+I + + + E D +V
Sbjct: 61 FITVSKKDGEWQHLKPAILGTIMEHFLSDAPVIKTNATIQAQTHALNEEFYDEKDVDIVS 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA DGGDI F G+ +GIV+L+MRGAC+GCPS++ TLK G+ N+L HF
Sbjct: 121 TIKELLETRVRPAVANDGGDITFCGFENGIVYLNMRGACAGCPSSTATLKTGIENLLRHF 180
Query: 180 VPEV 183
+PEV
Sbjct: 181 IPEV 184
>gi|319406947|emb|CBI80584.1| NifU-related protein [Bartonella sp. 1-1C]
Length = 190
Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/184 (54%), Positives = 138/184 (75%), Gaps = 7/184 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNP TLKF+PG++VL +G + F N +EA + SPLA+++F+IP I SV+ GYD
Sbjct: 1 MFIQTESTPNPTTLKFLPGRIVLPQGTLEFHNREEAAKNSPLAAKLFNIPNIKSVFLGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FIT+ K+ +W+HL+P +LG IMEHF+S DP+I + + F E D+ +V
Sbjct: 61 FITITKNDGEWQHLKPAILGTIMEHFLSNDPVI------TTETNIPNKEFFDEKDTDIVI 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA DGGDI F G+ +GIV+L+MRGAC+GCPS++ TLK+G+ N+L HF
Sbjct: 115 VIKELLETRVRPAVANDGGDITFCGFENGIVYLNMRGACAGCPSSTATLKHGIENLLRHF 174
Query: 180 VPEV 183
+PEV
Sbjct: 175 IPEV 178
>gi|304393809|ref|ZP_07375734.1| putative NFU1 iron-sulfur cluster scaffold-like protein [Ahrensia
sp. R2A130]
gi|303294008|gb|EFL88383.1| putative NFU1 iron-sulfur cluster scaffold-like protein [Ahrensia
sp. R2A130]
Length = 190
Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 143/192 (74%), Gaps = 6/192 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PGQ V G FS+A +AE SPLA+ +F+IP ++ V+FGYD
Sbjct: 1 MFIQTEATPNPATLKFLPGQTVAENGPFEFSDAVDAEDRSPLAAGLFAIPSVSGVFFGYD 60
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA-V 117
F+T+ K D DW+H++P VLG+IMEHF+SG P+++ G ++ G F+E S +
Sbjct: 61 FVTITKNDTADWQHVKPAVLGVIMEHFMSGAPVMNADAAGGTEVAPEG---FVEEGSEEI 117
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+L+ RVRPAVA+DGGDI F G++DG V+L MRGAC+GCPS++ TL++G+ N+L
Sbjct: 118 VSTIKELLETRVRPAVAQDGGDITFHGFKDGRVYLKMRGACAGCPSSTATLQHGIQNLLK 177
Query: 178 HFVPEVKDIRTV 189
HF+PEV+ + V
Sbjct: 178 HFIPEVEAVEAV 189
>gi|312113945|ref|YP_004011541.1| Scaffold protein Nfu/NifU [Rhodomicrobium vannielii ATCC 17100]
gi|311219074|gb|ADP70442.1| Scaffold protein Nfu/NifU [Rhodomicrobium vannielii ATCC 17100]
Length = 184
Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 105/190 (55%), Positives = 144/190 (75%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+ VL EG F + +AE +SPLA+R+F + G+ +V+ G D
Sbjct: 1 MFIQTEMTPNPATLKFLPGRTVLEEGTREFLTSDDAEGVSPLAARLFEVEGVTAVFLGSD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
F++V KD+ DWE L+PPVLG+IMEHF+SG P++ + + DF ++D VV
Sbjct: 61 FVSVTKDRGDWESLKPPVLGVIMEHFMSGQPVLSD------ERHVAEDEDFDDADKEVVT 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ RVRPAVA DGGDI FKG+RDG+V+L M+GACSGCPSA+ TL++G+ N+L HF
Sbjct: 115 TIKELIETRVRPAVANDGGDITFKGFRDGVVYLKMQGACSGCPSATATLRHGIENLLKHF 174
Query: 180 VPEVKDIRTV 189
VPEV++++ V
Sbjct: 175 VPEVQEVQPV 184
>gi|126740480|ref|ZP_01756167.1| nifU domain protein [Roseobacter sp. SK209-2-6]
gi|126718281|gb|EBA14996.1| nifU domain protein [Roseobacter sp. SK209-2-6]
Length = 187
Score = 218 bits (556), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 137/190 (72%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F NA+ AE SPLA R+F+ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLETGTADFPNAEAAENSPLAQRVFAAAGVTGVFFGNDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + +W+H++P +LG IMEHF SG P+++ GG G + D+ VV
Sbjct: 61 VTVTKSEDVEWDHIKPAILGAIMEHFQSGQPVLNAGGA-----QSSGHAEHSGEDAEVVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK++LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKDLLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|316931562|ref|YP_004106544.1| Scaffold protein Nfu/NifU [Rhodopseudomonas palustris DX-1]
gi|315599276|gb|ADU41811.1| Scaffold protein Nfu/NifU [Rhodopseudomonas palustris DX-1]
Length = 188
Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 100/187 (53%), Positives = 141/187 (75%), Gaps = 2/187 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+ VL G + F++A +A SPLA+R+F I G++ V++G DF
Sbjct: 1 MFIQTEPTPNPATLKFIPGRSVLDSGTLEFTDAAQAARSPLAARLFDIDGVSGVFYGADF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV KD+ +W+HL+P +LG IMEH++SG PI+ D + E D+ V+
Sbjct: 61 VTVTKDRGEWQHLKPAILGAIMEHYMSGAPIL--ADGKSDGDDGDDDEFYAEGDAETVEI 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IK++++ RVRPAVA DGGDI F+G++DGIV+L+MRGAC+GCPS++ TL++G+ N+L HFV
Sbjct: 119 IKDLIETRVRPAVANDGGDITFRGFKDGIVYLNMRGACAGCPSSTATLQHGIQNLLKHFV 178
Query: 181 PEVKDIR 187
PEV ++R
Sbjct: 179 PEVVEVR 185
>gi|319403933|emb|CBI77521.1| NifU-related protein [Bartonella rochalimae ATCC BAA-1498]
Length = 190
Score = 217 bits (553), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 140/185 (75%), Gaps = 9/185 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNP TLKF+PG++VL +G + F N +EA + SPLA+++F+IP I SV+ GYD
Sbjct: 1 MFIQTESTPNPTTLKFLPGRIVLPQGTLEFHNREEAAKNSPLAAKLFNIPNIKSVFLGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI-ESDSAVV 118
FIT+ K+ +W+HL+P +LG IME+F+S DP+I ++ + +F E D+ +V
Sbjct: 61 FITITKNDGEWQHLKPAILGTIMEYFLSNDPVITTEA-------NLPNKEFFDEKDTDIV 113
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+L+ RVRPAVA DGGDI F G+ +GIV+L+MRGAC+GCPS++ TLK+G+ N+L H
Sbjct: 114 VVIKELLETRVRPAVANDGGDITFCGFENGIVYLNMRGACAGCPSSTATLKHGIENLLRH 173
Query: 179 FVPEV 183
F+PEV
Sbjct: 174 FIPEV 178
>gi|209883678|ref|YP_002287535.1| nitrogen-fixing NifU domain protein [Oligotropha carboxidovorans
OM5]
gi|209871874|gb|ACI91670.1| nitrogen-fixing NifU domain protein [Oligotropha carboxidovorans
OM5]
Length = 187
Score = 217 bits (552), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 138/187 (73%), Gaps = 2/187 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG++V+ G + F++ SPLA+++F IPG+ V++ DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRLVIESGTMEFTDRDSTARSPLAAKLFDIPGVTGVFYSSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
ITV K + DW+HL+P +LG IMEH++SG PI+ +G D F E+D+ V
Sbjct: 61 ITVTKGEGDWQHLKPAILGTIMEHYMSGAPILADGAKPDAG--PHAEEFFNEADAETVTI 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IK++++ RVRPAVA DGGDI F+G++DGIVFL M+G+CSGCPS++ TLK+G+ N+L HFV
Sbjct: 119 IKDIIETRVRPAVASDGGDITFRGFKDGIVFLDMKGSCSGCPSSTATLKHGIQNLLKHFV 178
Query: 181 PEVKDIR 187
P+V ++R
Sbjct: 179 PDVVEVR 185
>gi|260426420|ref|ZP_05780399.1| scaffold protein Nfu/NifU [Citreicella sp. SE45]
gi|260420912|gb|EEX14163.1| scaffold protein Nfu/NifU [Citreicella sp. SE45]
Length = 185
Score = 216 bits (551), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 134/190 (70%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F NA A+ SPLA R+FS+ G+ V+ G DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQAVLGAGTADFPNADGADASPLARRLFSVTGVTGVFLGSDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD DW+H++P VLG IMEHF SGDP++ G G F D +V
Sbjct: 61 VTVTKDDGADWDHVKPAVLGAIMEHFQSGDPVMAGEG------GSSGHAAFDGEDKEIVG 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDSRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVTEVRPV 184
>gi|260431494|ref|ZP_05785465.1| NifU domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260415322|gb|EEX08581.1| NifU domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 187
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 135/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F A+ AE SPLA RIF++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEAGTADFPTAEAAENSPLAKRIFAVKGVTGVFFGNDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD W+H++P +LG +MEH+ SG PI +GD G + DS +V
Sbjct: 61 VTVTKDDDVQWDHIKPAILGAVMEHYQSGQPI-----MGDGADAASGHAEHTGEDSEIVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|158426327|ref|YP_001527619.1| nitrogen-fixing protein [Azorhizobium caulinodans ORS 571]
gi|158333216|dbj|BAF90701.1| nitrogen-fixing protein [Azorhizobium caulinodans ORS 571]
Length = 186
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/189 (52%), Positives = 136/189 (71%), Gaps = 3/189 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL +G + + EA SPL R+F + G+ V+ G DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRTVLGDGTLEARSPAEAGRSPLVQRLFEVKGVGGVFLGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV K DW H++P +LG IMEHF+SG P++ +G D + G F E+D +V
Sbjct: 61 VTVTKTDGDWAHMKPAILGAIMEHFMSGAPVLADGVAAD---QEDGEEFFNEADEEIVGT 117
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+++ RVRPAVA DGGDI F+G+R+G+V+L+M+G+CSGCPS++ TLK G+ N+L HFV
Sbjct: 118 IKELIETRVRPAVAADGGDITFRGFREGVVYLNMKGSCSGCPSSTATLKNGIENLLRHFV 177
Query: 181 PEVKDIRTV 189
PEV ++R V
Sbjct: 178 PEVNEVRPV 186
>gi|121601928|ref|YP_989428.1| NifU family protein [Bartonella bacilliformis KC583]
gi|120614105|gb|ABM44706.1| NifU family protein [Bartonella bacilliformis KC583]
Length = 192
Score = 216 bits (551), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 133/184 (72%), Gaps = 1/184 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+V+L EG + F +++ A + SPLA+++F I ++ V GYD
Sbjct: 1 MFIQTETTPNPATLKFLPGRVILSEGVLEFRDSEAAALGSPLAAKLFQISNVSGVLLGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K +W+HL+P +LG IMEH +S PI+ G + + E D+ +V
Sbjct: 61 FITVTKSDGEWQHLKPVILGTIMEHLLSNAPIVSTGAAAHAQSHTHNEEFYDEKDADIVS 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA DGGDI F+G+ GIV+L+MRGAC+GCPS++ TLK+G+ N+L HF
Sbjct: 121 TIKELLETRVRPAVANDGGDITFRGFEHGIVYLNMRGACAGCPSSTATLKHGIENLLRHF 180
Query: 180 VPEV 183
+PEV
Sbjct: 181 IPEV 184
>gi|254461257|ref|ZP_05074673.1| NifU domain protein [Rhodobacterales bacterium HTCC2083]
gi|206677846|gb|EDZ42333.1| NifU domain protein [Rhodobacteraceae bacterium HTCC2083]
Length = 188
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 138/190 (72%), Gaps = 5/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A A++SPLA+RIF++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEMGTADFPSAVGADVSPLAARIFAVEGVTGVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+H++P +LG IMEHF SG ++ GDM + G + D +V
Sbjct: 61 VTVTKADAVEWDHIKPALLGAIMEHFQSGAAVM----AGDMAPPNSGHAEHTGEDGEIVV 116
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 117 QIKELLDSRVRPAVAQDGGDITFHGFERGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 176
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 177 IPEVTEVRPV 186
>gi|99078069|ref|YP_611327.1| nitrogen-fixing NifU-like [Ruegeria sp. TM1040]
gi|99035207|gb|ABF62065.1| nitrogen-fixing NifU-like protein [Ruegeria sp. TM1040]
Length = 187
Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 136/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA RIF++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLDAGTADFPSAEAASKSPLAQRIFAVSGVTGVFFGNDF 60
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD +W+H++P VLG +MEH+ SG P+I+ G + G + D +V
Sbjct: 61 VTVTKDDSVEWDHIKPAVLGAVMEHYQSGQPVINEG-----QQQASGHAEHTGEDGEIVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|149202972|ref|ZP_01879943.1| nitrogen-fixing NifU-like protein [Roseovarius sp. TM1035]
gi|149143518|gb|EDM31554.1| nitrogen-fixing NifU-like protein [Roseovarius sp. TM1035]
Length = 187
Score = 216 bits (549), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 140/190 (73%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+++ SPLA RIF +PG++ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEAGTADFPSAEKSGSSPLAERIFRVPGVSGVFFGNDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + +W+H++P +LG IMEH+ SG P++ LG+ + G + DSA+V
Sbjct: 61 VTVTKGEAIEWDHIKPAILGAIMEHYQSGQPVM----LGESAVAS-GHAEHTGEDSAIVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTITLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|294678745|ref|YP_003579360.1| NifU domain-containing protein [Rhodobacter capsulatus SB 1003]
gi|294477565|gb|ADE86953.1| NifU domain protein [Rhodobacter capsulatus SB 1003]
Length = 188
Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 135/190 (71%), Gaps = 5/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG V+ EG F++ + A++SPLA RIF + G+ +V+ G DF
Sbjct: 1 MFIQTETTPNPATLKFLPGLDVMPEGVADFTSVEAAQVSPLAGRIFRVAGVKAVFLGADF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD+ +W H RP ++G IMEH+ SG P++ G +G+ D A++
Sbjct: 61 VTVTKDEATEWAHARPAIMGAIMEHYQSGQPVLMGAAAGGHTTGGADTGE----DGAIIS 116
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVARDGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 117 QIKELLDTRVRPAVARDGGDITFHGFEKGVVYLHMQGACAGCPSSTYTLKMGIENLLRHY 176
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 177 IPEVSEVRAV 186
>gi|86138949|ref|ZP_01057520.1| nifU domain protein [Roseobacter sp. MED193]
gi|85824180|gb|EAQ44384.1| nifU domain protein [Roseobacter sp. MED193]
Length = 187
Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 139/190 (73%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA+RIF++ G+A V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLDAGTADFPSAETAGSSPLATRIFAVSGVAGVFFGNDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+H++P +LG IMEH+ SG PI++ GG G + +S +V
Sbjct: 61 VTVTKSDSVEWDHIKPAILGAIMEHYQSGQPIVNAGGE-----QSSGHAEHSGENSEIVD 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK++LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKDLLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|254474955|ref|ZP_05088341.1| NifU domain protein [Ruegeria sp. R11]
gi|214029198|gb|EEB70033.1| NifU domain protein [Ruegeria sp. R11]
Length = 187
Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 135/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA RIF++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEMGTADFPSAEAAGSSPLAQRIFAVSGVTGVFFGNDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+H++P +LG +MEHF SG P+I GG G + D +V
Sbjct: 61 VTVTKADGVEWDHIKPAILGAVMEHFQSGQPVISEGGE-----QTSGHAEHTGEDGEIVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|83949998|ref|ZP_00958731.1| nifU domain protein [Roseovarius nubinhibens ISM]
gi|83837897|gb|EAP77193.1| nifU domain protein [Roseovarius nubinhibens ISM]
Length = 188
Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 138/190 (72%), Gaps = 5/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA RIF I G+ V+FG+DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLDAGTADFPSAEAAGKSPLAERIFKIAGVTGVFFGHDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD+ +W+H++P +LG IMEHF SG P++ + G GD + G + D +V
Sbjct: 61 VTVTKDEGTEWDHVKPAILGAIMEHFQSGKPVMLDAG-GDPQ---SGHAEHTGEDGEIVN 116
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 117 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTITLKMGIENLLRHY 176
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 177 IPEVTEVRPV 186
>gi|163738966|ref|ZP_02146379.1| nitrogen-fixing NifU-like protein [Phaeobacter gallaeciensis BS107]
gi|163741789|ref|ZP_02149179.1| nifU domain protein [Phaeobacter gallaeciensis 2.10]
gi|161384962|gb|EDQ09341.1| nifU domain protein [Phaeobacter gallaeciensis 2.10]
gi|161387771|gb|EDQ12127.1| nitrogen-fixing NifU-like protein [Phaeobacter gallaeciensis BS107]
Length = 187
Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 133/190 (70%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F A A SPLA RIF++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEMGTADFPTADAAGSSPLAQRIFAVSGVTGVFFGNDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+H++P +LG +MEHF SG P+I GG G + D +V
Sbjct: 61 VTVTKADTVEWDHIKPAILGAVMEHFQSGQPVISEGGE-----QTSGHAEHTGEDGEIVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|259415063|ref|ZP_05738985.1| NifU domain protein [Silicibacter sp. TrichCH4B]
gi|259348973|gb|EEW60727.1| NifU domain protein [Silicibacter sp. TrichCH4B]
Length = 187
Score = 215 bits (547), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 135/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA RIF++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLDAGTADFPSAEAASKSPLAQRIFAVSGVTGVFFGNDF 60
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD +W+H++P VLG +MEH+ SG P+I G + G + D +V
Sbjct: 61 VTVTKDDSVEWDHIKPAVLGAVMEHYQSGQPVIDEG-----QQQASGHAEHTGEDGEIVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|85705721|ref|ZP_01036818.1| nifU domain protein [Roseovarius sp. 217]
gi|85669711|gb|EAQ24575.1| nifU domain protein [Roseovarius sp. 217]
Length = 187
Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 136/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F A+ AE SPLA RIF +PG++ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLDAGTADFPTAEGAEKSPLAERIFRVPGVSGVFFGNDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + +W+H++P +LG IMEH+ SG P++ G G G + DS +V
Sbjct: 61 VTVTKGEATEWDHIKPAILGAIMEHYQSGQPVMLGEGGGAS-----GHAEHSGEDSEIVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTITLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|300024980|ref|YP_003757591.1| Scaffold protein Nfu/NifU [Hyphomicrobium denitrificans ATCC 51888]
gi|299526801|gb|ADJ25270.1| Scaffold protein Nfu/NifU [Hyphomicrobium denitrificans ATCC 51888]
Length = 184
Score = 214 bits (546), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 131/189 (69%), Gaps = 5/189 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+ VL G F EA SPLA+R+F+I G+ V+ G DF
Sbjct: 1 MFIQTEATPNPATLKFIPGRDVLAGGTADFRTRNEAVASPLATRLFAIDGVDGVFLGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
I+V K +W+HL+P VLG IMEH++SG P+ + +D G+ + D A V
Sbjct: 61 ISVTKGNVEWQHLKPMVLGAIMEHYMSGAPVSD-----EEDSNDEGAESYDPEDEATVTT 115
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+L+ RVRPAVA+DGGDI F G+RDG+V+L MRGACSGCPS++ TL+ G+ N+L HF
Sbjct: 116 IKELLETRVRPAVAQDGGDITFSGFRDGVVYLHMRGACSGCPSSTATLRNGIENLLKHFC 175
Query: 181 PEVKDIRTV 189
PEV + V
Sbjct: 176 PEVTSVEAV 184
>gi|163734126|ref|ZP_02141567.1| NifU-like domain protein [Roseobacter litoralis Och 149]
gi|161392662|gb|EDQ16990.1| NifU-like domain protein [Roseobacter litoralis Och 149]
Length = 187
Score = 214 bits (546), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 135/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A+ SPLA RIF+I G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEMGTADFPSAETADKSPLAERIFAIEGVTGVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D DW+H++P +LG IMEHF SG P++ GD G + D +V
Sbjct: 61 VTVTKADSVDWDHIKPGLLGAIMEHFQSGQPVM----AGD-HTPTSGHAEHTGEDGVIVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|110678955|ref|YP_681962.1| NifU-like domain-containing protein [Roseobacter denitrificans OCh
114]
gi|109455071|gb|ABG31276.1| NifU-like domain protein [Roseobacter denitrificans OCh 114]
Length = 187
Score = 214 bits (545), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 135/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A+ SPLA R+F++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEMGTADFPSAETADKSPLAERVFAVEGVTGVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D DW+H++P +LG IMEHF SG P++ GD G + D +V
Sbjct: 61 VTVTKADNVDWDHIKPALLGAIMEHFQSGQPVM----AGD-HTPTSGHAEHTGDDGVIVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|310815348|ref|YP_003963312.1| NifU domain protein [Ketogulonicigenium vulgare Y25]
gi|308754083|gb|ADO42012.1| NifU domain protein [Ketogulonicigenium vulgare Y25]
Length = 185
Score = 214 bits (544), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 134/190 (70%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA R+F++ G+ V+ GYDF
Sbjct: 1 MFIQTESTPNPATLKFLPGQQVLELGTADFPSAEAATTSPLAKRLFAVDGVTGVFLGYDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K D +W HL+P VLG IMEHF SG P++ + + D D A+V+
Sbjct: 61 ITVTKTDNLEWPHLKPAVLGAIMEHFQSGQPVMEGEAVSAHRAHD-------GEDGAIVE 113
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+G+C+GCPS++ TLK G+ N+L H+
Sbjct: 114 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGSCAGCPSSTLTLKMGIENLLRHY 173
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 174 IPEVLEVRPV 183
>gi|126725029|ref|ZP_01740872.1| nifU domain protein [Rhodobacterales bacterium HTCC2150]
gi|126706193|gb|EBA05283.1| nifU domain protein [Rhodobacterales bacterium HTCC2150]
Length = 187
Score = 213 bits (543), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 134/190 (70%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A+ SPLA+RIF I GIA V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLETGTADFPSAETADQSPLATRIFGIQGIAGVFFGNDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + +W+H++P +LG IMEHF SG P++ + E D +V
Sbjct: 61 VTVTKAENSEWDHIKPAILGAIMEHFQSGQPVLSGENTAPAHAEAAN-----EEDKEIVG 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVVEVRPV 185
>gi|89053356|ref|YP_508807.1| nitrogen-fixing NifU-like [Jannaschia sp. CCS1]
gi|88862905|gb|ABD53782.1| nitrogen-fixing NifU-like protein [Jannaschia sp. CCS1]
Length = 187
Score = 213 bits (543), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 135/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F A+ +E SPLASRIF++ G+ V+FG DF
Sbjct: 1 MFIQTEATPNPATLKFLPGQSVLEVGTADFPTAETSEKSPLASRIFAVEGVTGVFFGIDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D DW+H++P +LG IMEH+ SGDP+ +GD G + D +V
Sbjct: 61 VTVTKADAVDWDHVKPAILGAIMEHYQSGDPV-----MGDGHEVSSGHAEHTGEDGEIVG 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK +LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKSLLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVVEVRPV 185
>gi|83943871|ref|ZP_00956328.1| nifU domain protein [Sulfitobacter sp. EE-36]
gi|83953512|ref|ZP_00962234.1| nifU domain protein [Sulfitobacter sp. NAS-14.1]
gi|83842480|gb|EAP81648.1| nifU domain protein [Sulfitobacter sp. NAS-14.1]
gi|83845118|gb|EAP82998.1| nifU domain protein [Sulfitobacter sp. EE-36]
Length = 186
Score = 213 bits (542), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 136/192 (70%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F + A SPLA+R+F++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEMGTADFPAPEAASASPLATRLFAVEGVTGVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG--DFIESDSAV 117
+T+ K D +W+HL+P +LG IMEHF SG P++ G D SG + D A+
Sbjct: 61 VTITKADGIEWDHLKPALLGAIMEHFQSGQPVMETG-------HDHASGHAEHTGEDGAI 113
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L
Sbjct: 114 VGQIKELLDSRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLR 173
Query: 178 HFVPEVKDIRTV 189
H++PEV ++R V
Sbjct: 174 HYIPEVTEVRPV 185
>gi|260574570|ref|ZP_05842574.1| Scaffold protein Nfu/NifU [Rhodobacter sp. SW2]
gi|259023466|gb|EEW26758.1| Scaffold protein Nfu/NifU [Rhodobacter sp. SW2]
Length = 186
Score = 213 bits (541), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/190 (54%), Positives = 137/190 (72%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA RIF+ G+ASV+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLELGTADFPSAEAAGKSPLAQRIFAAGGVASVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D W+H++P +LG IMEHF SG P+I + G D DS +V+
Sbjct: 61 VTVTKTDTAAWDHIKPGILGAIMEHFQSGAPVIEG------EQAASGHADHDGPDSDIVR 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R+V
Sbjct: 175 IPEVLEVRSV 184
>gi|91974729|ref|YP_567388.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris BisB5]
gi|91681185|gb|ABE37487.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris BisB5]
Length = 188
Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 139/181 (76%), Gaps = 5/181 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+VVL G + F++ K+A SPLA R+F + G++ V++G DF
Sbjct: 1 MFIQTEPTPNPATLKFIPGRVVLDSGTMEFTDRKQAARSPLAERLFEVEGVSGVFYGSDF 60
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGL-GDMKLDDMGSGDFIESDSAVV 118
+TV KD DW+HL+P +LG IMEH++SG PI+ +G + GD +D F E D+ V
Sbjct: 61 VTVTKDGAGDWQHLKPAILGAIMEHYMSGAPIMADGRVDGDETDEDEF---FAERDAETV 117
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ IK++++ RVRPAVA DGGDI F+G++DG+V+L+M+GACSGCPS++ TL++G+ N+L H
Sbjct: 118 EIIKDLIETRVRPAVANDGGDITFRGFKDGVVYLAMKGACSGCPSSTATLQHGIQNLLKH 177
Query: 179 F 179
F
Sbjct: 178 F 178
>gi|254465238|ref|ZP_05078649.1| NifU domain protein [Rhodobacterales bacterium Y4I]
gi|206686146|gb|EDZ46628.1| NifU domain protein [Rhodobacterales bacterium Y4I]
Length = 188
Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 136/190 (71%), Gaps = 5/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A A SPLASRIF++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEAGTADFPSADAAGKSPLASRIFAVDGVTGVFFGNDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + DW+H++P +LG +MEH+ SG P++ +G G + D+ +V
Sbjct: 61 VTVTKAEGIDWDHIKPAILGAVMEHYQSGQPVMADGSADPAS----GHAEHSGEDAEIVN 116
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 117 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 176
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 177 IPEVTEVRPV 186
>gi|46201919|ref|ZP_00054106.2| COG0694: Thioredoxin-like proteins and domains [Magnetospirillum
magnetotacticum MS-1]
Length = 182
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 137/190 (72%), Gaps = 10/190 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG VV+ +G F+ A A SPLA+R+F+I G+ SV+ G DF
Sbjct: 1 MFIQTEPTPNPATLKFLPGTVVMGQGTADFAEASRASGSPLATRLFAIEGVGSVFLGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K D DW+ ++P VL IM+H+ SGDP+I+ G SGD D +V
Sbjct: 61 ITVAKADSADWQVVKPQVLAAIMDHYNSGDPVINPGSEAAS-----ASGD----DDGIVM 111
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI+F+ + DGIV+L ++GACSGCPS+S TLK+G+ N+L ++
Sbjct: 112 QIKELLDTRVRPAVAQDGGDIIFRAFEDGIVYLHLQGACSGCPSSSATLKHGIENMLKYY 171
Query: 180 VPEVKDIRTV 189
VPEV ++ V
Sbjct: 172 VPEVMAVQAV 181
>gi|39933530|ref|NP_945806.1| NifU-like domain-containing protein [Rhodopseudomonas palustris
CGA009]
gi|39647376|emb|CAE25897.1| possible NifU-like domain (residues 119-187) [Rhodopseudomonas
palustris CGA009]
Length = 188
Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 137/179 (76%), Gaps = 2/179 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+ VL G + F++A +A SPLA+R+F I G++ V++G DF
Sbjct: 1 MFIQTEPTPNPATLKFIPGRSVLDSGTLEFTDASQAARSPLAARLFDIDGVSGVFYGTDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV KD+ +W+HL+P +LG IMEH++SG PI+ +G D + ++D+ V+
Sbjct: 61 VTVTKDKGEWQHLKPAILGAIMEHYMSGTPILADG--KSDGEDGDDDEFYADADAETVEI 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IK++++ RVRPAVA DGGDI F+G++DGIV+L+MRGAC+GCPS++ TL++G+ N+L HF
Sbjct: 119 IKDLIETRVRPAVANDGGDITFRGFKDGIVYLNMRGACAGCPSSTATLQHGIQNLLKHF 177
>gi|188582635|ref|YP_001926080.1| Scaffold protein Nfu/NifU [Methylobacterium populi BJ001]
gi|179346133|gb|ACB81545.1| Scaffold protein Nfu/NifU [Methylobacterium populi BJ001]
Length = 188
Score = 211 bits (537), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 139/192 (72%), Gaps = 7/192 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL EG +A AE SPLA+ +FS+PG++ VYFG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRVVLPEGTFEARDAAGAERSPLATALFSVPGVSGVYFGHDF 60
Query: 61 ITVGKDQ--YDWEHLRPPVLGMIMEHFISGDPIIHNG-GLGDMKLDDMGSGDFIESDSAV 117
I+V K +W ++P VLG IM+HF SG P++ G L + + ++ + E+D
Sbjct: 61 ISVTKADGVNEWPQVKPAVLGAIMDHFQSGRPVLAEGTALAEDETEEF----YDEADHDT 116
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IK++L+ RVRPAVA DGGDI F+GYRDGIV+L M+GACSGCPS++ TL+ GV N+
Sbjct: 117 VATIKDLLETRVRPAVAGDGGDITFRGYRDGIVYLEMKGACSGCPSSTATLRQGVQNLFR 176
Query: 178 HFVPEVKDIRTV 189
HF+P V++++ +
Sbjct: 177 HFLPSVREVQAI 188
>gi|192288888|ref|YP_001989493.1| Scaffold protein Nfu/NifU [Rhodopseudomonas palustris TIE-1]
gi|192282637|gb|ACE99017.1| Scaffold protein Nfu/NifU [Rhodopseudomonas palustris TIE-1]
Length = 188
Score = 211 bits (537), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 137/179 (76%), Gaps = 2/179 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+ VL G + F++A +A SPLA+R+F I G++ V++G DF
Sbjct: 1 MFIQTEPTPNPATLKFIPGRRVLDSGTLEFTDASQAARSPLAARLFDIDGVSGVFYGTDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV KD+ +W+HL+P +LG IMEH++SG PI+ +G D + ++D+ V+
Sbjct: 61 VTVTKDKGEWQHLKPAILGAIMEHYMSGTPILADG--KSDGEDGDDDEFYADADAETVEI 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IK++++ RVRPAVA DGGDI F+G++DGIV+L+MRGAC+GCPS++ TL++G+ N+L HF
Sbjct: 119 IKDLIETRVRPAVANDGGDITFRGFKDGIVYLNMRGACAGCPSSTATLQHGIQNLLKHF 177
>gi|83313502|ref|YP_423766.1| HIRA-interacting protein 5 [Magnetospirillum magneticum AMB-1]
gi|82948343|dbj|BAE53207.1| HIRA-interacting protein 5 [Magnetospirillum magneticum AMB-1]
Length = 190
Score = 211 bits (536), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/190 (54%), Positives = 137/190 (72%), Gaps = 10/190 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG VV+ +G F+ A A SPLA+R+F+I G+ SV+ G DF
Sbjct: 9 MFIQTEPTPNPATLKFLPGTVVMGQGTADFAEASRASGSPLATRLFAIDGVGSVFLGTDF 68
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K D DW+ ++P VL IM+H+ SGDP+I+ G SGD D +V
Sbjct: 69 ITVAKLDAADWQVVKPQVLAAIMDHYNSGDPVINPGSEAAA-----ASGD----DDGIVM 119
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI+F+ + DGIV+L ++GACSGCPS+S TLK+G+ N+L ++
Sbjct: 120 QIKELLDTRVRPAVAQDGGDIIFRAFEDGIVYLHLQGACSGCPSSSATLKHGIENMLKYY 179
Query: 180 VPEVKDIRTV 189
VPEV ++ V
Sbjct: 180 VPEVMAVQAV 189
>gi|86747711|ref|YP_484207.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris HaA2]
gi|86570739|gb|ABD05296.1| Nitrogen-fixing NifU-like [Rhodopseudomonas palustris HaA2]
Length = 188
Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 135/179 (75%), Gaps = 1/179 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+VVL G + F++ +A SPLA R+F + G++ V++G DF
Sbjct: 1 MFIQTEPTPNPATLKFIPGRVVLDSGTMEFTDRSQAARSPLAERLFDVDGVSGVFYGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV KD DW+HL+P +LG IMEH++SG PI+ +G D+ F E D+ V+
Sbjct: 61 VTVTKDGGDWQHLKPAILGAIMEHYMSGAPILADGKTDGDAGDEDDEF-FAERDAETVEI 119
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IK++++ RVRPAVA DGGDI F+G++DGIV+L+M+GACSGCPS++ TL++G+ N+L HF
Sbjct: 120 IKDLIETRVRPAVANDGGDITFRGFKDGIVYLAMKGACSGCPSSTATLQHGIQNLLKHF 178
>gi|114764450|ref|ZP_01443675.1| nifU domain protein [Pelagibaca bermudensis HTCC2601]
gi|114543017|gb|EAU46036.1| nifU domain protein [Roseovarius sp. HTCC2601]
Length = 186
Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 133/190 (70%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ + SPLA R+F + G+ V+ G DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLGAGTADFPSAEGTDASPLAKRLFGVTGVTGVFLGSDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D DW+H++P VLG IMEHF SG+P++ G G F D +V
Sbjct: 61 VTVTKADGADWDHVKPAVLGAIMEHFQSGEPVMAGEGGAS------GHAAFEGEDEEIVG 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDSRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVTEVRPV 184
>gi|126730479|ref|ZP_01746290.1| nifU domain protein [Sagittula stellata E-37]
gi|126709212|gb|EBA08267.1| nifU domain protein [Sagittula stellata E-37]
Length = 187
Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 134/190 (70%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A A SPLA R+F++ G+ ++FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLDMGTADFPSADAAGASPLAQRLFAVDGVTGIFFGNDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D DW+H++P +LG IMEHF SG P++ +G G + D +V
Sbjct: 61 VTVTKADTVDWDHMKPAILGAIMEHFQSGQPVMSDGAA-----QAGGHAEHEGEDGEIVG 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|84500284|ref|ZP_00998550.1| nifU domain protein [Oceanicola batsensis HTCC2597]
gi|84392218|gb|EAQ04486.1| nifU domain protein [Oceanicola batsensis HTCC2597]
Length = 187
Score = 210 bits (535), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 134/190 (70%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ + SPLA+R+F++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEAGTADFPSAETSGKSPLAARLFAVEGVTGVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D+ W+H++P +LG IMEH+ SG P++ G G D D +V
Sbjct: 61 VTVTKADETQWDHIKPALLGAIMEHYQSGQPVMATG-----DQPTSGHADHEGEDQEIVV 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLYMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|254510570|ref|ZP_05122637.1| NifU domain protein [Rhodobacteraceae bacterium KLH11]
gi|221534281|gb|EEE37269.1| NifU domain protein [Rhodobacteraceae bacterium KLH11]
Length = 187
Score = 210 bits (535), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 137/192 (71%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ AE SPLA+RIF + G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEAGTADFPSAEAAEKSPLATRIFGVAGVTGVFFGNDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES--DSAV 117
+TV K D W+H++P +LG +MEH+ SG P++ D G+G S D+ +
Sbjct: 61 VTVTKSDDMQWDHIKPAILGAVMEHYQSGQPVMGTDA-------DTGAGHAEHSGEDAEI 113
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +IK++LD+RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L
Sbjct: 114 VDQIKDLLDSRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTITLKMGIENLLR 173
Query: 178 HFVPEVKDIRTV 189
H++PEV ++R V
Sbjct: 174 HYIPEVVEVRPV 185
>gi|56695297|ref|YP_165645.1| NifU domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56677034|gb|AAV93700.1| nifU domain protein [Ruegeria pomeroyi DSS-3]
Length = 187
Score = 210 bits (535), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 136/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ AE SPLA+RIF++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEVGTADFPSAEAAEKSPLAARIFAVSGVTGVFFGNDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + +W+H++P +LG +MEH+ SG P+ +G G + D+ VV
Sbjct: 61 VTVTKAEGVEWDHIKPAILGAVMEHYQSGQPV-----MGADAQTGSGHAEHSGEDAEVVT 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK +LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKALLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|154254042|ref|YP_001414866.1| scaffold protein Nfu/NifU [Parvibaculum lavamentivorans DS-1]
gi|154157992|gb|ABS65209.1| Scaffold protein Nfu/NifU [Parvibaculum lavamentivorans DS-1]
Length = 201
Score = 210 bits (534), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 135/190 (71%), Gaps = 5/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+ VL EG A F A+ A SPLA R+F++ + V+FG D
Sbjct: 16 MFIQTEATPNPATLKFLPGREVLGEGRAADFPTAEAAARSPLAMRLFAVENVTGVFFGSD 75
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K +W+HL+P +LG IMEHF G PI+ + D G+ D +V
Sbjct: 76 FITVTKSGGEWQHLKPALLGAIMEHFTGGAPILFSAAPDDDDAHAAHEGE----DGEIVT 131
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F+GY +G+VFL+M+GAC+GCPS++ TLK GV N+L H+
Sbjct: 132 QIKEILDTRVRPAVAQDGGDITFQGYEEGVVFLNMQGACAGCPSSTVTLKRGVENMLKHY 191
Query: 180 VPEVKDIRTV 189
+PE+ ++R V
Sbjct: 192 IPEIVEVRQV 201
>gi|254487441|ref|ZP_05100646.1| NifU domain protein [Roseobacter sp. GAI101]
gi|214044310|gb|EEB84948.1| NifU domain protein [Roseobacter sp. GAI101]
Length = 203
Score = 210 bits (534), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 133/190 (70%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F + A SPLA+R+F++ G+ V+FG DF
Sbjct: 18 MFIQTESTPNPATLKFLPGQTVLEMGTADFPAPEAASSSPLATRLFAVDGVTGVFFGTDF 77
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+HL+P +LG IMEHF SG ++ G G + D A+V
Sbjct: 78 VTVTKADTIEWDHLKPALLGAIMEHFQSGQSVMEQG-----HEHASGHAEHTGEDGAIVG 132
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 133 QIKELLDSRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 192
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 193 IPEVTEVRPV 202
>gi|89068101|ref|ZP_01155518.1| Nitrogen-fixing NifU [Oceanicola granulosus HTCC2516]
gi|89046340|gb|EAR52397.1| Nitrogen-fixing NifU [Oceanicola granulosus HTCC2516]
Length = 186
Score = 209 bits (533), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 135/190 (71%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL G F++ + A SPLA RIFS+ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGEAVLDAGTADFASPEAANTSPLARRIFSVQGVTGVFFGTDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD+ +W+H++P +LG IMEH+ SG P++ G G G + D +V
Sbjct: 61 VTVTKDEATEWDHVKPAILGAIMEHYQSGAPVV-EGAEGAT-----GHAEHTGEDGEIVA 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVVEVRPV 184
>gi|163797123|ref|ZP_02191078.1| nitrogen-fixing NifU-like protein [alpha proteobacterium BAL199]
gi|159177639|gb|EDP62192.1| nitrogen-fixing NifU-like protein [alpha proteobacterium BAL199]
Length = 187
Score = 209 bits (533), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/188 (52%), Positives = 131/188 (69%), Gaps = 7/188 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE+TPNPATLKF+PG+ V+ G F + E SPLA +F + G+ V+ GYDF
Sbjct: 1 MFIQTEETPNPATLKFLPGRQVMESGTAEFKSEDETARSPLAQALFQVDGVTGVFLGYDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I+V K D +W ++P VLG+IMEHF++G P I G +D G D+ +V
Sbjct: 61 ISVSKHDGKEWYLMKPGVLGVIMEHFVAGRPTIVEDGASASAPEDAGE------DTEIVS 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA DGGDI F+GY DG+V L M+GACSGCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDTRVRPAVAMDGGDITFQGYEDGVVTLQMQGACSGCPSSTATLKMGIENMLRHY 174
Query: 180 VPEVKDIR 187
+PEV+++R
Sbjct: 175 IPEVREVR 182
>gi|163852613|ref|YP_001640656.1| scaffold protein Nfu/NifU [Methylobacterium extorquens PA1]
gi|218531454|ref|YP_002422270.1| Scaffold protein Nfu/NifU [Methylobacterium chloromethanicum CM4]
gi|240139947|ref|YP_002964424.1| NifU-like protein [Methylobacterium extorquens AM1]
gi|254562372|ref|YP_003069467.1| NifU-like [Methylobacterium extorquens DM4]
gi|163664218|gb|ABY31585.1| Scaffold protein Nfu/NifU [Methylobacterium extorquens PA1]
gi|218523757|gb|ACK84342.1| Scaffold protein Nfu/NifU [Methylobacterium chloromethanicum CM4]
gi|240009921|gb|ACS41147.1| NifU-like protein [Methylobacterium extorquens AM1]
gi|254269650|emb|CAX25622.1| NifU-like [Methylobacterium extorquens DM4]
Length = 188
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 138/192 (71%), Gaps = 7/192 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL +G + AE SPLA+ +F++PG++ VYFG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRVVLTDGTFEARDTASAERSPLATALFAVPGVSGVYFGHDF 60
Query: 61 ITVGKDQ--YDWEHLRPPVLGMIMEHFISGDPIIHNG-GLGDMKLDDMGSGDFIESDSAV 117
I+V K +W ++P VLG IM+HF SG P++ G L + + ++ + E+D
Sbjct: 61 ISVTKADGVNEWPQVKPAVLGAIMDHFQSGRPVLAEGTALAEDETEEF----YDEADHDT 116
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IK++L+ RVRPAVA DGGDI F+GYRDGIV+L M+GACSGCPS++ TL+ GV N+
Sbjct: 117 VVTIKDLLETRVRPAVAGDGGDITFRGYRDGIVYLEMKGACSGCPSSTATLRQGVQNLFR 176
Query: 178 HFVPEVKDIRTV 189
HF+P V++++ +
Sbjct: 177 HFLPSVREVQAI 188
>gi|332557651|ref|ZP_08411973.1| Nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides WS8N]
gi|332275363|gb|EGJ20678.1| Nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides WS8N]
Length = 186
Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 137/190 (72%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ+VL G F+ + A SPLA RIF++ G+++V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQMVLEAGTADFATPEAAATSPLARRIFAVGGVSAVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+ V K D+ W+H++P +LG IMEH+ SG P++ G+ S D + D VV+
Sbjct: 61 VAVTKADEVAWDHIKPAILGAIMEHYQSGAPVLE----GEQAASGHASHDGPDED--VVR 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVLEVRPV 184
>gi|90420546|ref|ZP_01228453.1| putative nitrogen-fixing NifU domain protein [Aurantimonas
manganoxydans SI85-9A1]
gi|90335274|gb|EAS49027.1| putative nitrogen-fixing NifU domain protein [Aurantimonas
manganoxydans SI85-9A1]
Length = 191
Score = 208 bits (530), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 127/180 (70%), Gaps = 3/180 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHF-SNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VVL G F S A SPLA+R+ +PG+ V+FGYD
Sbjct: 1 MFIQTEVTPNPATLKFLPGRVVLESGTEEFLSKEDAANRSPLAARLMDVPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
F+TV KD DW+HL+P +L +MEHF+ +P++ G D G F D V
Sbjct: 61 FVTVSKDGPDWQHLKPAILAGLMEHFMGNEPVMTAQGSNAAMPD--GEEFFEPGDEGTVA 118
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA+DGGDI F+GYRDG V+L+MRGAC+GCPS++ TLK+G+ N+L HF
Sbjct: 119 TIKELLETRVRPAVAQDGGDITFRGYRDGTVYLNMRGACAGCPSSTATLKHGIQNLLRHF 178
>gi|149913250|ref|ZP_01901784.1| NifU-like domain protein [Roseobacter sp. AzwK-3b]
gi|149813656|gb|EDM73482.1| NifU-like domain protein [Roseobacter sp. AzwK-3b]
Length = 187
Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/193 (52%), Positives = 136/193 (70%), Gaps = 12/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F A+ ++ SPLA+R+F + G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEAGTADFPTAEASDKSPLATRLFGVKGVRGVFFGNDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD-DMGSGDFIES--DSA 116
+TV K D +W+H++P +LG IMEHF SG P+ M +D + SG DS
Sbjct: 61 VTVTKTDDAEWDHIKPSILGAIMEHFQSGQPV--------MAVDAEHASGHAAHEGEDSE 112
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+V +IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L
Sbjct: 113 IVGQIKELLDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTITLKMGIENLL 172
Query: 177 NHFVPEVKDIRTV 189
H++PEV ++R V
Sbjct: 173 RHYIPEVTEVRPV 185
>gi|170741563|ref|YP_001770218.1| scaffold protein Nfu/NifU [Methylobacterium sp. 4-46]
gi|168195837|gb|ACA17784.1| Scaffold protein Nfu/NifU [Methylobacterium sp. 4-46]
Length = 187
Score = 208 bits (529), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 100/191 (52%), Positives = 136/191 (71%), Gaps = 6/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL +G + +A SPLA +F++PG+A VYFG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGKVVLTDGTFEARSPDQAAPSPLARALFAVPGVAGVYFGHDF 60
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
I+V K D +W ++P VLG IMEHF+SG P++ G F E+D+ V
Sbjct: 61 ISVTKAEDGSEWPQVKPAVLGAIMEHFLSGAPVLDAG----AAPAAPAEEFFAEADADTV 116
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IK++L+ RVRPAVA DGGDI F+GYR+G+V+L M+GACSGCPS++ TL+ GV N+ H
Sbjct: 117 ATIKDLLETRVRPAVAGDGGDITFRGYREGVVYLEMKGACSGCPSSTATLRQGVQNLFRH 176
Query: 179 FVPEVKDIRTV 189
F+PEV++++ V
Sbjct: 177 FLPEVREVQAV 187
>gi|159045379|ref|YP_001534173.1| hypothetical protein Dshi_2839 [Dinoroseobacter shibae DFL 12]
gi|157913139|gb|ABV94572.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 187
Score = 207 bits (528), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 136/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA RIF++ G+ +V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLETGTADFPSAEAAGSSPLAGRIFAVNGVTAVFFGTDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD+ +W+H++P VLG +MEH+ SGD ++ G+ G DS +V
Sbjct: 61 VTVTKDEGVEWDHIKPAVLGAVMEHYQSGDAVM----TGEASAP-AGHAAHDGPDSEIVG 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVLEVRPV 185
>gi|126461658|ref|YP_001042772.1| NifU domain-containing protein [Rhodobacter sphaeroides ATCC 17029]
gi|221638629|ref|YP_002524891.1| nitrogen-fixing NifU domain-containing protein [Rhodobacter
sphaeroides KD131]
gi|126103322|gb|ABN76000.1| nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides ATCC
17029]
gi|221159410|gb|ACM00390.1| Nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides KD131]
Length = 186
Score = 207 bits (527), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 136/190 (71%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ+VL G F+ + A SPLA RIF+ G+++V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQMVLEAGTADFATPEAAATSPLARRIFAAGGVSAVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+ V K D+ W+H++P +LG IMEH+ SG P++ G+ S D + D VV+
Sbjct: 61 VAVTKADEVAWDHIKPAILGAIMEHYQSGAPVLE----GEQAASGHASHDGPDED--VVR 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVLEVRPV 184
>gi|217979031|ref|YP_002363178.1| Scaffold protein Nfu/NifU [Methylocella silvestris BL2]
gi|217504407|gb|ACK51816.1| Scaffold protein Nfu/NifU [Methylocella silvestris BL2]
Length = 187
Score = 207 bits (526), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 134/190 (70%), Gaps = 4/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+TE TPNP TLKF+PG+ V+ G + ++A SPLA +F + G+ V+FG DF
Sbjct: 1 MFIETETTPNPKTLKFLPGRPVMSAGTLDIKEPEDARQSPLAEALFELDGVKGVFFGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI-ESDSAVVQ 119
ITV DW+ L+P VLG IMEHF+SGDP+++ D G +F ESD+ V
Sbjct: 61 ITVTNANEDWQELKPTVLGAIMEHFLSGDPLLNEHA---HVSPDAGEREFFEESDAETVT 117
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IK++++ VRPAVA DGGDI F+GYRDGIV+L+M+G+CSGCPS++ TLK+G+ N+L H+
Sbjct: 118 AIKQLIETHVRPAVANDGGDIKFRGYRDGIVYLAMKGSCSGCPSSTATLKHGIQNLLKHY 177
Query: 180 VPEVKDIRTV 189
VP+V+ + ++
Sbjct: 178 VPDVQSVESI 187
>gi|323138525|ref|ZP_08073593.1| Scaffold protein Nfu/NifU [Methylocystis sp. ATCC 49242]
gi|322396159|gb|EFX98692.1| Scaffold protein Nfu/NifU [Methylocystis sp. ATCC 49242]
Length = 187
Score = 207 bits (526), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 141/190 (74%), Gaps = 4/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL +GA+ F + A +PLA + +I G+ +V +G DF
Sbjct: 1 MFIQTETTPNPATLKFLPGQDVLGQGAMEFRSPDAAANAPLAQALLAIDGVQAVMYGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE-SDSAVVQ 119
++V KD DW HL+P +LG IMEHF SG P++ G G + +D G+F + SD+ V
Sbjct: 61 VSVTKDGADWAHLKPAILGTIMEHFASGAPLLTEGAAGAQQHED---GEFYDPSDAETVA 117
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ RVRPAVA DGGDIVF+G+RDG+V+L+M+GACSGCPS++ TL+ G+ N+L HF
Sbjct: 118 TIKELIETRVRPAVAGDGGDIVFRGFRDGVVYLTMKGACSGCPSSTATLRNGIENLLRHF 177
Query: 180 VPEVKDIRTV 189
+P++K +++
Sbjct: 178 LPQIKAVQSA 187
>gi|84683414|ref|ZP_01011317.1| nifU domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84668157|gb|EAQ14624.1| nifU domain protein [Rhodobacterales bacterium HTCC2654]
Length = 186
Score = 207 bits (526), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 134/190 (70%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA R+F++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQEVLEAGTADFPSAEAAAKSPLAQRVFAVNGVKGVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+H++P +LG IMEHF SG P++ G + G D+ +V
Sbjct: 61 VTVTKADDVEWDHVKPAILGAIMEHFQSGAPVMGEGPREAAHAEHDGP------DAEIVV 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK++LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKDLLDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLKHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVTEVRPV 184
>gi|67633331|gb|AAY78582.1| predicted thioredoxin-like protein [uncultured bacterium
MedeBAC82F10]
Length = 185
Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 132/190 (69%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MF+QTE TPNPATLKF+PG+ V+ EG I F N A SPLA +F+I G+ SV+FG DF
Sbjct: 1 MFVQTEPTPNPATLKFLPGREVMKEGTIFFQNQDSAVNSPLAQNLFNIKGVESVFFGSDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
IT+ K + +W ++P +LG I+EHF P+I K + E+DS VV+
Sbjct: 61 ITITKAEANEWTLMKPAILGCIIEHFTMNKPVIS-------KQAPRTEHTYDENDSDVVK 113
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD +VRPAVA DGGDI+F Y +GIVFL M+GAC GCPS++ TLK G+ N+L H+
Sbjct: 114 KIKELLDTKVRPAVAMDGGDIIFDKYNEGIVFLQMQGACQGCPSSTATLKMGIENMLKHY 173
Query: 180 VPEVKDIRTV 189
+PEV+++R V
Sbjct: 174 IPEVREVRPV 183
>gi|255264504|ref|ZP_05343846.1| NifU domain protein [Thalassiobium sp. R2A62]
gi|255106839|gb|EET49513.1| NifU domain protein [Thalassiobium sp. R2A62]
Length = 187
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 135/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ AE SPLA RIF++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLDMGTADFPSAEAAEKSPLAKRIFAVEGVTGVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+H++P +LG +MEH+ SG +I G+ G + D+ +V
Sbjct: 61 VTVTKGDDIEWDHIKPAILGAVMEHYQSGAAVID----GEAPTSG-GHAEHTGEDAEIVG 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFLGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVLEVRPV 185
>gi|27375911|ref|NP_767440.1| hypothetical protein bll0800 [Bradyrhizobium japonicum USDA 110]
gi|27349049|dbj|BAC46065.1| bll0800 [Bradyrhizobium japonicum USDA 110]
Length = 189
Score = 204 bits (519), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 96/187 (51%), Positives = 138/187 (73%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+VV+ + F++ + A SPLA ++F +PG+ V++G DF
Sbjct: 1 MFIQTEATPNPATLKFIPGRVVVDGSPMEFASRESAARSPLAEKLFEVPGVTGVFYGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
ITV K +W+ L+P +LG IMEH++SG P++ +G D F E+D+ V
Sbjct: 61 ITVTKANGEWQQLKPAILGAIMEHYMSGAPLLADGAAQSDADLDDEDEFFDEADAETVDM 120
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IK++++ RVRPAVA DGGDI F+G++DGIV+L+M+GACSGCPS++ TL++G+ N+L HFV
Sbjct: 121 IKDLIETRVRPAVANDGGDITFRGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKHFV 180
Query: 181 PEVKDIR 187
P+V ++R
Sbjct: 181 PDVVEVR 187
>gi|114769272|ref|ZP_01446898.1| nifU domain protein [alpha proteobacterium HTCC2255]
gi|114550189|gb|EAU53070.1| nifU domain protein [alpha proteobacterium HTCC2255]
Length = 186
Score = 204 bits (519), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 132/190 (69%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ V+ G F + + SPLA RIF++ G +V+ G DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVMNMGTADFPSPQAGSSSPLAKRIFAVDGATAVFLGPDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+T+ K + DW+H++P +LG IMEHF SG P+I + + G + DS +V
Sbjct: 61 VTITKTEDADWDHIKPALLGAIMEHFQSGQPVIEG------EDNSGGHAEHTGEDSDIVN 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK++LD RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKDLLDTRVRPAVAQDGGDITFHGFERGIVYLHMQGACAGCPSSTITLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVTEVRPV 184
>gi|119383283|ref|YP_914339.1| NifU domain-containing protein [Paracoccus denitrificans PD1222]
gi|119373050|gb|ABL68643.1| nitrogen-fixing NifU domain protein [Paracoccus denitrificans
PD1222]
Length = 184
Score = 203 bits (517), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 128/190 (67%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL G F A SPLA RIF++PG+ V+ G DF
Sbjct: 1 MFIQTETTPNPATLKFLPGETVLGSGTADFPAPDTAAASPLARRIFAVPGVTGVFLGSDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + W+HL+P VLG IMEH+ SG P I G D D+ +V
Sbjct: 61 VTVTKAEDAVWDHLKPSVLGAIMEHYQSGAPAIEGATAS-------GHNDQDGPDAEIVN 113
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 114 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 173
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 174 IPEVTEVRPV 183
>gi|296533479|ref|ZP_06896057.1| NifU domain protein [Roseomonas cervicalis ATCC 49957]
gi|296266192|gb|EFH12239.1| NifU domain protein [Roseomonas cervicalis ATCC 49957]
Length = 187
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 135/191 (70%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL-VEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFI+TE TPNPATLKF+PGQ V+ G F+NA A SPLA R+F + G+A ++ G D
Sbjct: 1 MFIETEATPNPATLKFLPGQDVMGSRGTADFTNAGAAARSPLAERLFGLEGVARIFLGSD 60
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ L+P VLG IMEH ++G P++ GD L+D +D+ +V
Sbjct: 61 FITVTKAEGVEWQALKPQVLGAIMEHVMAGRPVVLEEE-GDAALEDSDP-----ADAEIV 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+IKE+LD RVRPAVA DGGDIVF+G+RDGIV L ++GACSGCPS+ TLK+GV N+L H
Sbjct: 115 AQIKELLDTRVRPAVAGDGGDIVFRGFRDGIVKLHLQGACSGCPSSRATLKHGVENMLRH 174
Query: 179 FVPEVKDIRTV 189
+VPEV + V
Sbjct: 175 YVPEVMAVEQV 185
>gi|163744246|ref|ZP_02151606.1| NifU-like domain protein [Oceanibulbus indolifex HEL-45]
gi|161381064|gb|EDQ05473.1| NifU-like domain protein [Oceanibulbus indolifex HEL-45]
Length = 186
Score = 203 bits (516), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 130/193 (67%), Gaps = 12/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F SPLA R+F++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEMGTADFPTPDAGATSPLAQRLFAVEGVTGVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPII---HNGGLGDMKLDDMGSGDFIESDSA 116
+TV K D +W+H++P +LG IMEHF SGD ++ H G D D
Sbjct: 61 VTVTKQDAVEWDHVKPALLGAIMEHFQSGDAVMASDHQPTSGHAAHDG--------EDGE 112
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+V +IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L
Sbjct: 113 IVGQIKELLDSRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLL 172
Query: 177 NHFVPEVKDIRTV 189
H++PEV ++R V
Sbjct: 173 RHYIPEVTEVRPV 185
>gi|75674208|ref|YP_316629.1| nitrogen-fixing NifU [Nitrobacter winogradskyi Nb-255]
gi|74419078|gb|ABA03277.1| nitrogen-fixing NifU [Nitrobacter winogradskyi Nb-255]
Length = 190
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 134/180 (74%), Gaps = 1/180 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL +G + F++A SPLA ++F++ G+A V++G DF
Sbjct: 1 MFIQTEITPNPATLKFLPGRTVLGKGTMEFTSASTTARSPLAVKLFAVHGVAGVFYGSDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV KD+ DW+HL+P +LG+IMEH+++G P++ +G D F E+D+ V
Sbjct: 61 ITVTKDEGSDWQHLKPAILGVIMEHYMAGAPLLADGEGCSEANADSDVEFFDEADAETVT 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IK++++ RVRP VA DGGDI F+G+RDGIV+++M+GACSGCPS++ TL+ G+ N+L HF
Sbjct: 121 LIKDLIETRVRPGVADDGGDITFRGFRDGIVYVNMKGACSGCPSSTVTLRNGIQNLLKHF 180
>gi|84515908|ref|ZP_01003269.1| nifU domain protein [Loktanella vestfoldensis SKA53]
gi|84510350|gb|EAQ06806.1| nifU domain protein [Loktanella vestfoldensis SKA53]
Length = 187
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 134/190 (70%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F NA+ A+ SPLA RIF+ G++ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQNVLEVGTADFPNAEAAQHSPLAQRIFAAGGVSGVFFGIDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+H++P +LG IMEH+ SG ++ D K G + D +V
Sbjct: 61 VTVTKADGAEWDHIKPGILGAIMEHYQSGQSVM----AADHKPVS-GHAEHSGEDGDIVT 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVIEVRPV 185
>gi|114326814|ref|YP_743971.1| Fe-S cluster assembly protein NFU [Granulibacter bethesdensis
CGDNIH1]
gi|114314988|gb|ABI61048.1| Fe-S cluster assembly protein NFU [Granulibacter bethesdensis
CGDNIH1]
Length = 186
Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 132/190 (69%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+TE TPNPATLKF+PG+ V+ G F++A A+ SPLA +F +PGIA V+ G DF
Sbjct: 1 MFIETEGTPNPATLKFLPGRDVMPGGTADFASAATAQRSPLALALFELPGIARVFLGADF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K +W L+P VL +M+HF++G P++++ D+ D D +V
Sbjct: 61 VTVTKSSDVEWPELKPQVLAALMDHFVTGRPVLND------TPSDVLEEDIRPEDREIVD 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA DGGDIVF+GYRDG+V L M+GACSGCPS+ TLK+G+ N+L H+
Sbjct: 115 QIKELLDTRVRPAVAGDGGDIVFRGYRDGVVLLHMQGACSGCPSSRATLKHGIENMLRHY 174
Query: 180 VPEVKDIRTV 189
VPEV + V
Sbjct: 175 VPEVLAVEQV 184
>gi|126734863|ref|ZP_01750609.1| NifU-like domain protein [Roseobacter sp. CCS2]
gi|126715418|gb|EBA12283.1| NifU-like domain protein [Roseobacter sp. CCS2]
Length = 187
Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 131/190 (68%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ AE SPLA RIF G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQNVLEVGTADFPSAEAAENSPLAKRIFDAGGVTGVFFGIDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+H++P +LG IMEH+ SG + + + G + D +V
Sbjct: 61 VTVTKADDVEWDHIKPGILGAIMEHYQSGQSV-----MAEDHKPVSGHAEHTGEDGEIVG 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFERGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVVEVRPV 185
>gi|254453730|ref|ZP_05067167.1| NifU domain protein [Octadecabacter antarcticus 238]
gi|198268136|gb|EDY92406.1| NifU domain protein [Octadecabacter antarcticus 238]
Length = 186
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 131/190 (68%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F + + A SPLA RIF + G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQNVLEVGTADFPSVEAAGKSPLAGRIFGVEGVTGVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K D +W+H++P +LG +MEH+ SG ++ G G + D+ +V
Sbjct: 61 ITVTKADDVEWDHIKPAILGAVMEHYQSGAAVMTGEQAGS------GHAEHTGEDADIVN 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVVEVRPV 184
>gi|170747078|ref|YP_001753338.1| scaffold protein Nfu/NifU [Methylobacterium radiotolerans JCM 2831]
gi|170653600|gb|ACB22655.1| Scaffold protein Nfu/NifU [Methylobacterium radiotolerans JCM 2831]
Length = 188
Score = 202 bits (513), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/191 (52%), Positives = 142/191 (74%), Gaps = 5/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL E +A+ A SPLA+ +F++PG+A VYFG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRVVLAESTFEARDAEAAARSPLAAALFTVPGVAGVYFGHDF 60
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
I+V K D +W ++P VLG IMEHF SG P++ GG G++ + G + E+D V
Sbjct: 61 ISVTKAEDGSEWAQVKPAVLGAIMEHFQSGAPVMAEGGHGEI---EPGDEFYDEADHDTV 117
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IK++L+ RVRPAVA DGGDI F+GY++G+V+L M+GACSGCPS++ TL++GV N+ H
Sbjct: 118 VTIKDLLETRVRPAVAGDGGDITFRGYKEGVVYLEMKGACSGCPSSTATLRHGVQNLFRH 177
Query: 179 FVPEVKDIRTV 189
F+PE+++++ +
Sbjct: 178 FLPEIREVQAI 188
>gi|254454487|ref|ZP_05067924.1| NifU domain protein [Octadecabacter antarcticus 238]
gi|198268893|gb|EDY93163.1| NifU domain protein [Octadecabacter antarcticus 238]
Length = 183
Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 134/190 (70%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQ++ TPNPATLKF+PG V+ +G + F ++A SPLAS++F + G+ V+FG DF
Sbjct: 1 MFIQSQQTPNPATLKFLPGVAVMEQGTVSFPTREDAARSPLASQLFDVNGVDGVFFGGDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K D DW L+P +LG IMEHF SG P+++ D + D D D +V
Sbjct: 61 ITVTKTDDMDWTPLKPAILGAIMEHFTSGQPLLNE----DASMSDHAVSD---DDDELVT 113
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI+F G+ G+V+L ++GACSGCPS++ TLK G+ N+L H+
Sbjct: 114 QIKELLDTRVRPAVAQDGGDILFHGFERGVVYLQLQGACSGCPSSTATLKGGIENMLRHY 173
Query: 180 VPEVKDIRTV 189
+P+V ++R +
Sbjct: 174 IPDVIEVRAI 183
>gi|146278315|ref|YP_001168474.1| NifU domain-containing protein [Rhodobacter sphaeroides ATCC 17025]
gi|145556556|gb|ABP71169.1| nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides ATCC
17025]
Length = 186
Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 136/190 (71%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ+VL G F++A+ A SPLA RIF G+ASV+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQMVLEAGTADFASAEAAATSPLARRIFGAGGVASVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I V K D+ W+H++P +LG IMEH+ SG P++ G+ + D D +V+
Sbjct: 61 IAVTKEDEVVWDHVKPAILGAIMEHYQSGAPVLE----GEQAASGHATHD--GPDEEIVR 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVLEVRPV 184
>gi|77462766|ref|YP_352270.1| nitrogen-fixing NifU [Rhodobacter sphaeroides 2.4.1]
gi|77387184|gb|ABA78369.1| Nitrogen-fixing NifU [Rhodobacter sphaeroides 2.4.1]
Length = 186
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 137/190 (72%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ+VL G F+ A+ A SPLA RIF+ G+++V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQMVLEAGTADFATAEAAATSPLARRIFAAGGVSAVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+ V K D+ W+H++P +LG IMEH+ SG P++ G+ S D + D VV+
Sbjct: 61 VAVTKADEVAWDHIKPAILGAIMEHYQSGAPVLE----GEQAASGHASHDGPDED--VVR 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVLEVRPV 184
>gi|83594860|ref|YP_428612.1| nitrogen-fixing NifU-like [Rhodospirillum rubrum ATCC 11170]
gi|83577774|gb|ABC24325.1| Nitrogen-fixing NifU-like [Rhodospirillum rubrum ATCC 11170]
Length = 183
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 136/190 (71%), Gaps = 9/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPA+LKF+PG+ VL G F++ A SPLA R+F+I G+ +Y G DF
Sbjct: 1 MFIQTERTPNPASLKFLPGKAVLPGGGRDFADVGAAGPSPLARRLFAIDGVTGIYLGADF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K + DW+ ++P VLG IMEHF SG+P++ G + GS + D VV+
Sbjct: 61 ITVSKAEAEDWQVIKPLVLGAIMEHFTSGEPVLIAG----TAAESAGSAE----DDEVVR 112
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+I+++L+ RVRPAVA+DGGDIVF ++DG+V+L +RG+CSGCPS++ TLK+G+ N+L H+
Sbjct: 113 QIRDLLETRVRPAVAQDGGDIVFDRFQDGVVYLHLRGSCSGCPSSTATLKHGIENMLRHY 172
Query: 180 VPEVKDIRTV 189
+PEV+ + V
Sbjct: 173 IPEVEAVEAV 182
>gi|92115649|ref|YP_575378.1| nitrogen-fixing NifU-like [Nitrobacter hamburgensis X14]
gi|91798543|gb|ABE60918.1| nitrogen-fixing NifU-like protein [Nitrobacter hamburgensis X14]
Length = 191
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 131/181 (72%), Gaps = 2/181 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL +G + F+ A S LA R+F++ G+ V++G DF
Sbjct: 1 MFIQTEVTPNPATLKFLPGRTVLGKGTMEFNGPDTAGRSQLAVRLFAVHGVTGVFYGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLG--DMKLDDMGSGDFIESDSAVV 118
ITV KD DW+HL+P +LG+IMEH++SG P++ +G D D F E+D+ V
Sbjct: 61 ITVTKDASDWQHLKPAILGVIMEHYMSGAPLLADGETAGNDEANKDEAVEFFDEADAETV 120
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IK++++ RVRP VA DGGDI F+G++DG+V+++M+G+CSGCPS++ TL+ G+ N+L H
Sbjct: 121 TLIKDLIETRVRPGVADDGGDITFRGFKDGVVYVNMKGSCSGCPSSTVTLRNGIQNLLKH 180
Query: 179 F 179
F
Sbjct: 181 F 181
>gi|329114732|ref|ZP_08243489.1| Scaffold Protein Nfu/NifU [Acetobacter pomorum DM001]
gi|326695863|gb|EGE47547.1| Scaffold Protein Nfu/NifU [Acetobacter pomorum DM001]
Length = 186
Score = 198 bits (503), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 136/192 (70%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE-GAIHFSNAKE-AEISPLASRIFSIPGIASVYFGY 58
MFI+TE TPNPATLKF+PGQ V+ + G I F +A A SPLA +F++PG++ V+ G
Sbjct: 1 MFIETEGTPNPATLKFLPGQAVMGDAGTIDFIDADAVAGRSPLAEALFALPGVSRVFLGN 60
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
DF++V K D DWE LRP +L +M+HF++G P++ G + + + + D +
Sbjct: 61 DFVSVTKADSEDWEELRPQILSTLMDHFVAGHPVVAEG----VAVTEDATA---PEDEEI 113
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +IKE+LD RVRPAVA DGGDIVF+GYR+GIV L+M+GACSGCPS+ TLK+GV N+L
Sbjct: 114 VTQIKELLDTRVRPAVAGDGGDIVFRGYRNGIVRLTMQGACSGCPSSRATLKHGVENMLR 173
Query: 178 HFVPEVKDIRTV 189
H+VPEV + V
Sbjct: 174 HYVPEVVSVEQV 185
>gi|209965893|ref|YP_002298808.1| NifU-like domain protein [Rhodospirillum centenum SW]
gi|209959359|gb|ACI99995.1| NifU-like domain protein [Rhodospirillum centenum SW]
Length = 186
Score = 197 bits (502), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 132/190 (69%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE+TPNPATLKF+PG+ VL G F+ + A SPLA+R+F + G+ V+ G DF
Sbjct: 1 MFIQTEETPNPATLKFLPGRDVLGRGTADFAGPETAGPSPLAARLFEVEGVTRVFLGADF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + DW L+P VLG++MEHF +G P++ G DD + D VV
Sbjct: 61 VTVTKTEDKDWYALKPSVLGVLMEHFTAGRPVLLEG-----TADDGHAEAANAEDEEVVA 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDIRVRPAVAQDGGDITFHGFDKGVVYLHMKGACAGCPSSTATLKAGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVVEVRQV 185
>gi|295687469|ref|YP_003591162.1| Scaffold protein Nfu/NifU [Caulobacter segnis ATCC 21756]
gi|295429372|gb|ADG08544.1| Scaffold protein Nfu/NifU [Caulobacter segnis ATCC 21756]
Length = 191
Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 129/190 (67%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF+PG+ VLVEGA F A+E E SPLA +F + + V+FG DF
Sbjct: 1 MFIQTETTPNPEVLKFLPGREVLVEGAREFRTAEEGEASPLAKALFDLGDVTRVFFGPDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + W HL+ P+L IM+HF SG P++ + G +D G + E S +V
Sbjct: 61 LTVTKGEAAQWPHLKAPILAAIMDHFTSGRPLLLDAEPGGGHDED---GVYDEEASQIVA 117
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+LD R+RPAVA+DGGDIVF + + G+V+L MRGACSGCPS+S TLK GV N+L
Sbjct: 118 EIKELLDTRIRPAVAQDGGDIVFSRFEPQTGVVWLHMRGACSGCPSSSATLKAGVENMLK 177
Query: 178 HFVPEVKDIR 187
H+VPEV +
Sbjct: 178 HYVPEVTRVE 187
>gi|85714190|ref|ZP_01045179.1| nitrogen-fixing NifU [Nitrobacter sp. Nb-311A]
gi|85699316|gb|EAQ37184.1| nitrogen-fixing NifU [Nitrobacter sp. Nb-311A]
Length = 190
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 135/181 (74%), Gaps = 3/181 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL + + F++A SPLA ++F++ G+ V++G DF
Sbjct: 1 MFIQTEITPNPATLKFLPGRTVLGKDTMEFTSASTTARSPLAVKLFAVHGVTGVFYGSDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI-ESDSAVV 118
ITV KD DW+HL+P +LG+IMEH++SG P++ + G G+ + + +F E+D+ V
Sbjct: 61 ITVTKDDASDWQHLKPAILGVIMEHYMSGAPLLADDG-GNTEPNAENDVEFFDEADAETV 119
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IK++++ RVRP VA DGGDI F+G++DG+V+++M+GACSGCPS++ TL+ G+ N+L H
Sbjct: 120 TLIKDLIETRVRPGVADDGGDITFRGFKDGVVYVNMKGACSGCPSSTVTLRNGIQNLLKH 179
Query: 179 F 179
F
Sbjct: 180 F 180
>gi|288959669|ref|YP_003450010.1| thioredoxin [Azospirillum sp. B510]
gi|288911977|dbj|BAI73466.1| thioredoxin [Azospirillum sp. B510]
Length = 185
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 133/190 (70%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL G F+ ++A SPLA R+F I G+ V+ G DF
Sbjct: 1 MFIQTEQTPNPATLKFLPGRDVLGRGTADFTGREDAARSPLAQRLFEIEGVVGVFLGADF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
IT+ K D DW L+P +LG+IMEHF + P++ + D + D +V+
Sbjct: 61 ITITKTDARDWFLLKPSILGVIMEHFTADRPVLLE------EGGDGHAAAASADDEEIVE 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRP+VA+DGGDI F+G+ G+V+L+M+GACSGCPS++ TLK+G+ N+L H+
Sbjct: 115 QIKELLDTRVRPSVAQDGGDITFQGFERGVVYLAMKGACSGCPSSTATLKHGIENMLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVVEVRAV 184
>gi|197106919|ref|YP_002132296.1| thioredoxin-like protein [Phenylobacterium zucineum HLK1]
gi|196480339|gb|ACG79867.1| thioredoxin-like protein [Phenylobacterium zucineum HLK1]
Length = 191
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 129/190 (67%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF+PG+ VL EG F + +EA+ SPLA+ IF I G+ V+FG DF
Sbjct: 1 MFIQTEATPNPEVLKFLPGRAVLGEGTRDFGSMEEAQASPLAADIFDIEGVTRVFFGPDF 60
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TVGK +DW HL+ PVL IM+HF SG P+ G D+ G + + +V
Sbjct: 61 LTVGKHPSFDWPHLKAPVLAAIMDHFTSGRPLFAEAGEQAGGHDE---GAYEGETAQIVA 117
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILN 177
IK++LD R+RPAVA+DGGDI+F + G+V+L+MRGACSGCPS++ TLK GV N+L
Sbjct: 118 EIKDLLDTRIRPAVAQDGGDILFHKFEPDTGVVWLNMRGACSGCPSSTATLKAGVENMLK 177
Query: 178 HFVPEVKDIR 187
H+VPEV +
Sbjct: 178 HYVPEVTRVE 187
>gi|258541120|ref|YP_003186553.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-01]
gi|256632198|dbj|BAH98173.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-01]
gi|256635255|dbj|BAI01224.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-03]
gi|256638310|dbj|BAI04272.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-07]
gi|256641364|dbj|BAI07319.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-22]
gi|256644419|dbj|BAI10367.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-26]
gi|256647474|dbj|BAI13415.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-32]
gi|256650527|dbj|BAI16461.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256653518|dbj|BAI19445.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-12]
Length = 186
Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 132/192 (68%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE-GAIHFSNAKE-AEISPLASRIFSIPGIASVYFGY 58
MFI+TE TPNPATLKF+PGQ V+ + G I F +A A S LA +F++PG++ V+ G
Sbjct: 1 MFIETEGTPNPATLKFLPGQAVMGDAGTIDFIDADAVAGRSSLAEALFALPGVSRVFLGN 60
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
DF++V K D DWE LRP +L +M+HF++G P++ G + D +
Sbjct: 61 DFVSVTKADSEDWEELRPQILSTLMDHFVAGHPVVAEGVA-------VTEDAIAPEDEEI 113
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +IKE+LD RVRPAVA DGGDIVF+GYR+GIV L+M+GACSGCPS+ TLK+GV N+L
Sbjct: 114 VTQIKELLDTRVRPAVAGDGGDIVFRGYRNGIVRLTMQGACSGCPSSRATLKHGVENMLR 173
Query: 178 HFVPEVKDIRTV 189
H+VPEV + V
Sbjct: 174 HYVPEVVSVEQV 185
>gi|148555295|ref|YP_001262877.1| scaffold protein Nfu/NifU-like protein [Sphingomonas wittichii RW1]
gi|148500485|gb|ABQ68739.1| Scaffold protein Nfu/NifU-like protein [Sphingomonas wittichii RW1]
Length = 192
Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 134/190 (70%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M I+TE TPNPATLKF+PG+ V+ G F + EA SPLA +FS+ + V+FG DF
Sbjct: 4 MLIETEPTPNPATLKFLPGRPVMTTGTRDFVDPDEASASPLAEALFSLGDVTGVFFGRDF 63
Query: 61 ITV-GKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAV 117
++V + +W L+P VLG++++HF S P+ G ++ +DD DF + +D+ +
Sbjct: 64 VSVTAAEGVEWTGLKPQVLGVLLDHFSSEAPLFTGGSAAEIAIDD---SDFTDDPADADI 120
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +IK+++D RVRPAVARDGGDIV++G++ G V+LSM+GACSGCPS++ TLK G+ +L
Sbjct: 121 VAQIKDLIDTRVRPAVARDGGDIVYRGFQRGTVYLSMQGACSGCPSSAATLKQGIETLLK 180
Query: 178 HFVPEVKDIR 187
H+VPEV ++R
Sbjct: 181 HYVPEVTEVR 190
>gi|294085162|ref|YP_003551922.1| nitrogen-fixing NifU domain-containing protein [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292664737|gb|ADE39838.1| nitrogen-fixing NifU domain protein [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 187
Score = 193 bits (491), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 129/189 (68%), Gaps = 6/189 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNPATLKFIPG VL +G F A A SP+A R+F + G+A V+ G DF
Sbjct: 1 MFIQTQDTPNPATLKFIPGVPVLEQGTADFPAADSAGSSPMARRLFQVDGVAGVFLGGDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I V K D+ DW L+P +L IMEHF SG P+I + G+M + + D V+
Sbjct: 61 IAVTKVDEMDWFALKPSILAGIMEHFASGLPVIEDNA-GNMTDANTDD----DEDDDTVK 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK +LD RVRPAVA DGGDIVF+ + DG+V L MRGAC GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKHLLDTRVRPAVAMDGGDIVFQDFDDGVVTLQMRGACQGCPSSTATLKMGIENMLKHY 175
Query: 180 VPEVKDIRT 188
+P+V+++R
Sbjct: 176 IPQVREVRA 184
>gi|221232999|ref|YP_002515435.1| mitochondrial-type Fe-S cluster assembly protein NFU [Caulobacter
crescentus NA1000]
gi|220962171|gb|ACL93527.1| mitochondrial-type Fe-S cluster assembly protein NFU [Caulobacter
crescentus NA1000]
Length = 190
Score = 191 bits (486), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 128/190 (67%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF+PG+ VL +GA F +E + SPLA +F + ++ V+FG DF
Sbjct: 1 MFIQTETTPNPEVLKFLPGREVLGDGAREFRTPEEGDASPLAKALFELGDVSRVFFGPDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + W HL+ P+L IM+HF SG P++ + D+ GD+ E S +V
Sbjct: 61 LTVTKGEDAQWPHLKAPILAAIMDHFTSGRPLLLDQTAESGGHDE---GDYDEETSQIVA 117
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+LD R+RPAVA+DGGDIVF + + G+V+L MRGACSGCPS+S TLK GV N+L
Sbjct: 118 EIKELLDTRIRPAVAQDGGDIVFSRFEPQTGVVWLHMRGACSGCPSSSATLKSGVENMLK 177
Query: 178 HFVPEVKDIR 187
H+VPEV +
Sbjct: 178 HYVPEVTRVE 187
>gi|16124317|ref|NP_418881.1| NifU-like domain-containing protein [Caulobacter crescentus CB15]
gi|13421157|gb|AAK22049.1| NifU-like domain protein [Caulobacter crescentus CB15]
Length = 224
Score = 191 bits (485), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/189 (50%), Positives = 128/189 (67%), Gaps = 6/189 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF+PG+ VL +GA F +E + SPLA +F + ++ V+FG DF
Sbjct: 35 MFIQTETTPNPEVLKFLPGREVLGDGAREFRTPEEGDASPLAKALFELGDVSRVFFGPDF 94
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + W HL+ P+L IM+HF SG P++ + D+ GD+ E S +V
Sbjct: 95 LTVTKGEDAQWPHLKAPILAAIMDHFTSGRPLLLDQTAESGGHDE---GDYDEETSQIVA 151
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+LD R+RPAVA+DGGDIVF + + G+V+L MRGACSGCPS+S TLK GV N+L
Sbjct: 152 EIKELLDTRIRPAVAQDGGDIVFSRFEPQTGVVWLHMRGACSGCPSSSATLKSGVENMLK 211
Query: 178 HFVPEVKDI 186
H+VPEV +
Sbjct: 212 HYVPEVTRV 220
>gi|23006361|ref|ZP_00048716.1| COG0694: Thioredoxin-like proteins and domains [Magnetospirillum
magnetotacticum MS-1]
Length = 184
Score = 190 bits (483), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 125/179 (69%), Gaps = 5/179 (2%)
Query: 13 TLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQ--YDW 70
TLKF+PG+VVL EG +A AE SPLAS +F++PG++ VYFG+DFI+V K +W
Sbjct: 9 TLKFLPGRVVLTEGTFEARDASSAERSPLASALFAVPGVSGVYFGHDFISVTKADGVNEW 68
Query: 71 EHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVR 130
++P VLG IM+HF SG P++ G +D + E+D V IK++L+ RVR
Sbjct: 69 PQVKPAVLGAIMDHFQSGRPVLAEG---TALAEDDAEEFYDEADHDTVATIKDLLETRVR 125
Query: 131 PAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
PAVA DGGDI F+GYRDGIV+L M+GACSGCPS++ TL+ GV N+ HF+P V++++ V
Sbjct: 126 PAVAGDGGDITFRGYRDGIVYLEMKGACSGCPSSTATLRQGVQNLFRHFLPSVREVQAV 184
>gi|167643992|ref|YP_001681655.1| scaffold protein Nfu/NifU [Caulobacter sp. K31]
gi|167346422|gb|ABZ69157.1| Scaffold protein Nfu/NifU [Caulobacter sp. K31]
Length = 189
Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 126/190 (66%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF+PG+ VL EGA F A+E + SPLA +F + + V+FG DF
Sbjct: 1 MFIQTETTPNPEVLKFLPGREVLGEGAREFKTAEEGDASPLAEALFRLGDVNRVFFGPDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + +W HL+ P+L IM+HF SG P++ L + G + E S +V
Sbjct: 61 LTVTKAEGAEWPHLKAPILAAIMDHFTSGRPLL----LDQAESGHDNDGVYDEETSQIVA 116
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILN 177
IK++LD R+RPAVA+DGGDIVF + G+V+L MRGACSGCPS+S TLK GV N+L
Sbjct: 117 EIKDLLDTRIRPAVAQDGGDIVFSKFEPATGVVWLHMRGACSGCPSSSATLKAGVENMLK 176
Query: 178 HFVPEVKDIR 187
H+VPEV +
Sbjct: 177 HYVPEVTRVE 186
>gi|296282499|ref|ZP_06860497.1| hypothetical protein CbatJ_02705 [Citromicrobium bathyomarinum
JL354]
Length = 192
Score = 188 bits (478), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 134/190 (70%), Gaps = 3/190 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M+I+TE TPNPATLKF+P + V+ +G F+N ++AE SPLA +F + V+FG DF
Sbjct: 1 MYIETETTPNPATLKFLPQRQVMPQGTRDFANPEDAEASPLAQALFDTGEVTGVFFGSDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKL--DDMGSGDFIESDSAV 117
++V K + W L+P ++ ++++HF+S P+ H G +++ +D + + +D+ +
Sbjct: 61 VSVTKGEGTQWTELKPQIVAVLLDHFVSEAPLFHGGSAAGIEVPAEDTLTVEEDPADADI 120
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +IKE+L+ R+RPAVA DGGDI ++GYRDG+V L ++GAC GCPS++ TLK+G+ +L
Sbjct: 121 VDQIKELLETRIRPAVAGDGGDIAYRGYRDGVVHLQLQGACDGCPSSTATLKHGIEGLLK 180
Query: 178 HFVPEVKDIR 187
H+VPEV ++R
Sbjct: 181 HYVPEVVEVR 190
>gi|103487552|ref|YP_617113.1| nitrogen-fixing NifU-like protein [Sphingopyxis alaskensis RB2256]
gi|98977629|gb|ABF53780.1| nitrogen-fixing NifU-like protein [Sphingopyxis alaskensis RB2256]
Length = 190
Score = 188 bits (477), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 136/191 (71%), Gaps = 3/191 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M I+TE TPNPATLKF+PG+ V+ G F++A+EAE SPLAS +FS+ + V+FG DF
Sbjct: 1 MLIETESTPNPATLKFLPGRTVMETGTRDFASAEEAEASPLASALFSLGDVTGVFFGRDF 60
Query: 61 ITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD-MKLDDMGSGDFIESDSAVV 118
++V +W ++P VLG++M+HF++G P+ + G + +D G D +D+ ++
Sbjct: 61 VSVTIAPGAEWADVKPDVLGIVMDHFLAGVPLFNAASAGSAVPPEDAGFAD-DPADADII 119
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++IKE+++ RVRPAVA DGGDIV++G+ G V+L M+GAC+GCPS++ TLK G+ ++L H
Sbjct: 120 EQIKELIETRVRPAVANDGGDIVYRGFDKGNVYLKMQGACAGCPSSTATLKNGIESLLKH 179
Query: 179 FVPEVKDIRTV 189
+VPEV + V
Sbjct: 180 YVPEVTAVHAV 190
>gi|326403969|ref|YP_004284051.1| hypothetical protein ACMV_18220 [Acidiphilium multivorum AIU301]
gi|325050831|dbj|BAJ81169.1| hypothetical protein ACMV_18220 [Acidiphilium multivorum AIU301]
Length = 185
Score = 188 bits (477), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 137/190 (72%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+T+ TPNPATLKF+PG+ VL +G+ F +A A SPLA +F++PG+ V+ G DF
Sbjct: 1 MFIETDVTPNPATLKFLPGREVLGQGSADFDSADAAAASPLAEALFALPGVVRVFLGADF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
++V +D+ +W L+P VLG IMEH++SG P++ ++D+ D +D +
Sbjct: 61 VSVTRDEGTEWTSLKPQVLGAIMEHYLSGRPVMAGA---QAEVDE----DVDPADREIAD 113
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA DGGDIVF+G+RDGIV L M+GACSGCPS++ TLK G+ N+L H+
Sbjct: 114 QIKELLDMRVRPAVAGDGGDIVFRGFRDGIVSLHMQGACSGCPSSTATLKMGIENLLKHY 173
Query: 180 VPEVKDIRTV 189
VPEVK +R V
Sbjct: 174 VPEVKSVRQV 183
>gi|144900396|emb|CAM77260.1| NifU domain protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 182
Score = 187 bits (475), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 140/191 (73%), Gaps = 12/191 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE+TPNP+TLKF+PG+ V+ G F +A+ A SPLA+++F++ G+ASV+ G DF
Sbjct: 1 MFIQTENTPNPSTLKFLPGREVMPAGTADFGSAEAAIRSPLAAKLFTVDGVASVFLGGDF 60
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGD-PIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITVGK + W L+P +L IM+ F +G P+I+ G + + G+ E+D +V
Sbjct: 61 ITVGKTEAATWGTLKPLLLSAIMDFFTAGLLPVINEG------TEKVSDGE--ETD--IV 110
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++IKE+LD RVRPAVA+DGGDI+F+ + DGIV++ ++GACSGCPS++ TLK+G+ N+L +
Sbjct: 111 RQIKELLDTRVRPAVAQDGGDIIFRSFDDGIVYVHLQGACSGCPSSTATLKHGIENMLKY 170
Query: 179 FVPEVKDIRTV 189
+VPEV ++ V
Sbjct: 171 YVPEVVAVQAV 181
>gi|94498004|ref|ZP_01304568.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. SKA58]
gi|94422587|gb|EAT07624.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. SKA58]
Length = 194
Score = 187 bits (475), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 135/192 (70%), Gaps = 4/192 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M I+TE TPNPAT+KFIPG+VV+ G F++ +EAE SPLAS +F++ + V+FG DF
Sbjct: 4 MLIETEPTPNPATVKFIPGRVVMGAGTRDFASPEEAEASPLASALFTLGDVTGVFFGGDF 63
Query: 61 ITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKL--DDMGSGDFIESDSAV 117
I+V + DW ++P VL +++EHF + P+ G G++ + DD + E D+ +
Sbjct: 64 ISVTIGEGSDWRDVKPEVLSILLEHFSANMPLFVAGSAGEIHVPADDDAFAENPE-DAEI 122
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +I+E++D RVRPAVA DGGDI+++G+ G V+L M+GAC+GCPS+S TLK G+ +L
Sbjct: 123 VDQIRELIDTRVRPAVANDGGDIIYRGFDKGTVYLKMQGACAGCPSSSATLKNGIEQLLK 182
Query: 178 HFVPEVKDIRTV 189
H+VPEV ++R V
Sbjct: 183 HYVPEVTEVRAV 194
>gi|148260770|ref|YP_001234897.1| NifU domain-containing protein [Acidiphilium cryptum JF-5]
gi|146402451|gb|ABQ30978.1| nitrogen-fixing NifU domain protein [Acidiphilium cryptum JF-5]
Length = 185
Score = 186 bits (473), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 136/190 (71%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+T+ TPNPATLKF+PG+ VL +G+ F +A A SPLA +F++PG+ V+ G DF
Sbjct: 1 MFIETDVTPNPATLKFLPGREVLGQGSADFDSADAAAASPLAEALFALPGVVRVFLGADF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
++V +D +W L+P VLG IMEH++SG P++ ++D+ D +D +
Sbjct: 61 VSVTRDDGTEWTSLKPQVLGAIMEHYLSGRPVMAGA---QAEVDE----DVDPADREIAD 113
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA DGGDIVF+G+RDGIV L M+GACSGCPS++ TLK G+ N+L H+
Sbjct: 114 QIKELLDMRVRPAVAGDGGDIVFRGFRDGIVSLHMQGACSGCPSSTATLKMGIENLLKHY 173
Query: 180 VPEVKDIRTV 189
VPEVK +R V
Sbjct: 174 VPEVKSVRQV 183
>gi|149186788|ref|ZP_01865099.1| hypothetical protein ED21_29856 [Erythrobacter sp. SD-21]
gi|148829696|gb|EDL48136.1| hypothetical protein ED21_29856 [Erythrobacter sp. SD-21]
Length = 193
Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 131/191 (68%), Gaps = 4/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+TE TPNPA+LKF+PG+ V+ +G F+N + AE SPLA IF + +V+FG DF
Sbjct: 1 MFIETETTPNPASLKFLPGRPVMGQGTREFANPEAAEASPLAQAIFDTGEVVNVFFGGDF 60
Query: 61 ITV-GKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA--- 116
ITV W L+P VL ++++HF+S P+ G G + + +E ++A
Sbjct: 61 ITVTSAPGVSWSDLKPQVLSILLDHFVSEAPLFVPGTAGGIAVPAEDEALLVEENAADAD 120
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+V +I E+L+ RVRPAVA DGGDI ++G++DG+V+L ++GACSGCPS++ TLK+G+ +L
Sbjct: 121 IVAQINELLETRVRPAVAGDGGDIQYRGFKDGVVYLQLQGACSGCPSSTATLKHGIEGLL 180
Query: 177 NHFVPEVKDIR 187
H+VPEV ++R
Sbjct: 181 KHYVPEVVEVR 191
>gi|190571129|ref|YP_001975487.1| NifU domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018533|ref|ZP_03334341.1| NifU domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357401|emb|CAQ54835.1| NifU domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995484|gb|EEB56124.1| NifU domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 190
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 133/191 (69%), Gaps = 4/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAI-HFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E+TPNP TLKF+PG +L EG FSNA E + S LA +F I + V+FG+D
Sbjct: 1 MFIQIEETPNPNTLKFLPGFEILSEGETADFSNADEIKNSKLAVNLFQIEHVVRVFFGHD 60
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K D+ +W+ ++ +L IM+HF SG G+ D K+ + F E+D +V
Sbjct: 61 FISVTKSDRMNWDIVKVEILTTIMDHFTSGGKAFDKEGVSDNKM--LEEEFFNENDIEIV 118
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
RIKE++++ ++PAVA+DGGDI F+GY+DGIV++ ++GACSGCPSA+ TLK GV N+L++
Sbjct: 119 NRIKELMESYIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLSY 178
Query: 179 FVPEVKDIRTV 189
+PEV I T+
Sbjct: 179 HIPEVSGIETM 189
>gi|330991171|ref|ZP_08315124.1| NFU1 iron-sulfur cluster scaffold-like protein [Gluconacetobacter
sp. SXCC-1]
gi|329761757|gb|EGG78248.1| NFU1 iron-sulfur cluster scaffold-like protein [Gluconacetobacter
sp. SXCC-1]
Length = 187
Score = 185 bits (470), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 128/193 (66%), Gaps = 12/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH--FSNAKEAEISPLASRIFSIPGIASVYFGY 58
MFI+TEDTPNPATLKF+PG+ ++ GA S A S LA +F + G+A V+FG
Sbjct: 1 MFIETEDTPNPATLKFLPGREIMANGATADFISPDSVAGRSRLAELLFDLDGVARVFFGA 60
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE-SDSA 116
DF+ V + D +WE LRP VL ++ ++ +G ++ + D D I D
Sbjct: 61 DFVAVTRSDSVEWEGLRPQVLAVLADYLATGQAVVES--------DAQVVEDLIAPGDEE 112
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+VQ+IKE+LD RVRPAVA DGGDIVF+GYRDG+V L+M+GACSGCPS+ TLK+GV N+L
Sbjct: 113 IVQQIKELLDTRVRPAVAGDGGDIVFRGYRDGVVRLTMQGACSGCPSSRATLKHGVENML 172
Query: 177 NHFVPEVKDIRTV 189
H+VPEV + V
Sbjct: 173 RHYVPEVVSVEQV 185
>gi|329847368|ref|ZP_08262396.1| scaffold protein Nfu/NifU [Asticcacaulis biprosthecum C19]
gi|328842431|gb|EGF92000.1| scaffold protein Nfu/NifU [Asticcacaulis biprosthecum C19]
Length = 188
Score = 184 bits (468), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 129/194 (66%), Gaps = 12/194 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP +KF+PGQVVL +G F + EA++SPLA +F I G+++++FG DF
Sbjct: 1 MFIQTEATPNPDVIKFLPGQVVLAQGTKQFVSEDEAKVSPLAEALFKIDGVSALFFGSDF 60
Query: 61 ITVGKD---QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+TV +D W L+PP+L IM+ + SG PI+ ++K + + G+ +
Sbjct: 61 LTVRRDPDATLIWAQLKPPILAAIMDFYTSGQPILRE---TEVKTETVYEGEL----GQI 113
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ IK++LD RVRPAVA+DGGDI F + G ++L MRGAC+GCPS+S TL+ GV ++
Sbjct: 114 IAEIKDLLDTRVRPAVAQDGGDIEFDSFDMESGTLYLHMRGACAGCPSSSATLRQGVESL 173
Query: 176 LNHFVPEVKDIRTV 189
+ H+VPEV+ I V
Sbjct: 174 MKHYVPEVRHIEAV 187
>gi|225629714|ref|ZP_03787679.1| NifU domain protein [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225591431|gb|EEH12506.1| NifU domain protein [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 194
Score = 184 bits (468), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 131/191 (68%), Gaps = 4/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E+TPNP TLKF+PG +L EG FSNA E + S LA+ +F I + V+FG+D
Sbjct: 5 MFIQIEETPNPNTLKFLPGFAILNEGETADFSNADEIKNSKLAANLFQIEHVVRVFFGHD 64
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K +W+ L+ +L IM+HF SG + G+ D + D F E+D +V
Sbjct: 65 FISVTKLGGINWDTLKVEILTTIMDHFTSGGKALDKEGVNDNNISD--EEFFDENDIEIV 122
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
RIKE++++ ++PAVA+DGGDI F+GY+DGIV++ ++GACSGCPSA+ TLK GV N+L++
Sbjct: 123 NRIKELMESYIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLSY 182
Query: 179 FVPEVKDIRTV 189
+PEV I T
Sbjct: 183 HIPEVAGIETT 193
>gi|307108001|gb|EFN56242.1| hypothetical protein CHLNCDRAFT_48753 [Chlorella variabilis]
Length = 209
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 129/192 (67%), Gaps = 12/192 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNPA+L FIPGQ VL G+ F++A+EA SPLA ++F+I G+ V+FG DF
Sbjct: 1 MFIQTQPTPNPASLMFIPGQKVLEGGSKSFTSAREAMASPLAKKLFAIDGVTQVFFGSDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI--ESDSAV 117
+TV K + Y W L+P V IM+H+ SG+ + ++ D G+ + + E D V
Sbjct: 61 VTVTKSEDYGWAVLKPDVFAAIMDHYSSGEALFYDE-------QDTGAAEHMIHEDDDEV 113
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE+L+ R+RPAV DGGDIVF+ + G+V L M GACSGCPS++ TLK G+ N+
Sbjct: 114 VAMIKELLETRIRPAVQEDGGDIVFRTWDPESGVVKLKMMGACSGCPSSAVTLKSGIENM 173
Query: 176 LNHFVPEVKDIR 187
L H++PEV+ +
Sbjct: 174 LMHYIPEVRGVE 185
>gi|326386713|ref|ZP_08208334.1| nitrogen-fixing NifU-like protein [Novosphingobium nitrogenifigens
DSM 19370]
gi|326208766|gb|EGD59562.1| nitrogen-fixing NifU-like protein [Novosphingobium nitrogenifigens
DSM 19370]
Length = 191
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 132/190 (69%), Gaps = 4/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+TE TPNPATLKF+PG++V+ +G F++A+EA ISPLA +FS+ + V FG +F
Sbjct: 1 MFIETETTPNPATLKFLPGEIVMADGTREFTSAEEAAISPLADALFSLGDVTGVLFGREF 60
Query: 61 ITVG-KDQYDWEHLRPPVLGMIMEHFISGDPII--HNGGLGDMKLDDMGSGDFIESDSAV 117
++V W +P VL ++++HF+S P+ + G +D GD +D+ +
Sbjct: 61 VSVTIAPGSAWSDTKPQVLAVLLDHFVSQAPLFVAASAGFSVPAEEDEDFGD-DPADADI 119
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +I ++++ R+RPAVA DGGDI ++G+RDG+V+L M+GACSGCPS+S TLK G+ +L
Sbjct: 120 VDQILDLIETRIRPAVANDGGDISYRGFRDGVVYLRMQGACSGCPSSSATLKNGIEALLK 179
Query: 178 HFVPEVKDIR 187
H+VPEV ++R
Sbjct: 180 HYVPEVNEVR 189
>gi|255088633|ref|XP_002506239.1| predicted protein [Micromonas sp. RCC299]
gi|226521510|gb|ACO67497.1| predicted protein [Micromonas sp. RCC299]
Length = 298
Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 131/188 (69%), Gaps = 9/188 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAI-HFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT+ TPNPA+L F+PG+ V EG +F+N +E SPLA ++F I G+ SV+FG D
Sbjct: 94 IFIQTQTTPNPASLMFMPGKPVYEEGGTKNFANPREGMASPLAKKLFLIDGVTSVFFGQD 153
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+TV K ++++W L+P V IM+++ SG+PII + + +L + G+ E D +V
Sbjct: 154 FVTVTKSEEHEWGTLKPEVFAAIMDYYASGEPIITD----EAELANAGTA-ITEDDDEIV 208
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+L+ R+RPAVA DGGDIVFKG+ G+V + M+GAC GCPS+S TLK G+ N+L
Sbjct: 209 AMIKELLETRIRPAVAEDGGDIVFKGWNADTGVVTVKMQGACDGCPSSSVTLKSGIENML 268
Query: 177 NHFVPEVK 184
H+VPEV
Sbjct: 269 RHYVPEVN 276
>gi|83944990|ref|ZP_00957356.1| nifU domain protein [Oceanicaulis alexandrii HTCC2633]
gi|83851772|gb|EAP89627.1| nifU domain protein [Oceanicaulis alexandrii HTCC2633]
Length = 186
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 125/192 (65%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTEDTPNP TLKF+PGQ V ++ F+ +EAE S LA +F + G+ V+ G DF
Sbjct: 1 MFIQTEDTPNPDTLKFLPGQSVSLDAPRDFATPEEAESSYLARELFRVEGVIRVFAGQDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I+V K + DW H++P VLG IM+ SG + + DD G + + +V+
Sbjct: 61 ISVTKAEGVDWPHIKPAVLGAIMDCLESGKSLFSDA-------DDDGHAAYEGEAAGIVK 113
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILN 177
IK+V+D RVRPAVARDGGDIVF Y + G+V L MRGAC+GCPS++ TLK G+ N+L
Sbjct: 114 EIKDVIDTRVRPAVARDGGDIVFHSYDEATGVVNLHMRGACAGCPSSTMTLKQGIENLLK 173
Query: 178 HFVPEVKDIRTV 189
H+VPEV + V
Sbjct: 174 HYVPEVSSVEAV 185
>gi|308802059|ref|XP_003078343.1| NifU-like domain-containing proteins (ISS) [Ostreococcus tauri]
gi|116056795|emb|CAL53084.1| NifU-like domain-containing proteins (ISS) [Ostreococcus tauri]
Length = 244
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/191 (48%), Positives = 127/191 (66%), Gaps = 11/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MF+QT+ TPNP +L F PG+ V EG+ +F +A+EA +SPLA R+F+I G+ +V+ G DF
Sbjct: 40 MFVQTQATPNPESLMFQPGRDVYAEGSRNFGSAREAMVSPLARRLFAIDGVTNVFLGVDF 99
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES-DSAVV 118
ITV KD +DWE ++P IM+ + SG+ ++ L G G IE D VV
Sbjct: 100 ITVTKDADHDWETVKPRTFEAIMDFYASGEAVVDEASL-------EGHGTAIEEDDDEVV 152
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+L+ R+RPAVA DGGDIVFK Y G+V + + GAC GCPS+S TLK G+ N+L
Sbjct: 153 AMIKELLETRIRPAVAEDGGDIVFKAYDQETGVVSVQLMGACDGCPSSSVTLKSGIENML 212
Query: 177 NHFVPEVKDIR 187
H+VPEVK ++
Sbjct: 213 MHYVPEVKGVQ 223
>gi|162147187|ref|YP_001601648.1| nitrogen fixation protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209544240|ref|YP_002276469.1| Scaffold protein Nfu/NifU [Gluconacetobacter diazotrophicus PAl 5]
gi|161785764|emb|CAP55335.1| putative nitrogen fixation protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|209531917|gb|ACI51854.1| Scaffold protein Nfu/NifU [Gluconacetobacter diazotrophicus PAl 5]
Length = 187
Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 128/192 (66%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH--FSNAKEAEISPLASRIFSIPGIASVYFGY 58
MFI+TEDTPNPATLKF+PG+ ++ A S A S LA +F PG+A V+ G
Sbjct: 1 MFIETEDTPNPATLKFLPGRTIVPGRATADFVSPDAVAGRSKLADALFGQPGVARVFLGG 60
Query: 59 DFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
DF+ V KD+ DW L+P +L ++++ F+SG P I + + +L D +
Sbjct: 61 DFVAVTKDEATDWSVLKPQLLSVLVDFFVSGMPAIEDDAAVEEEL-------IAPEDEEI 113
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V++IKE+LD RVRPAVA DGGDIVF+GYRDG+V L+M+GACSGCPS+ TLK+GV N+L
Sbjct: 114 VRQIKELLDTRVRPAVAGDGGDIVFRGYRDGVVRLTMQGACSGCPSSRATLKHGVENMLR 173
Query: 178 HFVPEVKDIRTV 189
H+VPEV + V
Sbjct: 174 HYVPEVVSVEQV 185
>gi|182678037|ref|YP_001832183.1| scaffold protein Nfu/NifU [Beijerinckia indica subsp. indica ATCC
9039]
gi|182633920|gb|ACB94694.1| Scaffold protein Nfu/NifU [Beijerinckia indica subsp. indica ATCC
9039]
Length = 187
Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 139/189 (73%), Gaps = 2/189 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ V+ G + A A+ SPLA +F++ G++ V+FG DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRPVMRLGTLDIREADGAKKSPLAEALFALEGVSGVFFGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
I+V + Q DW+ ++P VLG IMEH++SG P++ + D++ + G + E+D+ V
Sbjct: 61 ISVTRQQGDWQDIKPAVLGAIMEHYLSGAPLLTDE--ADLQPQNDGEEFYAEADAHTVAT 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IK+++++ VRPAVA+DGGDI F+G+R+G V+L+M+G+CSGCPS+S TL++GV N+L H+V
Sbjct: 119 IKQLIESHVRPAVAKDGGDIKFRGFREGTVYLAMKGSCSGCPSSSATLRHGVQNLLKHYV 178
Query: 181 PEVKDIRTV 189
PEV + +
Sbjct: 179 PEVVSVEQI 187
>gi|114571567|ref|YP_758247.1| NifU domain-containing protein [Maricaulis maris MCS10]
gi|114342029|gb|ABI67309.1| nitrogen-fixing NifU domain protein [Maricaulis maris MCS10]
Length = 187
Score = 181 bits (460), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 131/192 (68%), Gaps = 9/192 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP TLKF+PG+ + +G F + ++A +PLA+ +F + G++ V+FG DF
Sbjct: 1 MFIQTEATPNPNTLKFLPGREIAPDGPREFESEEDAASAPLAADLFLVDGVSGVFFGEDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I + K D Y+W+H++P +LG IM+ SG P++ + + ++ G ++ + +V+
Sbjct: 61 IAITKTDAYEWDHIKPFLLGTIMDGLQSGRPLVGS------ETNETGHANYAGENEGLVK 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
I E++D RVRPAVA+DGGDI+F Y GIV L MRGACSGCPS++ TLK G+ N+L
Sbjct: 115 EIIELIDTRVRPAVAQDGGDILFHSYLADSGIVRLKMRGACSGCPSSTMTLKSGIENLLK 174
Query: 178 HFVPEVKDIRTV 189
H++PE++ + V
Sbjct: 175 HYIPEIQSVEAV 186
>gi|58699011|ref|ZP_00373859.1| NifU domain protein [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225630807|ref|YP_002727598.1| NifU domain protein [Wolbachia sp. wRi]
gi|58534475|gb|EAL58626.1| NifU domain protein [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225592788|gb|ACN95807.1| NifU domain protein [Wolbachia sp. wRi]
Length = 194
Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 131/191 (68%), Gaps = 4/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E+TPNP TLKF+PG +L EG FSNA E + S LA+ +F I + V+FG+D
Sbjct: 5 MFIQIEETPNPNTLKFLPGFEILNEGETTDFSNANEIKNSKLAANLFQIEHVVRVFFGHD 64
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K +W+ L+ +L IM+HF SG + G+ D + D F ++D +V
Sbjct: 65 FISVTKLGGINWDTLKVEILTTIMDHFTSGGKALDKEGVNDNNIPD--EEFFDKNDIEIV 122
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
RIKE++++ ++PAVA+DGGDI F+GY+DGIV++ ++GACSGCPSA+ TLK GV N+L++
Sbjct: 123 NRIKELMESYIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLSY 182
Query: 179 FVPEVKDIRTV 189
+PE+ I T
Sbjct: 183 HIPEIAGIETT 193
>gi|58697437|ref|ZP_00372735.1| NifU domain protein [Wolbachia endosymbiont of Drosophila simulans]
gi|58536136|gb|EAL59746.1| NifU domain protein [Wolbachia endosymbiont of Drosophila simulans]
Length = 190
Score = 181 bits (459), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 131/191 (68%), Gaps = 4/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E+TPNP TLKF+PG +L EG FSNA E + S LA+ +F I + V+FG+D
Sbjct: 1 MFIQIEETPNPNTLKFLPGFEILNEGETTDFSNANEIKNSKLAANLFQIEHVVRVFFGHD 60
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K +W+ L+ +L IM+HF SG + G+ D + D F ++D +V
Sbjct: 61 FISVTKLGGINWDTLKVEILTTIMDHFTSGGKALDKEGVNDNNIPD--EEFFDKNDIEIV 118
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
RIKE++++ ++PAVA+DGGDI F+GY+DGIV++ ++GACSGCPSA+ TLK GV N+L++
Sbjct: 119 NRIKELMESYIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLSY 178
Query: 179 FVPEVKDIRTV 189
+PE+ I T
Sbjct: 179 HIPEIAGIETT 189
>gi|85374519|ref|YP_458581.1| hypothetical protein ELI_08460 [Erythrobacter litoralis HTCC2594]
gi|84787602|gb|ABC63784.1| hypothetical protein ELI_08460 [Erythrobacter litoralis HTCC2594]
Length = 192
Score = 180 bits (457), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 132/194 (68%), Gaps = 11/194 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+TE TPNP+TLKF+PGQ V+ G F++ +EAE SPLA IF + +V+FG DF
Sbjct: 1 MFIETETTPNPSTLKFLPGQQVMPGGTREFTSPEEAEASPLAQAIFDTGEVTNVFFGSDF 60
Query: 61 ITV-GKDQYDWEHLRPPVLGMIMEHFISGDPIIHNG---GLGDMKLDDMGSGDFIES--- 113
++V DW L+ V+ ++++HF+S P+ G G+ DD+ +E
Sbjct: 61 VSVSAAPGADWSSLKGMVVSILLDHFVSQAPLFVGGDASGISVPAEDDL----LVEENAD 116
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
D+ +V +I E+L+ RVRPAVA DGGDI ++G++DG+V+L+++GACSGCPS++ TLK G+
Sbjct: 117 DADIVAQINELLETRVRPAVAGDGGDIAYRGFKDGVVYLTLQGACSGCPSSTATLKQGIE 176
Query: 174 NILNHFVPEVKDIR 187
+L H+VPEV ++R
Sbjct: 177 GLLKHYVPEVVEVR 190
>gi|42520881|ref|NP_966796.1| NifU domain-containing protein [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410621|gb|AAS14730.1| NifU domain protein [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 191
Score = 180 bits (456), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 130/191 (68%), Gaps = 7/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAI-HFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E+TPNP TLKF+PG +L EG FSNA E + S LA+ +F I + V+FG+D
Sbjct: 5 MFIQIEETPNPNTLKFLPGFEILNEGETADFSNANEIKNSKLAANLFQIEHVVRVFFGHD 64
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K D +W+ L+ VL IM HF SG L +++D F ++D +V
Sbjct: 65 FISVTKLDGINWDILKVEVLTTIMNHFTSGGK-----ALDKEEVNDPDEEFFDKNDIEIV 119
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
RIKE++++ ++PAVA+DGGDI F+GY+DGIV++ ++GACSGCPSA+ TLK GV N+L++
Sbjct: 120 NRIKELMESHIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLSY 179
Query: 179 FVPEVKDIRTV 189
+PE+ I T
Sbjct: 180 HIPEIAGIETT 190
>gi|85709112|ref|ZP_01040178.1| possible NifU-like domain protein [Erythrobacter sp. NAP1]
gi|85690646|gb|EAQ30649.1| possible NifU-like domain protein [Erythrobacter sp. NAP1]
Length = 193
Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 131/197 (66%), Gaps = 16/197 (8%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+TE TPNP++LKF+PG+ V+ G F++ + AE SPLA IF + +V++G+DF
Sbjct: 1 MFIETETTPNPSSLKFLPGRAVMPSGTREFASPEAAEASPLAQAIFDTGEVVNVFYGWDF 60
Query: 61 ITV-GKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGL---------GDMKLDDMGSGDF 110
+TV DW L+P V ++++HF+S P+ G +M ++D
Sbjct: 61 VTVTAAPGVDWSALKPQVHAILLDHFVSEAPLFVGGTADGISVPPEEAEMVVEDR----- 115
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
E D+ ++ I E+L+ RVRPAVA DGGDI ++G+ DG+V+L+++GAC+GCPS++ TLK+
Sbjct: 116 -EEDAEIIASINELLETRVRPAVAGDGGDIAYRGFSDGVVYLTLQGACAGCPSSTATLKH 174
Query: 171 GVANILNHFVPEVKDIR 187
G+ ++L H+VPEV ++R
Sbjct: 175 GIESLLKHYVPEVVEVR 191
>gi|307293136|ref|ZP_07572982.1| Scaffold protein Nfu/NifU [Sphingobium chlorophenolicum L-1]
gi|306881202|gb|EFN12418.1| Scaffold protein Nfu/NifU [Sphingobium chlorophenolicum L-1]
Length = 190
Score = 179 bits (454), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M I+TE TPNPAT+KF+PG+VV+ G F+ +EAE SPLA +F + + V+FG DF
Sbjct: 1 MLIETEATPNPATVKFLPGRVVMGMGTRDFATPEEAEASPLADALFGLGDVTGVFFGGDF 60
Query: 61 ITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I+V W ++P +L +++EHF P+ G GD+ + + D+ +V
Sbjct: 61 ISVTIAPGAQWSDVKPDILSILLEHFSVNMPLFAPGSAGDIFVPEEEEFADDPEDAEIVS 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+I+E++D RVRPAVA DGGDIV++G+ G V+L M+GACSGCPS++ TLK G+ +L H+
Sbjct: 121 QIRELIDTRVRPAVANDGGDIVYRGFDKGTVYLRMQGACSGCPSSTATLKNGIEQLLKHY 180
Query: 180 VPEVKDIRTV 189
VPEV ++R V
Sbjct: 181 VPEVTEVRAV 190
>gi|159465189|ref|XP_001690805.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
gi|158279491|gb|EDP05251.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
Length = 319
Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 127/191 (66%), Gaps = 12/191 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F+PG+ V+ G + F +A+E SPLA ++F++ GI SV+FG DF
Sbjct: 84 MFIQTQPTPNPNSLMFVPGKPVMQSGTMEFGSAREGMKSPLAKKLFAVDGITSVFFGSDF 143
Query: 61 ITV-GKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI--ESDSAV 117
+T+ KD+Y W L+P V IME + SG+ +I + D + + D DS V
Sbjct: 144 VTITKKDEYSWPVLKPDVFAAIMEFYASGEALISDA-------DALAASDTAIHPDDSEV 196
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE+L+ R+RPAV DGGDIVFKG+ + G+V + + GACS CPS++ TLK G+ N+
Sbjct: 197 VAMIKELLETRIRPAVQEDGGDIVFKGFEEDTGMVQVKLVGACSTCPSSTVTLKNGIENM 256
Query: 176 LNHFVPEVKDI 186
L H++PEVK +
Sbjct: 257 LMHYIPEVKGV 267
>gi|58584670|ref|YP_198243.1| NifU family protein [Wolbachia endosymbiont strain TRS of Brugia
malayi]
gi|58418986|gb|AAW71001.1| NifU family protein containing thioredoxin-like domain [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 190
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 128/191 (67%), Gaps = 4/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE-GAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E+TPNP TLKF+PG +L E FSN E + S LA+ +F I + V+FG+D
Sbjct: 1 MFIQIEETPNPNTLKFLPGFAILNERETADFSNPDEIKNSKLAADLFQIEHVIRVFFGHD 60
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K D W+ L+ +L +M+HF SG + G+ D + D F E+D +V
Sbjct: 61 FISVTKSDGISWDILKVEILTTVMDHFTSGGKALDRKGVNDNNIPD--EEFFDENDIEIV 118
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
RIKE+++N ++PAVA+DGGDI F+GY+DGIV++ ++GACSGCPSA+ TLK GV N+L +
Sbjct: 119 NRIKELMENYIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLCY 178
Query: 179 FVPEVKDIRTV 189
+PEV I T
Sbjct: 179 HIPEVSGIETT 189
>gi|294012036|ref|YP_003545496.1| nitrogen-fixing NifU-like protein [Sphingobium japonicum UT26S]
gi|292675366|dbj|BAI96884.1| nitrogen-fixing NifU-like protein [Sphingobium japonicum UT26S]
Length = 190
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 125/190 (65%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M I+TE TPNPAT+KFIPG+VV+ G F+ +EAE SPLA +F + + V+FG DF
Sbjct: 1 MLIETEATPNPATVKFIPGRVVMGMGTRDFATPEEAEASPLADALFGLGDVTGVFFGGDF 60
Query: 61 ITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I+V W ++P +L +++EHF + P+ G G++ + D +V
Sbjct: 61 ISVTIAPGAQWSDVKPDILSILLEHFSANMPLFRPGSAGEIFVPQEEEFADDPEDEEIVA 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+I+E++D RVRPAVA DGGDI+++G+ G V+L M+GACSGCPS++ TLK G+ +L H+
Sbjct: 121 QIRELIDTRVRPAVANDGGDIIYRGFDKGTVYLRMQGACSGCPSSTATLKNGIEQLLKHY 180
Query: 180 VPEVKDIRTV 189
VPEV ++R V
Sbjct: 181 VPEVTEVRAV 190
>gi|145344446|ref|XP_001416743.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576969|gb|ABO95036.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 206
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 125/190 (65%), Gaps = 11/190 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F PG+ V EG+ +FSNA+EA SPLA R+F+I G+ +V+FG DF
Sbjct: 1 MFIQTQTTPNPMSLMFQPGREVYAEGSKNFSNAREAMASPLAKRLFAIEGVTNVFFGIDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI-ESDSAVV 118
+TV K + +WE ++P I + SG+ ++ L SG I E D +V
Sbjct: 61 VTVTKGEDAEWETVKPQTFEAITNFYASGETVMDEEKLA-------ASGTAIAEDDDEIV 113
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+L+ R+RPAVA DGGDIVFK + G+V + ++G+C GCPS+S TLK G+ N+L
Sbjct: 114 AMIKELLETRIRPAVAEDGGDIVFKAFDPESGLVTVQLQGSCDGCPSSSVTLKSGIENML 173
Query: 177 NHFVPEVKDI 186
H+VPEVK +
Sbjct: 174 MHYVPEVKGV 183
>gi|329891163|ref|ZP_08269506.1| scaffold protein Nfu/NifU family protein [Brevundimonas diminuta
ATCC 11568]
gi|328846464|gb|EGF96028.1| scaffold protein Nfu/NifU family protein [Brevundimonas diminuta
ATCC 11568]
Length = 185
Score = 178 bits (451), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 126/193 (65%), Gaps = 13/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF+PG+ V V+ + + EA SPLA +F + G+ V+FG D+
Sbjct: 1 MFIQTEATPNPNALKFLPGRDVAVQDVLEYRTIDEAAASPLAEALFELEGVEGVFFGADY 60
Query: 61 ITVGKDQY--DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+++ + + DW ++ P+L +IM+HF+SG P++ G+ +D G D+ +V
Sbjct: 61 VSITRAAHGPDWTEMKAPILSVIMDHFVSGAPLVRE---GETATEDAG------EDTEIV 111
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IK +LD+R+RPAVA+DGGDI+F + + G++ L MRGAC+GCPS+S TLK GV ++
Sbjct: 112 AEIKSLLDSRIRPAVAQDGGDILFDHFDEETGVLRLRMRGACAGCPSSSATLKAGVEQMM 171
Query: 177 NHFVPEVKDIRTV 189
H+VPEV + V
Sbjct: 172 RHYVPEVTSVEQV 184
>gi|197128017|gb|ACH44515.1| putative iron-sulfur cluster scaffold protein Nfu variant 3
[Taeniopygia guttata]
Length = 252
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 121/189 (64%), Gaps = 9/189 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + FS A SPLA ++F I G+ SV+FG DF
Sbjct: 55 MFIQTQDTPNPNSLKFIPGRAVLESRTMEFSTPAAAYCSPLARQLFRIEGVKSVFFGPDF 114
Query: 61 ITVGKDQ--YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K+ DW L+P + IM+ F SG P++ + + D S E D VV
Sbjct: 115 ITITKESEDLDWNLLKPDIYATIMDFFASGLPVVTDEA---SRTDTAAS----EEDDEVV 167
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 168 LMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVLLKLQGSCTSCPSSLITLKSGIQNMLQF 227
Query: 179 FVPEVKDIR 187
++PEV+ +
Sbjct: 228 YIPEVEGVE 236
>gi|321470871|gb|EFX81846.1| hypothetical protein DAPPUDRAFT_49825 [Daphnia pulex]
Length = 206
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 126/192 (65%), Gaps = 11/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPG-QVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MF+QT+DTPNP +LKF+PG QVVL + F A+ SPLA +F I G+ SV+ G D
Sbjct: 1 MFVQTQDTPNPNSLKFLPGVQVVLESETMDFPTLSSAQCSPLAKLLFRIEGVKSVFLGPD 60
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FIT+ K ++ DW+ ++ V IM+ F SG P+++ G + D G+ E D+
Sbjct: 61 FITITKIDEETDWKTIKAEVFATIMDFFTSGLPVVNEG----INQPDNGN----EEDNDT 112
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD+R+RP V DGGD+VFKG++DGIV+L ++G+C+ CPS+ TLK GV N+L
Sbjct: 113 VLMIKELLDSRIRPTVQEDGGDLVFKGFKDGIVYLKLQGSCTSCPSSMVTLKNGVQNMLQ 172
Query: 178 HFVPEVKDIRTV 189
++PEV + V
Sbjct: 173 FYIPEVIAVEQV 184
>gi|194763845|ref|XP_001964043.1| GF20932 [Drosophila ananassae]
gi|263505256|sp|B3MRT7|NFU1_DROAN RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|190618968|gb|EDV34492.1| GF20932 [Drosophila ananassae]
Length = 286
Score = 177 bits (450), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 121/191 (63%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G H F + A SPLA +F + G+ +V+FG D
Sbjct: 67 MFIQTQDTPNPESLKFLPGVEVLGKGNTHDFPSGTTAHGSPLAKLLFRVEGVRAVFFGAD 126
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K++ +W ++P V +IM+ F SG PI+H + +E D V
Sbjct: 127 FITISKEEGAEWSLIKPEVFAVIMDFFASGLPILHESTPN-------ADTEILEDDDETV 179
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF GY +GIV L M+G+CS CPS+ TLK GV N+L
Sbjct: 180 MMIKELLDTRIRPTVQEDGGDIVFMGYENGIVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 239
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 240 YIPEVESVEQV 250
>gi|224080725|ref|XP_002196481.1| PREDICTED: putative iron-sulfur cluster scaffold protein Nfu
variant 3 [Taeniopygia guttata]
Length = 252
Score = 177 bits (450), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 121/188 (64%), Gaps = 9/188 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + FS A SPLA ++F I G+ SV+FG DF
Sbjct: 55 MFIQTQDTPNPNSLKFIPGRAVLESRTMEFSTPAAAYCSPLARQLFRIEGVKSVFFGPDF 114
Query: 61 ITVGKDQ--YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K+ DW L+P + IM+ F SG P++ + + D S E D VV
Sbjct: 115 ITITKESEDLDWNLLKPDIYATIMDFFASGLPVVTDEA---PRTDTAAS----EEDDEVV 167
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 168 LMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVLLKLQGSCTSCPSSLITLKSGIQNMLQF 227
Query: 179 FVPEVKDI 186
++PEV+ +
Sbjct: 228 YIPEVEGV 235
>gi|302832552|ref|XP_002947840.1| hypothetical protein VOLCADRAFT_88148 [Volvox carteri f.
nagariensis]
gi|300266642|gb|EFJ50828.1| hypothetical protein VOLCADRAFT_88148 [Volvox carteri f.
nagariensis]
Length = 314
Score = 177 bits (449), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 127/191 (66%), Gaps = 12/191 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F+PG+ V+ G + FS+A+E SPLA ++F+I GI SV+FG DF
Sbjct: 82 MFIQTQPTPNPNSLMFVPGKPVMESGTLEFSSAREGMKSPLAKKLFAIDGITSVFFGSDF 141
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI--ESDSAV 117
+TV K D + W L+P + IM+ + SG+P++ + + S D DS V
Sbjct: 142 VTVTKRDDFTWPVLKPDIFAAIMDFYSSGEPLVSDAAA-------LASSDTAIHPDDSEV 194
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE+L+ R+RPAV DGGDIV+KG+ + G+V + + GACS CPS++ TLK G+ N+
Sbjct: 195 VAMIKELLETRIRPAVQEDGGDIVYKGFEEDTGMVMVKLVGACSTCPSSTVTLKNGIENM 254
Query: 176 LNHFVPEVKDI 186
L H++PEVK +
Sbjct: 255 LMHYIPEVKGV 265
>gi|241156886|ref|XP_002407882.1| conserved hypothetical protein [Ixodes scapularis]
gi|215494245|gb|EEC03886.1| conserved hypothetical protein [Ixodes scapularis]
Length = 260
Score = 177 bits (449), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 123/191 (64%), Gaps = 6/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT++TPNP LKF+P VL +G F A+ SPLA +F + G+ +V+FG DF
Sbjct: 48 MFIQTQETPNPNCLKFLPNVKVLEQGTRDFPTLASAKDSPLAKHLFRVEGVKAVFFGSDF 107
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K D+ +W+ L+P + IM+ F +G P+++ G + D E DS V
Sbjct: 108 ITVTKADDETEWQVLKPHLYAAIMDFFTTGLPVVNEDGTEPVAEDTRPK----EDDSETV 163
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+++ R+RP V DGGDIV+ G+ DG+V L ++G+C+GCPS+S TLK G+ N+L
Sbjct: 164 LMIKELIETRIRPTVQEDGGDIVYMGFEDGVVKLKLQGSCTGCPSSSVTLKAGIQNMLQF 223
Query: 179 FVPEVKDIRTV 189
+VPEVKD+ V
Sbjct: 224 YVPEVKDVEQV 234
>gi|296114423|ref|ZP_06833077.1| Scaffold protein Nfu/NifU [Gluconacetobacter hansenii ATCC 23769]
gi|295979184|gb|EFG85908.1| Scaffold protein Nfu/NifU [Gluconacetobacter hansenii ATCC 23769]
Length = 187
Score = 177 bits (448), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 131/193 (67%), Gaps = 12/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAI-HFSNAKE-AEISPLASRIFSIPGIASVYFGY 58
MFI+TEDTPNPATLKF+PG+ ++ GA F +A A S LA +F + G++ V+FG
Sbjct: 1 MFIETEDTPNPATLKFLPGRELMPNGATADFIDADSVAGRSRLAEVLFDLEGVSRVFFGG 60
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGD-PIIHNGGLGDMKLDDMGSGDFIESDSA 116
DF+ V K D W+ L+P VL ++ ++ +G P+ H + + D + GD
Sbjct: 61 DFVAVTKADTVAWDELKPQVLSVVADYLATGQAPVEHEAVVIE---DAIAPGD-----EE 112
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+V++IKE+LD RVRPAVA DGGDIVF+GYRDGIV L+M+GACSGCPS+ TLK+GV N+L
Sbjct: 113 IVKQIKELLDTRVRPAVAGDGGDIVFRGYRDGIVRLTMQGACSGCPSSRATLKHGVENML 172
Query: 177 NHFVPEVKDIRTV 189
H+VPEV + V
Sbjct: 173 RHYVPEVVSVEQV 185
>gi|87199010|ref|YP_496267.1| nitrogen-fixing NifU-like [Novosphingobium aromaticivorans DSM
12444]
gi|87134691|gb|ABD25433.1| nitrogen-fixing NifU-like protein [Novosphingobium aromaticivorans
DSM 12444]
Length = 195
Score = 176 bits (447), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 128/190 (67%), Gaps = 3/190 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+TE TPNPATLKF+PG+ V+ G F + +EAE SPLA +F + + V FG DF
Sbjct: 4 MFIETETTPNPATLKFLPGEQVMASGTREFVSHEEAEASPLAQALFDLGDVTGVLFGRDF 63
Query: 61 ITV-GKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
++V W L+P VL ++++HF++ P+ G G + + DF + +
Sbjct: 64 VSVTAAPGVAWADLKPQVLSLLLDHFVAQAPLFAPGSAGGIVVPADADEDFADDPADADI 123
Query: 120 --RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+IK++++ RVRPAVA DGGDI+++G+R+G+V+L M+GACSGCPS++ TLK G+ ++L
Sbjct: 124 IDQIKDLIETRVRPAVANDGGDIIYRGFREGVVYLKMQGACSGCPSSTATLKNGIESLLK 183
Query: 178 HFVPEVKDIR 187
H+VPEV ++R
Sbjct: 184 HYVPEVSEVR 193
>gi|58039243|ref|YP_191207.1| NifU protein [Gluconobacter oxydans 621H]
gi|58001657|gb|AAW60551.1| NifU protein [Gluconobacter oxydans 621H]
Length = 212
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 123/192 (64%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA-IHFSNAK-EAEISPLASRIFSIPGIASVYFGY 58
MFI+TEDTPNPATLKF+PG+ V + + F +A A S LAS +F P + V+ G
Sbjct: 26 MFIETEDTPNPATLKFLPGRSVTGDARPVDFGDADVAAGRSELASALFDQPNVRRVFLGG 85
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
DF++V K D W L+P VLG I F SG P++ D D+ V
Sbjct: 86 DFVSVTKSDDISWGDLKPVVLGTITTFFESGRPVLSGTQAAPEH-------DVSPEDAEV 138
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V RI+++LD RVRPAVA DGGDI F+GY+DG+V+L+M+GACSGCPS+ TLK+GV N+L
Sbjct: 139 VSRIQDLLDTRVRPAVAGDGGDIAFRGYKDGVVYLAMQGACSGCPSSRATLKHGVENMLR 198
Query: 178 HFVPEVKDIRTV 189
H+VPEV + V
Sbjct: 199 HYVPEVASVEQV 210
>gi|332188730|ref|ZP_08390443.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. S17]
gi|332011236|gb|EGI53328.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. S17]
Length = 190
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 129/191 (67%), Gaps = 3/191 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M I+TE TPNPATLKF+PG+ V+ G F++ +EA SPLA IF++ + V+FG DF
Sbjct: 1 MLIETEPTPNPATLKFLPGRKVMDSGTRDFASPEEAAASPLAEAIFNLGDVTGVFFGRDF 60
Query: 61 ITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLG-DMKLDDMGSGDFIESDSAVV 118
++V DW ++P VLG++++HF + P+ G + ++ D E D+ +V
Sbjct: 61 VSVTIAPGVDWSDVKPDVLGILLDHFSAQMPLFKQGAADFAVPAEEETFADNPE-DADIV 119
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+I+E++D RVRPAVA DGGDIV++G+ G V+L M+GAC+GCPS++ TLK G+ +L H
Sbjct: 120 AQIRELIDTRVRPAVANDGGDIVYRGFDKGKVYLKMQGACAGCPSSTATLKNGIEQLLRH 179
Query: 179 FVPEVKDIRTV 189
+VPEV ++R V
Sbjct: 180 YVPEVTEVRAV 190
>gi|91089707|ref|XP_974909.1| PREDICTED: similar to AGAP000598-PA [Tribolium castaneum]
gi|270011317|gb|EFA07765.1| hypothetical protein TcasGA2_TC005319 [Tribolium castaneum]
Length = 244
Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 125/193 (64%), Gaps = 12/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT++TPNP +LKF+PG VL EG I F N + A SPL +F I G+ SV+ G +
Sbjct: 49 MFIQTQETPNPNSLKFLPGVKVLEEGQTIDFPNGQAAYCSPLGKLLFRIEGVKSVFLGPE 108
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGL-GDMKLDDMGSGDFIESDSA 116
FITV K D+ +W+ ++P + IM+ F SG P++++ D +++ E DS
Sbjct: 109 FITVTKTDDEIEWKIIKPEIFATIMDFFASGLPVLNDATPNADTQIN--------EDDSE 160
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+VQ IKE+LD R+RP V DGGDI+F GY DGIV L ++GAC+ CPS+ TLK GV N+L
Sbjct: 161 IVQMIKELLDTRIRPTVQEDGGDIIFMGYDDGIVKLKLQGACTSCPSSIVTLKNGVQNML 220
Query: 177 NHFVPEVKDIRTV 189
++PEV + V
Sbjct: 221 QFYIPEVLGVEQV 233
>gi|315497209|ref|YP_004086013.1| scaffold protein nfu/nifu [Asticcacaulis excentricus CB 48]
gi|315415221|gb|ADU11862.1| Scaffold protein Nfu/NifU [Asticcacaulis excentricus CB 48]
Length = 188
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 127/194 (65%), Gaps = 12/194 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKFIPG+ VL +G++ F +AE SPLA +F I G++ VYFG DF
Sbjct: 1 MFIQTEATPNPDVLKFIPGREVLGKGSMEFRTETDAEKSPLALSLFQIDGVSGVYFGSDF 60
Query: 61 ITVGKDQYD---WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+TV +D W ++ P+L IM+ + SG I++ G + + + G+ + +
Sbjct: 61 LTVKRDAEAGLIWAQIKAPILAAIMDFYASGRAILNEEGAVNERTYE---GEVAQ----I 113
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANI 175
V IK++LD RVRPAVA+DGGDI F+ + G ++L MRGACSGCPS+S TL+ GV ++
Sbjct: 114 VLEIKDLLDTRVRPAVAQDGGDIEFEHFDIESGTLYLHMRGACSGCPSSSATLRQGVESL 173
Query: 176 LNHFVPEVKDIRTV 189
+ H+VPEVK I V
Sbjct: 174 MKHYVPEVKTIEQV 187
>gi|224097626|ref|XP_002311017.1| predicted protein [Populus trichocarpa]
gi|222850837|gb|EEE88384.1| predicted protein [Populus trichocarpa]
Length = 198
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 121/190 (63%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F PG+ ++ G+ F NA+ A SPLA I+ I GI V+FG DF
Sbjct: 4 MFIQTQSTPNPLSLMFHPGKPIMDVGSADFPNARSAMNSPLAKSIYEIDGITRVFFGSDF 63
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D WE L P + IM+ + SG+P+ + K + E DS V
Sbjct: 64 VTVTKSDDASWEFLEPEIFAAIMDFYSSGEPLFQDSKTASAKDTAIS-----EDDSETVT 118
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ + G+V L+M+GACSGCPS+S TLK G+ N+L
Sbjct: 119 MIKELLETRIRPAVQDDGGDIEYRGFDEETGVVKLTMQGACSGCPSSSVTLKSGIENMLM 178
Query: 178 HFVPEVKDIR 187
H+VPEVK +
Sbjct: 179 HYVPEVKGVE 188
>gi|312384995|gb|EFR29592.1| hypothetical protein AND_01304 [Anopheles darlingi]
Length = 214
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 118/191 (61%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL G + F N A+ SPLA +F I G+ SV+FG D
Sbjct: 1 MFIQTQDTPNPHSLKFLPGVTVLDAGQTMDFPNVSSAQCSPLAKLLFRIEGVRSVFFGAD 60
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+T+ K + +W ++P +IM+ F SG P++ + S E D V
Sbjct: 61 FVTISKVEDAEWSIIKPETFAVIMDFFASGLPVVTGANPNN-------STQINEDDDETV 113
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
Q IKE+LD R+RP V DGGDI+F G+ DG+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 114 QMIKELLDTRIRPTVQEDGGDIIFMGFDDGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 173
Query: 179 FVPEVKDIRTV 189
++PEV + V
Sbjct: 174 YIPEVVSVEQV 184
>gi|291386642|ref|XP_002709869.1| PREDICTED: HIRA interacting protein 5 [Oryctolagus cuniculus]
Length = 255
Score = 174 bits (442), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 123/192 (64%), Gaps = 12/192 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 60 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPASAFRSPLARQLFRIEGVKSVFFGPDF 119
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF-IESDSAV 117
IT+ KD + DW L+P + IM+ F SG P++ ++ SG+ E D V
Sbjct: 120 ITITKDNEELDWNLLKPDIYATIMDFFASGLPLV---------TEETSSGEAGSEEDDEV 170
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 171 VAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ 230
Query: 178 HFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 231 FYIPEVEGVEQV 242
>gi|57529447|ref|NP_001006305.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial [Gallus
gallus]
gi|53136898|emb|CAG32778.1| hypothetical protein RCJMB04_35n21 [Gallus gallus]
Length = 232
Score = 174 bits (441), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 121/189 (64%), Gaps = 9/189 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + FS+ A SPLA ++F I G+ SV+FG DF
Sbjct: 35 MFIQTQDTPNPNSLKFIPGKEVLESRTMEFSSPAAAFCSPLARQLFRIEGVKSVFFGPDF 94
Query: 61 ITVGKDQ--YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K+ DW L+P + IM+ F SG P++ + D S E D VV
Sbjct: 95 ITITKESEDLDWNLLKPDIYATIMDFFASGLPVLTEEA---PRTDTAQS----EEDDEVV 147
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 148 LMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 207
Query: 179 FVPEVKDIR 187
++PEV+ +
Sbjct: 208 YIPEVEGVE 216
>gi|170016007|ref|NP_001116180.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial [Danio
rerio]
gi|169158109|emb|CAQ14737.1| HIRA interacting protein 5 [Danio rerio]
Length = 243
Score = 174 bits (441), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 124/191 (64%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKF+PG+ VL G + F+ ++A SPLA ++F I G+ SV+FG DF
Sbjct: 51 MFIQTQDTPNPNSLKFLPGRAVLDSGTMDFAGPRDAFCSPLARQLFRIDGVKSVFFGPDF 110
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K + +W+ ++P V IM+ F SG P+I+ D D E D VV
Sbjct: 111 ITITKTSGETEWKVIKPDVFATIMDFFTSGLPVINEA---DAPRADTAPS---EDDDEVV 164
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++ G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 165 AMIKELLDTRIRPTVQEDGGDVLYHGFEDGIVKLKLQGSCTSCPSSIITLKNGIQNMLQF 224
Query: 179 FVPEVKDIRTV 189
+VPEV+ + V
Sbjct: 225 YVPEVEGVEQV 235
>gi|195392814|ref|XP_002055049.1| GJ19011 [Drosophila virilis]
gi|263505537|sp|B4M375|NFU1_DROVI RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194149559|gb|EDW65250.1| GJ19011 [Drosophila virilis]
Length = 298
Score = 174 bits (441), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 121/191 (63%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G + F + A SPLA +F + G+ +V+FG D
Sbjct: 75 MFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPSGSAAHCSPLAKLLFRVEGVRAVFFGGD 134
Query: 60 FITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K++ +W ++P V +IM+ F SG P+IH + +E D V
Sbjct: 135 FITISKEESGEWGLIKPEVFAVIMDFFASGLPVIHEARPN-------ADTEILEDDDETV 187
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF GY +GIV L M+G+CS CPS+ TLK GV N+L
Sbjct: 188 MMIKELLDTRIRPTVQEDGGDIVFMGYENGIVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 247
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 248 YIPEVESVEQV 258
>gi|37681825|gb|AAQ97790.1| HIRA interacting protein 5 [Danio rerio]
gi|62205090|gb|AAH92670.1| HIRA interacting protein 5 [Danio rerio]
gi|182891738|gb|AAI65097.1| Hirip5 protein [Danio rerio]
Length = 243
Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 124/191 (64%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKF+PG+ VL G + F+ ++A SPLA ++F I G+ SV+FG DF
Sbjct: 51 MFIQTQDTPNPNSLKFLPGRAVLDSGTMDFAGPRDAFCSPLARQLFRIDGVKSVFFGPDF 110
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K + +W+ ++P V IM+ F SG P+++ D D E D VV
Sbjct: 111 ITITKTSGETEWKVIKPDVFATIMDFFTSGLPVVNEA---DAPRADTAPS---EDDDEVV 164
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++ G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 165 AMIKELLDTRIRPTVQEDGGDVLYHGFEDGIVKLKLQGSCTSCPSSIITLKNGIQNMLQF 224
Query: 179 FVPEVKDIRTV 189
+VPEV+ + V
Sbjct: 225 YVPEVEGVEQV 235
>gi|195447128|ref|XP_002071076.1| GK25604 [Drosophila willistoni]
gi|263505026|sp|B4NE93|NFU1_DROWI RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194167161|gb|EDW82062.1| GK25604 [Drosophila willistoni]
Length = 289
Score = 174 bits (440), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 121/191 (63%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G + F + A SPLA +F + G+ SV+FG D
Sbjct: 68 MFIQTQDTPNPESLKFLPGVEVLGKGNTYDFPSVAAAHCSPLAKLLFRVEGVRSVFFGSD 127
Query: 60 FITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K++ +W ++P V +IM+ F SG PI+H + + +E D V
Sbjct: 128 FITISKEEAAEWGLIKPEVFAVIMDFFASGLPILHEA-------RNNADTEILEDDDETV 180
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF Y +G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 181 MMIKELLDTRIRPTVQEDGGDIVFMSYDNGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 240
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 241 YIPEVESVEQV 251
>gi|170593029|ref|XP_001901267.1| r10h10-like protein TO42 [Brugia malayi]
gi|158591334|gb|EDP29947.1| r10h10-like protein TO42, putative [Brugia malayi]
Length = 220
Score = 174 bits (440), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 127/193 (65%), Gaps = 8/193 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG--AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
MFIQ ++TPNPATLKFIPG++++ +G + F N A+ SPLA +F I GI SV+FG
Sbjct: 1 MFIQVQETPNPATLKFIPGKMIMGKGKGTLDFGNFMSAKKSPLAMELFRINGIKSVFFGE 60
Query: 59 DFITVGKDQY--DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
D++T+ K + DW L+P + ++M++ S PI++ + L + DS
Sbjct: 61 DYVTITKQKEIDDWTLLKPEIFAVLMDYLQSEKPIVNESEM----LKGPEDTEIHPEDSD 116
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V IKE+L+ R++P V DGGD+++KG+ DG+V L M+G+C+GCPS+S TL+ G+ N+L
Sbjct: 117 TVAMIKELLECRIKPMVQEDGGDVIYKGFLDGVVHLKMQGSCTGCPSSSVTLQSGIKNML 176
Query: 177 NHFVPEVKDIRTV 189
+VPEVKD+ V
Sbjct: 177 QFYVPEVKDVMEV 189
>gi|238231487|ref|NP_001154157.1| HIRA-interacting protein 5 [Oncorhynchus mykiss]
gi|225704456|gb|ACO08074.1| HIRA-interacting protein 5 [Oncorhynchus mykiss]
Length = 250
Score = 174 bits (440), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 123/191 (64%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKF+PG++VL +G + F+ +EA SPLA ++F I G+ V+ G DF
Sbjct: 56 MFIQTQDTPNPNSLKFLPGRMVLEQGTMDFTAPREAYCSPLARQLFRIDGVKGVFLGPDF 115
Query: 61 ITVGKDQYD--WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K D W+ ++P V IM+ F SG P+++ D D D D V+
Sbjct: 116 ITITKTDVDLEWKLIKPDVFAAIMDFFTSGLPVVNEE---DTPRADTAPSD---DDDEVI 169
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++ G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 170 AMIKELLDTRIRPTVQEDGGDVLYCGFEDGIVKLKLQGSCTSCPSSMVTLKSGIQNMLQF 229
Query: 179 FVPEVKDIRTV 189
+VPEV+ + V
Sbjct: 230 YVPEVEGVEQV 240
>gi|302381462|ref|YP_003817285.1| Scaffold protein Nfu/NifU [Brevundimonas subvibrioides ATCC 15264]
gi|302192090|gb|ADK99661.1| Scaffold protein Nfu/NifU [Brevundimonas subvibrioides ATCC 15264]
Length = 185
Score = 174 bits (440), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 125/193 (64%), Gaps = 13/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF+PG+ V G+ F + +A SPLA +F + ++ V+FG D
Sbjct: 1 MFIQTEPTPNPNALKFLPGRDVAPGGSREFLSIDQATASPLAEALFQLEDVSGVFFGGDH 60
Query: 61 ITVGKDQY--DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
I+V + ++ DW ++P +L +IM+HF+SG P++ G + D E DS +V
Sbjct: 61 ISVTRAEHGRDWSEMKPEILSVIMDHFVSGQPLMREGA---------DAVDHAEDDSEIV 111
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IK +LD+R+RPAVA+DGGDI+F + + G++ L MRGAC+GCPS++ TLK GV ++
Sbjct: 112 AEIKSLLDSRIRPAVAQDGGDILFDAFDEESGVLRLRMRGACAGCPSSAMTLKAGVEQMM 171
Query: 177 NHFVPEVKDIRTV 189
H+VPEV + V
Sbjct: 172 RHYVPEVTSVEQV 184
>gi|326497811|dbj|BAJ94768.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521670|dbj|BAK00411.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 174 bits (440), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 123/189 (65%), Gaps = 8/189 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F PG+ V+ G+ F NA+ A SPLA +F+I G+ V+FG DF
Sbjct: 68 MFIQTQSTPNPQSLMFHPGKPVMDVGSSDFPNARTAMTSPLAKALFAIEGVTRVFFGSDF 127
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D+ W++L+P V IM+ + SG P+ + +D E DS +V
Sbjct: 128 VTVTKSDETSWDYLKPEVFAAIMDFYSSGQPLFLDSNTA-AAMDTA----IHEDDSEIVA 182
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 183 MIKELLETRIRPAVQDDGGDIEYRGFEPETGIVKLKMQGACSGCPSSSVTLKSGIENMLM 242
Query: 178 HFVPEVKDI 186
H+VPEVK +
Sbjct: 243 HYVPEVKGV 251
>gi|149727512|ref|XP_001491099.1| PREDICTED: similar to HIRA interacting protein 5 isoform 1 [Equus
caballus]
Length = 253
Score = 174 bits (440), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 123/192 (64%), Gaps = 12/192 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 58 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 117
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF-IESDSAV 117
ITV K+ + DW L+P + IM+ F SG P++ ++ SG+ E D V
Sbjct: 118 ITVTKESEELDWNLLKPDIYATIMDFFASGLPLVT---------EETSSGEAGSEEDDEV 168
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 169 VAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ 228
Query: 178 HFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 229 FYIPEVEGVEQV 240
>gi|71021777|ref|XP_761119.1| hypothetical protein UM04972.1 [Ustilago maydis 521]
gi|46100569|gb|EAK85802.1| hypothetical protein UM04972.1 [Ustilago maydis 521]
Length = 293
Score = 174 bits (440), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 126/195 (64%), Gaps = 12/195 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPN +LKF+PG+ V+ G F + + + SPLA ++F+IPG+ SV++G DF
Sbjct: 72 MFIQTESTPNEDSLKFLPGRQVMESGTHEFLDTRSSMASPLAKKLFNIPGVVSVFYGPDF 131
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD--FIESDSAV 117
+TV KD ++ W L+P + IME F SG P+ + GS D +++DS V
Sbjct: 132 VTVSKDAEHQWSILKPEIYSSIMEFFTSGHPLFTDPESA------AGSQDTVILDTDSEV 185
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY---RDGIVFLSMRGACSGCPSASETLKYGVAN 174
V IKE+LD RVRPA+ DGGD+ ++G+ DGIV + ++G+C GC S++ TLK G+
Sbjct: 186 VAMIKELLDTRVRPAIQEDGGDLEYRGFGEDTDGIVKVKLKGSCRGCDSSTVTLKSGIER 245
Query: 175 ILNHFVPEVKDIRTV 189
+L H++PEVK + V
Sbjct: 246 MLMHYIPEVKGVEQV 260
>gi|157167461|ref|XP_001654807.1| hypothetical protein AaeL_AAEL002148 [Aedes aegypti]
gi|108882432|gb|EAT46657.1| conserved hypothetical protein [Aedes aegypti]
Length = 263
Score = 174 bits (440), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 124/192 (64%), Gaps = 11/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G + F A SPLA +F I G+ SV+FG D
Sbjct: 55 MFIQTQDTPNPDSLKFLPGVAVLEKGQTMDFPTQAAALCSPLAKLLFRIEGVRSVFFGAD 114
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGG-LGDMKLDDMGSGDFIESDSAV 117
F+T+ K ++ +W ++P V +IM+ F SG P++ + +GD +++ E D
Sbjct: 115 FVTISKHEEAEWRLIKPEVFAVIMDFFASGLPVVTDAKPMGDTQIN--------EDDDET 166
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
VQ IKE+LD+++RP V DGGDI+F + DG+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 167 VQMIKELLDSKIRPTVQEDGGDIIFMAFEDGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQ 226
Query: 178 HFVPEVKDIRTV 189
++PEV + V
Sbjct: 227 FYIPEVVAVEQV 238
>gi|224110188|ref|XP_002315442.1| predicted protein [Populus trichocarpa]
gi|222864482|gb|EEF01613.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 173 bits (439), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 122/190 (64%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP++L F PG+ V+ G+ F NA+ A SPLA I+ I GI V+FG DF
Sbjct: 78 MFIQTQSTPNPSSLMFYPGKPVMDVGSADFPNARSAMNSPLAKAIYGIDGINRVFFGPDF 137
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
IT+ K D WE L+P + IM+ + SG+P+ + K + E DS V
Sbjct: 138 ITITKSDDATWEFLKPEIFAAIMDFYSSGEPLFLDSQTAAAKDTAIS-----EDDSETVA 192
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ + GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 193 MIKELLETRIRPAVQDDGGDIEYQGFDEETGIVKLKMQGACSGCPSSSVTLKSGIENMLM 252
Query: 178 HFVPEVKDIR 187
H+VPEVK +
Sbjct: 253 HYVPEVKGVE 262
>gi|195132295|ref|XP_002010579.1| GI14603 [Drosophila mojavensis]
gi|193909029|gb|EDW07896.1| GI14603 [Drosophila mojavensis]
Length = 259
Score = 173 bits (439), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 121/191 (63%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G + F + A SPLA +F + G+ +V+FG D
Sbjct: 40 MFIQTQDTPNPDSLKFLPGVEVLGKGNTYDFPSGAAAHCSPLAKLLFRVEGVRAVFFGGD 99
Query: 60 FITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K++ +W ++P V +IM+ F SG PI+H + +E D V
Sbjct: 100 FITISKEESGEWGLIKPEVFAIIMDFFASGLPILHEARAN-------ADTEILEDDDETV 152
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF GY +G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 153 MMIKELLDTRIRPTVQEDGGDIVFMGYENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 212
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 213 YIPEVESVEQV 223
>gi|281346707|gb|EFB22291.1| hypothetical protein PANDA_002901 [Ailuropoda melanoleuca]
Length = 186
Score = 173 bits (439), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 123/192 (64%), Gaps = 12/192 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 4 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 63
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF-IESDSAV 117
ITV K+ + DW L+P + IM+ F SG P++ ++ SG+ E D V
Sbjct: 64 ITVTKESEELDWNLLKPDIYATIMDFFASGLPLVT---------EETSSGEAGSEEDDEV 114
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 115 VAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ 174
Query: 178 HFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 175 FYIPEVEGVEQV 186
>gi|73970249|ref|XP_855433.1| PREDICTED: similar to HIRA interacting protein 5 isoform 2 [Canis
familiaris]
Length = 253
Score = 173 bits (439), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 123/192 (64%), Gaps = 12/192 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 58 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 117
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF-IESDSAV 117
ITV K+ + DW L+P + IM+ F SG P++ ++ SG+ E D V
Sbjct: 118 ITVTKESEELDWNLLKPDIYATIMDFFASGLPLV---------TEETSSGEAGSEEDDEV 168
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 169 VAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ 228
Query: 178 HFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 229 FYIPEVEGVEQV 240
>gi|195059008|ref|XP_001995543.1| GH17809 [Drosophila grimshawi]
gi|263505270|sp|B4JWR9|NFU1_DROGR RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|193896329|gb|EDV95195.1| GH17809 [Drosophila grimshawi]
Length = 298
Score = 173 bits (439), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 120/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G + F +A A SPLA +F + G+ +V+FG D
Sbjct: 79 MFIQTQDTPNPDSLKFLPGVEVLGKGNTYDFPSATAAHCSPLAKLLFRVEGVRAVFFGSD 138
Query: 60 FITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K++ +W ++P V +IM+ F SG PI+H + +E D V
Sbjct: 139 FITISKEENGEWGLIKPEVFAVIMDFFASGLPILHEARPN-------ADTEILEDDDETV 191
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF Y G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 192 MMIKELLDTRIRPTVQEDGGDIVFISYEKGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 251
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 252 YIPEVESVEQV 262
>gi|312070286|ref|XP_003138076.1| hypothetical protein LOAG_02490 [Loa loa]
gi|307766755|gb|EFO25989.1| hypothetical protein LOAG_02490 [Loa loa]
Length = 220
Score = 173 bits (439), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 126/193 (65%), Gaps = 8/193 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG--AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
MFIQ +TPNPATLKFIPG++++ +G + F N A+ SPLA +F I G+ SV+FG
Sbjct: 1 MFIQVHETPNPATLKFIPGRMIMGKGRGTLDFGNFLSAKRSPLAMELFRINGVKSVFFGE 60
Query: 59 DFITVGKDQY--DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
D++T+ K DW L+P + ++M++ S PII G + D + DS
Sbjct: 61 DYVTITKQNEVDDWALLKPEIFAVLMDYLQSEKPIISEGEMPKGPED----TEIHPEDSD 116
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V IKE+L+ R++P V DGGD+++KG+ DG+V L M+G+C+GCPS+S TL++G+ N+L
Sbjct: 117 TVAMIKELLECRIKPMVQEDGGDVIYKGFHDGVVHLKMQGSCTGCPSSSVTLQFGIKNML 176
Query: 177 NHFVPEVKDIRTV 189
+VPEVKD+ V
Sbjct: 177 QFYVPEVKDVLEV 189
>gi|66543732|ref|XP_395826.2| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Apis mellifera]
Length = 275
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/187 (46%), Positives = 122/187 (65%), Gaps = 12/187 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG +L +G F NA + SPLA +F I G+ SV+FG D
Sbjct: 64 MFIQTQDTPNPNSLKFLPGVKILEQGQTKDFPNAIDGYCSPLAKMLFRIDGVKSVFFGPD 123
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGG-LGDMKLDDMGSGDFIESDSA 116
FIT+ K + +W+ L+P + +IM+ F SG P++ + D ++ D DS
Sbjct: 124 FITITKADEDVEWKLLKPEIFAVIMDFFASGLPVLTDEQPAADTQISD--------DDSE 175
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+VQ IKE+LD R+RP V DGGDIVF G+ +GIV L M+G+C+ CPS+ TLK GV N++
Sbjct: 176 IVQMIKELLDTRIRPTVQEDGGDIVFMGFEEGIVKLKMQGSCTSCPSSVITLKNGVQNMM 235
Query: 177 NHFVPEV 183
++PEV
Sbjct: 236 QFYIPEV 242
>gi|195482335|ref|XP_002102005.1| GE15286 [Drosophila yakuba]
gi|263505516|sp|B4PZ52|NFU1_DROYA RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194189529|gb|EDX03113.1| GE15286 [Drosophila yakuba]
Length = 283
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 119/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G + F N A SPLA +F + G+ V+FG D
Sbjct: 67 MFIQTQDTPNPDSLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFFGAD 126
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+T+ K + +W ++P V +IM+ F SG P++H+ + +E D V
Sbjct: 127 FVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLHDA-------QPNADTEILEDDDETV 179
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF GY G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 180 MMIKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 239
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 240 YIPEVESVEQV 250
>gi|254295433|ref|YP_003061456.1| Scaffold protein Nfu/NifU [Hirschia baltica ATCC 49814]
gi|254043964|gb|ACT60759.1| Scaffold protein Nfu/NifU [Hirschia baltica ATCC 49814]
Length = 190
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 125/190 (65%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP TLKF+PG+ V + F N KEA SPLA+ +F++ G+ +V+ G DF
Sbjct: 1 MFIQTEATPNPETLKFLPGREVSPKTPYEFLNEKEAGSSPLAAFLFTLKGVKTVFLGADF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+ + K Q DW L+P L IM+HF+SG P++ + + + G+ ++ +V
Sbjct: 61 VALTKTQETDWAILKPQALAAIMDHFVSGMPVMADYSDPAPVEEVIYEGE----NAEIVA 116
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+++ RVRPAVA DGGDI+F+ + G+V L MRGAC+GCPS++ TLK G+ N+L
Sbjct: 117 EIKELIETRVRPAVANDGGDIIFEKFDVDTGVVTLQMRGACAGCPSSTMTLKSGIENMLR 176
Query: 178 HFVPEVKDIR 187
H+VPEV +
Sbjct: 177 HYVPEVTAVE 186
>gi|111035797|emb|CAL29424.1| NifU-related protein [Wolbachia endosymbiont of Onchocerca
volvulus]
Length = 194
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 132/192 (68%), Gaps = 6/192 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ ++TPN TLKF+PG ++L EG + FS+A E + S LA+ +F I + V+FG+D
Sbjct: 5 MFIQIKETPNLNTLKFLPGFMILNEGETVDFSSANETKNSKLAANLFRIEHVIRVFFGHD 64
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE-SDSAV 117
FI+V K D +W L+ VL IM+HF S + G D +D+ +F + SD+ +
Sbjct: 65 FISVTKSDDINWNTLKVEVLTTIMDHFASSGKALDREGTND---NDILEEEFFDKSDTEI 121
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V RI+E++++ ++PAV +DGGDI F+GY++GIV++ ++GACSGCPSA+ TLK G+ N+L
Sbjct: 122 VSRIRELMESYIKPAVVQDGGDIKFRGYKNGIVYVELQGACSGCPSATITLKQGIQNMLC 181
Query: 178 HFVPEVKDIRTV 189
+ +PE+ I T+
Sbjct: 182 YHIPEILGIDTI 193
>gi|332813521|ref|XP_003309120.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Pan troglodytes]
gi|5738608|emb|CAB53015.1| HIRA-interacting protein HIRIP5 [Homo sapiens]
gi|62822279|gb|AAY14828.1| unknown [Homo sapiens]
gi|189054196|dbj|BAG36716.1| unnamed protein product [Homo sapiens]
Length = 196
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 1 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 60
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ + + GS E D VV
Sbjct: 61 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTE----ETPSGEAGS----EEDDEVV 112
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 113 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 172
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 173 YIPEVEGVEQV 183
>gi|326932642|ref|XP_003212423.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Meleagris gallopavo]
Length = 233
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 121/189 (64%), Gaps = 9/189 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + FS+ A SPLA ++F I G+ S++FG DF
Sbjct: 36 MFIQTQDTPNPNSLKFIPGKEVLDSRTMEFSSPAAAFCSPLARQLFRIEGVKSIFFGPDF 95
Query: 61 ITVGKDQ--YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K+ DW L+P + IM+ F SG P++ + D S E D VV
Sbjct: 96 ITITKESEDLDWNLLKPDIYATIMDFFASGLPVLTEEA---PRTDTAQS----EEDDEVV 148
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 149 LMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 208
Query: 179 FVPEVKDIR 187
++PEV+ +
Sbjct: 209 YIPEVEGVE 217
>gi|114577877|ref|XP_001137587.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 7 [Pan troglodytes]
Length = 230
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 123/192 (64%), Gaps = 12/192 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 35 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 94
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF-IESDSAV 117
ITV K+ + DW L+P + IM+ F SG P++ ++ SG+ E D V
Sbjct: 95 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVT---------EETPSGEAGSEEDDEV 145
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 146 VAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ 205
Query: 178 HFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 206 FYIPEVEGVEQV 217
>gi|50593025|ref|NP_056515.2| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 1
[Homo sapiens]
gi|32967071|gb|AAP92373.1| cytosolic iron-sulfur cluster scaffold protein Nfu [Homo sapiens]
gi|119620256|gb|EAW99850.1| HIRA interacting protein 5, isoform CRA_b [Homo sapiens]
Length = 230
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 123/192 (64%), Gaps = 12/192 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 35 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 94
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF-IESDSAV 117
ITV K+ + DW L+P + IM+ F SG P++ ++ SG+ E D V
Sbjct: 95 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVT---------EETPSGEAGSEEDDEV 145
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 146 VAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ 205
Query: 178 HFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 206 FYIPEVEGVEQV 217
>gi|241761631|ref|ZP_04759718.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|260753996|ref|YP_003226889.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|241373939|gb|EER63472.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|258553359|gb|ACV76305.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 183
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 127/191 (66%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M I+TE TPNPATLKF+ + V+ + +F N +EA SPLA +F + + +V++G DF
Sbjct: 1 MLIETEKTPNPATLKFLLHRPVMERESRYFVNKEEAADSPLAVALFDLQHVTAVFYGRDF 60
Query: 61 ITVGKDQYD-WEHLRPPVLGMIMEHFISGDPI-IHNGGLGDMKLDDMGSGDFIESDSAVV 118
I+V D W +L ++ +I +HF + P+ + N + K D E D ++
Sbjct: 61 ISVTLDSPSLWSNLESKIIMIISDHFDNDIPLLVENSEKNETK-------DHDEEDDVIL 113
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
Q IK+++D+RVRPAVARDGGDIVF+ + DGIV+LSMRGAC+GCPS+ TLK GV +L H
Sbjct: 114 Q-IKDLIDSRVRPAVARDGGDIVFQKFEDGIVYLSMRGACAGCPSSVATLKQGVETLLKH 172
Query: 179 FVPEVKDIRTV 189
FVPE+K++R +
Sbjct: 173 FVPEIKEVRAI 183
>gi|254420655|ref|ZP_05034379.1| Scaffold protein Nfu/NifU N terminal [Brevundimonas sp. BAL3]
gi|196186832|gb|EDX81808.1| Scaffold protein Nfu/NifU N terminal [Brevundimonas sp. BAL3]
Length = 185
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 121/190 (63%), Gaps = 13/190 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF+PG+ V + + A SPLA +F + G+ V+FG D+
Sbjct: 1 MFIQTEPTPNPNVLKFLPGREVSPLAVLDYRTIDAATASPLAEALFELEGVDGVFFGADY 60
Query: 61 ITVGKDQY--DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
++V + + DW ++ P+LG+IM+HF+SG P+ G + +D DS +V
Sbjct: 61 VSVTRQERGPDWSEMKAPILGVIMDHFVSGRPLTVAGSETETHAED---------DSEIV 111
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IK +LD+R+RPAVA+DGGDI+F + + G++ L MRGACSGCPS+S TLK GV ++
Sbjct: 112 AEIKALLDSRIRPAVAQDGGDILFDAFDEATGVLSLRMRGACSGCPSSSATLKAGVEQMM 171
Query: 177 NHFVPEVKDI 186
H+VPEV +
Sbjct: 172 RHYVPEVTRV 181
>gi|194897711|ref|XP_001978709.1| GG17526 [Drosophila erecta]
gi|263504966|sp|B3NYF7|NFU1_DROER RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|190650358|gb|EDV47636.1| GG17526 [Drosophila erecta]
Length = 283
Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 119/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G + F N A SPLA +F + G+ V+FG D
Sbjct: 67 MFIQTQDTPNPDSLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFFGAD 126
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+T+ K + +W ++P V +IM+ F SG P++H+ + +E D V
Sbjct: 127 FVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLHDA-------QPNADTEILEDDDETV 179
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF GY G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 180 MMIKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 239
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 240 YIPEVESVEQV 250
>gi|55596270|ref|XP_525775.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 8 [Pan troglodytes]
gi|332813518|ref|XP_001137508.2| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 6 [Pan troglodytes]
Length = 254
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 123/192 (64%), Gaps = 12/192 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 59 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 118
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF-IESDSAV 117
ITV K+ + DW L+P + IM+ F SG P++ ++ SG+ E D V
Sbjct: 119 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVT---------EETPSGEAGSEEDDEV 169
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 170 VAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ 229
Query: 178 HFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 230 FYIPEVEGVEQV 241
>gi|242086973|ref|XP_002439319.1| hypothetical protein SORBIDRAFT_09g004310 [Sorghum bicolor]
gi|241944604|gb|EES17749.1| hypothetical protein SORBIDRAFT_09g004310 [Sorghum bicolor]
Length = 268
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 124/189 (65%), Gaps = 8/189 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F PG+ V+ G+ F NA+ A SPLA +F+I G+ ++FG DF
Sbjct: 71 MFIQTQSTPNPQSLMFYPGKPVMEVGSSDFPNARTAMTSPLAKALFAIDGVTRIFFGSDF 130
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K ++ W++L+P V IM+ + SG P+ + +D E DS +V
Sbjct: 131 VTVTKSEETSWDYLKPEVFAAIMDFYSSGQPLFLDSNAA-ASMDTA----IHEDDSEIVA 185
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ +GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 186 MIKELLETRIRPAVQDDGGDIEYRGFDPENGIVKLKMQGACSGCPSSSVTLKSGIENMLM 245
Query: 178 HFVPEVKDI 186
H+VPEVK +
Sbjct: 246 HYVPEVKGV 254
>gi|301758232|ref|XP_002914967.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Ailuropoda melanoleuca]
Length = 420
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 123/192 (64%), Gaps = 12/192 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 225 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 284
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF-IESDSAV 117
ITV K+ + DW L+P + IM+ F SG P++ ++ SG+ E D V
Sbjct: 285 ITVTKESEELDWNLLKPDIYATIMDFFASGLPLV---------TEETSSGEAGSEEDDEV 335
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 336 VAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ 395
Query: 178 HFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 396 FYIPEVEGVEQV 407
>gi|47212055|emb|CAF90173.1| unnamed protein product [Tetraodon nigroviridis]
Length = 196
Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 123/191 (64%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MF+QT+DTPNP +LKF+PG VL G ++F + ++A SPLA ++F + G+ SV G DF
Sbjct: 1 MFVQTQDTPNPNSLKFLPGCTVLETGTMNFDSPRDAHCSPLARQLFRVDGVKSVLLGPDF 60
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K DW+ ++P V IM+ F SG P++ G +++D D D +V
Sbjct: 61 ITISKIDANIDWKVIKPDVFATIMDFFTSGLPVVSEGS---KQIEDTAPSD---DDDELV 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ G+V L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 115 AMIKELLDTRIRPTVQEDGGDVLYRGFEGGVVKLKLQGSCTSCPSSIITLKSGIQNMLQF 174
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 175 YIPEVESVEQV 185
>gi|34500319|gb|AAQ73784.1| NifU-like protein HIRIP5 [Homo sapiens]
gi|194374137|dbj|BAG62381.1| unnamed protein product [Homo sapiens]
Length = 254
Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 123/192 (64%), Gaps = 12/192 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 59 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 118
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF-IESDSAV 117
ITV K+ + DW L+P + IM+ F SG P++ ++ SG+ E D V
Sbjct: 119 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLV---------TEETPSGEAGSEEDDEV 169
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 170 VAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ 229
Query: 178 HFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 230 FYIPEVEGVEQV 241
>gi|114577887|ref|XP_001137189.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
Length = 248
Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 59 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 118
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ + + GS E D VV
Sbjct: 119 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTE----ETPSGEAGS----EEDDEVV 170
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 171 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 230
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 231 YIPEVEGVEQV 241
>gi|50593021|ref|NP_001002755.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2
[Homo sapiens]
gi|205371805|sp|Q9UMS0|NFU1_HUMAN RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; AltName: Full=HIRA-interacting protein 5;
Flags: Precursor
gi|32967069|gb|AAP92372.1| iron-sulfur cluster scaffold protein Nfu [Homo sapiens]
gi|109731123|gb|AAI13693.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Homo
sapiens]
gi|109731125|gb|AAI13695.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Homo
sapiens]
gi|119620255|gb|EAW99849.1| HIRA interacting protein 5, isoform CRA_a [Homo sapiens]
gi|261860742|dbj|BAI46893.1| NFU1 iron-sulfur cluster scaffold homolog [synthetic construct]
gi|313884030|gb|ADR83501.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)
[synthetic construct]
Length = 254
Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 123/192 (64%), Gaps = 12/192 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 59 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 118
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF-IESDSAV 117
ITV K+ + DW L+P + IM+ F SG P++ ++ SG+ E D V
Sbjct: 119 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLV---------TEETPSGEAGSEEDDEV 169
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 170 VAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ 229
Query: 178 HFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 230 FYIPEVEGVEQV 241
>gi|114053059|ref|NP_001040031.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial [Bos
taurus]
gi|86823819|gb|AAI05370.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Bos
taurus]
gi|296482427|gb|DAA24542.1| HIRA interacting protein 5 [Bos taurus]
Length = 253
Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 58 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPATAFRSPLARQLFRIEGVKSVFFGPDF 117
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ + + GS E D VV
Sbjct: 118 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTE----ETPSGEAGS----EDDDEVV 169
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 170 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 229
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 230 YIPEVEGVEQV 240
>gi|332226734|ref|XP_003262547.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like isoform 3 [Nomascus leucogenys]
Length = 230
Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 123/192 (64%), Gaps = 12/192 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 35 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 94
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF-IESDSAV 117
IT+ K+ + DW L+P + IM+ F SG P++ ++ SG+ E D V
Sbjct: 95 ITITKENEELDWNLLKPDIYATIMDFFASGLPLVT---------EETPSGEAGSEEDDEV 145
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 146 VAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ 205
Query: 178 HFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 206 FYIPEVEGVEQV 217
>gi|126304005|ref|XP_001381686.1| PREDICTED: similar to iron-sulfur cluster scaffold protein Nfu
[Monodelphis domestica]
Length = 235
Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+ G DF
Sbjct: 40 MFIQTQDTPNPNSLKFIPGKSVLGSQTMDFPTPATAFRSPLARQLFRIEGVKSVFLGPDF 99
Query: 61 ITVGKDQ--YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ DW L+P + IM+ F SG PI+ + S E D VV
Sbjct: 100 ITVTKESEDLDWNLLKPDIYATIMDFFASGLPILTE--------ETPSSETATEEDDEVV 151
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 152 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 211
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 212 YIPEVEGVEQV 222
>gi|31874276|emb|CAD98142.1| hypothetical protein [Homo sapiens]
Length = 242
Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 59 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 118
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ + + GS E D VV
Sbjct: 119 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTE----ETPSGEAGS----EEDDEVV 170
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 171 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 230
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 231 YIPEVEGVEQV 241
>gi|17541876|ref|NP_501917.1| LiPid Depleted family member (lpd-8) [Caenorhabditis elegans]
gi|3879150|emb|CAA94609.1| C. elegans protein R10H10.1, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 222
Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 120/190 (63%), Gaps = 13/190 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA--IHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
M+IQ ++TPNP +LKF+PGQ +L + + FS+A A+ SPLA ++ + G+ V+FG
Sbjct: 16 MYIQVQETPNPLSLKFLPGQQLLPDASKTYDFSSAATAKQSPLAIKLLRVDGVKRVFFGE 75
Query: 59 DFITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
DF+TV K + DW LRP + I +H +G P+I+ D +E D
Sbjct: 76 DFVTVTKSDETVDWALLRPEIFSTIADHIQTGKPVINEAA---------TVSDQVEEDDE 126
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
VV IKE+L+ R+RP V DGGDI + G+ DG+V L M+G+C+GCPS+ TLK G+ N+L
Sbjct: 127 VVMMIKEILETRIRPMVQEDGGDITYVGFDDGVVKLKMQGSCTGCPSSGVTLKNGIENML 186
Query: 177 NHFVPEVKDI 186
+VPEVK++
Sbjct: 187 TFYVPEVKEV 196
>gi|332226730|ref|XP_003262545.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like isoform 1 [Nomascus leucogenys]
gi|332226732|ref|XP_003262546.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like isoform 2 [Nomascus leucogenys]
Length = 254
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 123/192 (64%), Gaps = 12/192 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 59 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 118
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF-IESDSAV 117
IT+ K+ + DW L+P + IM+ F SG P++ ++ SG+ E D V
Sbjct: 119 ITITKENEELDWNLLKPDIYATIMDFFASGLPLVT---------EETPSGEAGSEEDDEV 169
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 170 VAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ 229
Query: 178 HFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 230 FYIPEVEGVEQV 241
>gi|283856470|ref|YP_163150.2| scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ZM4]
gi|283775474|gb|AAV90039.2| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ZM4]
Length = 183
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 128/191 (67%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M I+TE TPNPATLKF+ + V+ + +F N +EA SPLA +F + + +V++G DF
Sbjct: 1 MLIETEKTPNPATLKFLLHRPVMERESRYFVNKEEAADSPLAVALFDLQHVTAVFYGRDF 60
Query: 61 ITVGKDQYD-WEHLRPPVLGMIMEHFISGDPI-IHNGGLGDMKLDDMGSGDFIESDSAVV 118
I+V D W +L ++ +I +HF + P+ + N ++K D E D ++
Sbjct: 61 ISVTLDSPSLWSNLESKIIMIISDHFDNDIPLLVENFEKNEIK-------DHDEEDDVIL 113
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
Q IK+++D+RVRPAVARDGGDIVF+ + DGIV+LSMRGAC+GCPS+ TLK GV +L H
Sbjct: 114 Q-IKDLIDSRVRPAVARDGGDIVFQKFEDGIVYLSMRGACAGCPSSVATLKQGVETLLKH 172
Query: 179 FVPEVKDIRTV 189
FVPE+K++R +
Sbjct: 173 FVPEIKEVRAI 183
>gi|158288625|ref|XP_310479.4| AGAP000598-PA [Anopheles gambiae str. PEST]
gi|157018658|gb|EAA06366.4| AGAP000598-PA [Anopheles gambiae str. PEST]
Length = 226
Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 120/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G + F + A+ SPLA +F + G+ +V+FG D
Sbjct: 11 MFIQTQDTPNPDSLKFLPGVPVLEKGQTMDFPSVSAAQCSPLAKLLFRVEGVRAVFFGGD 70
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+T+ K + +W ++P V +IM+ F SG P++ + F E D V
Sbjct: 71 FVTISKQEDAEWRIIKPEVFAVIMDFFASGLPVVTDAKPN-------PDTQFNEDDDETV 123
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
Q IKE+LD R+RP V DGGDI+F G+ DG+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 124 QMIKELLDTRIRPTVQEDGGDIIFMGFDDGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 183
Query: 179 FVPEVKDIRTV 189
++PEV + V
Sbjct: 184 YIPEVVSVEQV 194
>gi|322798976|gb|EFZ20436.1| hypothetical protein SINV_01605 [Solenopsis invicta]
Length = 226
Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 121/188 (64%), Gaps = 13/188 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKFIPG VL EG F +AK+A SPLA +F I G+ +++FG D
Sbjct: 15 MFIQTQDTPNPNSLKFIPGVSVLGEGCTKDFPSAKDAYCSPLAKMLFRIEGVKAIFFGPD 74
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGG--LGDMKLDDMGSGDFIESDS 115
FITV K + +W+ L+P V IM+ F +G P++ D +++ D
Sbjct: 75 FITVTKIDEDVEWKLLKPEVFATIMDFFATGLPVMDETSQPAADTQIN--------AEDD 126
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+VQ IKE+LD R+RP V DGGDIVF G+ +GIV L M+G+C+ CPS+ TL+ GV N+
Sbjct: 127 EIVQMIKELLDTRIRPTVQEDGGDIVFVGFEEGIVKLKMQGSCTNCPSSVVTLRNGVQNM 186
Query: 176 LNHFVPEV 183
+ ++PEV
Sbjct: 187 MQFYIPEV 194
>gi|324510498|gb|ADY44390.1| NFU1 iron-sulfur cluster scaffold [Ascaris suum]
Length = 213
Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 127/193 (65%), Gaps = 8/193 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLV--EGAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
MFIQ ++TPNP TLKF+PG+ VL G + F++ A+ SPLA ++F + G+ S++FG
Sbjct: 1 MFIQVQETPNPLTLKFLPGEPVLGPGRGTMDFTSVSAAKRSPLALQLFRVDGVKSIFFGE 60
Query: 59 DFITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
DFITV K ++ DW ++P + IM+ +G I+++G + D +D M D
Sbjct: 61 DFITVTKADEETDWAVMKPEIFATIMDFLQTGKAIVNDGEVPDGPMDTM----IHPEDDD 116
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V IKE+L++RV+P V DGGDI++KG+ DGIV L ++G+C+GCPS+ TLK G+ N+L
Sbjct: 117 TVAMIKELLESRVKPMVQEDGGDIIYKGFHDGIVHLKLKGSCTGCPSSLVTLKSGIKNML 176
Query: 177 NHFVPEVKDIRTV 189
+VPEV D+ V
Sbjct: 177 QFYVPEVVDVIEV 189
>gi|26324295|dbj|BAC24985.1| unnamed protein product [Mus musculus]
Length = 200
Score = 171 bits (433), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 120/191 (62%), Gaps = 7/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 1 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 60
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ + G E D VV
Sbjct: 61 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVT-----EETPPPPGEAGSSEEDDEVV 115
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 116 AMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQF 175
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 176 YIPEVEGVEQV 186
>gi|307215410|gb|EFN90079.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Harpegnathos saltator]
Length = 265
Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 119/186 (63%), Gaps = 13/186 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKFIPG VL EG F NAK+A SPLA +F I G+ +++FG D
Sbjct: 56 MFIQTQDTPNPNSLKFIPGVSVLGEGCTKDFPNAKDAYCSPLAKMLFRIEGVKAIFFGPD 115
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FITV K + +W+ L+P + IM+ F SG PI+ L D S D D V
Sbjct: 116 FITVTKLDEDIEWKLLKPEIFATIMDFFASGLPIMDESQLA---ADTQISTD----DDEV 168
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
VQ IKE+LD R+RP V DGGDI G+ +GIV L M+G+C+ CPS+ TL+ GV N++
Sbjct: 169 VQMIKELLDTRIRPTVQEDGGDI---GFEEGIVKLKMQGSCTNCPSSVVTLRNGVQNMMQ 225
Query: 178 HFVPEV 183
++PEV
Sbjct: 226 FYIPEV 231
>gi|195357024|ref|XP_002044916.1| GM13534 [Drosophila sechellia]
gi|263505008|sp|B4IMF6|NFU1_DROSE RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194124051|gb|EDW46094.1| GM13534 [Drosophila sechellia]
Length = 283
Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 119/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G + F N A SPLA +F + G+ V+FG D
Sbjct: 67 MFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFFGAD 126
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K + +W ++P V +IM+ F SG P++++ + +E D V
Sbjct: 127 FITISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDA-------QPNADTEILEDDDETV 179
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF GY G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 180 MMIKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 239
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 240 YIPEVESVEQV 250
>gi|282154799|ref|NP_001100076.2| NFU1 iron-sulfur cluster scaffold homolog precursor [Rattus
norvegicus]
gi|149036647|gb|EDL91265.1| histone cell cycle regulation defective interacting protein 5
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 253
Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 57 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 116
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ + + GS E D VV
Sbjct: 117 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTE----ETPPGEAGS----EEDDEVV 168
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 169 AMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQF 228
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 229 YIPEVEGVEQV 239
>gi|114577889|ref|XP_001137105.1| PREDICTED: similar to HIRA interacting protein 5 isoform 1 [Pan
troglodytes]
Length = 240
Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 121/189 (64%), Gaps = 10/189 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 59 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 118
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ + + GS E D VV
Sbjct: 119 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTE----ETPSGEAGS----EEDDEVV 170
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 171 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 230
Query: 179 FVPEVKDIR 187
++PEV+ +
Sbjct: 231 YIPEVEGVE 239
>gi|325087305|gb|ADY77002.1| iron-sulfur cluster assembly protein NFU4 [Ipomoea batatas]
gi|325087311|gb|ADY77005.1| iron-sulfur cluster assembly protein NFU4 [Ipomoea batatas]
Length = 281
Score = 171 bits (432), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 119/189 (62%), Gaps = 8/189 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F PG+ V+ G+ F NA+ A SPLA +F I GI V++G DF
Sbjct: 80 MFIQTQSTPNPLSLMFYPGKPVMETGSADFPNARSAMNSPLAKALFGIDGITRVFYGSDF 139
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D W+ L+P + IM+ F SG P+ + +D E DS V
Sbjct: 140 VTVTKSDDASWDLLKPEIFAAIMDFFSSGKPLFLDSNTA-ASMDTA----IQEDDSETVA 194
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 195 MIKELLETRIRPAVQDDGGDIEYRGFDADSGIVKLRMQGACSGCPSSSVTLKSGIENMLM 254
Query: 178 HFVPEVKDI 186
H+VPEVK +
Sbjct: 255 HYVPEVKGV 263
>gi|196003412|ref|XP_002111573.1| hypothetical protein TRIADDRAFT_55734 [Trichoplax adhaerens]
gi|190585472|gb|EDV25540.1| hypothetical protein TRIADDRAFT_55734 [Trichoplax adhaerens]
Length = 236
Score = 170 bits (431), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 121/191 (63%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT DTPNP +LKF+PG VL G I +S+A++A SPLA +F + G+ SV+ G DF
Sbjct: 36 MFIQTLDTPNPNSLKFVPGVPVLGSGTIDYSSARDALTSPLAKNLFRVDGVKSVFLGPDF 95
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+T+ + D +W L+P + +IM+ F SG P++ + + DS V
Sbjct: 96 VTISRADDDIEWNTLKPDIYAVIMDFFASGAPVL-------IDYEPATDTAVQPEDSDTV 148
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+L+ R+RP + DGGDIV+ GY +GIV L M+GAC CPSA+ TLK+G+ N+L
Sbjct: 149 AMIKELLETRIRPTLQEDGGDIVYMGYDNGIVKLKMQGACDSCPSATVTLKHGIQNMLQF 208
Query: 179 FVPEVKDIRTV 189
++PEV+ + +
Sbjct: 209 YIPEVEGVEQI 219
>gi|148666782|gb|EDK99198.1| mCG130855, isoform CRA_b [Mus musculus]
Length = 256
Score = 170 bits (431), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 120/191 (62%), Gaps = 7/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 57 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 116
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ + G E D VV
Sbjct: 117 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLV-----TEETPPPPGEAGSSEEDDEVV 171
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 172 AMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQF 231
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 232 YIPEVEGVEQV 242
>gi|282154803|ref|NP_001164062.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 1
precursor [Mus musculus]
gi|74211556|dbj|BAE26508.1| unnamed protein product [Mus musculus]
Length = 256
Score = 170 bits (431), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 120/191 (62%), Gaps = 7/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 57 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 116
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ + G E D VV
Sbjct: 117 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLV-----TEETPPPPGEAGSSEEDDEVV 171
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 172 AMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQF 231
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 232 YIPEVEGVEQV 242
>gi|6760408|gb|AAF28338.1|AF213379_1 r10h10-like protein TO42 [Drosophila melanogaster]
gi|6554171|gb|AAF16622.1| TO42 [Drosophila melanogaster]
Length = 286
Score = 170 bits (431), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 119/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G + F N A SPLA +F + G+ V+FG D
Sbjct: 70 MFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHNSPLAKLLFRVEGVKGVFFGAD 129
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+T+ K + +W ++P V +IM+ F SG P++++ + +E D V
Sbjct: 130 FVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDA-------QPNADTEILEDDDETV 182
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF GY G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 183 MMIKELLDTRIRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 242
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 243 YIPEVESVEQV 253
>gi|115462181|ref|NP_001054690.1| Os05g0155300 [Oryza sativa Japonica Group]
gi|54291852|gb|AAV32220.1| unknown protein [Oryza sativa Japonica Group]
gi|113578241|dbj|BAF16604.1| Os05g0155300 [Oryza sativa Japonica Group]
gi|215697325|dbj|BAG91319.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630253|gb|EEE62385.1| hypothetical protein OsJ_17174 [Oryza sativa Japonica Group]
Length = 272
Score = 170 bits (431), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 123/189 (65%), Gaps = 8/189 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F PG+ V+ G+ F NA+ A SPLA +F+I G+ V+FG DF
Sbjct: 72 MFIQTQSTPNPQSLMFYPGKPVMEVGSSDFPNARTAMTSPLAKALFAIDGVTRVFFGSDF 131
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K ++ W++L+P V +IM+ + SG + + +D E DS +V
Sbjct: 132 VTVTKSEETSWDYLKPEVFAVIMDFYSSGQSLFLDSSTA-ASMDTA----IHEDDSEIVA 186
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 187 MIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSSSVTLKSGIENMLM 246
Query: 178 HFVPEVKDI 186
H+VPEVK +
Sbjct: 247 HYVPEVKGV 255
>gi|296087967|emb|CBI35250.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 170 bits (430), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 120/190 (63%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNPA+L F PG+ V+ G+ F N++ A SPLA ++ I GI V+FG DF
Sbjct: 1 MFIQTQSTPNPASLMFYPGKPVMEVGSADFPNSRSAMSSPLAKSLYGIDGITRVFFGSDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K D W+ ++P + IM+ + SG P+ + +D E DS V
Sbjct: 61 ITVTKSDDASWDFIKPEIFAAIMDFYSSGKPLFLDSNTA-AAMDTA----IHEDDSETVA 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 116 MIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSSSVTLKSGIENMLM 175
Query: 178 HFVPEVKDIR 187
H+VPEVK +
Sbjct: 176 HYVPEVKGVE 185
>gi|24643765|ref|NP_728443.1| CG32857 [Drosophila melanogaster]
gi|45551492|ref|NP_728447.2| CG32500 [Drosophila melanogaster]
gi|45556188|ref|NP_996529.1| CG33502 [Drosophila melanogaster]
gi|74866115|sp|Q8SY96|NFU1_DROME RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|17946577|gb|AAL49319.1| RH16335p [Drosophila melanogaster]
gi|22831388|gb|AAG22462.2| CG33502 [Drosophila melanogaster]
gi|22831391|gb|AAN09001.1| CG32857 [Drosophila melanogaster]
gi|45446754|gb|AAN09005.2| CG32500 [Drosophila melanogaster]
gi|220949278|gb|ACL87182.1| CG32500-PA [synthetic construct]
gi|220958368|gb|ACL91727.1| CG32500-PA [synthetic construct]
Length = 283
Score = 170 bits (430), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 119/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G + F N A SPLA +F + G+ V+FG D
Sbjct: 67 MFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHNSPLAKLLFRVEGVKGVFFGAD 126
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+T+ K + +W ++P V +IM+ F SG P++++ + +E D V
Sbjct: 127 FVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDA-------QPNADTEILEDDDETV 179
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF GY G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 180 MMIKELLDTRIRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 239
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 240 YIPEVESVEQV 250
>gi|114799747|ref|YP_759252.1| NifU domain-containing protein [Hyphomonas neptunium ATCC 15444]
gi|114739921|gb|ABI78046.1| NifU domain protein [Hyphomonas neptunium ATCC 15444]
Length = 192
Score = 170 bits (430), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 121/191 (63%), Gaps = 6/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQ-VVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNP T+KF+PGQ VV G F +A A S LA +F + G+ V+ G D
Sbjct: 1 MFIQTEATPNPDTIKFLPGQPVVGDRGPFDFPDAASARTSLLARALFQVEGVERVFLGSD 60
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+++ K Q DW H++P VL IM+H++SG P+I G D ++ + +V
Sbjct: 61 FVSINKAQDKDWRHVKPMVLAAIMDHYMSGLPVIEEGTSSASSGAD--ETEYEGETAEIV 118
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+++ RVRPAVA+DGGDI F + GIV LSMRGAC+GCPS++ TLK G+ N+L
Sbjct: 119 NEIKELIETRVRPAVAQDGGDITFHRFDADTGIVHLSMRGACAGCPSSTMTLKQGIENML 178
Query: 177 NHFVPEVKDIR 187
+VPEV +
Sbjct: 179 RTYVPEVTAVE 189
>gi|115946407|ref|XP_001184965.1| PREDICTED: similar to HIRA interacting protein 5
[Strongylocentrotus purpuratus]
Length = 209
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 118/194 (60%), Gaps = 14/194 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKF+PG VL G F +A A SPLA ++F I G+ V+FG DF
Sbjct: 1 MFIQTQDTPNPNSLKFLPGVEVLGTGTKDFPSAMNAHGSPLARQLFRIEGVQGVFFGPDF 60
Query: 61 ITVGK---DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD--FIESDS 115
ITV K D DW L+P + +M+ F +G PI+ D+ D E D
Sbjct: 61 ITVTKMDDDNIDWRVLKPEIYATVMDFFATGVPILT---------DETAPTDTEIQEDDD 111
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE+LD R+RP V DGGDIV+ G+ +G+V L ++GAC+ CPS+ TLK+GV N+
Sbjct: 112 ETVMMIKELLDTRIRPTVQEDGGDIVYMGFEEGVVKLKLQGACTSCPSSIVTLKHGVQNM 171
Query: 176 LNHFVPEVKDIRTV 189
L +VPEV + V
Sbjct: 172 LQFYVPEVLSVEAV 185
>gi|115953358|ref|XP_798698.2| PREDICTED: similar to HIRA interacting protein 5, partial
[Strongylocentrotus purpuratus]
Length = 211
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 118/194 (60%), Gaps = 14/194 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKF+PG VL G F +A A SPLA ++F I G+ V+FG DF
Sbjct: 3 MFIQTQDTPNPNSLKFLPGVEVLGTGTKDFPSAMNAHGSPLARQLFRIEGVQGVFFGPDF 62
Query: 61 ITVGK---DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD--FIESDS 115
ITV K D DW L+P + +M+ F +G PI+ D+ D E D
Sbjct: 63 ITVTKMDDDNIDWRVLKPEIYATVMDFFATGVPILT---------DETAPTDTEIQEDDD 113
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE+LD R+RP V DGGDIV+ G+ +G+V L ++GAC+ CPS+ TLK+GV N+
Sbjct: 114 ETVMMIKELLDTRIRPTVQEDGGDIVYMGFEEGVVKLKLQGACTSCPSSIVTLKHGVQNM 173
Query: 176 LNHFVPEVKDIRTV 189
L +VPEV + V
Sbjct: 174 LQFYVPEVLSVEAV 187
>gi|225717260|gb|ACO14476.1| NFU1 iron-sulfur cluster scaffold homolog [Esox lucius]
Length = 253
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 121/191 (63%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKF+PG +VL G + F+ +EA PLA ++F I G+ V+ G DF
Sbjct: 59 MFIQTQDTPNPNSLKFLPGCMVLERGTMDFAAPREAYCCPLARQLFGIDGVKGVFLGPDF 118
Query: 61 ITVGKDQYD--WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K D W+ ++P V IM+ F SG P+++ D D D D V+
Sbjct: 119 ITITKANVDLEWKLIKPDVFAAIMDFFASGLPVMNEE---DTPRADTAPSD---DDDEVI 172
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 173 TMIKELLDTRIRPTVQEDGGDVLYRGFEDGIVKLKLQGSCTSCPSSIVTLKSGIQNMLQF 232
Query: 179 FVPEVKDIRTV 189
+VPEV+ + V
Sbjct: 233 YVPEVEGVEQV 243
>gi|268570156|ref|XP_002648431.1| C. briggsae CBR-LPD-8 protein [Caenorhabditis briggsae]
gi|187039912|emb|CAP21246.1| CBR-LPD-8 protein [Caenorhabditis briggsae AF16]
Length = 228
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 121/190 (63%), Gaps = 12/190 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA--IHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
M+IQ ++TPNP +LKF+PGQ +L + + FS+A A+ SPLA ++ + G+ V+FG
Sbjct: 21 MYIQVQETPNPLSLKFLPGQQLLPDASKTYDFSSAATAKQSPLAIKLLRVDGVKRVFFGE 80
Query: 59 DFITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
DFITV K + DW LRP + I +H +G +I+ +G+ E D+
Sbjct: 81 DFITVTKSDETVDWALLRPEIFSTIADHLQTGKSVINEAS--------ATAGEAEEDDNE 132
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
VV IKE+L+ R+RP V DGGDI + G+ DG+V L M+G+C+GCPS+ TLK G+ N+L
Sbjct: 133 VVMMIKEILETRIRPMVQEDGGDITYVGFDDGVVKLKMQGSCTGCPSSGVTLKNGIENML 192
Query: 177 NHFVPEVKDI 186
+VPEVK++
Sbjct: 193 TFYVPEVKEV 202
>gi|125550903|gb|EAY96612.1| hypothetical protein OsI_18522 [Oryza sativa Indica Group]
Length = 272
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 122/189 (64%), Gaps = 8/189 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F PG+ V+ G+ F NA+ A SPLA +F+I G+ V+FG DF
Sbjct: 72 MFIQTQSTPNPQSLMFYPGKPVMEVGSSDFPNARTAMTSPLAKALFAIDGVTRVFFGSDF 131
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K ++ W++L+P V IM+ + SG + + +D E DS +V
Sbjct: 132 VTVTKSEETSWDYLKPEVFAAIMDFYSSGQSLFLDSSTA-ASMDTA----IHEDDSEIVA 186
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 187 MIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSSSVTLKSGIENMLM 246
Query: 178 HFVPEVKDI 186
H+VPEVK +
Sbjct: 247 HYVPEVKGV 255
>gi|156548302|ref|XP_001602506.1| PREDICTED: similar to protein phosphatase 2a [Nasonia vitripennis]
Length = 511
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 121/194 (62%), Gaps = 14/194 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKFIPG VL +G F +A +A SPLA +F I G+ SV+FG D
Sbjct: 67 MFIQTQDTPNPNSLKFIPGVEVLGKGQTKDFPSATDAFCSPLAKMLFRIEGVKSVFFGSD 126
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI--ESDS 115
FIT+ K + +W+ ++P + IM+ F SG PI S D + E D
Sbjct: 127 FITITKIDEDVEWKLIKPEIFATIMDFFASGLPIFTEA---------QSSSDTVINEDDD 177
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+VQ IKE+LD R+RP V DGGDIVF G+ +GIV L M+G+C+ CPS+ TLK GV N+
Sbjct: 178 EIVQMIKELLDTRIRPTVQEDGGDIVFMGFENGIVKLKMQGSCTSCPSSVVTLKNGVQNM 237
Query: 176 LNHFVPEVKDIRTV 189
+ ++PEV + V
Sbjct: 238 MQFYIPEVLGVEQV 251
>gi|6013069|emb|CAB57314.1| HIRA-interacting protein (HIRIP5) [Mus musculus]
gi|17390830|gb|AAH18355.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Mus
musculus]
Length = 199
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 121/191 (63%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 1 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 60
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ + GS E D VV
Sbjct: 61 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPP--PPGEAGS----EEDDEVV 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 115 AMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQF 174
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 175 YIPEVEGVEQV 185
>gi|51473845|ref|YP_067602.1| hypothetical protein RT0659 [Rickettsia typhi str. Wilmington]
gi|51460157|gb|AAU04120.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
Length = 190
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 129/191 (67%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTEDTPNP +KF PGQ + ++ + FS E + S LA +F I + SV+FG D
Sbjct: 1 MFIQTEDTPNPDAIKFFPGQEISIDQPVFFSELAEVKGRSTLAESLFHINNVKSVFFGSD 60
Query: 60 FITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K +W+ ++P +L +IM+HFISG P+ + + K+D+ I+ S +
Sbjct: 61 FITVTKHAGGNWQVIKPEILMVIMDHFISGFPVFNE----NTKIDNEKHN--IDMLSEIE 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E ++ RVRP V +DGGDI++KG+ G+V L++RGAC GCPS++ TLK G+ ++L H
Sbjct: 115 KQIIETIETRVRPFVTQDGGDIIYKGFESGVVKLALRGACLGCPSSTITLKNGIESMLRH 174
Query: 179 FVPEVKDIRTV 189
F+PEV++++ V
Sbjct: 175 FIPEVQEVQAV 185
>gi|198470316|ref|XP_002133420.1| GA22888 [Drosophila pseudoobscura pseudoobscura]
gi|263504850|sp|B5DKJ8|NFU1_DROPS RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|198145392|gb|EDY72048.1| GA22888 [Drosophila pseudoobscura pseudoobscura]
Length = 286
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 120/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G + F + A SPLA +F + G+ +V+FG D
Sbjct: 67 MFIQTQDTPNPDSLKFLPGVEVLGKGNTYDFPSGTAAHCSPLAKLLFRVEGVRAVFFGSD 126
Query: 60 FITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K++ +W ++P V +IM+ F SG PI+H + ++ D V
Sbjct: 127 FITISKEESAEWSLIKPEVFAVIMDFFASGLPILHEA-------RPNADTEILDDDDETV 179
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF Y +G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 180 MMIKELLDTRIRPTVQEDGGDIVFISYENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 239
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 240 YIPEVESVEQV 250
>gi|195169040|ref|XP_002025336.1| GL13432 [Drosophila persimilis]
gi|263504975|sp|B4H303|NFU1_DROPE RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194108792|gb|EDW30835.1| GL13432 [Drosophila persimilis]
Length = 282
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 120/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G + F + A SPLA +F + G+ +V+FG D
Sbjct: 63 MFIQTQDTPNPDSLKFLPGVEVLGKGNTYDFPSGTAAHCSPLAKLLFRVEGVRAVFFGSD 122
Query: 60 FITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K++ +W ++P V +IM+ F SG PI+H + ++ D V
Sbjct: 123 FITISKEESAEWSLIKPEVFAVIMDFFASGLPILHEARPN-------ADTEILDDDDETV 175
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF Y +G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 176 MMIKELLDTRIRPTVQEDGGDIVFISYENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 235
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 236 YIPEVESVEQV 246
>gi|146326964|gb|AAI41716.1| Lpd-8 protein [Xenopus laevis]
Length = 250
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 122/193 (63%), Gaps = 13/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP ++KFIPG+ VL + F N A SPLA +F I G+ SV+FG DF
Sbjct: 54 MFIQTQDTPNPNSVKFIPGRAVLDARTMDFPNPASAFCSPLARHLFRIEGVKSVFFGPDF 113
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD--FIESDSA 116
IT+ K + DW ++P + IM+ F +G P++ D+ GD E +
Sbjct: 114 ITITKNGEDMDWNLIKPDIFATIMDFFSTGLPVVT---------DEAPRGDPAASEEEDE 164
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
VV IKE+LD R+RP V DGGD+++KG++DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 165 VVAMIKELLDTRIRPTVQEDGGDVLYKGFQDGIVQLKLQGSCTSCPSSIITLKSGIQNML 224
Query: 177 NHFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 225 QFYIPEVEGVEQV 237
>gi|225464130|ref|XP_002264979.1| PREDICTED: similar to NFU4 (NFU domain protein 4) [Vitis vinifera]
Length = 271
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 120/189 (63%), Gaps = 8/189 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNPA+L F PG+ V+ G+ F N++ A SPLA ++ I GI V+FG DF
Sbjct: 70 MFIQTQSTPNPASLMFYPGKPVMEVGSADFPNSRSAMSSPLAKSLYGIDGITRVFFGSDF 129
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K D W+ ++P + IM+ + SG P+ + +D E DS V
Sbjct: 130 ITVTKSDDASWDFIKPEIFAAIMDFYSSGKPLFLDSNTA-AAMDTA----IHEDDSETVA 184
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 185 MIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSSSVTLKSGIENMLM 244
Query: 178 HFVPEVKDI 186
H+VPEVK +
Sbjct: 245 HYVPEVKGV 253
>gi|114108171|gb|AAI23134.1| Lpd-8 protein [Xenopus laevis]
Length = 249
Score = 169 bits (428), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 122/193 (63%), Gaps = 13/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP ++KFIPG+ VL + F N A SPLA +F I G+ SV+FG DF
Sbjct: 53 MFIQTQDTPNPNSVKFIPGRAVLDARTMDFPNPASAFCSPLARHLFRIEGVKSVFFGPDF 112
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD--FIESDSA 116
IT+ K + DW ++P + IM+ F +G P++ D+ GD E +
Sbjct: 113 ITITKNGEDMDWNLIKPDIFATIMDFFSTGLPVVT---------DEAPRGDPAASEEEDE 163
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
VV IKE+LD R+RP V DGGD+++KG++DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 164 VVAMIKELLDTRIRPTVQEDGGDVLYKGFQDGIVQLKLQGSCTSCPSSIITLKSGIQNML 223
Query: 177 NHFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 224 QFYIPEVEGVEQV 236
>gi|15604511|ref|NP_221029.1| hypothetical protein RP667 [Rickettsia prowazekii str. Madrid E]
gi|3861205|emb|CAA15105.1| unknown [Rickettsia prowazekii]
gi|292572295|gb|ADE30210.1| NifU-like protein [Rickettsia prowazekii Rp22]
Length = 190
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 128/191 (67%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTE+TPNP +KF PGQ + V+ + FS E + S LA +F I + SV+ G D
Sbjct: 1 MFIQTEETPNPDAIKFFPGQEISVDQPVFFSELAEVKGRSALAESLFHINNVKSVFLGSD 60
Query: 60 FITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K +W+ ++P +L +IM+HFISG P+ + + K+DD ++ S +
Sbjct: 61 FITVTKQARGNWQVIKPEILMVIMDHFISGFPVFNE----NTKIDDEKHN--LDMLSEIE 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E ++ RVRP V +DGGDI++KG+ G+V L++RGAC GCPS++ TLK G+ ++L H
Sbjct: 115 KQIIETIETRVRPFVTQDGGDIIYKGFESGVVKLALRGACLGCPSSTITLKNGIESMLKH 174
Query: 179 FVPEVKDIRTV 189
F+PEV++++ V
Sbjct: 175 FIPEVQEVKAV 185
>gi|296448206|ref|ZP_06890103.1| Scaffold protein Nfu/NifU [Methylosinus trichosporium OB3b]
gi|296254290|gb|EFH01420.1| Scaffold protein Nfu/NifU [Methylosinus trichosporium OB3b]
Length = 183
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 135/190 (71%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP+TLKF+PG+ VL GA F +A+ A SPLA + +I G+ +V FG DF
Sbjct: 1 MFIQTESTPNPSTLKFLPGRPVLAAGAREFRDAQAAAASPLAGALLAINGVEAVMFGPDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE-SDSAVVQ 119
++V K +W HL+P VLG IMEHF SG PI+ + G + +F + +D+ +V
Sbjct: 61 VSVTKADAEWAHLKPAVLGTIMEHFTSGAPIVLDEG-------EAAPAEFFDPADAELVA 113
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+KE+L RV PAVARDGGDI F+G+RDGIV+L+M+G+CSGCPS+S TLK GV N+L H+
Sbjct: 114 TLKELLVTRVTPAVARDGGDIAFRGFRDGIVYLAMKGSCSGCPSSSATLKNGVENLLRHY 173
Query: 180 VPEVKDIRTV 189
VP+V+ + V
Sbjct: 174 VPQVRSVEQV 183
>gi|34500321|gb|AAQ73785.1| NifU-like protein HIRIP5 [Mus musculus]
Length = 245
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 121/191 (63%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 47 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 106
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ + GS E D VV
Sbjct: 107 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEET--PPPPGEAGS----EEDDEVV 160
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 161 AMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQF 220
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 221 YIPEVEGVEQV 231
>gi|328862177|gb|EGG11278.1| hypothetical protein MELLADRAFT_41822 [Melampsora larici-populina
98AG31]
Length = 292
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 125/194 (64%), Gaps = 8/194 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--VEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+FIQTE TPNP LKFIPG V+ G + F + SPLA +F IPGI S++FG
Sbjct: 74 IFIQTETTPNPDALKFIPGVPVMGKSNGTLEFLSNSNPNSSPLAKSLFKIPGIKSLFFGP 133
Query: 59 DFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
DFI++ KD+ +W ++P + ++ME F SG PI+ + G+ +D +ESDS V
Sbjct: 134 DFISINKDEETNWSIIKPEIYSLMMEFFSSGQPILTDESEGNQGPEDT---RVLESDSEV 190
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANI 175
+ IKE+LD RVRP++ DGGD+ +KG+ + G+V L ++G+C GC S++ TLK G+ +
Sbjct: 191 IAMIKELLDTRVRPSIQEDGGDLEYKGFDEETGVVTLMLKGSCRGCDSSTVTLKSGIERM 250
Query: 176 LNHFVPEVKDIRTV 189
L H++PEV+ + V
Sbjct: 251 LMHYIPEVQAVEQV 264
>gi|148666781|gb|EDK99197.1| mCG130855, isoform CRA_a [Mus musculus]
Length = 255
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 121/191 (63%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 57 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 116
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ + GS E D VV
Sbjct: 117 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEET--PPPPGEAGS----EEDDEVV 170
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 171 AMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQF 230
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 231 YIPEVEGVEQV 241
>gi|282154801|ref|NP_064429.2| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2
precursor [Mus musculus]
gi|205830867|sp|Q9QZ23|NFU1_MOUSE RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; AltName: Full=HIRA-interacting protein 5;
Short=mHIRIP5; Flags: Precursor
gi|12834577|dbj|BAB22965.1| unnamed protein product [Mus musculus]
Length = 255
Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 121/191 (63%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 57 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 116
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ + GS E D VV
Sbjct: 117 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEET--PPPPGEAGS----EEDDEVV 170
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 171 AMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQF 230
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 231 YIPEVEGVEQV 241
>gi|195568040|ref|XP_002107563.1| GD15490 [Drosophila simulans]
gi|263505455|sp|B4R3T1|NFU1_DROSI RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194204973|gb|EDX18549.1| GD15490 [Drosophila simulans]
Length = 283
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 119/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G + F + A SPLA +F + G+ V+FG D
Sbjct: 67 MFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPHGTTAHSSPLAKLLFRVEGVKGVFFGAD 126
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K + +W ++P V +IM+ F SG P++++ + +E D V
Sbjct: 127 FITISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDA-------QPNADTEILEDDDETV 179
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF GY G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 180 MMIKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 239
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 240 YIPEVESVEQV 250
>gi|57239492|ref|YP_180628.1| hypothetical protein Erum7660 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579471|ref|YP_197683.1| hypothetical protein ERWE_CDS_08070 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161571|emb|CAH58499.1| putative NifU-related protein [Ehrlichia ruminantium str.
Welgevonden]
gi|58418097|emb|CAI27301.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 185
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 132/191 (69%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAI-HFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ EDTPNP TLKF+PG + + G I F+++ AE SP A +F I I SV+FG D
Sbjct: 1 MFIQIEDTPNPNTLKFMPG-IPVNNGKIGEFTDSITAESSPFAKALFEIEHIVSVFFGGD 59
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K +W+ L+P +L +IM+ F++ +P N + + +D+ F D +V
Sbjct: 60 FISVTKSSDIEWDVLKPEILTVIMD-FLTLNP---NDSVENNDEEDLQEF-FDAKDEEIV 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+IKE++D+ ++PAVA+DGGDI FKGY +GIVF+ +RGACSGCPSAS TLK G+ N+L +
Sbjct: 115 SKIKELIDDYIKPAVAQDGGDIKFKGYSNGIVFVKLRGACSGCPSASITLKEGIYNMLTY 174
Query: 179 FVPEVKDIRTV 189
++P+++ + +V
Sbjct: 175 YLPDIQSVESV 185
>gi|308492754|ref|XP_003108567.1| CRE-LPD-8 protein [Caenorhabditis remanei]
gi|308248307|gb|EFO92259.1| CRE-LPD-8 protein [Caenorhabditis remanei]
Length = 223
Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 121/190 (63%), Gaps = 12/190 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA--IHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
M+IQ ++TPNP +LKF+PGQ +L + + F++A A+ SPLA ++ + G+ V+FG
Sbjct: 16 MYIQVQETPNPLSLKFLPGQQLLPDASKTYDFNSAAAAKQSPLAVKLLRVDGVKRVFFGE 75
Query: 59 DFITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
DF+TV K + DW LRP + I +H +G P+I+ D G+ D+
Sbjct: 76 DFVTVTKADEHVDWALLRPEIFSTIADHLQTGKPVINEVAATD--------GEAEVEDNE 127
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
VV IKE+L+ R+RP V DGGDI + G+ DG+V L M+G+C+GCPS+ TLK G+ N+L
Sbjct: 128 VVMMIKEILETRIRPMVQEDGGDITYVGFDDGVVKLKMQGSCTGCPSSGVTLKNGIENML 187
Query: 177 NHFVPEVKDI 186
+VPEVK++
Sbjct: 188 TFYVPEVKEV 197
>gi|165933598|ref|YP_001650387.1| mitochondrial-type Fe-S cluster assembly protein NFU [Rickettsia
rickettsii str. Iowa]
gi|165908685|gb|ABY72981.1| mitochondrial-type Fe-S cluster assembly protein NFU [Rickettsia
rickettsii str. Iowa]
Length = 190
Score = 167 bits (424), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 129/191 (67%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQT DTPNP + F PGQ + + + FS E + S LA +F I + SV+FG D
Sbjct: 1 MFIQTADTPNPDAITFFPGQKISSDQPVFFSELAEVKGRSKLAESLFYINNVKSVFFGSD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ ++P +L +IM+HF+SG P+ + K D++ ++ S +
Sbjct: 61 FITVTKQAEGNWQVIKPEILMVIMDHFVSGLPVFEE----NTKADNVNHN--LDGLSEIE 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E+++ RVRP+VA+DGGDI++KG+ +G+V L++RGAC GCPS++ TL+ G+ ++L H
Sbjct: 115 KQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSSTITLRNGIESMLKH 174
Query: 179 FVPEVKDIRTV 189
FVPEV+++ V
Sbjct: 175 FVPEVQEVEAV 185
>gi|118403546|ref|NP_001072356.1| NFU1 iron-sulfur cluster scaffold homolog [Xenopus (Silurana)
tropicalis]
gi|111307911|gb|AAI21453.1| HIRA interacting protein 5 [Xenopus (Silurana) tropicalis]
Length = 199
Score = 167 bits (424), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 122/193 (63%), Gaps = 13/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP ++KFIPG+ VL + F + A SPLA +F I G+ SV+ G DF
Sbjct: 1 MFIQTQDTPNPNSVKFIPGRAVLDARTMDFPSPASAFCSPLARHLFRIDGVKSVFLGPDF 60
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI--ESDSA 116
IT+ K ++ DW ++P + IM+ F SG P++ +D GD E +
Sbjct: 61 ITITKNSEELDWNLIKPDIYATIMDFFASGLPVVT---------EDAPRGDAAASEEEDE 111
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
VV IKE+LD R+RP V DGGD+++KG++DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 112 VVAMIKELLDTRIRPTVQEDGGDVLYKGFQDGIVQLKLQGSCTSCPSSIITLKSGIQNML 171
Query: 177 NHFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 172 QFYIPEVEGVEQV 184
>gi|157828872|ref|YP_001495114.1| hypothetical protein A1G_05615 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|157801353|gb|ABV76606.1| hypothetical protein A1G_05615 [Rickettsia rickettsii str. 'Sheila
Smith']
Length = 190
Score = 167 bits (424), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 129/191 (67%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQT DTPNP + F PGQ + + + FS E + S LA +F I + SV+FG D
Sbjct: 1 MFIQTADTPNPDAITFFPGQEISSDQPVFFSELAEVKGRSKLAESLFYINNVKSVFFGSD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ ++P +L +IM+HF+SG P+ + K D++ ++ S +
Sbjct: 61 FITVTKQAEGNWQVIKPEILMVIMDHFVSGLPVFEE----NTKADNVNHN--LDGLSEIE 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E+++ RVRP+VA+DGGDI++KG+ +G+V L++RGAC GCPS++ TL+ G+ ++L H
Sbjct: 115 KQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSSTITLRNGIESMLKH 174
Query: 179 FVPEVKDIRTV 189
FVPEV+++ V
Sbjct: 175 FVPEVQEVEAV 185
>gi|239047306|ref|NP_001131382.2| hypothetical protein LOC100192708 [Zea mays]
gi|238908578|gb|ACF79773.2| unknown [Zea mays]
Length = 268
Score = 167 bits (424), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 120/189 (63%), Gaps = 8/189 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F PG+ V+ G+ F NA+ A SPLA F+I G+ V+FG DF
Sbjct: 71 MFIQTQSTPNPQSLMFYPGKPVMEIGSSDFPNARTAMTSPLAKSPFAIDGVTRVFFGSDF 130
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K ++ W+ L+P V IM+ + SG P+ + +D E DS +V
Sbjct: 131 VTVTKSEETSWDCLKPEVFAAIMDFYSSGQPLFLDSNAA-ASMDTA----IHEDDSEIVA 185
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ G V L M+GACSGCPS+S TLK G+ N+L
Sbjct: 186 MIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLKMQGACSGCPSSSVTLKSGIENMLM 245
Query: 178 HFVPEVKDI 186
H+VPEVK +
Sbjct: 246 HYVPEVKGV 254
>gi|255568026|ref|XP_002524990.1| HIRA-interacting protein, putative [Ricinus communis]
gi|223535734|gb|EEF37397.1| HIRA-interacting protein, putative [Ricinus communis]
Length = 271
Score = 167 bits (423), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 119/189 (62%), Gaps = 8/189 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP++L F PG+ V+ G++ F NA+ A SPLA ++ I G V+FG DF
Sbjct: 70 MFIQTQSTPNPSSLMFYPGKPVMEVGSVDFPNARAALNSPLAKSLYGIDGTTRVFFGSDF 129
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K D W+ L+P + IM+ + SG P+ + + K + DS V
Sbjct: 130 ITVTKSDDVSWDLLKPEIFAAIMDFYSSGQPLFLDSEIAASK-----DTAIHKDDSETVA 184
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 185 MIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSSSVTLKSGIENMLM 244
Query: 178 HFVPEVKDI 186
H+V EVK +
Sbjct: 245 HYVSEVKGV 253
>gi|156389173|ref|XP_001634866.1| predicted protein [Nematostella vectensis]
gi|156221954|gb|EDO42803.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 167 bits (423), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 119/191 (62%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQ ++TPNP +LKF+PG +VL G ++F ++ A SPLA +F I G+ V FG +F
Sbjct: 1 MFIQVQETPNPNSLKFVPGVLVLESGTVNFDSSSSAHRSPLARNLFRINGVKGVMFGPEF 60
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K ++ W L+P + IM+ F S PI+ + D GS + D V
Sbjct: 61 ITVTKSDEEVQWSVLKPEIFATIMDFFSSNLPIMTE----EEPPQDTGSCN----DDDTV 112
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDI+FKG++DGIV L M+GAC+ CPS+ TLK G+ N++
Sbjct: 113 LMIKELLDTRIRPTVQEDGGDIIFKGFKDGIVKLKMQGACASCPSSIVTLKNGIENMMQF 172
Query: 179 FVPEVKDIRTV 189
++PEV + V
Sbjct: 173 YIPEVVSVEQV 183
>gi|302769472|ref|XP_002968155.1| hypothetical protein SELMODRAFT_67451 [Selaginella moellendorffii]
gi|300163799|gb|EFJ30409.1| hypothetical protein SELMODRAFT_67451 [Selaginella moellendorffii]
Length = 187
Score = 167 bits (423), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 121/187 (64%), Gaps = 8/187 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+FIQ + TPNPA+L F PG+ V+ G+ F NA+ A SPLA +F I G+ V+FG DF
Sbjct: 6 LFIQVQTTPNPASLIFSPGKPVMEIGSSDFPNARTAMKSPLAKSLFGIDGVTRVFFGSDF 65
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+ L+P V IM+ + SG P+ ++ K + GD D VV
Sbjct: 66 VTVTKSDDTEWDVLKPEVFAAIMDFYASGQPLFYSAQAAAPKDTAIEEGD----DETVVM 121
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS++ TLK G+ N+L
Sbjct: 122 -IKELLETRIRPAVKDDGGDIEYRGFDRESGIVELKMQGACSGCPSSAVTLKSGIENMLM 180
Query: 178 HFVPEVK 184
H+VPEVK
Sbjct: 181 HYVPEVK 187
>gi|302773942|ref|XP_002970388.1| hypothetical protein SELMODRAFT_93100 [Selaginella moellendorffii]
gi|300161904|gb|EFJ28518.1| hypothetical protein SELMODRAFT_93100 [Selaginella moellendorffii]
Length = 210
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 122/187 (65%), Gaps = 8/187 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+FIQ + TPNPA+L F PG+ V+ G+ F NA+ A SPLA +F I G+ V+FG DF
Sbjct: 10 LFIQVQTTPNPASLIFSPGKPVMEIGSSDFPNARTAMKSPLAKSLFGIDGVTRVFFGSDF 69
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+ L+P V IM+ + SG P+ ++ + K + GD D VV
Sbjct: 70 VTVTKSDDTEWDVLKPEVFAAIMDFYASGQPLFYSAQVEAPKDTAIEEGD----DETVVM 125
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS++ TLK G+ N+L
Sbjct: 126 -IKELLETRIRPAVKDDGGDIEYRGFDRESGIVELKMQGACSGCPSSAVTLKSGIENMLM 184
Query: 178 HFVPEVK 184
H+VPEVK
Sbjct: 185 HYVPEVK 191
>gi|18402817|ref|NP_566673.1| NFU4; structural molecule [Arabidopsis thaliana]
gi|75273382|sp|Q9LIG6|NIFU4_ARATH RecName: Full=NifU-like protein 4, mitochondrial; Short=AtNfu-III;
Short=AtNfu4; Flags: Precursor
gi|13899085|gb|AAK48964.1|AF370537_1 Unknown protein [Arabidopsis thaliana]
gi|9294004|dbj|BAB01907.1| unnamed protein product [Arabidopsis thaliana]
gi|18377516|gb|AAL66924.1| unknown protein [Arabidopsis thaliana]
gi|28207822|emb|CAD55561.1| NFU4 protein [Arabidopsis thaliana]
gi|332642927|gb|AEE76448.1| NifU-like protein 4 [Arabidopsis thaliana]
Length = 283
Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 118/190 (62%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP++L F PG+ V+ G+ F N + A SPLA I+SI G+ V+FG DF
Sbjct: 80 MFIQTQSTPNPSSLMFYPGKPVMEVGSADFPNVRSALGSPLAKSIYSIDGVVRVFFGSDF 139
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D W+ L+P + +M+ + SG P+ + K + E DS V
Sbjct: 140 VTVTKSDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQAAAAKDTAIS-----EDDSETVA 194
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI + G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 195 MIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKSGIENMLM 254
Query: 178 HFVPEVKDIR 187
H+V EVK +
Sbjct: 255 HYVSEVKGVE 264
>gi|58617525|ref|YP_196724.1| hypothetical protein ERGA_CDS_07980 [Ehrlichia ruminantium str.
Gardel]
gi|58417137|emb|CAI28250.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
Length = 185
Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 131/191 (68%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAI-HFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ EDTPNP TLKF+PG + + G I F+++ AE SP A +F I I V+FG D
Sbjct: 1 MFIQIEDTPNPNTLKFMPG-IPVNNGKIGEFTDSITAESSPFAKALFEIEHIVGVFFGGD 59
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F++V K +W+ L+P +L +IM+ F++ +P N + + +D+ F D +V
Sbjct: 60 FVSVTKSSDIEWDVLKPEILTVIMD-FLTLNP---NDSVENHDEEDLQEF-FDAKDEEIV 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+IKE++D+ ++PAVA+DGGDI FKGY +GIVF+ +RGACSGCPSAS TLK G+ N+L +
Sbjct: 115 SKIKELIDDYIKPAVAQDGGDIKFKGYSNGIVFVKLRGACSGCPSASITLKEGIYNMLTY 174
Query: 179 FVPEVKDIRTV 189
++P+++ + +V
Sbjct: 175 YLPDIQSVESV 185
>gi|167520450|ref|XP_001744564.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776895|gb|EDQ90513.1| predicted protein [Monosiga brevicollis MX1]
Length = 209
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 119/190 (62%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT DTPNP +L F PG +L + ++A A SPLA +F + G+ SV+ DF
Sbjct: 1 MFIQTRDTPNPNSLMFYPGVDILPGSTLELTSAAAAHQSPLARALFRVDGVKSVFLASDF 60
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+T+ KD+ +W L+P + +M+ F S P++ + + D S E D +V
Sbjct: 61 VTINKDEAAEWSTLKPNIYATMMDFFASNQPVVLDSY--EAPTDTAVS----EDDDEIVA 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+LD+R+RPAV DGGDI+F+G+ DGIV L + GAC+GCPS+ TLK GV N+L H+
Sbjct: 115 MIKELLDSRIRPAVQEDGGDILFQGFVDGIVQLRLSGACTGCPSSIFTLKNGVENMLMHY 174
Query: 180 VPEVKDIRTV 189
+PEV+ + V
Sbjct: 175 IPEVEGVEQV 184
>gi|332028326|gb|EGI68373.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Acromyrmex echinatior]
Length = 211
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 119/188 (63%), Gaps = 16/188 (8%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKFIPG VL EG F +AK+A SPLA +F I G+ +++FG D
Sbjct: 1 MFIQTQDTPNPNSLKFIPGVSVLGEGCTKDFPSAKDAYCSPLAKMLFRIEGVKAIFFGPD 60
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGG--LGDMKLDDMGSGDFIESDS 115
FITV K + +W+ L+P + IM+ F SG P++ D +++ D
Sbjct: 61 FITVTKVDEDVEWKLLKPEIFATIMDFFASGLPVMDEASQPAADTQIN--------AEDD 112
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
VVQ IKE+LD R+RP V DGGDI G+ +GIV L M+G+C+ CPS+ TL+ GV N+
Sbjct: 113 EVVQMIKELLDTRIRPTVQEDGGDI---GFEEGIVKLKMQGSCTNCPSSVVTLRNGVQNM 169
Query: 176 LNHFVPEV 183
+ ++PEV
Sbjct: 170 MQFYIPEV 177
>gi|67458659|ref|YP_246283.1| NifU-like domain-containing protein [Rickettsia felis URRWXCal2]
gi|67004192|gb|AAY61118.1| NifU-like domain [Rickettsia felis URRWXCal2]
Length = 190
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 123/181 (67%), Gaps = 8/181 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTEDTPNP +KF PGQ + E + FS+ E + S LA +F I + SV+FG D
Sbjct: 1 MFIQTEDTPNPDAIKFFPGQEISSEQPVFFSDISEVKGRSKLAESLFYINNVKSVFFGSD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ ++P VL +IM+HF+SG P+ K D++ ++ S +
Sbjct: 61 FITVTKQAESNWQVIKPEVLMVIMDHFVSGFPVFEES----TKADNVNHN--LDGLSEIE 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E+++ RVRP+VA+DGGDI++KG+ +G+V L++RGAC GCPS++ TLK G+ ++L H
Sbjct: 115 KQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSSTITLKNGIESMLKH 174
Query: 179 F 179
F
Sbjct: 175 F 175
>gi|291225596|ref|XP_002732785.1| PREDICTED: GM13534-like [Saccoglossus kowalevskii]
Length = 275
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 117/193 (60%), Gaps = 13/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT +TPNP +LKFIPG VL G + F A+ A SPLA ++F I G+ SV+ G DF
Sbjct: 65 MFIQTHETPNPNSLKFIPGVPVLGSGTMDFPTARVAHGSPLARQLFRIDGVKSVFLGPDF 124
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD--FIESDSA 116
IT+ K D +W+ ++P V +M+ F +G PI+ D+ S D D
Sbjct: 125 ITITKHDDDSEWKIIKPEVYAAVMDFFATGLPIL---------TDEQPSADTEIHPDDDE 175
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V IKE+LD R+RP V DGGDIV+ G+ GIV L M+G+C+ CPS+ TLK GV N+L
Sbjct: 176 TVAMIKELLDTRIRPTVQEDGGDIVYMGFEKGIVKLKMQGSCTSCPSSVVTLKSGVQNML 235
Query: 177 NHFVPEVKDIRTV 189
+VPEV + V
Sbjct: 236 QFYVPEVLSVEQV 248
>gi|239799267|dbj|BAH70563.1| ACYPI005854 [Acyrthosiphon pisum]
Length = 254
Score = 164 bits (415), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 121/193 (62%), Gaps = 12/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP ++KF+PG VL +G + F NA A SPLA +F I G+ SV+FG D
Sbjct: 43 MFIQTQDTPNPNSVKFLPGVQVLEKGHTMDFPNATAAYCSPLAKVLFRIEGVKSVFFGSD 102
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGG-LGDMKLDDMGSGDFIESDSA 116
+IT+ K D +W L+P + IM+ F SG PI+ + D ++ E D+
Sbjct: 103 YITLTKTDDDIEWMVLKPEIYATIMDFFASGLPILTDAKPTSDTQIH--------EDDNE 154
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V IKE+LD+R+RP V DGGDI+F GY GIV L ++G+C+ CPS+ TLK GV N+L
Sbjct: 155 TVMMIKELLDSRIRPTVQEDGGDILFIGYDAGIVKLKLQGSCTSCPSSVVTLKGGVQNML 214
Query: 177 NHFVPEVKDIRTV 189
++PEV + V
Sbjct: 215 QFYIPEVIAVEQV 227
>gi|254797154|ref|YP_003081992.1| hira-interacting protein 5 [Neorickettsia risticii str. Illinois]
gi|254590399|gb|ACT69761.1| hira-interacting protein 5 [Neorickettsia risticii str. Illinois]
Length = 180
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 122/190 (64%), Gaps = 11/190 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF PG +L G F A +A + L ++ I G++ V G DF
Sbjct: 1 MFIQTEHTPNPNVLKFFPGVNILDSGIADFVTASDASGNKLPEMLWEIQGVSGVMLGVDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
++V K + +W+ L+P + +++E+F +G + + + +E V +
Sbjct: 61 VSVSKTEDAEWDVLKPQIFSVLVEYFTTGSDFVR----------PVTEDEEVECTDEVSK 110
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+I+E++D +VRP+V DGG++VFKGY+DGIV+L ++GAC+GCPSAS TLK G+ N+L ++
Sbjct: 111 KIREIIDTKVRPSVIEDGGNVVFKGYKDGIVYLKLQGACAGCPSASVTLKDGIENLLQYY 170
Query: 180 VPEVKDIRTV 189
VPEV++++ V
Sbjct: 171 VPEVREVQQV 180
>gi|299755866|ref|XP_001828936.2| NifU-like protein c [Coprinopsis cinerea okayama7#130]
gi|298411416|gb|EAU92943.2| NifU-like protein c [Coprinopsis cinerea okayama7#130]
Length = 291
Score = 164 bits (414), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 122/194 (62%), Gaps = 9/194 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPN +LKFIPG V+ EG+ F + + A SPLA R+ I GI V++G DF
Sbjct: 66 MFIQTESTPNEDSLKFIPGVPVMEEGSAEFLDTRSALASPLALRLMGIEGITGVFYGPDF 125
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD--FIESDSAV 117
+TV K + W ++P V ++ME F SG P+ + + + G D +++DS
Sbjct: 126 VTVSKSSDHPWAVVKPEVYALLMEFFSSGQPLFRS----EEDREAAGPQDTRILDTDSET 181
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE+L+ RVRPA+ DGGDI ++G+ DGIV + ++G+C GC S+S TLK G+ +
Sbjct: 182 VAMIKELLETRVRPAIMEDGGDIEYRGFDENDGIVRVKLKGSCRGCESSSVTLKSGIERM 241
Query: 176 LNHFVPEVKDIRTV 189
L H+VPEVK + +
Sbjct: 242 LMHYVPEVKGVEQI 255
>gi|225707158|gb|ACO09425.1| HIRA-interacting protein 5 [Osmerus mordax]
Length = 268
Score = 163 bits (413), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+ IQT+DTPNP +LKF+PG+ VL G + F + AE S LA +F I G+ SV+FG DF
Sbjct: 64 LSIQTQDTPNPRSLKFLPGKPVLGTGTLDFPTPQNAECSSLAKDLFEIEGVKSVFFGPDF 123
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K D +W +++ + I + F SG PI G+ + E D +V
Sbjct: 124 ITVTKADDDVEWTNIKRHAVEAITKFFDSGAPI--TTGVSHHE------SSHSEDDDEIV 175
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++FKG+ DG V L + G+C+GCPS+S TL+ G+ N+L
Sbjct: 176 SIIKELLDTRIRPTVQEDGGDVIFKGFEDGTVKLKLVGSCTGCPSSSVTLRNGIQNMLQF 235
Query: 179 FVPEVKDIRTV 189
++PEV D+ V
Sbjct: 236 YIPEVDDVEQV 246
>gi|209484091|gb|ACI47520.1| iron-sulfer cluster scaffold protein NFU4 [Eucalyptus grandis]
Length = 243
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 118/190 (62%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F PG+ V+ G+ F NA+ + S LA +F I G+ V++G DF
Sbjct: 40 MFIQTQSTPNPMSLMFYPGKPVMEVGSADFPNARTSMNSALARALFGIDGVTRVFYGSDF 99
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D W+ L+P + IM+ + SG P+ L M + E DS V
Sbjct: 100 VTVTKSDDASWDLLKPEIFAAIMDFYSSGQPLF----LDSQTASAMDTA-IHEDDSETVA 154
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 155 MIKELLETRIRPAVQDDGGDIEYRGFDLDTGIVKLRMQGACSGCPSSSVTLKSGIENMLM 214
Query: 178 HFVPEVKDIR 187
H+VPEVK +
Sbjct: 215 HYVPEVKAVE 224
>gi|88658493|ref|YP_507026.1| NifU domain-containing protein [Ehrlichia chaffeensis str.
Arkansas]
gi|88599950|gb|ABD45419.1| NifU domain protein [Ehrlichia chaffeensis str. Arkansas]
Length = 186
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 128/190 (67%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQ +TPNP TLKF+PG + F+++ AE S LA+ +F I + SV+FG DF
Sbjct: 1 MFIQIGETPNPNTLKFMPGMPINNGKVSEFADSVAAEGSSLATALFKIEYVKSVFFGGDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
++V K D +W+ L+P +L +IME F++ + +L++ F E D +V
Sbjct: 61 VSVTKSDDIEWDVLKPEILTVIME-FLTLNSDNATESFDQEELEEF----FDEKDIEMVG 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE++DN V+PAV +DGGDI FKGY +GIVF+ +RGACSGCPSAS TLK G+ N+L+++
Sbjct: 116 KIKELIDNYVKPAVIQDGGDIKFKGYSNGIVFVKLRGACSGCPSASITLKEGIYNMLSYY 175
Query: 180 VPEVKDIRTV 189
+P+++ + ++
Sbjct: 176 IPDIQGVESI 185
>gi|88608783|ref|YP_506689.1| NifU-like domain-containing protein [Neorickettsia sennetsu str.
Miyayama]
gi|88600952|gb|ABD46420.1| NifU-like domain protein [Neorickettsia sennetsu str. Miyayama]
Length = 180
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 120/190 (63%), Gaps = 11/190 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF PG +L G F +A L ++ I G+ V G DF
Sbjct: 1 MFIQTEHTPNPNVLKFFPGVKILDSGTADFVTFSDASGHKLPEMLWEIQGVCGVMLGVDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
++V K + +W+ L+P + G+++E+F +G + + + +E V +
Sbjct: 61 VSVSKTEDAEWDVLKPQIFGVLVEYFTTGSDFVRP----------VTEDEEVECTDEVSK 110
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+I+E++D +VRP+V DGG+IVFKGY+DGIV+L ++GAC+GCPSAS TLK G+ N+L ++
Sbjct: 111 KIQEIIDTKVRPSVIEDGGNIVFKGYKDGIVYLKLQGACAGCPSASVTLKDGIENLLQYY 170
Query: 180 VPEVKDIRTV 189
+PEV++++ V
Sbjct: 171 IPEVREVQQV 180
>gi|296421235|ref|XP_002840171.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636384|emb|CAZ84362.1| unnamed protein product [Tuber melanosporum]
Length = 279
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 123/192 (64%), Gaps = 9/192 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG--AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+FIQTE TPNP+ LKFIPG VL EG + + + +E SPLA ++F++ G+ SV++G
Sbjct: 48 LFIQTESTPNPSALKFIPGLPVLPEGCQSQEYIDGRETHNSPLARKLFAVDGVRSVFYGP 107
Query: 59 DFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
DFIT+ KD+ W L+ V +I E SG+P+I G + + E DS V
Sbjct: 108 DFITITKDEETQWAFLKAEVYSLITEALNSGEPVILEGTM------ESSDTQREEGDSEV 161
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+L+ R+RPA+ DGGDI ++G+ +G+V L +RGAC C S++ TLK G+ ++L
Sbjct: 162 VGMIKELLETRIRPAIQEDGGDIEYRGFENGVVKLKLRGACRTCDSSTVTLKNGIESMLM 221
Query: 178 HFVPEVKDIRTV 189
H++ EV+ ++ +
Sbjct: 222 HYIEEVQSVQQI 233
>gi|85083846|ref|XP_957202.1| HIRA-interacting protein 5 [Neurospora crassa OR74A]
gi|18376131|emb|CAD21196.1| conserved hypothetical protein [Neurospora crassa]
gi|28918289|gb|EAA27966.1| HIRA-interacting protein 5 [Neurospora crassa OR74A]
Length = 326
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 125/203 (61%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEAEI----SPLASRIFSIPGIA 52
+FIQTE+TPNP +LKF+P Q V+ + I + NA+ SPLA+++ +I G+
Sbjct: 83 IFIQTENTPNPDSLKFLPNQKVIPDSIKTPFIEYMNARSTIAPPYPSPLAAQLMNIEGVT 142
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-----NGGLGDMKLDDMG 106
SV++G DFITV K +W H+RP V +I E SG I++ G + D+
Sbjct: 143 SVFYGTDFITVTKSADANWAHIRPEVFALITETITSGQTIVNVVERNEGEESTQESDEKD 202
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
S + E+DS VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++
Sbjct: 203 SLAYDENDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGIVKLKLRGACRTCDSSTV 262
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ +L H++ EV+ + V
Sbjct: 263 TLKNGIEGMLMHYIEEVQGVEQV 285
>gi|4680705|gb|AAD27742.1|AF132967_1 CGI-33 protein [Homo sapiens]
Length = 231
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 122/193 (63%), Gaps = 13/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD- 59
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+F +D
Sbjct: 35 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFF-WDQ 93
Query: 60 -FITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
FITV K+ + DW L+P + IM+ F SG P++ + + GS E D
Sbjct: 94 IFITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTE----ETPPGEAGS----EEDDE 145
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
VV IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 146 VVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML 205
Query: 177 NHFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 206 QFYIPEVEGVEQV 218
>gi|326430239|gb|EGD75809.1| HIRA-interacting protein 5 [Salpingoeca sp. ATCC 50818]
Length = 269
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 112/190 (58%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT DTPNP +L F PG V G F+ + SPLA + I G+ V+ G DF
Sbjct: 61 MFIQTRDTPNPNSLMFYPGTEVTGTGTADFARGGDTSKSPLARVLLRIDGVQGVFLGPDF 120
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
IT+ K++ DW ++P + G IM+ F S P++ G + + E D VV
Sbjct: 121 ITISKEEDVDWGVMKPHIFGSIMDFFASNQPVLLEGEEAN------AASTASEEDDEVVS 174
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+LD R+RPAV DGGDI+F + +GIV L + GAC GCPS+ TLK GV N+L H+
Sbjct: 175 MIKELLDTRIRPAVQDDGGDIIFMEFTNGIVKLKLSGACEGCPSSMYTLKQGVENMLMHY 234
Query: 180 VPEVKDIRTV 189
+PEV+ + V
Sbjct: 235 IPEVEGVEQV 244
>gi|42562675|ref|NP_175550.2| NFU5; ATP binding / structural molecule [Arabidopsis thaliana]
gi|75169527|sp|Q9C8J2|NIFU5_ARATH RecName: Full=NifU-like protein 5, mitochondrial; Short=AtNfu-I;
Short=AtNfu5; Flags: Precursor
gi|12325368|gb|AAG52627.1|AC024261_14 unknown protein; 90320-88994 [Arabidopsis thaliana]
gi|28207824|emb|CAD55562.1| NFU5 protein [Arabidopsis thaliana]
gi|105829764|gb|ABF74703.1| At1g51390 [Arabidopsis thaliana]
gi|110741134|dbj|BAE98660.1| hypothetical protein [Arabidopsis thaliana]
gi|332194540|gb|AEE32661.1| NifU-like protein 5 [Arabidopsis thaliana]
Length = 275
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 120/190 (63%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP++L F PG+ V+ G+ F N++ A SPLA IF+I G+ V++G DF
Sbjct: 75 MFIQTQSTPNPSSLMFSPGKPVMEIGSADFPNSRSAMSSPLAKAIFAIDGVVRVFYGSDF 134
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D W+ L+P + ++M+ + SG P+ + K + E DS V
Sbjct: 135 VTVTKSDDVTWDILKPDIFAVVMDFYSSGQPLFLDSQATAAKDTAIH-----EDDSETVA 189
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RP+V DGGDI + G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 190 MIKELLETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLM 249
Query: 178 HFVPEVKDIR 187
H+V EVK +
Sbjct: 250 HYVSEVKGVE 259
>gi|66808847|ref|XP_638146.1| NIF system FeS cluster assembly domain-containing protein
[Dictyostelium discoideum AX4]
gi|60466582|gb|EAL64634.1| NIF system FeS cluster assembly domain-containing protein
[Dictyostelium discoideum AX4]
Length = 314
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 121/185 (65%), Gaps = 6/185 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAI-HFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQTE TPNP +LKFIPG VL EG I FS+ K ++ SPLA+ +F + G+ V+F D
Sbjct: 98 IFIQTETTPNPDSLKFIPGVQVLEEGQIIDFSDFKTSQQSPLANNLFKLDGVNRVFFSSD 157
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K +++W L+P + G I++ + SG PI+ + LG++ D M + D VV
Sbjct: 158 FISVNKYPEHEWSILKPQIYGTIIDFYHSGLPILSDPSLGNINADTM----ILPEDDEVV 213
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+++ R+RP V DGG+I + G++DGIV + ++G CS C S+ TLK G+ +L H
Sbjct: 214 AMIKELIETRIRPTVLEDGGNIKYMGFKDGIVMVQLQGTCSSCSSSQATLKGGIERMLMH 273
Query: 179 FVPEV 183
++ EV
Sbjct: 274 WISEV 278
>gi|213512278|ref|NP_001134266.1| NFU1 iron-sulfur cluster scaffold homolog [Salmo salar]
gi|209731958|gb|ACI66848.1| NFU1 iron-sulfur cluster scaffold homolog [Salmo salar]
Length = 263
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+ IQT+DTPNP +LKFIPG+ VL G + F + AE S LA +F I G+ SV++G DF
Sbjct: 59 LSIQTQDTPNPRSLKFIPGKPVLGVGTLDFPSPSSAECSSLARDLFGIEGVKSVFYGPDF 118
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K D +W ++ + I + F SGDPI G+ + E D +V
Sbjct: 119 ITVTKADDDVEWTDIKHHAMDAITKFFDSGDPI--TTGVTHHE------SSHSEDDDEIV 170
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++FKG+ +G V L + G+C+GCPS++ TLK G+ N+L
Sbjct: 171 SMIKELLDTRIRPTVMEDGGDVIFKGFENGTVKLKLVGSCTGCPSSTVTLKNGIQNMLQF 230
Query: 179 FVPEVKDIRTV 189
++PEV D+ V
Sbjct: 231 YIPEVDDVEQV 241
>gi|269959159|ref|YP_003328948.1| NifU domain containing protein [Anaplasma centrale str. Israel]
gi|269848990|gb|ACZ49634.1| NifU domain containing protein [Anaplasma centrale str. Israel]
Length = 188
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 129/196 (65%), Gaps = 15/196 (7%)
Query: 1 MFIQTEDTPNPATLKFI-PGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E+TPNP L+F+ VE + FS+A A S LA +F I G++ V+FG D
Sbjct: 1 MFIQIENTPNPDALRFLLSADAGNVESGVEFSDADAARSSALARLLFDIQGVSKVFFGGD 60
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFIS-----GDPIIHNGGLGDMKLDDMGSGDFIES 113
FI+V K DW+ LRP +L ++M ++S P+ + G+ + F E
Sbjct: 61 FISVTKLPHADWDTLRPEIL-VVMTDYLSLRGADATPLPAHEDGGEQEF-------FDEV 112
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
D+ VV+R+KE++++ VRPAVA+DGGDI F+GY++G+VF+ +RGACSGCPSA+ TLK GV
Sbjct: 113 DTEVVKRVKELIEHYVRPAVAQDGGDIKFRGYKEGVVFVHLRGACSGCPSAAVTLKDGVY 172
Query: 174 NILNHFVPEVKDIRTV 189
+L+++VPEVK + +V
Sbjct: 173 GMLSYYVPEVKAVESV 188
>gi|254995338|ref|ZP_05277528.1| hypothetical protein AmarM_05319 [Anaplasma marginale str.
Mississippi]
gi|255003523|ref|ZP_05278487.1| hypothetical protein AmarPR_04754 [Anaplasma marginale str. Puerto
Rico]
gi|255004646|ref|ZP_05279447.1| hypothetical protein AmarV_05119 [Anaplasma marginale str.
Virginia]
Length = 189
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 130/194 (67%), Gaps = 10/194 (5%)
Query: 1 MFIQTEDTPNPATLKFI-PGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E TPNP L+F+ ++ + I FS+A A+ S LA +F I G++ V+FG D
Sbjct: 1 MFIQIEVTPNPDALRFLLSAEIGAIGSGIEFSDATTAQGSTLARLLFEIQGVSKVFFGGD 60
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNG--GLGDMKLDDMGSGDFIES-DS 115
F++V K DW+ LRP +L ++ ++F +HN ++ +F ++ DS
Sbjct: 61 FVSVTKLPDADWDTLRPEILVVMTDYFS-----LHNAYSDAAPQAHEESDEREFFDTKDS 115
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
VVQR+KE++++ VRPAVA+DGGDI F+GY++G+VF+ +RGACSGCPSA+ TLK GV +
Sbjct: 116 EVVQRVKELIEHYVRPAVAQDGGDIKFRGYKEGVVFVHLRGACSGCPSAAVTLKDGVYGM 175
Query: 176 LNHFVPEVKDIRTV 189
L+++VPEVK + +V
Sbjct: 176 LSYYVPEVKAVESV 189
>gi|145507614|ref|XP_001439762.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406957|emb|CAK72365.1| unnamed protein product [Paramecium tetraurelia]
Length = 207
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 122/193 (63%), Gaps = 11/193 (5%)
Query: 1 MFIQTEDTPNPATLKFIP-GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQ + TPNP LKFIP G+ V++ G FS +EA+ SPLA ++F I G+ V++G D
Sbjct: 10 LFIQAKPTPNPNFLKFIPDGKQVMLNGTYDFSRPREAKCSPLAQKLFMIDGVNRVFYGKD 69
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD---FIESDS 115
+I++ K ++ WE L+P + IMEH+ + G + +D E DS
Sbjct: 70 YISISKNEESKWEELKPQIFEQIMEHY----QLDAEGKEKQLIIDGYSENQDTQIKEEDS 125
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVA 173
+Q IKE++D R+RP V DGGDIVF+ + ++GIV L M+G+C+GCPS+S TLK G+
Sbjct: 126 EAIQLIKEIIDTRIRPTVQEDGGDIVFRDFDEQNGIVHLYMKGSCAGCPSSSITLKNGIE 185
Query: 174 NILNHFVPEVKDI 186
+L H+V EVK++
Sbjct: 186 RMLCHYVAEVKEV 198
>gi|56417173|ref|YP_154247.1| hypothetical protein AM1146 [Anaplasma marginale str. St. Maries]
gi|222475537|ref|YP_002563954.1| hypothetical protein AMF_868 [Anaplasma marginale str. Florida]
gi|56388405|gb|AAV86992.1| hypothetical protein AM1146 [Anaplasma marginale str. St. Maries]
gi|222419675|gb|ACM49698.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 194
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 130/194 (67%), Gaps = 10/194 (5%)
Query: 1 MFIQTEDTPNPATLKFI-PGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E TPNP L+F+ ++ + I FS+A A+ S LA +F I G++ V+FG D
Sbjct: 6 MFIQIEVTPNPDALRFLLSAEIGAIGSGIEFSDATTAQGSTLARLLFEIQGVSKVFFGGD 65
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNG--GLGDMKLDDMGSGDFIES-DS 115
F++V K DW+ LRP +L ++ ++F +HN ++ +F ++ DS
Sbjct: 66 FVSVTKLPDADWDTLRPEILVVMTDYFS-----LHNAYSDAAPQAHEESDEREFFDTKDS 120
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
VVQR+KE++++ VRPAVA+DGGDI F+GY++G+VF+ +RGACSGCPSA+ TLK GV +
Sbjct: 121 EVVQRVKELIEHYVRPAVAQDGGDIKFRGYKEGVVFVHLRGACSGCPSAAVTLKDGVYGM 180
Query: 176 LNHFVPEVKDIRTV 189
L+++VPEVK + +V
Sbjct: 181 LSYYVPEVKAVESV 194
>gi|225707504|gb|ACO09598.1| HIRA-interacting protein 5 [Osmerus mordax]
Length = 263
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 117/191 (61%), Gaps = 11/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+ IQT+DTPNP +LKF+PG+ VL G + F + AE S LA +F I G+ SV+FG DF
Sbjct: 60 LSIQTQDTPNPRSLKFLPGKPVLGTGTLDFPTPQNAECSSLAKDLFEIEGVKSVFFGPDF 119
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K D +W +++ + I + F SG PI G+ + D +V
Sbjct: 120 ITVTKADDDVEWTNIKRHAVEAITKFFDSGAPI--TTGVSHHESSH-------SEDDEIV 170
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++FKG+ DG V L + G+C+GCPS+S TL+ G+ N+L
Sbjct: 171 SIIKELLDTRIRPTVQEDGGDVIFKGFEDGTVKLKLVGSCTGCPSSSVTLRNGIQNMLQF 230
Query: 179 FVPEVKDIRTV 189
++PEV D+ V
Sbjct: 231 YIPEVDDVEQV 241
>gi|193599106|ref|XP_001949519.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Acyrthosiphon pisum]
Length = 254
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 120/193 (62%), Gaps = 12/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP ++KF+PG VL +G + F NA A SPLA +F I G+ SV+FG D
Sbjct: 43 MFIQTQDTPNPNSVKFLPGVQVLEKGHTMDFPNATAAYCSPLAKVLFRIEGVKSVFFGSD 102
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGG-LGDMKLDDMGSGDFIESDSA 116
+IT+ K D +W L+P + IM+ F SG PI+ + D ++ E D+
Sbjct: 103 YITLTKTDDDIEWMVLKPEIYATIMDFFASGLPILTDAKPTSDTQIH--------EDDNE 154
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V IKE+LD+R+RP V DGGDI+F GY GIV L ++G+C+ CPS+ TLK GV +L
Sbjct: 155 TVMMIKELLDSRIRPTVQEDGGDILFIGYDAGIVKLKLQGSCTSCPSSVVTLKGGVQYML 214
Query: 177 NHFVPEVKDIRTV 189
++PEV + V
Sbjct: 215 QFYIPEVIAVEQV 227
>gi|297847512|ref|XP_002891637.1| hypothetical protein ARALYDRAFT_892107 [Arabidopsis lyrata subsp.
lyrata]
gi|297337479|gb|EFH67896.1| hypothetical protein ARALYDRAFT_892107 [Arabidopsis lyrata subsp.
lyrata]
Length = 274
Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 119/190 (62%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+T+ TPNP++L F PG+ V+ G+ F N++ A SPLA IF+I G+ V+FG DF
Sbjct: 74 MFIETQSTPNPSSLMFNPGKPVMDIGSADFPNSRSAMGSPLAKAIFAIDGVVRVFFGSDF 133
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D W+ L+P + ++M+ + SG P+ + K E DS V
Sbjct: 134 VTVTKSDDVTWDILKPDIFAVVMDFYSSGQPLFLDSQATAAK-----DTAIHEDDSETVA 188
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RP+V DGGDI + G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 189 MIKELLETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLM 248
Query: 178 HFVPEVKDIR 187
H+V EVK +
Sbjct: 249 HYVSEVKGVE 258
>gi|307189950|gb|EFN74186.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Camponotus floridanus]
Length = 289
Score = 160 bits (405), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 119/186 (63%), Gaps = 12/186 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKFIPG VL EG F +AK+A S LA +F I G+ +++FG D
Sbjct: 81 MFIQTQDTPNPNSLKFIPGVPVLGEGCTKDFPSAKDAYCSSLAKMLFRIEGVKAIFFGPD 140
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FITV K + +W+ L+P + IM+ F SG PI++ D + D D +
Sbjct: 141 FITVTKLDEDVEWKLLKPEIFATIMDFFASGLPIMNETS--QPATDTQINAD----DDEI 194
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
VQ IKE+L+ R+RP V DGGDI G+ +GIV L M+G+C+ CPS++ TL+ GV N++
Sbjct: 195 VQMIKELLETRIRPTVQEDGGDI---GFEEGIVKLKMQGSCTNCPSSAVTLRNGVQNMMR 251
Query: 178 HFVPEV 183
++PEV
Sbjct: 252 FYIPEV 257
>gi|239946652|ref|ZP_04698405.1| type Fe-S cluster assembly protein NFU [Rickettsia endosymbiont of
Ixodes scapularis]
gi|241563470|ref|XP_002401717.1| conserved hypothetical protein [Ixodes scapularis]
gi|215501909|gb|EEC11403.1| conserved hypothetical protein [Ixodes scapularis]
gi|239920928|gb|EER20952.1| type Fe-S cluster assembly protein NFU [Rickettsia endosymbiont of
Ixodes scapularis]
Length = 190
Score = 160 bits (405), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 122/184 (66%), Gaps = 14/184 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTEDTPNP +KF PGQ ++ + + FS E + S LA +F I + SV+FG D
Sbjct: 1 MFIQTEDTPNPDAIKFFPGQEIISDQPVFFSELAEVKGRSKLAESLFHINNVKSVFFGSD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH---NGGLGDMKLDDMGSGDFIESDS 115
FITV K + +W+ ++P +L +IM+HF++G P+ G + LD + S
Sbjct: 61 FITVTKQAEGNWQVIKPEILMVIMDHFVAGFPVFEESTKAGNVNHSLDGL---------S 111
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ ++I E+++ RVRP+VA+DGGDI++KG+ +GIV L++RGAC GCPS++ TLK G+ ++
Sbjct: 112 EIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGIVKLALRGACLGCPSSTITLKNGIESM 171
Query: 176 LNHF 179
L HF
Sbjct: 172 LKHF 175
>gi|145505407|ref|XP_001438670.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405842|emb|CAK71273.1| unnamed protein product [Paramecium tetraurelia]
Length = 207
Score = 160 bits (405), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 124/193 (64%), Gaps = 11/193 (5%)
Query: 1 MFIQTEDTPNPATLKFIPG-QVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQ + TPNP LKFIPG + V++ G F+ +EA+ SPLA ++F I G+ V++G D
Sbjct: 10 LFIQAKPTPNPNFLKFIPGGKQVMLNGTYDFTRPREAKCSPLAQKLFLIDGVTRVFYGKD 69
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD---DMGSGDFIESDS 115
+I++ K ++ WE ++P + IMEH+ + +G + +D + E DS
Sbjct: 70 YISIAKKEESRWEEIKPQIFEHIMEHY----QLDSDGQEKKLIIDGYQENQDTQINEDDS 125
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVA 173
VVQ IKE++D R+RP V DGGDIVF+ + + GIV L M+G+C+GCPS+S TLK G+
Sbjct: 126 EVVQLIKEIIDTRIRPTVQEDGGDIVFRDFDEKSGIVQLYMKGSCAGCPSSSVTLKNGIE 185
Query: 174 NILNHFVPEVKDI 186
+L H+V EVK++
Sbjct: 186 RMLCHYVAEVKEV 198
>gi|303274691|ref|XP_003056661.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461013|gb|EEH58306.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 190
Score = 160 bits (405), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 122/175 (69%), Gaps = 9/175 (5%)
Query: 16 FIPGQVVLVEGA-IHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQ-YDWEHL 73
F+PG+ V + ++F+ +EA SPLA ++F+I G+ SV+FG D++TV K++ ++W L
Sbjct: 2 FMPGKPVNPDAPPLNFATPREAMASPLAKKLFAIDGVVSVFFGADYVTVTKNETHEWGVL 61
Query: 74 RPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAV 133
+P V +M+H+ SGDP++ + D +L G+ + D +V IKE+L+ R+RPAV
Sbjct: 62 KPEVFAAVMDHYASGDPLVSD----DAELVAAGTA-IADDDDEIVAMIKELLETRIRPAV 116
Query: 134 ARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
A DGGDIV+KG+ + G+V + MRGAC GCPS+S TLK G+ N+L H+VPEVK++
Sbjct: 117 AEDGGDIVYKGWDESTGVVTVQMRGACDGCPSSSVTLKSGIENMLRHYVPEVKEV 171
>gi|73667413|ref|YP_303429.1| nitrogen-fixing NifU, C-terminal [Ehrlichia canis str. Jake]
gi|72394554|gb|AAZ68831.1| Nitrogen-fixing NifU, C-terminal [Ehrlichia canis str. Jake]
Length = 186
Score = 160 bits (405), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 130/193 (67%), Gaps = 12/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQ E+TPNP TLKF+PG V F++ AE SPLA+ +F + + V+FG DF
Sbjct: 1 MFIQIEETPNPNTLKFMPGVPVNNGKVSEFADNIAAESSPLAAALFKVEHVKGVFFGGDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD---DMGSGDFIESDSA 116
+++ K D+ +W+ L+P VL +IME F++ +P GD D + F E D
Sbjct: 61 VSITKSDEIEWDVLKPEVLTVIME-FLTLNP-------GDSTEDFNEEETDEFFDEKDVE 112
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+V +IKE++++ V+PAV +DGGDI FKGY +GIVF+ +RGACSGCPSAS TLK G+ N+L
Sbjct: 113 MVDKIKELINDYVKPAVMQDGGDIKFKGYSNGIVFVKLRGACSGCPSASITLKEGIYNML 172
Query: 177 NHFVPEVKDIRTV 189
++++P+++ + +V
Sbjct: 173 SYYIPDIQGVESV 185
>gi|189200054|ref|XP_001936364.1| HIRA-interacting protein 5 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983463|gb|EDU48951.1| HIRA-interacting protein 5 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 312
Score = 160 bits (404), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 123/205 (60%), Gaps = 19/205 (9%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
MFIQTE TPN LKF P Q VL E + + N + SPLA+++ +I GI
Sbjct: 70 MFIQTEPTPNADALKFNPNQRVLPENISSPFLEYLNPRSTLAPPHPSPLAAQLMNIDGIT 129
Query: 53 SVYFGYDFITVGKDQYD-WEHLRPPVLGMIMEHFISGDPIIHN-------GGLGDMKLDD 104
SV+FG D+ITV KD W H++P V +I E+ SG PI++ G G + D
Sbjct: 130 SVFFGADYITVTKDSSTPWAHIKPEVFALINEYMTSGQPIVNTVAAKAGEQGQGGQENDS 189
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSA 164
+ + E+D VV IKE+L+ RVRPA+ DGGDI F+G+ DG V+L +RGAC C S+
Sbjct: 190 LA---YDENDDEVVGMIKELLETRVRPAIQEDGGDIEFRGFNDGQVWLKLRGACRTCDSS 246
Query: 165 SETLKYGVANILNHFVPEVKDIRTV 189
+ TLK G+ ++L H++ EVK ++ V
Sbjct: 247 TVTLKNGIESMLMHYIEEVKGVQQV 271
>gi|297182169|gb|ADI18341.1| thioredoxin-like proteins and domains [uncultured Rhodobacterales
bacterium HF4000_03E16]
Length = 146
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 103/151 (68%), Gaps = 6/151 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA R+F++ G+ V+FG+DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEMGTADFPSAEGASASPLAERLFAVNGVEGVFFGHDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + DW+HL+P +LG IMEHF SG P++ G G + D +V
Sbjct: 61 VTVTKAEAMDWDHLKPSLLGAIMEHFQSGAPVMAGDAAG-----PSGHAEHSGEDGEIVS 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIV 150
+IKE+LD+RVRPAVA+DGGDI F G+ G+V
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFERGVV 146
>gi|242011992|ref|XP_002426727.1| HIRA-interacting protein, putative [Pediculus humanus corporis]
gi|212510898|gb|EEB13989.1| HIRA-interacting protein, putative [Pediculus humanus corporis]
Length = 216
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 115/192 (59%), Gaps = 20/192 (10%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKFIPG VL G F NA A SPL +F I G+ SV+FG D
Sbjct: 14 MFIQTQDTPNPNSLKFIPGVKVLENGKTKDFPNAASALCSPLGKSLFRINGVKSVFFGPD 73
Query: 60 FITVGKDQYD--WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FIT+ K D W+ + P + IM+ F SG PI+ ++ DF++ +
Sbjct: 74 FITITKQDEDVSWKLINPEIFATIMDFFSSGLPILT---------ENESKSDFVKEN--- 121
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
E+L+ R+RP V DGGD+VFKG+ +GIV L + G+C+ CPS+ TLK G+ N+L
Sbjct: 122 -----ELLETRIRPTVQEDGGDVVFKGFENGIVKLKLLGSCTTCPSSIVTLKNGIQNMLQ 176
Query: 178 HFVPEVKDIRTV 189
++PEV ++ +
Sbjct: 177 FYIPEVLEVEQI 188
>gi|238650984|ref|YP_002916840.1| hypothetical protein RPR_06295 [Rickettsia peacockii str. Rustic]
gi|238625082|gb|ACR47788.1| hypothetical protein RPR_06295 [Rickettsia peacockii str. Rustic]
Length = 190
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 122/181 (67%), Gaps = 8/181 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTEDTPNP + F PGQ + + + FS E + S LA +F I + SV+FG D
Sbjct: 1 MFIQTEDTPNPDAITFFPGQEISSDQPVFFSELAEVKGRSKLAESLFYINNVKSVFFGSD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ ++P +L +IM+HF+SG P+ + K D++ ++ S +
Sbjct: 61 FITVTKQAEGNWQVIKPEILMVIMDHFVSGLPVFEE----NTKADNVNHN--LDGLSEIE 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E+++ RVRP+VA+DGGDI++KG+ +G+V L++RGAC GCPS++ TLK G+ ++L H
Sbjct: 115 KQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSSTITLKNGIESMLKH 174
Query: 179 F 179
F
Sbjct: 175 F 175
>gi|157804045|ref|YP_001492594.1| NifU-like domain-containing protein [Rickettsia canadensis str.
McKiel]
gi|157785308|gb|ABV73809.1| NifU-like domain [Rickettsia canadensis str. McKiel]
Length = 189
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 127/191 (66%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTEDTPNP +KF PGQ + EG I FS E + S LA +F I + SV+FG D
Sbjct: 1 MFIQTEDTPNPDAIKFFPGQEINSEGPIFFSELAEVKGKSKLAESLFHINNVKSVFFGSD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ ++P +L +IM+HF+SG P+ K D++ ++ +
Sbjct: 61 FITVTKQPESNWQVIKPEILMVIMDHFVSGFPVFEES----TKADNVQHN--LDGLLEIE 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E+++ RVRP+VA+DGGDI++K + +G+V L +RGAC GCPS++ TLK G+ ++L H
Sbjct: 115 KQIIEIIETRVRPSVAQDGGDIIYKCFENGVVKLVLRGACLGCPSSTITLKNGIESMLKH 174
Query: 179 FVPEVKDIRTV 189
FVPEV+ + V
Sbjct: 175 FVPEVQAVEAV 185
>gi|15892941|ref|NP_360655.1| hypothetical protein RC1018 [Rickettsia conorii str. Malish 7]
gi|15620134|gb|AAL03556.1| unknown [Rickettsia conorii str. Malish 7]
Length = 190
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 122/181 (67%), Gaps = 8/181 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTEDTPNP + F PGQ + + + FS E + S LA +F I + SV+FG D
Sbjct: 1 MFIQTEDTPNPDAITFFPGQEISSDQPVFFSELAEVKGRSKLAESLFYINNVKSVFFGSD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ ++P +L +IM+HF+SG P+ + K D++ ++ S +
Sbjct: 61 FITVTKQAEGNWQVIKPEILMVIMDHFVSGFPVFEE----NTKADNVNHN--LDGLSEIE 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E+++ RVRP+VA+DGGDI++KG+ +G+V L++RGAC GCPS++ TLK G+ ++L H
Sbjct: 115 KQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSSTITLKNGIESMLKH 174
Query: 179 F 179
F
Sbjct: 175 F 175
>gi|34581359|ref|ZP_00142839.1| hypothetical protein [Rickettsia sibirica 246]
gi|229587020|ref|YP_002845521.1| NifU-like protein [Rickettsia africae ESF-5]
gi|28262744|gb|EAA26248.1| unknown [Rickettsia sibirica 246]
gi|228022070|gb|ACP53778.1| NifU-like protein [Rickettsia africae ESF-5]
Length = 190
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 122/181 (67%), Gaps = 8/181 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTEDTPNP + F PGQ + + + FS E + S LA +F I + SV+FG D
Sbjct: 1 MFIQTEDTPNPDAITFFPGQEISSDQPVFFSELAEVKGRSKLAESLFYINNVKSVFFGSD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ ++P +L +IM+HF+SG P+ + K D++ ++ S +
Sbjct: 61 FITVTKQAEGNWQVIKPEILMVIMDHFVSGFPVFEE----NTKADNVNHN--LDGLSEIE 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E+++ RVRP+VA+DGGDI++KG+ +G+V L++RGAC GCPS++ TLK G+ ++L H
Sbjct: 115 KQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSSTITLKNGIESMLKH 174
Query: 179 F 179
F
Sbjct: 175 F 175
>gi|168061090|ref|XP_001782524.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666009|gb|EDQ52676.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 118/193 (61%), Gaps = 11/193 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQ E TPNP +L F PG+ V+ G+ F N++ A SPLA IF + G+ V+FG DF
Sbjct: 14 MFIQVESTPNPQSLMFYPGKPVMEVGSSDFPNSRAAMASPLAKSIFIVDGVVRVFFGADF 73
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI-ESDSAVV 118
+TV K + W+ L+P + IM+ + + P+ ++ S I E D V
Sbjct: 74 VTVTKSEDVSWDILKPEIFAAIMDFYATKQPLFYD-------TQSQASDTAIHEDDDETV 126
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS++ TLK G+ N+L
Sbjct: 127 AMIKELLETRIRPAVQDDGGDIEYRGFDPESGIVSLKMQGACSGCPSSAVTLKSGIENML 186
Query: 177 NHFVPEVKDIRTV 189
H+V EVK ++ V
Sbjct: 187 MHYVSEVKGVQEV 199
>gi|330922033|ref|XP_003299669.1| hypothetical protein PTT_10711 [Pyrenophora teres f. teres 0-1]
gi|311326592|gb|EFQ92266.1| hypothetical protein PTT_10711 [Pyrenophora teres f. teres 0-1]
Length = 243
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 122/205 (59%), Gaps = 19/205 (9%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
MFIQTE TPN LKF P Q VL E + + N + SPLA+++ +I G+
Sbjct: 1 MFIQTEPTPNADALKFNPNQRVLPENISSPFLEYLNPRSTLAPPHPSPLAAQLMNIDGVT 60
Query: 53 SVYFGYDFITVGKDQYD-WEHLRPPVLGMIMEHFISGDPIIHN-------GGLGDMKLDD 104
SV+FG D+ITV KD W H++P V +I E+ SG PI++ G G + D
Sbjct: 61 SVFFGADYITVTKDSSTPWAHVKPEVFALINEYMTSGQPIVNTVAAKAGEQGQGGQENDS 120
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSA 164
+ + E+D V+ IKE+L+ RVRPA+ DGGDI F+G+ DG V L +RGAC C S+
Sbjct: 121 LA---YDENDDEVIGMIKELLETRVRPAIQEDGGDIEFRGFNDGQVLLKLRGACRTCDSS 177
Query: 165 SETLKYGVANILNHFVPEVKDIRTV 189
+ TLK G+ ++L H++ EVK ++ V
Sbjct: 178 TVTLKNGIESMLMHYIEEVKGVQQV 202
>gi|157964815|ref|YP_001499639.1| NifU-like protein [Rickettsia massiliae MTU5]
gi|157844591|gb|ABV85092.1| NifU-like protein [Rickettsia massiliae MTU5]
Length = 191
Score = 157 bits (398), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 121/181 (66%), Gaps = 8/181 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQT DTPNP + F PGQ + + + FS E + S LA +F I + SV+FG D
Sbjct: 2 MFIQTADTPNPDAITFFPGQEISSDQPVFFSELAEVQGRSKLAESLFHINNVKSVFFGSD 61
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ ++P +L +IM+HF+SG P+ + K D++ ++ S +
Sbjct: 62 FITVTKQAEGNWQVIKPEILMVIMDHFVSGFPVFEE----NTKADNVNHN--LDGLSEIE 115
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E+++ RVRP+VA+DGGDI++KG+ +G+V L++RGAC GCPS++ TLK G+ ++L H
Sbjct: 116 KQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSSTITLKNGIESMLKH 175
Query: 179 F 179
F
Sbjct: 176 F 176
>gi|212540194|ref|XP_002150252.1| NifU-related protein [Penicillium marneffei ATCC 18224]
gi|210067551|gb|EEA21643.1| NifU-related protein [Penicillium marneffei ATCC 18224]
Length = 321
Score = 157 bits (398), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 124/206 (60%), Gaps = 20/206 (9%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHF-------SNAKEAEISPLASRIFSIPGIA 52
+FIQTE TPNP LKF+P VL E + F S SPLA+++ +I GI+
Sbjct: 81 IFIQTESTPNPDALKFLPNNRVLPENFSTPFLEYLSPRSTLAPPHPSPLAAKLLNIEGIS 140
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPII----HNGGLGDMKL----D 103
SV++G DFITV K +W H++P V +I E SG+PI+ H G D + D
Sbjct: 141 SVFYGPDFITVTKSSDVNWAHVKPEVFSLITEVVTSGEPIVNTVEHTSGAQDAQEGGGED 200
Query: 104 DMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPS 163
+G + E D VV IKE+L+ R+RPA+ DGGDI F+G+ +GIV L +RGAC C S
Sbjct: 201 TLG---YNEEDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFENGIVLLKLRGACRTCDS 257
Query: 164 ASETLKYGVANILNHFVPEVKDIRTV 189
++ TLK G+ ++L H++ EV+ ++ V
Sbjct: 258 STVTLKNGIESMLMHYIEEVQGVQQV 283
>gi|325303172|tpg|DAA34414.1| TPA_inf: NifU-like domain-containing protein [Amblyomma variegatum]
Length = 217
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 111/174 (63%), Gaps = 5/174 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP LKF+P VL +G F N A+ SPLA +F + G+ +V+ G DF
Sbjct: 46 MFIQTQDTPNPNCLKFLPNAKVLEQGTRDFPNIGSAKNSPLARHLFRVEGVKAVFLGPDF 105
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K D+ +W+ ++P + IM+ F +G P++ +G +D E DS V
Sbjct: 106 ITVTKVDDETEWKVIKPHIFAAIMDFFTTGLPVLDDGSASTQVSEDTQPR---EGDSETV 162
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
IKE+++ R+RP V DGGDI++ G+ DG+V L ++G+C+GCPS+S TLK G+
Sbjct: 163 LAIKELIETRIRPTVQEDGGDILYMGFEDGVVKLKLQGSCTGCPSSSVTLKAGI 216
>gi|225711062|gb|ACO11377.1| NFU1 iron-sulfur cluster scaffold homolog [Caligus rogercresseyi]
Length = 237
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 117/194 (60%), Gaps = 11/194 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG--AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
M+I+T++TPNP +LKF+PG VL + F A SPLA +F + G+ V+FG
Sbjct: 27 MYIRTQETPNPQSLKFLPGVRVLETAGSTLDFPTPSAAYCSPLAKLLFRVDGVKGVFFGQ 86
Query: 59 DFITVGKDQ---YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDS 115
DFIT+ K++ +W+ ++P V +M+ F SG PI++ + E D
Sbjct: 87 DFITITKEEDSEVEWKVIKPEVYATLMDFFASGLPIVNEDA------KPHSDTEIHEDDD 140
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE+LD+R+RP V DGGDI+F G+ DGIV L M+G+C+ CPS+ TLK GV N+
Sbjct: 141 DTVAMIKELLDSRIRPTVQEDGGDIIFMGFEDGIVKLKMQGSCTSCPSSIVTLKNGVQNM 200
Query: 176 LNHFVPEVKDIRTV 189
L ++PEV ++ +
Sbjct: 201 LQFYIPEVIEVEQI 214
>gi|62202252|gb|AAH92870.1| Zgc:110319 [Danio rerio]
gi|182890178|gb|AAI64833.1| Zgc:110319 [Danio rerio]
Length = 256
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 115/191 (60%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+ I T+DTPNP +LKF+PG+ VL G F + AE SPLA +F I GI SV++G DF
Sbjct: 52 LSILTQDTPNPRSLKFLPGKPVLGSGTQDFPTSASAESSPLARDLFQISGIKSVFYGPDF 111
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K D +W ++ + +I + F G+ I + + E D +V
Sbjct: 112 ITLTKTDDDVEWTDIKRHAIEVIRKFFEGGEAITTGAAHAESSV--------TEDDDEIV 163
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++FKG+ DG V L + G+C+GCPS++ TLK G+ N++
Sbjct: 164 SLIKELLDTRIRPTVQEDGGDVIFKGFEDGTVKLKLVGSCTGCPSSTVTLKNGIQNMMQF 223
Query: 179 FVPEVKDIRTV 189
++PEV ++ V
Sbjct: 224 YIPEVDNVEQV 234
>gi|225711844|gb|ACO11768.1| NFU1 iron-sulfur cluster scaffold homolog [Lepeophtheirus salmonis]
Length = 238
Score = 157 bits (396), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 117/194 (60%), Gaps = 11/194 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG--AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
M+I+T++TPNP +LKF+PG VL I F A SPLA +F + G+ V+FG
Sbjct: 29 MYIRTQETPNPQSLKFLPGVPVLETAGSTIDFPQPSAAFCSPLAKLLFRVEGVKGVFFGP 88
Query: 59 DFITVGKDQ---YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDS 115
DFIT+ K++ +W+ ++P + IM+ F SG PI++ + E D
Sbjct: 89 DFITITKEEEVNAEWKLMKPLIYATIMDFFASGLPIVNEDA------KPHSDTEIHEDDD 142
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE+LD+R+RP V DGGDIVF G+ DG+V L M+G+C+ CPS+ TLK GV N+
Sbjct: 143 DTVAMIKELLDSRIRPTVQEDGGDIVFMGFDDGVVKLKMQGSCTSCPSSIVTLKNGVQNM 202
Query: 176 LNHFVPEVKDIRTV 189
L ++PEV ++ +
Sbjct: 203 LQFYIPEVLEVEQI 216
>gi|213624625|gb|AAI71359.1| Zgc:110319 [Danio rerio]
Length = 256
Score = 157 bits (396), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 115/191 (60%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+ I T+DTPNP +LKF+PG+ VL G F + AE SPLA +F I GI SV++G DF
Sbjct: 52 LSILTQDTPNPRSLKFLPGKPVLGTGTQDFPTSASAESSPLARDLFQISGIKSVFYGPDF 111
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K D +W ++ + +I + F G+ I + + E D +V
Sbjct: 112 ITLTKTDDDVEWTDIKRHAIEVIRKFFEGGEAITTGAAHAESSV--------TEDDDEIV 163
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++FKG+ DG V L + G+C+GCPS++ TLK G+ N++
Sbjct: 164 SLIKELLDTRIRPTVQEDGGDVIFKGFEDGTVKLKLVGSCTGCPSSTVTLKNGIQNMMQF 223
Query: 179 FVPEVKDIRTV 189
++PEV ++ V
Sbjct: 224 YIPEVDNVEQV 234
>gi|330799706|ref|XP_003287883.1| hypothetical protein DICPUDRAFT_20344 [Dictyostelium purpureum]
gi|325082086|gb|EGC35580.1| hypothetical protein DICPUDRAFT_20344 [Dictyostelium purpureum]
Length = 203
Score = 157 bits (396), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 119/191 (62%), Gaps = 7/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAI-HFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQTE TPNP +LKFIPG VL +G I F + K +++SPLA+ +F I G+ V+F D
Sbjct: 4 IFIQTETTPNPDSLKFIPGVEVLSDGQIMDFPDFKSSQVSPLANSLFKIEGVNRVFFSSD 63
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K + DW L+P + G I++ + SG PI+ D+ D + DS VV
Sbjct: 64 FISVNKYPEQDWAALKPEIYGAIIDFYNSGSPILSEHS-SDINTDTT----ILPEDSEVV 118
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+++ R+RP V DGG+I + G+ DGIV + ++G CS C S+ TLK G+ +L H
Sbjct: 119 AMIKELIETRIRPTVLEDGGNIKYMGFADGIVLVQLQGTCSSCSSSQATLKGGIERMLMH 178
Query: 179 FVPEVKDIRTV 189
++ EVK + +
Sbjct: 179 WIAEVKGVVAI 189
>gi|324120927|ref|NP_001018093.2| NFU1 iron-sulfur cluster scaffold homolog [Danio rerio]
gi|220678983|emb|CAX14770.1| novel protein similar to HIRA interacting protein 5 (hirip5,
zgc:110319) [Danio rerio]
Length = 256
Score = 157 bits (396), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 115/191 (60%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+ I T+DTPNP +LKF+PG+ VL G F + AE SPLA +F I GI SV++G DF
Sbjct: 52 LSILTQDTPNPRSLKFLPGKPVLGTGTQDFPTSASAESSPLARDLFQISGIKSVFYGPDF 111
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K D +W ++ + +I + F G+ I + + E D +V
Sbjct: 112 ITLTKTDDDVEWTDIKRHAIEVISKFFEGGEAITTGAAHAESSV--------TEDDDEIV 163
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++FKG+ DG V L + G+C+GCPS++ TLK G+ N++
Sbjct: 164 SLIKELLDTRIRPTVQEDGGDVIFKGFEDGTVKLKLVGSCTGCPSSTVTLKNGIQNMMQF 223
Query: 179 FVPEVKDIRTV 189
++PEV ++ V
Sbjct: 224 YIPEVDNVEQV 234
>gi|302409492|ref|XP_003002580.1| HIRA-interacting protein [Verticillium albo-atrum VaMs.102]
gi|261358613|gb|EEY21041.1| HIRA-interacting protein [Verticillium albo-atrum VaMs.102]
Length = 292
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 118/198 (59%), Gaps = 9/198 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE TPNP LKF+P VL EG I + N + SPLA+++ +I G+
Sbjct: 66 IFIQTEPTPNPDALKFLPNHRVLPEGISVPYIEYLNPRATIAPPHPSPLAAQLLAIDGVT 125
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI 111
+V++G DFITV K +W H+R + +I E SG P++ + + S +
Sbjct: 126 AVFYGADFITVTKAADANWAHVRAEIFALITEAITSGAPLVVVKEGAEAAPAEEDSLAYN 185
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E DS VV IKE+L+ R+RPA+ DGGDI F+G+ DG+V L +RGAC C S++ TLK G
Sbjct: 186 EDDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGVVLLKLRGACRTCDSSTVTLKNG 245
Query: 172 VANILNHFVPEVKDIRTV 189
+ +L H++ EVK + V
Sbjct: 246 IEGMLMHYIEEVKSVNQV 263
>gi|41351250|gb|AAH65889.1| Zgc:110319 protein [Danio rerio]
Length = 255
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 115/191 (60%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+ I T+DTPNP +LKF+PG+ VL G F + AE SPLA +F I GI SV++G DF
Sbjct: 51 LSILTQDTPNPRSLKFLPGKPVLGTGTQDFPTSASAESSPLARDLFQISGIKSVFYGPDF 110
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K D +W ++ + +I + F G+ I + + E D +V
Sbjct: 111 ITLTKTDDDVEWTDIKRHAIEVISKFFEGGEAITTGAAHAESSV--------TEDDDEIV 162
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++FKG+ DG V L + G+C+GCPS++ TLK G+ N++
Sbjct: 163 SLIKELLDTRIRPTVQEDGGDVIFKGFEDGTVKLKLVGSCTGCPSSTVTLKNGIQNMMQF 222
Query: 179 FVPEVKDIRTV 189
++PEV ++ V
Sbjct: 223 YIPEVDNVEQV 233
>gi|320170179|gb|EFW47078.1| TO42 [Capsaspora owczarzaki ATCC 30864]
Length = 280
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 116/190 (61%), Gaps = 10/190 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKF+PG V+ G F++++ A SPLA ++ I G+ V+F F
Sbjct: 65 MFIQTQDTPNPNSLKFMPGVTVVDAGTYDFADSRAAATSPLARQLLRIQGVNRVFFAQKF 124
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I++ K D+ +W L+P + IM+ F SG P++ + ++ V
Sbjct: 125 ISINKADEAEWPVLKPEIYATIMDFFASGLPVVEAPKTTEEA---------ATEENETVS 175
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+LD+R+RP V DGGDI FK + +G+V L + G+CS CPS+ TL GV+N+L H+
Sbjct: 176 MIKELLDSRIRPMVQEDGGDIEFKSFENGVVKLKLIGSCSTCPSSKATLYDGVSNMLMHY 235
Query: 180 VPEVKDIRTV 189
VPE++ I V
Sbjct: 236 VPEIEKIEQV 245
>gi|148284929|ref|YP_001249019.1| hypothetical protein OTBS_1710 [Orientia tsutsugamushi str.
Boryong]
gi|189184851|ref|YP_001938636.1| thioredoxin-like protein [Orientia tsutsugamushi str. Ikeda]
gi|146740368|emb|CAM80805.1| conserved hypothetical protein [Orientia tsutsugamushi str.
Boryong]
gi|189181622|dbj|BAG41402.1| thioredoxin-like protein [Orientia tsutsugamushi str. Ikeda]
Length = 182
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 122/190 (64%), Gaps = 9/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +LKF P Q + +HFS +E S LA ++FSI + V+FG DF
Sbjct: 1 MFIQTQQTPNPNSLKFFPDQKISPGNPVHFSTREECTHSILARKLFSIENVKEVFFGEDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K WE ++P +L M+M+HF++G P+ + + + ++ + S + +
Sbjct: 61 ITVTKVSDGSWEVIKPEILTMLMDHFVAGLPVFES----EAEKKNIEQANL----SEIEK 112
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+I E+++ +VRPAVA DGGDI + ++DGIV L MRGAC GCPS++ TLK G+ ++L ++
Sbjct: 113 QIIEIINTKVRPAVAMDGGDIEYHSFKDGIVKLQMRGACVGCPSSTMTLKQGIESLLKYY 172
Query: 180 VPEVKDIRTV 189
+PEV + V
Sbjct: 173 IPEVVSVEQV 182
>gi|170084143|ref|XP_001873295.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650847|gb|EDR15087.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 212
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 122/195 (62%), Gaps = 10/195 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPN +LKFI G V+ +G F + + A ISPLA R+ + G++ V++G DF
Sbjct: 1 MFIQTETTPNEDSLKFILGVPVMGDGTAEFLDTRSALISPLAIRLMGVEGVSGVFYGPDF 60
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD--FIESDSAV 117
+TV KD ++ W ++P + +IME F SG + D + + G D +++DS
Sbjct: 61 VTVSKDSEHRWAVVKPEIYSIIMEFFSSGQKLFRT----DEEREQAGPQDTRILDTDSET 116
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYR---DGIVFLSMRGACSGCPSASETLKYGVAN 174
V IKE+L+ RVRPA+ DGGDI F+G+ D +V + ++G+C GC S++ TLK G+
Sbjct: 117 VAMIKELLETRVRPAIMEDGGDIEFRGFDEEGDRLVKVKLKGSCRGCDSSTVTLKSGIER 176
Query: 175 ILNHFVPEVKDIRTV 189
+L H+VPEVK + V
Sbjct: 177 MLMHYVPEVKGVEQV 191
>gi|67516331|ref|XP_658051.1| hypothetical protein AN0447.2 [Aspergillus nidulans FGSC A4]
gi|40747390|gb|EAA66546.1| hypothetical protein AN0447.2 [Aspergillus nidulans FGSC A4]
gi|259489306|tpe|CBF89467.1| TPA: NifU-related protein (AFU_orthologue; AFUA_1G04680)
[Aspergillus nidulans FGSC A4]
Length = 326
Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 12/201 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEAEISP----LASRIFSIPGIA 52
+FIQTE TPNP LKFIP VL E + + + + P LA+ +F++ G+
Sbjct: 89 IFIQTESTPNPDALKFIPNHRVLPEDFPTSFLEYLSPRSTLAPPHPSTLAANLFNVEGVQ 148
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHN---GGLGDMKLDDMGSG 108
SV+FG DFITV K +W H++P V +I + SG+PI++ G K + S
Sbjct: 149 SVFFGTDFITVTKASDTNWAHIKPEVFSLITQAVTSGEPIVNTVEKSGASGQKGGEEDSL 208
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+ E D VV IKE+L+ R+RPA+ DGGDI F+G+ +GIV L +RGAC C S++ TL
Sbjct: 209 SYNEEDDEVVSMIKELLETRIRPAIQEDGGDIEFRGFENGIVMLKLRGACRTCDSSTVTL 268
Query: 169 KYGVANILNHFVPEVKDIRTV 189
+ G+ ++L H++ EV+ + V
Sbjct: 269 RNGIESMLMHYIEEVQGVEQV 289
>gi|225680672|gb|EEH18956.1| HIRA-interacting protein [Paracoccidioides brasiliensis Pb03]
Length = 317
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 120/200 (60%), Gaps = 12/200 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHF-------SNAKEAEISPLASRIFSIPGIA 52
+FIQTE+TPN LKFIP VL E F S SPLAS++ ++ G++
Sbjct: 82 IFIQTENTPNADALKFIPNHSVLPENFPTTFLEYLSPRSTLAPPYPSPLASKLLNVDGVS 141
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPI--IHNGGLGDMKLDDMGSGD 109
+V++G DFIT+ K +W H++P V +I E +GDPI I G G K + S
Sbjct: 142 AVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTAGDPIVTISEAGAGS-KAQEEDSLS 200
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ E D VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ TLK
Sbjct: 201 YNEDDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGIVNLKLRGACRTCDSSTVTLK 260
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ ++L H++ EVK + V
Sbjct: 261 NGIESMLMHYIEEVKGVNQV 280
>gi|226292348|gb|EEH47768.1| HIRA interacting protein [Paracoccidioides brasiliensis Pb18]
Length = 317
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 120/200 (60%), Gaps = 12/200 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHF-------SNAKEAEISPLASRIFSIPGIA 52
+FIQTE+TPN LKFIP VL E F S SPLAS++ ++ G++
Sbjct: 82 IFIQTENTPNADALKFIPNHSVLPENFPTTFLEYLSPRSTLAPPYPSPLASKLLNVDGVS 141
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPI--IHNGGLGDMKLDDMGSGD 109
+V++G DFIT+ K +W H++P V +I E +GDPI I G G K + S
Sbjct: 142 AVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTAGDPIVTISEAGAGS-KAQEEDSLS 200
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ E D VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ TLK
Sbjct: 201 YNEDDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGIVNLKLRGACRTCDSSTVTLK 260
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ ++L H++ EVK + V
Sbjct: 261 NGIESMLMHYIEEVKGVNQV 280
>gi|321261141|ref|XP_003195290.1| iron homeostasis-related protein [Cryptococcus gattii WM276]
gi|317461763|gb|ADV23503.1| Iron homeostasis-related protein, putative [Cryptococcus gattii
WM276]
Length = 309
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 127/193 (65%), Gaps = 9/193 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPN A+LKFIPG V + GA H F + + A SPLA+R+ +I GI V+FG D
Sbjct: 80 MFIQTETTPNEASLKFIPG-VQVTNGAAHEFLDLRSALQSPLATRLLTIDGITGVFFGPD 138
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+T K D Y W L+P V ++MEHF SG + G G+ + +D +++DS +V
Sbjct: 139 FVTCSKDDSYSWSILKPEVFAVLMEHFSSGASLFKEGS-GESQAEDT---RILDTDSEIV 194
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+L+ RVRPA+ DGGDI ++G+ + GIV L ++G+C GC S+S TLK G+ +L
Sbjct: 195 GMIKELLETRVRPAIMEDGGDIEYRGFDEVTGIVKLKLKGSCRGCSSSSVTLKNGIERML 254
Query: 177 NHFVPEVKDIRTV 189
H+VPEV+ + V
Sbjct: 255 THYVPEVQSVEQV 267
>gi|210075172|ref|XP_500339.2| YALI0B00264p [Yarrowia lipolytica]
gi|199425114|emb|CAG82553.2| YALI0B00264p [Yarrowia lipolytica]
Length = 263
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 114/187 (60%), Gaps = 10/187 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT TPN LKF+P +L EG + F++ +EA SPLA ++F + G+ SV FG D
Sbjct: 46 MFIQTASTPNEDALKFLPSVQILPEGHTVEFTSGREAHSSPLAKKLFGVDGVRSVMFGSD 105
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K Q W L+P V ++ EH +G PI+ G +D D DS VV
Sbjct: 106 FITVEKAQDTHWNTLKPEVFSILTEHITAGAPIVMEGTTA---AEDTAPCD---DDSEVV 159
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+++ R+RPA+ DGGDI F+G+ + G+V L + GAC C S++ TLK G+ ++L
Sbjct: 160 SMIKELIETRIRPAIQEDGGDIAFRGFDEDTGVVHLKLLGACRSCDSSAVTLKNGIESML 219
Query: 177 NHFVPEV 183
H+V EV
Sbjct: 220 MHYVEEV 226
>gi|301107396|ref|XP_002902780.1| iron-sulfur cluster scaffold protein Nfu-like protein [Phytophthora
infestans T30-4]
gi|262097898|gb|EEY55950.1| iron-sulfur cluster scaffold protein Nfu-like protein [Phytophthora
infestans T30-4]
Length = 217
Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 121/194 (62%), Gaps = 14/194 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEAEISPLASRIFSIPGIASVYF 56
MFIQTE TPNP ++KF+PG+ VL E G +++E SPLA ++F I G+ V+F
Sbjct: 1 MFIQTEPTPNPLSVKFLPGRSVLDERFTTGVDFTPSSEEVRRSPLAKKLFQIEGVTRVFF 60
Query: 57 GYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDS 115
G DFI+V K ++ DW+ L + IM+ F S + ++ + + + + D
Sbjct: 61 GKDFISVTKTEEEDWDALNAEIFATIMDFFASDEQVMSDEPI-------VTDTTILPDDD 113
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVA 173
VV IKE+L+ R+RP+V DGGDI +KG+ + G V + + G+C+GCPS+S TLK+GV
Sbjct: 114 EVVAMIKELLEQRIRPSVQDDGGDIFYKGFDEKTGTVSVQLAGSCAGCPSSSVTLKHGVE 173
Query: 174 NILNHFVPEVKDIR 187
N+L H++PEV+ I
Sbjct: 174 NMLKHYIPEVRGIE 187
>gi|134114121|ref|XP_774308.1| hypothetical protein CNBG2890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256943|gb|EAL19661.1| hypothetical protein CNBG2890 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 309
Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 127/193 (65%), Gaps = 9/193 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPN A+LKFIPG V + GA H F + + A SPLA+R+ +I GI V+FG D
Sbjct: 80 MFIQTETTPNEASLKFIPG-VQVTNGAAHEFLDLRSALQSPLATRLLTIDGITGVFFGPD 138
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+T K D Y W L+P V ++MEHF SG + G G+ + +D +++DS +V
Sbjct: 139 FVTCSKDDSYSWSILKPEVFAVLMEHFSSGASLFKEGS-GESQAEDT---RILDTDSEIV 194
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+L+ RVRPA+ DGGDI ++G+ + G+V L ++G+C GC S+S TLK G+ +L
Sbjct: 195 GMIKELLETRVRPAIMEDGGDIEYRGFDEDTGLVKLKLKGSCRGCSSSSVTLKNGIERML 254
Query: 177 NHFVPEVKDIRTV 189
H+VPEV+ + V
Sbjct: 255 THYVPEVQSVEQV 267
>gi|225710000|gb|ACO10846.1| NFU1 iron-sulfur cluster scaffold homolog [Caligus rogercresseyi]
Length = 237
Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 117/194 (60%), Gaps = 11/194 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG--AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
M+I+T++TPNP +LKF+PG VL + F A SPLA +F + G+ V+FG
Sbjct: 27 MYIRTQETPNPQSLKFLPGVRVLETAGSTLDFPTPSAAYCSPLAKLLFRVDGVKGVFFGQ 86
Query: 59 DFITVGKDQ---YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDS 115
DFIT+ K++ +W+ ++P V +M+ F SG PI++ + GD
Sbjct: 87 DFITITKEEDSEVEWKVIKPEVYATLMDFFASGLPIVNEDAKPHSDTEIHEDGD------ 140
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE+LD+R+RP V DGGDI+F G+ DGIV L M+G+C+ CPS+ TLK GV N+
Sbjct: 141 DTVAMIKELLDSRIRPTVQEDGGDIIFMGFEDGIVKLKMQGSCTSCPSSIVTLKNGVQNM 200
Query: 176 LNHFVPEVKDIRTV 189
L ++PEV ++ +
Sbjct: 201 LQFYIPEVIEVEQI 214
>gi|70990736|ref|XP_750217.1| NifU-related protein [Aspergillus fumigatus Af293]
gi|66847849|gb|EAL88179.1| NifU-related protein [Aspergillus fumigatus Af293]
gi|159130693|gb|EDP55806.1| NifU-related protein [Aspergillus fumigatus A1163]
Length = 326
Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 119/201 (59%), Gaps = 12/201 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHF-------SNAKEAEISPLASRIFSIPGIA 52
+FIQTE+TPNP LKFIP VL EG F S SPLA+ +F++ G+
Sbjct: 85 IFIQTENTPNPDALKFIPNHRVLPEGFPTSFLEYLSPRSTLAPPHPSPLAANLFNVDGVT 144
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHN---GGLGDMKLDDMGSG 108
SV++G DFITV K +W H++P V +I + SG+ I++ G + + S
Sbjct: 145 SVFYGPDFITVNKSSDANWAHIKPEVFSLITQAVTSGEAIVNTVEKTGEHAQESGEQESL 204
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
F E D VV IKE+L+ R+RPA+ DGGDI +G+ +GIV L +RGAC C S++ TL
Sbjct: 205 SFSEEDDEVVSMIKELLETRIRPAIQEDGGDIELRGFENGIVKLKLRGACRTCDSSTVTL 264
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ ++L H++ EV+ + V
Sbjct: 265 KNGIESMLMHYIEEVQGVEQV 285
>gi|58269446|ref|XP_571879.1| iron ion homeostasis-related protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228115|gb|AAW44572.1| iron ion homeostasis-related protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 309
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 127/193 (65%), Gaps = 9/193 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPN A+LKFIPG V + GA H F + + A SPLA+R+ +I GI V+FG D
Sbjct: 80 MFIQTETTPNEASLKFIPG-VQVTNGAAHEFLDLRSALQSPLATRLLTIDGITGVFFGPD 138
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+T K D Y W L+P V ++MEHF SG + G G+ + +D +++DS +V
Sbjct: 139 FVTCSKDDSYSWSILKPEVFAVLMEHFSSGASLFKEGS-GESQAEDT---RILDTDSEIV 194
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+L+ RVRPA+ DGGDI ++G+ + G+V L ++G+C GC S+S TLK G+ +L
Sbjct: 195 GMIKELLETRVRPAIMEDGGDIEYRGFDEDTGLVKLKLKGSCRGCSSSSVTLKNGIERML 254
Query: 177 NHFVPEVKDIRTV 189
H+VPEV+ + V
Sbjct: 255 THYVPEVQSVEQV 267
>gi|118356024|ref|XP_001011271.1| NifU-like domain containing protein [Tetrahymena thermophila]
gi|89293038|gb|EAR91026.1| NifU-like domain containing protein [Tetrahymena thermophila SB210]
Length = 225
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 121/195 (62%), Gaps = 14/195 (7%)
Query: 1 MFIQTEDTPNPATLKFIP-GQVVLVEGA-IHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+FIQ + TPNP LKF+P G+ V+ +G + F A+ A +SPLA ++F+I G+ V++G
Sbjct: 25 LFIQAKSTPNPNFLKFVPSGKTVMNDGTTLDFIAARYAHVSPLAKKLFTIDGVNRVFYGK 84
Query: 59 DFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNG-GLGDMKLDDMGSGDFIESDSA 116
D+I++ K + DW L+P + +I E F P+ + D K+ D DS
Sbjct: 85 DYISISKKEDADWNELKPQIFSLITEQFTGTTPLFTDEPEREDTKIKD--------DDSE 136
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVAN 174
VQ IKE++D R+RP V DGGD++++ + + GIV L+M G+CSGCPS+ TLK G+
Sbjct: 137 AVQMIKEIIDTRIRPLVQDDGGDVIYRNFDEPSGIVTLTMMGSCSGCPSSQVTLKQGIEK 196
Query: 175 ILNHFVPEVKDIRTV 189
++ H+VPEV + +V
Sbjct: 197 MIMHYVPEVNGVESV 211
>gi|328773127|gb|EGF83164.1| hypothetical protein BATDEDRAFT_9276 [Batrachochytrium
dendrobatidis JAM81]
Length = 225
Score = 154 bits (390), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 114/193 (59%), Gaps = 10/193 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAI---HFSNAKEAEISPLASRIFSIPGIASVYFG 57
MFIQTE TPN +LKF PG++VL EG F +A+EA SPLAS +F I G+ SV FG
Sbjct: 9 MFIQTESTPNLDSLKFKPGKLVLPEGTTSTREFISAREAMQSPLASTLFRIDGVKSVLFG 68
Query: 58 YDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
D ITV K W ++P + G IM+ + SG P+ G D M + DS
Sbjct: 69 KDVITVNKSPDVAWSIIKPDIFGAIMDFYSSGVPLFKVAFEG--PTDTM----ILPEDSE 122
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V IKE+LD R+RP + DGGDI + G+ +G V L +RGAC C S+ TLK G+ N+L
Sbjct: 123 TVAMIKELLDTRIRPTIQEDGGDIEYMGFVNGAVRLKLRGACRTCDSSVVTLKNGIENML 182
Query: 177 NHFVPEVKDIRTV 189
H++PEV + V
Sbjct: 183 MHYIPEVTAVEQV 195
>gi|164657977|ref|XP_001730114.1| hypothetical protein MGL_2496 [Malassezia globosa CBS 7966]
gi|159104009|gb|EDP42900.1| hypothetical protein MGL_2496 [Malassezia globosa CBS 7966]
Length = 276
Score = 154 bits (390), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 119/193 (61%), Gaps = 8/193 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPN +LKF+PG V+ +G F + + + SPLA +F++ G++ V++G DF
Sbjct: 56 MFIQTESTPNEDSLKFLPGCRVMEKGTAEFLDQRSSMTSPLAKDLFALDGVSGVFYGPDF 115
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD W ++P V +ME F +G + + D +++DS VV
Sbjct: 116 VTVTKDTDTPWSAIKPEVYSTMMEFFTAGHSLFPDPSSAQPGSDTT----ILDTDSEVVA 171
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY---RDGIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+LD RVRPA+ DGGD+ ++G+ DGIV + ++G+C GC S++ TLK G+ +L
Sbjct: 172 MIKELLDTRVRPAIQEDGGDLEYRGFGEDSDGIVRVKLKGSCRGCDSSTVTLKSGIERML 231
Query: 177 NHFVPEVKDIRTV 189
H+VPEV+ + V
Sbjct: 232 MHYVPEVQGVEQV 244
>gi|149238520|ref|XP_001525136.1| HIRA-interacting protein 5 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450629|gb|EDK44885.1| HIRA-interacting protein 5 [Lodderomyces elongisporus NRRL YB-4239]
Length = 292
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 120/195 (61%), Gaps = 13/195 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT +TPN LKF+P +L E F + +EA SPLA R+FSI GI S+ FG +
Sbjct: 68 LFIQTAETPNDHALKFLPSLQILGENETREFLSGREAHSSPLAVRLFSIDGIKSIMFGSN 127
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHN--GGLGDMKLDDMGSGDFIESDSA 116
FIT+ K QY+W L+P + ++ E+ G PI++ G L D D+ F E D
Sbjct: 128 FITIEKLPQYEWALLKPEIFSILTEYLNQGLPIMNEEEGALAD----DVA---FNEDDDE 180
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVAN 174
VVQ IKE++ R+RPA+ DGGDI F +R DG VFL ++GAC C S+S TLK G+ +
Sbjct: 181 VVQMIKELIFTRIRPAIQDDGGDIEFVEFRESDGTVFLRLKGACRSCDSSSVTLKNGIES 240
Query: 175 ILNHFVPEVKDIRTV 189
+L H++ EV+ + +
Sbjct: 241 MLKHYIEEVQSVEPI 255
>gi|304320546|ref|YP_003854189.1| NifU-like domain protein [Parvularcula bermudensis HTCC2503]
gi|303299448|gb|ADM09047.1| NifU-like domain protein [Parvularcula bermudensis HTCC2503]
Length = 163
Score = 154 bits (388), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 108/165 (65%), Gaps = 6/165 (3%)
Query: 28 IHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFI 86
+ F + A++SPLAS +F I G+ VY G DF+TV KD +W+HL+P VLG + ++
Sbjct: 1 MDFPTLESAKVSPLASALFDIDGVVEVYLGADFLTVTKDPSVEWQHLKPAVLGTVADYLA 60
Query: 87 SGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR 146
+G P++ G D D+ +V++I ++++ RVRPAVA+DGGDIVF +
Sbjct: 61 AGIPVVDQGAAADSA---DTPDDYEGETKEIVEQIIDLIETRVRPAVAQDGGDIVFHRFV 117
Query: 147 --DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
DGIVFLSMRGACSGCPS++ TLK G+ N+L H+VPEV + V
Sbjct: 118 PGDGIVFLSMRGACSGCPSSTMTLKSGIENLLKHYVPEVTAVEAV 162
>gi|88606830|ref|YP_504700.1| NifU domain-containing protein [Anaplasma phagocytophilum HZ]
gi|88597893|gb|ABD43363.1| NifU domain protein [Anaplasma phagocytophilum HZ]
Length = 188
Score = 154 bits (388), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 127/192 (66%), Gaps = 7/192 (3%)
Query: 1 MFIQTEDTPNPATLKFI-PGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E TPNP TLKF+ +VV + F +A +A+ SPLA +F + G+ V+FG D
Sbjct: 1 MFIQIESTPNPDTLKFLLSAEVVGINSGAEFLSADDAQASPLARLLFEVEGVEKVFFGGD 60
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEH-FISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
F+++ K + WE L+P VL ++ ++ + G H + + + E DS +
Sbjct: 61 FVSITKAENILWEVLKPEVLVVMTDYCLLQGTDKEHVQASAEDEEKEFFD----EKDSEI 116
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
VQ++KE+++N V+PAVA+DGGDI F+GY++G+VF+ +RGACSGCPSA+ TLK GV +L+
Sbjct: 117 VQQVKELIENYVKPAVAQDGGDIKFRGYKEGVVFVKLRGACSGCPSAAVTLKDGVYGMLS 176
Query: 178 HFVPEVKDIRTV 189
+++P +K + ++
Sbjct: 177 YYIPAIKAVESI 188
>gi|220678984|emb|CAX14771.1| novel protein similar to HIRA interacting protein 5 (hirip5,
zgc:110319) [Danio rerio]
Length = 233
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 111/185 (60%), Gaps = 10/185 (5%)
Query: 7 DTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK- 65
DTPNP +LKF+PG+ VL G F + AE SPLA +F I GI SV++G DFIT+ K
Sbjct: 35 DTPNPRSLKFLPGKPVLGTGTQDFPTSASAESSPLARDLFQISGIKSVFYGPDFITLTKT 94
Query: 66 -DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEV 124
D +W ++ + +I + F G+ I + + E D +V IKE+
Sbjct: 95 DDDVEWTDIKRHAIEVISKFFEGGEAITTGAAHAESSV--------TEDDDEIVSLIKEL 146
Query: 125 LDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVK 184
LD R+RP V DGGD++FKG+ DG V L + G+C+GCPS++ TLK G+ N++ ++PEV
Sbjct: 147 LDTRIRPTVQEDGGDVIFKGFEDGTVKLKLVGSCTGCPSSTVTLKNGIQNMMQFYIPEVD 206
Query: 185 DIRTV 189
++ V
Sbjct: 207 NVEQV 211
>gi|242802633|ref|XP_002484010.1| NifU-related protein [Talaromyces stipitatus ATCC 10500]
gi|218717355|gb|EED16776.1| NifU-related protein [Talaromyces stipitatus ATCC 10500]
Length = 321
Score = 153 bits (387), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 119/203 (58%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHF-------SNAKEAEISPLASRIFSIPGIA 52
+FIQTE TPNP LKF+P VL E F S SPLA+++ ++ G++
Sbjct: 81 IFIQTESTPNPDALKFLPNHRVLPENFPTPFLEYLSPRSTLAPPHPSPLAAKLLNVEGVS 140
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG--- 108
SV++G DFITV K +W H++P V +I E SG+PI++ D G
Sbjct: 141 SVFYGPDFITVTKQSDVNWAHIKPEVFSLITEVVTSGEPIVNTVERTSGAQDAQEGGGED 200
Query: 109 --DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ E D VV IKE+L+ R+RPA+ DGGDI F+G+ +GIV L +RGAC C S++
Sbjct: 201 TLSYNEEDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFENGIVLLKLRGACRTCDSSTV 260
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ ++L H++ EV+ ++ V
Sbjct: 261 TLKNGIESMLMHYIEEVQGVQQV 283
>gi|71083083|ref|YP_265802.1| NifU-like domain-containing protein [Candidatus Pelagibacter ubique
HTCC1062]
gi|91762490|ref|ZP_01264455.1| NifU-like domain protein [Candidatus Pelagibacter ubique HTCC1002]
gi|71062196|gb|AAZ21199.1| NifU-like domain protein [Candidatus Pelagibacter ubique HTCC1062]
gi|91718292|gb|EAS84942.1| NifU-like domain protein [Candidatus Pelagibacter ubique HTCC1002]
Length = 180
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 122/188 (64%), Gaps = 13/188 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP +LKF+PG+ V G+ +E + + L I SI G+ V+ G DF
Sbjct: 1 MFIQTEVTPNPNSLKFLPGKTVSNNGSFEVIKKEETD-NELVRNILSINGVTGVFLGEDF 59
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDP-IIHNGGLGDMKLDDMGSGDFIESDSAVV 118
I++ K ++ +WE ++ + +I + + +G +I N LG+ K E + +
Sbjct: 60 ISINKNEEVNWEDIKHIAISLINDFYSTGKEFVIANELLGEKK----------EEHTEIE 109
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I +L++++RPAVA+DGGDI FK ++DGIV + ++G+CSGCPS++ TLK GV N+L H
Sbjct: 110 KQIISILESKIRPAVAKDGGDIKFKEFKDGIVKVELQGSCSGCPSSTMTLKQGVQNLLCH 169
Query: 179 FVPEVKDI 186
++PEVK++
Sbjct: 170 YLPEVKEV 177
>gi|255940800|ref|XP_002561169.1| Pc16g08500 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585792|emb|CAP93520.1| Pc16g08500 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 320
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 116/200 (58%), Gaps = 11/200 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--------VEGAIHFSNAKEAEISPLASRIFSIPGIA 52
+FIQTE+TPNP LKFIP VL +E S SPLA+++ + G+
Sbjct: 84 IFIQTENTPNPDALKFIPNHRVLPEDFPSTFLEYMSPRSTLAPPHPSPLAAKLLDVEGVT 143
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHN--GGLGDMKLDDMGSGD 109
SV++G DFITV K +W H++P V +I + SG+ I+ G + + S
Sbjct: 144 SVFYGTDFITVTKGSDANWAHIKPEVFSIITQAVTSGETIVTTIEGAVDGEQESGEDSLS 203
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
F E D VV IKE+L+ R+RPA+ DGGDI KG+ +GIV L +RGAC C S++ TLK
Sbjct: 204 FNEDDDEVVSMIKELLETRIRPAIQEDGGDIELKGFENGIVMLKLRGACRTCDSSTVTLK 263
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ ++L H++ EVK + V
Sbjct: 264 NGIESMLMHYIEEVKGVEQV 283
>gi|226480566|emb|CAX73380.1| HIRA interacting protein 5 [Schistosoma japonicum]
gi|226480792|emb|CAX73493.1| HIRA interacting protein 5 [Schistosoma japonicum]
Length = 233
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 119/190 (62%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+FIQ ++TPNP +LK+ PGQ VL G F + K+A SPLA ++F I G+ V+FG DF
Sbjct: 25 LFIQAQETPNPNSLKYFPGQAVLGSGTRDFPSRKQAGSSPLARQLFRIEGVEQVFFGPDF 84
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
IT+ K+ ++W ++P V IM+ + SG P+I + S E D V
Sbjct: 85 ITITKNNDFEWAVIKPDVYATIMDFYSSGQPVIDEEKSQE-------SDKPCEVDDETVL 137
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+LD R+RP V DGGDI++KG++DGIV L ++G+CS CPS+ TLK GV N+L +
Sbjct: 138 MIKELLDTRIRPTVQEDGGDIIYKGFKDGIVLLKLQGSCSSCPSSVVTLKNGVQNMLQFY 197
Query: 180 VPEVKDIRTV 189
+P+V + V
Sbjct: 198 IPDVLGVEQV 207
>gi|238486392|ref|XP_002374434.1| NifU-related protein [Aspergillus flavus NRRL3357]
gi|317144282|ref|XP_003189583.1| nifU-related protein [Aspergillus oryzae RIB40]
gi|220699313|gb|EED55652.1| NifU-related protein [Aspergillus flavus NRRL3357]
Length = 329
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 119/201 (59%), Gaps = 12/201 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--------VEGAIHFSNAKEAEISPLASRIFSIPGIA 52
+FIQTE+TPNP LKFIP VL +E S SPLA+ +F++ G+
Sbjct: 88 IFIQTENTPNPDALKFIPNHRVLPEDFPTSFLEYLSPRSTLAPPHPSPLAANLFNVDGVT 147
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHN---GGLGDMKLDDMGSG 108
S++FG +FITV K +W H++P + +I + SG+PI++ G + + S
Sbjct: 148 SIFFGPEFITVTKASDANWAHIKPEIFSLITQAVTSGEPIVNTVAKSGENAQEGGEEESL 207
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+ E D VV IKE+L+ R+RPA+ DGGDI +G+ +GIV L +RGAC C S++ TL
Sbjct: 208 SYNEEDDEVVSMIKELLETRIRPAIQEDGGDIELRGFENGIVMLKLRGACRTCDSSTVTL 267
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ ++L H++ EV+ + V
Sbjct: 268 KNGIESMLMHYIEEVQGVEQV 288
>gi|198427432|ref|XP_002130447.1| PREDICTED: similar to NFU1 iron-sulfur cluster scaffold homolog (S.
cerevisiae) [Ciona intestinalis]
Length = 284
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 119/194 (61%), Gaps = 12/194 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT +TPNP LKF+PG VL G F + K + SPLA R+F I G+ +V+ G DF
Sbjct: 72 MFIQTFETPNPNCLKFVPGVPVLGTGTADFPDWKNSYKSPLAKRLFGIEGVKAVFLGPDF 131
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGD-PIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+TV + ++ W+ L+P + ++M+ F +G+ P++ + G E D +
Sbjct: 132 LTVTRQDEEVQWKVLKPEIYSLVMDFFTAGNIPVLTDEGPS-------ADTVVDEDDDEI 184
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANI 175
V +KE+LD R+RP V DGGDI+FKG+ G V L ++G+CS CPS+S TLK G+ N+
Sbjct: 185 VAMVKELLDTRIRPTVMEDGGDIIFKGFDPETGSVKLKLQGSCSNCPSSSVTLKSGIENM 244
Query: 176 LNHFVPEVKDIRTV 189
L ++PEV ++ V
Sbjct: 245 LKFYIPEVMEVEEV 258
>gi|331214376|ref|XP_003319869.1| iron-sulfur cluster scaffold protein Nfu [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309298859|gb|EFP75450.1| iron-sulfur cluster scaffold protein Nfu [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 357
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 119/199 (59%), Gaps = 18/199 (9%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+FIQTE TPN LKFIPG+ V+ G+ F + SPLA + S+ G+ SV+FG DF
Sbjct: 139 IFIQTEPTPNADALKFIPGRPVMKSGSREFLKGDDTRSSPLARSLLSVEGVKSVFFGPDF 198
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGD-------PIIHNGGLGDMKLDDMGSGDFIE 112
I++ K+ + W ++P + ++ME F + D PI G D ++ D
Sbjct: 199 ISINKESEVGWPTMKPEIYSLLMEFFSASDRPVVQEGPIEEESGPLDTRIHD-------- 250
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKY 170
DS VV IKE+LD RVRPA+ DGGD+ +KG+ + G+V L ++G+C GC S++ TLK
Sbjct: 251 DDSEVVAMIKELLDTRVRPAIQEDGGDLEYKGFNEETGVVQLMLKGSCRGCDSSAVTLKS 310
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ +L H+VPEV+ + V
Sbjct: 311 GIERMLMHYVPEVQCVEQV 329
>gi|302695957|ref|XP_003037657.1| hypothetical protein SCHCODRAFT_48637 [Schizophyllum commune H4-8]
gi|300111354|gb|EFJ02755.1| hypothetical protein SCHCODRAFT_48637 [Schizophyllum commune H4-8]
Length = 220
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 124/197 (62%), Gaps = 13/197 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE-GAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPN ++KFIPG V+ E G F + + A SPLA R+ I G+ +V++G D
Sbjct: 1 MFIQTESTPNEDSIKFIPGVPVMGESGTAEFLDTRSALTSPLAVRLMGIEGVRAVFYGPD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG----DFIESD 114
F+TV K ++ W ++P + ++ME F S +N L K D +G +++D
Sbjct: 61 FVTVSKSSEHPWSVIKPEIYSVLMEFFTS-----NNQPLFRSKEDRENAGPQDTRILDTD 115
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGV 172
S VV IKE+L+ RVRPA+ DGGDI ++G+ + G+V + ++G+C GC S++ TLK G+
Sbjct: 116 SDVVAMIKELLETRVRPAIMEDGGDIEYRGFDEESGVVQVKLKGSCRGCSSSTVTLKTGI 175
Query: 173 ANILNHFVPEVKDIRTV 189
N+L H++PEVK + V
Sbjct: 176 ENMLMHYIPEVKGVEQV 192
>gi|148697451|gb|EDL29398.1| mCG14627 [Mus musculus]
Length = 181
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 110/179 (61%), Gaps = 8/179 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + FS A SPLA ++F I G+ SV+FG DF
Sbjct: 1 MFIQTQDTPNPNSLKFIPGKRVLETRTMDFSTPAAAFRSPLARQLFRIEGVKSVFFGPDF 60
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ + GS E D VV
Sbjct: 61 ITVTKENGELDWNLLKPDIHATIMDFFASGLPLVTEE--TPPPPGEAGS----EEDDGVV 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+LD R+RP V DGGD++++ + DGIV L ++G+C CPS+ TLK G+ +
Sbjct: 115 AMIKELLDTRIRPTVQEDGGDVIYRAFEDGIVRLKLQGSCPSCPSSIITLKSGIRTCCS 173
>gi|91205888|ref|YP_538243.1| NifU-like protein [Rickettsia bellii RML369-C]
gi|157826752|ref|YP_001495816.1| NifU-like protein [Rickettsia bellii OSU 85-389]
gi|91069432|gb|ABE05154.1| NifU-like protein [Rickettsia bellii RML369-C]
gi|157802056|gb|ABV78779.1| NifU-like protein [Rickettsia bellii OSU 85-389]
Length = 185
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 124/181 (68%), Gaps = 11/181 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTEDTPNP +KF PGQ + + I FS E + S LA +F+I + S++FG D
Sbjct: 1 MFIQTEDTPNPDAIKFFPGQEISTQ-PIFFSERAEVKGKSKLAESLFNINNVKSIFFGSD 59
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + DW+ ++P VL ++M+HF++G P+ K+DD+ +E S +
Sbjct: 60 FITVTKKTESDWQVIKPEVLMVVMDHFVAGFPVFEVSS----KVDDVN----LEGFSDIE 111
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E+++ RVRP+VA+DGGDI++KG+ +G+V L++RGAC GCPS++ TLK G+ ++L H
Sbjct: 112 KQIIEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSSTITLKNGIESMLKH 171
Query: 179 F 179
F
Sbjct: 172 F 172
>gi|322710719|gb|EFZ02293.1| NifU-like protein [Metarhizium anisopliae ARSEF 23]
Length = 297
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 122/202 (60%), Gaps = 16/202 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE+TPNP LKF+P V+ E I + N + SPLA+++ +I GI
Sbjct: 73 IFIQTENTPNPDALKFLPNHRVVPEEINTPFIEYLNPRSTISPPYPSPLAAKLMNIDGIT 132
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPII----HNGGLGDMKLDDMGS 107
SV++G DFITV K +W H+RP + +I E SG+ I+ G D++ D +
Sbjct: 133 SVFYGADFITVTKAGDANWAHVRPEIFALITEAITSGETIVSIAERKEGDEDIEEDSLA- 191
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASET 167
+ E+DS VV IKE+L+ R+RPA+ DGGDI F+G+ DG V L +RGAC C S++ T
Sbjct: 192 --YNENDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFDDGYVKLKLRGACRTCDSSTVT 249
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
LK G+ +L H++ EVK + +
Sbjct: 250 LKNGIEGMLMHYIEEVKGVHQI 271
>gi|212540196|ref|XP_002150253.1| NifU-related protein [Penicillium marneffei ATCC 18224]
gi|210067552|gb|EEA21644.1| NifU-related protein [Penicillium marneffei ATCC 18224]
Length = 285
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 118/197 (59%), Gaps = 20/197 (10%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHF-------SNAKEAEISPLASRIFSIPGIA 52
+FIQTE TPNP LKF+P VL E + F S SPLA+++ +I GI+
Sbjct: 81 IFIQTESTPNPDALKFLPNNRVLPENFSTPFLEYLSPRSTLAPPHPSPLAAKLLNIEGIS 140
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPII----HNGGLGDMKL----D 103
SV++G DFITV K +W H++P V +I E SG+PI+ H G D + D
Sbjct: 141 SVFYGPDFITVTKSSDVNWAHVKPEVFSLITEVVTSGEPIVNTVEHTSGAQDAQEGGGED 200
Query: 104 DMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPS 163
+G + E D VV IKE+L+ R+RPA+ DGGDI F+G+ +GIV L +RGAC C S
Sbjct: 201 TLG---YNEEDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFENGIVLLKLRGACRTCDS 257
Query: 164 ASETLKYGVANILNHFV 180
++ TLK G+ ++L H+V
Sbjct: 258 STVTLKNGIESMLMHYV 274
>gi|115376684|ref|ZP_01463912.1| NifU domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310823922|ref|YP_003956280.1| NIF system FeS cluster assembly, NifU family protein [Stigmatella
aurantiaca DW4/3-1]
gi|115366301|gb|EAU65308.1| NifU domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309396994|gb|ADO74453.1| NIF system FeS cluster assembly, NifU family protein [Stigmatella
aurantiaca DW4/3-1]
Length = 187
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 117/189 (61%), Gaps = 8/189 (4%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYDFI 61
IQ E TPNP+TLK++ + +L GA++F+ +EAE SPLA ++ I G+ +V G +F+
Sbjct: 5 IQLEWTPNPSTLKYVVDRRLLSSGAVNFTRREEAEQKSPLARKLMDIQGVTAVMLGLNFV 64
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
TV K D+ +W+ L V+ + H S +P++ D E S+V QR
Sbjct: 65 TVTKGDEGEWDELNDAVMSTLDAHLGSDEPVV------DEAAVAAARAAPAEGGSSVEQR 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I+E+LD +RPAVA+DGGDI Y +G+V+L M+G+CSGCPS++ TLK G+ L +
Sbjct: 119 IREILDAEIRPAVAQDGGDITLDRYENGVVYLHMQGSCSGCPSSTATLKMGIEGRLREAI 178
Query: 181 PEVKDIRTV 189
PEV ++ ++
Sbjct: 179 PEVTEVVSI 187
>gi|310796741|gb|EFQ32202.1| hypothetical protein GLRG_07346 [Glomerella graminicola M1.001]
Length = 316
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 122/207 (58%), Gaps = 18/207 (8%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEAEI----SPLASRIFSIPGIA 52
+FIQTE TPN +KF+P +L E I + N + SPLA+++ +I G+
Sbjct: 80 IFIQTEQTPNADAIKFLPNHRILPENISTPFIEYLNPRSTIAPPYPSPLAAQLMNIDGVT 139
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIH-----NGGLGDMKLDDMG 106
SV++G DFITV K +W H+RP V +I E SG I++ GG+ + G
Sbjct: 140 SVFYGADFITVSKAADANWAHIRPEVFALITEAITSGQSIVNVAEKKEGGVAGEEQQQHG 199
Query: 107 SGD---FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCP 162
D + E+DS VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C
Sbjct: 200 EEDSLAYDENDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFTDDGIVLLKLRGACRTCD 259
Query: 163 SASETLKYGVANILNHFVPEVKDIRTV 189
S++ TLK G+ +L H++ EVK ++ +
Sbjct: 260 SSTVTLKNGIEGMLMHYIEEVKGVQQI 286
>gi|322696539|gb|EFY88330.1| NifU-like protein [Metarhizium acridum CQMa 102]
Length = 297
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 122/202 (60%), Gaps = 16/202 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE+TPNP LKF+P V+ E I + N + SPLA+++ +I GI
Sbjct: 73 IFIQTENTPNPDALKFLPNHRVVPEEINTPFIEYLNPRSTISPPYPSPLAAKLMNIDGIT 132
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPII----HNGGLGDMKLDDMGS 107
SV++G DFITV K +W H+RP + +I E SG+ I+ G D++ D +
Sbjct: 133 SVFYGADFITVTKAGDANWAHIRPEIFALITEAITSGETIVSVAERKEGDEDIEEDSLA- 191
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASET 167
+ E+DS VV IKE+L+ R+RPA+ DGGDI ++G+ DG V L +RGAC C S++ T
Sbjct: 192 --YNENDSEVVGMIKELLETRIRPAIQEDGGDIEYRGFDDGYVKLKLRGACRTCDSSTVT 249
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
LK G+ +L H++ EVK + +
Sbjct: 250 LKNGIEGMLMHYIEEVKGVHQI 271
>gi|224009450|ref|XP_002293683.1| nifu-like protein [Thalassiosira pseudonana CCMP1335]
gi|220970355|gb|EED88692.1| nifu-like protein [Thalassiosira pseudonana CCMP1335]
Length = 210
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 124/194 (63%), Gaps = 15/194 (7%)
Query: 1 MFIQTEDTPNPATLKFIP-GQVVLVEGAIHFSNAKEAEI---SPLASRIFSIP-GIASVY 55
+FIQT TPNP +LKFIP G++ + A + K+ + SPLA ++F++ GI S+Y
Sbjct: 15 LFIQTATTPNPESLKFIPNGRLNNTDTAGFYVTRKDHTLIARSPLAKQLFNLDIGIKSLY 74
Query: 56 FGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD 114
GYDFITV K + W+HL+ P+ G IM+ + SG P + G+ ++ D +E D
Sbjct: 75 LGYDFITVTKFAEAHWQHLQTPIFGAIMDFYASGKPALR----GEPEITDTT---ILEDD 127
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGV 172
VV IKE+L++R+RPAV DGGDI + G+ + G+V + + G+C GCPS+S TLK GV
Sbjct: 128 DEVVAMIKELLESRIRPAVQEDGGDIRYVGFEEETGLVTVQLAGSCVGCPSSSVTLKNGV 187
Query: 173 ANILNHFVPEVKDI 186
N+L H++PEV +
Sbjct: 188 ENMLMHYIPEVTAV 201
>gi|328872467|gb|EGG20834.1| NIF system FeS cluster assembly domain-containing protein
[Dictyostelium fasciculatum]
Length = 313
Score = 151 bits (381), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 118/190 (62%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+FIQTE TPNP +LKF+PG V+ +G + F + K ++ISPLA+ IF + G+ V+FG F
Sbjct: 104 IFIQTETTPNPDSLKFLPGVEVMEQGTVDFPDFKSSQISPLANAIFKLDGVNRVFFGPSF 163
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I+V K + +W L+P V G I+ + SG P++ + D + + D VV
Sbjct: 164 ISVNKFTETEWSILKPQVYGAIINFYHSGQPLLLEKPSAENN-DTL----ILPEDDEVVA 218
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ R+RP + DGG+I + G++DGIV + ++G CS C S+ TLK G+ +L H+
Sbjct: 219 MIKELIETRIRPTLLDDGGNIQYLGFKDGIVLVKLQGTCSSCSSSQATLKGGIERMLMHW 278
Query: 180 VPEVKDIRTV 189
+ EV+ I V
Sbjct: 279 ISEVRGIMAV 288
>gi|150864668|ref|XP_001383601.2| hypothetical protein PICST_82838 [Scheffersomyces stipitis CBS
6054]
gi|149385924|gb|ABN65572.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 254
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 121/196 (61%), Gaps = 15/196 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT +TPN + LKF+P +L E I F + +EA SPLA ++FSI GI S+ FG +
Sbjct: 33 LFIQTVETPNESALKFLPSIKLLEENETIEFLSGREAARSPLAVKLFSIDGIKSIMFGSN 92
Query: 60 FITVGKDQYD--WEHLRPPVLGMIMEHFISGDPIIHNGGL--GDMKLDDMGSGDFIESDS 115
FIT+ K+ D W L+P + ++ E+ +G PI+ +G DM+++D D
Sbjct: 93 FITIEKNSNDLHWSLLKPEIFSILTEYLTNGTPILIDGESLSKDMEIND--------DDD 144
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVA 173
VV IKE++ R+RPA+ DGGDI F +R DG VFL ++GAC C S+S TLK G+
Sbjct: 145 EVVSIIKELIFTRIRPAIQDDGGDIEFVSFREEDGTVFLRLKGACRSCDSSSVTLKNGIE 204
Query: 174 NILNHFVPEVKDIRTV 189
++L +++ EVK + V
Sbjct: 205 SMLKYYIEEVKAVEQV 220
>gi|162312172|ref|NP_595452.2| NifU-like protein [Schizosaccharomyces pombe 972h-]
gi|46397296|sp|Q9UUB8|YH9J_SCHPO RecName: Full=NifU-like protein C1709.19c
gi|157310401|emb|CAA21258.2| NifU-like protein [Schizosaccharomyces pombe]
Length = 260
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 118/194 (60%), Gaps = 10/194 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--VEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
++I++E+TPN LKF+PG +L G+ F + SPLA ++F I G+ S++FG
Sbjct: 43 IWIRSEETPNENALKFLPGLDILPPTIGSCEFMRGQGTVNSPLAQKLFDIDGVDSIFFGK 102
Query: 59 DFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
DFITV K +W ++P V +IMEH +G P+ L + L +ESDS +
Sbjct: 103 DFITVSKGAGTEWAQMKPEVFSVIMEHLSNGSPV-----LSEEPLKGASDTQILESDSQI 157
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE+++ +RP++ DGGD+ F+G+ + G V L +RGAC C S++ TLK G+ +
Sbjct: 158 VAMIKELIETSIRPSIQEDGGDVEFRGFDEKTGTVSLKLRGACRTCSSSAVTLKNGIQQM 217
Query: 176 LNHFVPEVKDIRTV 189
L H++PEV+++ V
Sbjct: 218 LKHYIPEVENVVQV 231
>gi|119496847|ref|XP_001265197.1| NifU-related protein [Neosartorya fischeri NRRL 181]
gi|119413359|gb|EAW23300.1| NifU-related protein [Neosartorya fischeri NRRL 181]
Length = 326
Score = 150 bits (379), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 118/201 (58%), Gaps = 12/201 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHF-------SNAKEAEISPLASRIFSIPGIA 52
+FIQTE+TPNP LKFIP VL E F S SPLA+ +F++ G+
Sbjct: 85 IFIQTENTPNPDALKFIPNHRVLPEDFPTSFLEYLSPRSTLAPPHPSPLAANLFNVDGVT 144
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHN---GGLGDMKLDDMGSG 108
SV++G DFITV K +W H++P V +I + SG+ I++ G + + S
Sbjct: 145 SVFYGPDFITVSKSSDANWAHIKPEVFSLITQAVTSGEAIVNTVEKTGEHAQEGGEEESL 204
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
F E D VV IKE+L+ R+RPA+ DGGDI +G+ +GIV L +RGAC C S++ TL
Sbjct: 205 SFNEEDDEVVSMIKELLETRIRPAIQEDGGDIELRGFENGIVKLKLRGACRTCDSSTVTL 264
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ ++L H++ EV+ + V
Sbjct: 265 KNGIESMLMHYIEEVQGVEQV 285
>gi|157826074|ref|YP_001493794.1| hypothetical protein A1C_05170 [Rickettsia akari str. Hartford]
gi|157800032|gb|ABV75286.1| hypothetical protein A1C_05170 [Rickettsia akari str. Hartford]
Length = 190
Score = 150 bits (379), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/181 (43%), Positives = 120/181 (66%), Gaps = 8/181 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTEDTPNP +KF PGQ + + + FS E + S LA +F I + S++FG D
Sbjct: 1 MFIQTEDTPNPDAIKFFPGQEISSDQPVFFSELAEVKGRSKLAESLFHINNVKSIFFGSD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ ++P VL +IM+HF++G P+ D + I+ S +
Sbjct: 61 FITVTKQAEGNWQIIKPEVLMIIMDHFVAGFPVFEESTKADTVNHN------IDGFSEIE 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E+++ RVRP+VA+DGGDI++KG+ +G+V L++RGAC GCPS++ TLK G+ ++L H
Sbjct: 115 KQIIEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACRGCPSSTITLKNGIESMLKH 174
Query: 179 F 179
F
Sbjct: 175 F 175
>gi|241959110|ref|XP_002422274.1| nifU-like protein, mitochondrial precursor, putative; protein
involved in iron metabolism in mitochondria, putative
[Candida dubliniensis CD36]
gi|223645619|emb|CAX40278.1| nifU-like protein, mitochondrial precursor, putative [Candida
dubliniensis CD36]
Length = 302
Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 116/191 (60%), Gaps = 11/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAI-HFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT +TPN LKF+P +L + F + +EA SPLA ++FSI GI SV FG D
Sbjct: 77 LFIQTSETPNEQALKFLPSIKILQDNQTKEFLSGREAASSPLALKLFSIDGIRSVMFGSD 136
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD----MKLDDMGSGDFIESD 114
FIT+ K + +DW L+P + ++ E+ +G PI+ G+ + + +DM E D
Sbjct: 137 FITIEKLNNFDWSLLKPEIFSILTEYLTNGTPILLEDGVDEDGNSLLTNDMAIN---EDD 193
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGV 172
VV IKE++ R+RPA+ DGGDI F + DG V+L ++GAC C S+S TLK G+
Sbjct: 194 DEVVSMIKELIFTRIRPAIQDDGGDIEFVNFNEEDGTVYLRLKGACRSCDSSSVTLKNGI 253
Query: 173 ANILNHFVPEV 183
++L H++ EV
Sbjct: 254 ESMLKHYIEEV 264
>gi|121702857|ref|XP_001269693.1| NifU-related protein [Aspergillus clavatus NRRL 1]
gi|119397836|gb|EAW08267.1| NifU-related protein [Aspergillus clavatus NRRL 1]
Length = 320
Score = 150 bits (378), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 117/201 (58%), Gaps = 12/201 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--------VEGAIHFSNAKEAEISPLASRIFSIPGIA 52
+FIQTE+TPNP LKFIP VL +E S SPLA+ +F++ G+
Sbjct: 79 IFIQTENTPNPDALKFIPNHRVLPEEFPTSFLEYLSPRSTLAPPHPSPLAANLFNVEGVT 138
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD-- 109
SV++G DFITV K +W H++P V +I + SG+ I++ + G D
Sbjct: 139 SVFYGPDFITVTKSSDANWAHIKPEVFSLITQAVTSGETIVNTVEKSGEHAQEGGEQDSL 198
Query: 110 -FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
F E D V+ IKE+L+ R+RPA+ DGGDI +G+ +GIV L +RGAC C S++ TL
Sbjct: 199 SFNEEDDEVIGMIKELLETRIRPAIQEDGGDIELRGFENGIVKLKLRGACRTCDSSTVTL 258
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ ++L H++ EV+ + V
Sbjct: 259 KNGIESMLMHYIEEVQGVEQV 279
>gi|169608792|ref|XP_001797815.1| hypothetical protein SNOG_07481 [Phaeosphaeria nodorum SN15]
gi|111063827|gb|EAT84947.1| hypothetical protein SNOG_07481 [Phaeosphaeria nodorum SN15]
Length = 263
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 120/202 (59%), Gaps = 19/202 (9%)
Query: 4 QTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIASVY 55
+TE TPN LKF P Q VL E + + N + SPLA+++ +I G+ SV+
Sbjct: 24 KTEPTPNDDALKFNPNQRVLPESISSPFLEYLNPRSTLAPPHPSPLAAQLLNIDGVTSVF 83
Query: 56 FGYDFITVGKDQYD-WEHLRPPVLGMIMEHFISGDPIIHN-------GGLGDMKLDDMGS 107
G D ITV KD W H++P V +I E SG P+++ G G+ ++D +
Sbjct: 84 LGLDHITVTKDTSTPWAHIKPEVFAIINEFMTSGQPLVNTIADKGNEQGQGNSEVDSLA- 142
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASET 167
+ E+DS VVQ IKE+L+ R+RP++ DGGDI F+G+ DG V L +RGAC C S++ T
Sbjct: 143 --YDENDSEVVQMIKELLETRIRPSIQEDGGDIDFRGFNDGQVLLKLRGACRTCDSSTVT 200
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
LK G+ ++L H++ EVK ++ V
Sbjct: 201 LKNGIESMLMHYIEEVKGVQQV 222
>gi|115390869|ref|XP_001212939.1| HIRA-interacting protein 5 [Aspergillus terreus NIH2624]
gi|114193863|gb|EAU35563.1| HIRA-interacting protein 5 [Aspergillus terreus NIH2624]
Length = 323
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 117/201 (58%), Gaps = 12/201 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--------VEGAIHFSNAKEAEISPLASRIFSIPGIA 52
+FIQTE+TPNP LKFIP VL +E S SPLA+ + ++ G+
Sbjct: 86 IFIQTENTPNPDALKFIPNHRVLPEDFPTTFLEYLSPRSTLAPPHPSPLAANLLNVEGVT 145
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD-- 109
SV++G DFITV K +W H++P V +I + SG+ +++ + G +
Sbjct: 146 SVFYGPDFITVTKASDANWAHIKPEVFSLITQAVTSGEALVNTVAKTGEHAQEGGEEESL 205
Query: 110 -FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+ E D VV IKE+LD R+RPA+ DGGDI F+G+ +GIV L +RGAC C S++ TL
Sbjct: 206 GYNEEDDEVVSMIKELLDTRIRPAIQEDGGDIEFRGFENGIVMLKLRGACRTCDSSTVTL 265
Query: 169 KYGVANILNHFVPEVKDIRTV 189
+ G+ ++L H++ EV+ + V
Sbjct: 266 RNGIESMLMHYIEEVQGVEQV 286
>gi|68490038|ref|XP_711140.1| hypothetical protein CaO19.6283 [Candida albicans SC5314]
gi|68490075|ref|XP_711122.1| hypothetical protein CaO19.13662 [Candida albicans SC5314]
gi|46432400|gb|EAK91883.1| hypothetical protein CaO19.13662 [Candida albicans SC5314]
gi|46432419|gb|EAK91901.1| hypothetical protein CaO19.6283 [Candida albicans SC5314]
Length = 262
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 117/197 (59%), Gaps = 11/197 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAI-HFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT +TPN LKF+P +L + F + +EA SPLA ++FSI GI SV FG D
Sbjct: 32 LFIQTSETPNEQALKFLPSIKILQDNQTKEFLSGREAASSPLALKLFSIDGIRSVMFGSD 91
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD----MKLDDMGSGDFIESD 114
FIT+ K + +DW L+P + ++ E+ +G PI+ + + + +DM E D
Sbjct: 92 FITIEKSNNFDWSLLKPEIFSILTEYLTNGTPILLEDNVDEYGNSLLTNDMAIN---EDD 148
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGV 172
VV IKE++ R+RPA+ DGGDI F + DG V+L ++GAC C S+S TLK G+
Sbjct: 149 DEVVSMIKELIFTRIRPAIQDDGGDIEFVNFNEEDGTVYLRLKGACRSCDSSSVTLKNGI 208
Query: 173 ANILNHFVPEVKDIRTV 189
++L H++ EV + +
Sbjct: 209 ESMLKHYIEEVNSVEPI 225
>gi|68492023|ref|XP_710207.1| hypothetical protein CaO19.3485 [Candida albicans SC5314]
gi|46431364|gb|EAK90941.1| hypothetical protein CaO19.3485 [Candida albicans SC5314]
Length = 262
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 117/197 (59%), Gaps = 11/197 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAI-HFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT +TPN LKF+P +L + F + +EA SPLA ++FSI GI SV FG D
Sbjct: 32 LFIQTSETPNEQALKFLPSIKILQDNQTKEFLSGREAASSPLALKLFSIDGIRSVMFGSD 91
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD----MKLDDMGSGDFIESD 114
FIT+ K + +DW L+P + ++ E+ +G PI+ + + + +DM E D
Sbjct: 92 FITIEKSNNFDWSLLKPEIFSILTEYLTNGTPILLEDNVDEYGNSLLTNDMAIN---EDD 148
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGV 172
VV IKE++ R+RPA+ DGGDI F + DG V+L ++GAC C S+S TLK G+
Sbjct: 149 DEVVSMIKELIFTRIRPAIQDDGGDIEFVNFNEEDGTVYLRLKGACRSCDSSSVTLKNGI 208
Query: 173 ANILNHFVPEVKDIRTV 189
++L H++ EV + +
Sbjct: 209 ESMLKHYIEEVNSVEPI 225
>gi|281208054|gb|EFA82232.1| NIF system FeS cluster assembly domain-containing protein
[Polysphondylium pallidum PN500]
Length = 307
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 119/191 (62%), Gaps = 7/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQTE+TPNP +LKF+PG V+ G I F + K ++ISPLA+ IF + G+ V++G D
Sbjct: 96 LFIQTENTPNPDSLKFVPGIEVMPPGKTIDFPDFKSSQISPLANAIFKLDGVNRVFYGPD 155
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K +++W L+P V G I++ + S P+ L + ++ + D V
Sbjct: 156 FISVNKFPEHEWAILKPQVFGAIIDFYHSDKPL-----LSETPTNENSDTLILPEDDETV 210
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+++ RVRP + DGG+I + G++DGIV + ++G CS C S+ TLK G+ +L H
Sbjct: 211 AMIKELIETRVRPTLLDDGGNIQYLGFKDGIVLVKLQGTCSSCSSSQATLKGGIERMLMH 270
Query: 179 FVPEVKDIRTV 189
++ EV+ I V
Sbjct: 271 WISEVRGIMAV 281
>gi|145605625|ref|XP_370496.2| NifU-related protein [Magnaporthe oryzae 70-15]
gi|145013431|gb|EDJ98072.1| NifU-related protein [Magnaporthe oryzae 70-15]
Length = 319
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 119/202 (58%), Gaps = 16/202 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEAEI----SPLASRIFSIPGIA 52
+FIQTE TPN LKF+P VL E I + N + SPLA+++ +I G+
Sbjct: 74 IFIQTEPTPNSDALKFLPNHRVLPEDISTPFIEYLNPRSTIAPPYPSPLAAQLMNIDGVQ 133
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIH-------NGGLGDMKLDD 104
SV++G DFITV K +W H+RP + +I E SG I++ +G G +
Sbjct: 134 SVFYGADFITVTKASDANWAHIRPEIFSLITEAITSGQKIVNIVERTDASGEDGQETSGE 193
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSA 164
+ S + E+DS VV IKE+L+ R+RPA+ DGGDI F+G+ DG V L +RGAC C S+
Sbjct: 194 VDSLSYNENDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGNVLLKLRGACRTCDSS 253
Query: 165 SETLKYGVANILNHFVPEVKDI 186
+ TLK G+ +L H++ EV+ +
Sbjct: 254 TVTLKNGIEGMLMHYIEEVQGV 275
>gi|325187609|emb|CCA22145.1| ironsulfur cluster scaffold protein Nfulike protein putative
[Albugo laibachii Nc14]
Length = 287
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 117/196 (59%), Gaps = 14/196 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL----VEGAIHFSNAKEAEISPLASRIFSIPGIASVYF 56
MF+QTE TPNP +LKF+PG+ VL G A E SPLA ++F I GI+ V+F
Sbjct: 71 MFVQTEPTPNPNSLKFLPGKPVLDDRFTTGVDFVPGAAEIRQSPLAKKLFQIDGISRVFF 130
Query: 57 GYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDS 115
G DFI+V K D W+ LR + I++ + +G+ + + + + + D
Sbjct: 131 GKDFISVTKADDMHWDALRAEIFATIIDFYGTGEATMSDEPI-------VTDTTILPEDD 183
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVA 173
VV IKE+L+ R+RP+V DGGDI +K + GIV L + GAC+GCPS+S TLK GV
Sbjct: 184 EVVAMIKELLEQRIRPSVQDDGGDIFYKDFDVERGIVKLQLAGACAGCPSSSVTLKSGVE 243
Query: 174 NILNHFVPEVKDIRTV 189
N+L +++PEV+ I V
Sbjct: 244 NMLKYYIPEVQGIEEV 259
>gi|156044806|ref|XP_001588959.1| hypothetical protein SS1G_10507 [Sclerotinia sclerotiorum 1980]
gi|154694895|gb|EDN94633.1| hypothetical protein SS1G_10507 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 372
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 14/202 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTEDTPNP LKF+P +L I + N + SPLA+ + +I G+
Sbjct: 76 IFIQTEDTPNPDALKFLPNHPILPPSLNAPFIEYLNPRSTLAPPHPSPLAASLMNIDGVK 135
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIH----NGGLGDMKLDDMGS 107
SV++G DFITV K D +W H++P + +I E SG I++ G G+ ++ S
Sbjct: 136 SVFYGVDFITVTKADDANWAHIKPEIFSLITEAVTSGAQIVNITEKTGASGEAP-EEEDS 194
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASET 167
+ E D VV IKE+L+ R+RPA+ DGGDI ++G+ DG+V L +RGAC C S++ T
Sbjct: 195 LAYNEDDPEVVGMIKELLETRIRPAIQEDGGDIDYRGFEDGMVKLKLRGACRTCDSSTVT 254
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
LK G+ +L H++ EVK + V
Sbjct: 255 LKNGIEGMLMHYIEEVKGVVQV 276
>gi|242802638|ref|XP_002484011.1| NifU-related protein [Talaromyces stipitatus ATCC 10500]
gi|218717356|gb|EED16777.1| NifU-related protein [Talaromyces stipitatus ATCC 10500]
Length = 290
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 113/194 (58%), Gaps = 14/194 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--------VEGAIHFSNAKEAEISPLASRIFSIPGIA 52
+FIQTE TPNP LKF+P VL +E S SPLA+++ ++ G++
Sbjct: 81 IFIQTESTPNPDALKFLPNHRVLPENFPTPFLEYLSPRSTLAPPHPSPLAAKLLNVEGVS 140
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG--- 108
SV++G DFITV K +W H++P V +I E SG+PI++ D G
Sbjct: 141 SVFYGPDFITVTKQSDVNWAHIKPEVFSLITEVVTSGEPIVNTVERTSGAQDAQEGGGED 200
Query: 109 --DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ E D VV IKE+L+ R+RPA+ DGGDI F+G+ +GIV L +RGAC C S++
Sbjct: 201 TLSYNEEDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFENGIVLLKLRGACRTCDSSTV 260
Query: 167 TLKYGVANILNHFV 180
TLK G+ ++L H+V
Sbjct: 261 TLKNGIESMLMHYV 274
>gi|238880174|gb|EEQ43812.1| HIRA-interacting protein 5 [Candida albicans WO-1]
Length = 262
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 115/191 (60%), Gaps = 11/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAI-HFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT +TPN LKF+P +L + F + +EA SPLA ++FSI GI SV FG D
Sbjct: 32 LFIQTSETPNEQALKFLPSIKILQDNQTKEFLSGREAASSPLALKLFSIDGIRSVMFGSD 91
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD----MKLDDMGSGDFIESD 114
FIT+ K + +DW L+P + ++ E+ +G PI+ + + + +DM E D
Sbjct: 92 FITIEKSNNFDWSLLKPEIFSILTEYLTNGTPILLEDNVDEYGNSLLTNDMAIN---EDD 148
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGV 172
VV IKE++ R+RPA+ DGGDI F + DG V+L ++GAC C S+S TLK G+
Sbjct: 149 DEVVSMIKELIFTRIRPAIQDDGGDIEFVNFNEEDGTVYLRLKGACRSCDSSSVTLKNGI 208
Query: 173 ANILNHFVPEV 183
++L H++ EV
Sbjct: 209 ESMLKHYIEEV 219
>gi|261194942|ref|XP_002623875.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis SLH14081]
gi|239587747|gb|EEQ70390.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis SLH14081]
Length = 318
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 120/200 (60%), Gaps = 12/200 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--------VEGAIHFSNAKEAEISPLASRIFSIPGIA 52
+FIQTE TPN LKF P VL VE S SPLA+++ ++ G++
Sbjct: 82 IFIQTETTPNADALKFNPNHPVLPENFPTSFVEYLSPRSTLTPPYPSPLAAKLLNVDGVS 141
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH--NGGLGDMKLDDMGSGD 109
+V++G DFIT+ K +W H++P V +I E +G+PII+ G G ++ S
Sbjct: 142 AVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTTGEPIINVAEAGAGGPPPEE-DSLS 200
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ E D VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ TLK
Sbjct: 201 YNEDDDEVVSMIKELLETRIRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLK 260
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ ++L H++ EVK++ V
Sbjct: 261 NGIESMLMHYIEEVKEVNHV 280
>gi|239610759|gb|EEQ87746.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis ER-3]
Length = 318
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 120/200 (60%), Gaps = 12/200 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--------VEGAIHFSNAKEAEISPLASRIFSIPGIA 52
+FIQTE TPN LKF P VL VE S SPLA+++ ++ G++
Sbjct: 82 IFIQTETTPNADALKFNPNHPVLPENFPTSFVEYLSPRSTLTPPYPSPLAAKLLNVDGVS 141
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH--NGGLGDMKLDDMGSGD 109
+V++G DFIT+ K +W H++P V +I E +G+PII+ G G ++ S
Sbjct: 142 AVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTTGEPIINVAEAGAGGPPPEE-DSLS 200
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ E D VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ TLK
Sbjct: 201 YNEDDDEVVSMIKELLETRIRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLK 260
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ ++L H++ EVK++ V
Sbjct: 261 NGIESMLMHYIEEVKEVNHV 280
>gi|327348799|gb|EGE77656.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis ATCC 18188]
Length = 318
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 120/200 (60%), Gaps = 12/200 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--------VEGAIHFSNAKEAEISPLASRIFSIPGIA 52
+FIQTE TPN LKF P VL VE S SPLA+++ ++ G++
Sbjct: 82 IFIQTETTPNADALKFNPNHPVLPENFPTSFVEYLSPRSTLTPPYPSPLAAKLLNVDGVS 141
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH--NGGLGDMKLDDMGSGD 109
+V++G DFIT+ K +W H++P V +I E +G+PII+ G G ++ S
Sbjct: 142 AVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTTGEPIINVAEAGAGGPPPEE-DSLS 200
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ E D VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ TLK
Sbjct: 201 YNEDDDEVVSMIKELLETRIRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLK 260
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ ++L H++ EVK++ V
Sbjct: 261 NGIESMLMHYIEEVKEVNHV 280
>gi|302927119|ref|XP_003054431.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735372|gb|EEU48718.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 309
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 13/202 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE TPNP LKF+P V+ EG I + N + SPLA+++ +I G+
Sbjct: 76 IFIQTEGTPNPDALKFLPNHRVVPEGISTPFIEYLNPRATISPPHPSPLAAKLMNIDGVT 135
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD-- 109
SV++G DFITV K +W H+RP + +I E SG+ +++ + + D
Sbjct: 136 SVFYGADFITVTKAADANWAHIRPEIFALITEAITSGETLVNVAERREGETHPEAEEDSL 195
Query: 110 -FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASET 167
+ E DS VV IKE+L+ R+RPA+ DGGDI F+G+ D G V L +RGAC C S++ T
Sbjct: 196 AYNEDDSEVVGMIKELLETRIRPAIQEDGGDIDFRGFDDEGYVHLRLRGACRTCDSSTVT 255
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
LK G+ +L H++ EVK ++ V
Sbjct: 256 LKNGIEGMLMHYIEEVKGVKQV 277
>gi|254455619|ref|ZP_05069048.1| nitrogen-fixing NifU domain protein [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082621|gb|EDZ60047.1| nitrogen-fixing NifU domain protein [Candidatus Pelagibacter sp.
HTCC7211]
Length = 179
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 118/189 (62%), Gaps = 16/189 (8%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MF+QTE TPNP +LKF+PG+ V G + K+ + L I SI G+ ++ G DF
Sbjct: 1 MFVQTEVTPNPNSLKFLPGKKVSNSGPFEIT-KKDGIKNDLVRNILSINGVEGIFLGEDF 59
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPII--HNGGLGDMKLDDMGSGDFIESDSAV 117
I+V K D+ +W+ ++ V+ +I + + G + + D LD+ +
Sbjct: 60 ISVNKNDEINWDEIKHIVISLINDFYSDGKEFVIDEDAEQSDDNLDE------------I 107
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
Q+I ++LD ++RPAVARDGGDI FK ++DG+V + ++G+CSGCPS++ TLK GV N+L
Sbjct: 108 EQKIVKILDQKIRPAVARDGGDIKFKEFKDGVVKVQLQGSCSGCPSSTMTLKQGVQNLLC 167
Query: 178 HFVPEVKDI 186
H++PEVK++
Sbjct: 168 HYLPEVKEV 176
>gi|154291187|ref|XP_001546179.1| NifU-like protein [Botryotinia fuckeliana B05.10]
gi|150847081|gb|EDN22274.1| NifU-like protein [Botryotinia fuckeliana B05.10]
Length = 313
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 122/202 (60%), Gaps = 15/202 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEAEI----SPLASRIFSIPGIA 52
+FIQTEDTPNP LKF+P ++ + I + N + SPLA+ + +I G+
Sbjct: 76 IFIQTEDTPNPDALKFLPNHPIIPQDVNSPFIEYLNPRSTLAPPYPSPLAASLMNIDGVK 135
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIH----NGGLGDMKLDDMGS 107
SV++G +FITV K + +W H++P V +I E SG I++ G G+ + +D S
Sbjct: 136 SVFYGANFITVTKVEDANWAHIKPEVFSLITEAVTSGAQIVNITERTGASGEPEEED--S 193
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASET 167
+ E D VV IKE+L+ R+RPA+ DGGDI ++G+ DG+V L +RGAC C S++ T
Sbjct: 194 LAYNEDDPEVVGMIKELLETRIRPAIQEDGGDIDYRGFEDGLVKLKLRGACRTCDSSTVT 253
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
LK G+ +L H++ EVK + V
Sbjct: 254 LKNGIEGMLMHYIEEVKGVVQV 275
>gi|4836948|gb|AAD30650.1|AC006085_23 Similar to human CGI-33 protein [Arabidopsis thaliana]
Length = 304
Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 120/219 (54%), Gaps = 37/219 (16%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGI--------- 51
MFIQT+ TPNP++L F PG+ V+ G+ F N++ A SPLA IF+I GI
Sbjct: 75 MFIQTQSTPNPSSLMFSPGKPVMEIGSADFPNSRSAMSSPLAKAIFAIDGIPRLLLQHTI 134
Query: 52 --------------------ASVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDP 90
V++G DF+TV K D W+ L+P + ++M+ + SG P
Sbjct: 135 VSSSYNPCFVTKIVSVDAGVVRVFYGSDFVTVTKSDDVTWDILKPDIFAVVMDFYSSGQP 194
Query: 91 IIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDG 148
+ + K + E DS V IKE+L+ R+RP+V DGGDI + G+ G
Sbjct: 195 LFLDSQATAAKDTAIH-----EDDSETVAMIKELLETRIRPSVQDDGGDIEYCGFDTETG 249
Query: 149 IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
IV L M+GACSGCPS+S TLK G+ N+L H+V EVK +
Sbjct: 250 IVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGVE 288
>gi|171689560|ref|XP_001909720.1| hypothetical protein [Podospora anserina S mat+]
gi|170944742|emb|CAP70853.1| unnamed protein product [Podospora anserina S mat+]
Length = 323
Score = 147 bits (371), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 119/207 (57%), Gaps = 18/207 (8%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--------VEGAIHFSNAKEAEISPLASRIFSIPGIA 52
+FIQTE TPN +LKF+P VL VE S SPLA+ + ++ G+
Sbjct: 77 IFIQTEPTPNANSLKFLPNHPVLPESISTPFVEYLSPRSTISPPYPSPLAANLMNVDGVT 136
Query: 53 SVYFGYDFITVGKDQYD-WEHLRPPVLGMIMEHFISGDPIIH---------NGGLGDMKL 102
SV++G DFITV K W H+RP + +I E SG P+++ + + +
Sbjct: 137 SVFYGQDFITVTKSADAVWAHIRPEIFSLITEAITSGQPLVNISQQSASSPSTAEQEQES 196
Query: 103 DDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCP 162
+ S ++ E+DS VV IKE+L+ R+RPA+ DGGDI F+G+ +GIV L +RGAC C
Sbjct: 197 GERDSLEYDENDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFENGIVMLKLRGACRTCD 256
Query: 163 SASETLKYGVANILNHFVPEVKDIRTV 189
S++ TLK G+ +L H++ EV+ + V
Sbjct: 257 SSTVTLKNGIEGMLMHYIEEVQGVEQV 283
>gi|289620358|emb|CBI53216.1| unnamed protein product [Sordaria macrospora]
Length = 290
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 112/195 (57%), Gaps = 29/195 (14%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+FIQTE+TPNP +LKF+P +++ +I G+ SV++G DF
Sbjct: 78 IFIQTENTPNPDSLKFLPN-----------------------TKLMNIDGVTSVFYGTDF 114
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-----NGGLGDMKLDDMGSGDFIESD 114
ITV K +W H+RP V +I E SG I++ G + D+ S + E+D
Sbjct: 115 ITVTKSADANWAHIRPEVFALITETITSGQTIVNVVERREGEENTQESDEKDSLAYDEND 174
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
S VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ TLK G+
Sbjct: 175 SEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGIVKLKLRGACRTCDSSTVTLKNGIEG 234
Query: 175 ILNHFVPEVKDIRTV 189
+L H++ EV+ + V
Sbjct: 235 MLMHYIEEVQGVEQV 249
>gi|260951229|ref|XP_002619911.1| hypothetical protein CLUG_01070 [Clavispora lusitaniae ATCC 42720]
gi|238847483|gb|EEQ36947.1| hypothetical protein CLUG_01070 [Clavispora lusitaniae ATCC 42720]
Length = 243
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 121/195 (62%), Gaps = 13/195 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAI-HFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT +TPN LKF+P +L E F + +EA ISPLA ++FS+ G+ S+ G +
Sbjct: 23 LFIQTAETPNENALKFLPSTKLLQENETREFLSGREAVISPLAMKLFSVDGVKSIMLGSN 82
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKL-DDMGSGDFIESDSA 116
FIT+ K D +W L+P + ++ E +G PII + D +L +DM F E D
Sbjct: 83 FITIEKSTDDIEWAVLKPEIFSILTEFLTNGTPIISD----DAQLTNDM---QFSEDDDE 135
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVAN 174
+V IKE++ R+RPA+ DGGDI F + + G+V+L ++GAC C S+S TLK G+ +
Sbjct: 136 IVSMIKELIFTRIRPAIQDDGGDIEFVSFEENTGVVYLRLKGACRSCDSSSVTLKNGIES 195
Query: 175 ILNHFVPEVKDIRTV 189
+L +++ EV+++R V
Sbjct: 196 MLKYYIEEVQEVRPV 210
>gi|145228927|ref|XP_001388772.1| nifU-related protein [Aspergillus niger CBS 513.88]
gi|134054866|emb|CAK36880.1| unnamed protein product [Aspergillus niger]
Length = 330
Score = 147 bits (370), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 118/201 (58%), Gaps = 12/201 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHF-------SNAKEAEISPLASRIFSIPGIA 52
+FIQTE+TPNP LKFIP VL E F S SPLA+ + ++ G+
Sbjct: 89 IFIQTENTPNPDALKFIPNHRVLPENFPTTFLEYLSPRSTLAPPHPSPLAASLLNVDGVT 148
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHN---GGLGDMKLDDMGSG 108
SV++G DFITV K +W H++P + +I + SG+ I++ G + + S
Sbjct: 149 SVFYGPDFITVTKATDSNWAHIKPEIFSLITQAVTSGEAIVNTVAKTGESGQEGGESESL 208
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+ E + V+ IKE+LD R+RPA+ DGGDI F+G+ +GIV L +RGAC C S++ TL
Sbjct: 209 AYEEEEDEVIGMIKELLDTRIRPAIQEDGGDIEFRGFENGIVLLKLRGACRTCDSSTVTL 268
Query: 169 KYGVANILNHFVPEVKDIRTV 189
+ G+ ++L H++ EV+ + V
Sbjct: 269 RNGIESMLMHYIEEVQGVEQV 289
>gi|46107542|ref|XP_380830.1| hypothetical protein FG00654.1 [Gibberella zeae PH-1]
Length = 304
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 122/204 (59%), Gaps = 17/204 (8%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE+TPNP LKF+P V+ E I + N + SPLA+++ +I G+
Sbjct: 74 IFIQTENTPNPDALKFLPNHRVVPEEFSTPFIEYLNPRATISPPHPSPLAAKLMNIDGVT 133
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPII-----HNGGLGDMKLDDMG 106
SV++G DFITV K +W H+RP + +I E +G+ I+ G G +D
Sbjct: 134 SVFYGADFITVTKAADANWAHIRPEIFALITEAITAGEQIVTISERREGEAGAPVEED-- 191
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSAS 165
S + E+DS VV IKE+L+ R+RPA+ DGGDI F+G+ D G V L +RGAC C S++
Sbjct: 192 SLAYNENDSEVVGMIKELLETRIRPAIQEDGGDIDFRGFDDEGYVHLRLRGACRTCDSST 251
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TLK G+ +L H++ EVK ++ V
Sbjct: 252 VTLKNGIEGMLMHYIEEVKGVKQV 275
>gi|119189821|ref|XP_001245517.1| hypothetical protein CIMG_04958 [Coccidioides immitis RS]
Length = 325
Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 120/203 (59%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--------VEGAIHFSNAKEAEISPLASRIFSIPGIA 52
+FIQTE TPN LKFIP VL +E S SPLA+++ ++ G++
Sbjct: 81 IFIQTEVTPNADALKFIPNYPVLPENFPAPFLEYLSPRSTLAAPHPSPLAAKLLNVDGVS 140
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD-MKLDDMGSGD- 109
SV++G DFIT+ K +W H++P V +I E SG+ +++ + + + GSG+
Sbjct: 141 SVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTSGEQLVNTVAVAEGAQAGQEGSGEE 200
Query: 110 ---FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ E D VV I E+L+ R+RPA+ DGGDI F+G++DG V L +RGAC C S++
Sbjct: 201 AVEYNEEDEEVVGMINELLETRIRPAIQEDGGDIEFRGFKDGNVMLKLRGACRTCDSSTV 260
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ ++L H++ EVK + V
Sbjct: 261 TLKNGIESMLMHYIEEVKSVTQV 283
>gi|303322791|ref|XP_003071387.1| NifU-like domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240111089|gb|EER29242.1| NifU-like domain containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 325
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 119/203 (58%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--------VEGAIHFSNAKEAEISPLASRIFSIPGIA 52
+FIQTE TPN LKFIP VL +E S SPLA+++ ++ G++
Sbjct: 81 IFIQTEVTPNADALKFIPNYPVLPENFPAPFLEYLSPRSTLAAPHPSPLAAKLLNVDGVS 140
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD-MKLDDMGSGD- 109
SV++G DFIT+ K +W H++P V +I E SG+ +++ + + GSG+
Sbjct: 141 SVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTSGEQLVNTVAVAEGAHAGQEGSGEE 200
Query: 110 ---FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ E D VV I E+L+ R+RPA+ DGGDI F+G++DG V L +RGAC C S++
Sbjct: 201 AVEYNEEDEEVVGMINELLETRIRPAIQEDGGDIEFRGFKDGNVMLKLRGACRTCDSSTV 260
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ ++L H++ EVK + V
Sbjct: 261 TLKNGIESMLMHYIEEVKSVTQV 283
>gi|76155328|gb|AAX26597.2| SJCHGC03039 protein [Schistosoma japonicum]
Length = 222
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 111/177 (62%), Gaps = 8/177 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+FIQ ++TPNP +LK+ PGQ VL G F + K+A SPLA ++F I G+ V+FG DF
Sbjct: 53 LFIQAQETPNPNSLKYFPGQAVLGSGTRDFPSRKQAGSSPLARQLFRIEGVEQVFFGPDF 112
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
IT+ K+ ++W ++P V IM+ + SG P+I S E D V
Sbjct: 113 ITITKNNDFEWAVIKPDVYATIMDFYSSGQPVIDEE-------KSQESDKPCEVDDETVL 165
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+LD R+RP V DGGDI++KG++DGIV L ++G+CS CPS+ TLK GV N+L
Sbjct: 166 MIKELLDTRIRPTVQEDGGDIIYKGFKDGIVLLKLQGSCSSCPSSVVTLKNGVQNML 222
>gi|320032859|gb|EFW14809.1| NifU family protein [Coccidioides posadasii str. Silveira]
Length = 325
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 119/203 (58%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--------VEGAIHFSNAKEAEISPLASRIFSIPGIA 52
+FIQTE TPN LKFIP VL +E S SPLA+++ ++ G++
Sbjct: 81 IFIQTEVTPNADALKFIPNYPVLPENFPAPFLEYLSPRSTLAAPHPSPLAAKLLNVDGVS 140
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD-MKLDDMGSGD- 109
SV++G DFIT+ K +W H++P V +I E SG+ +++ + + GSG+
Sbjct: 141 SVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTSGEQLVNTVAVAEGAHAGQEGSGEE 200
Query: 110 ---FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ E D VV I E+L+ R+RPA+ DGGDI F+G++DG V L +RGAC C S++
Sbjct: 201 AVEYNEEDEEVVGMINELLETRIRPAIQEDGGDIEFRGFKDGNVMLKLRGACRTCDSSTV 260
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ ++L H++ EVK + V
Sbjct: 261 TLKNGIESMLMHYIEEVKSVTQV 283
>gi|296223650|ref|XP_002757718.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Callithrix jacchus]
Length = 235
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 114/192 (59%), Gaps = 13/192 (6%)
Query: 2 FIQTEDTPNPATL-KFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
F+Q P PA +PG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 40 FVQRPLFPLPAAFCNPVPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 99
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF-IESDSAV 117
ITV K+ + DW L+P + IM+ F SG P++ ++ SG+ E D V
Sbjct: 100 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVT---------EETPSGEAGSEEDDEV 150
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 151 VAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ 210
Query: 178 HFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 211 FYIPEVEGVEQV 222
>gi|42523787|ref|NP_969167.1| nifU related protein [Bdellovibrio bacteriovorus HD100]
gi|39575994|emb|CAE80160.1| nifU related protein [Bdellovibrio bacteriovorus HD100]
Length = 186
Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 114/185 (61%), Gaps = 11/185 (5%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TPNPAT+KF+ + V +G +EAE SPLA++IF P +SVY G DFITV K
Sbjct: 12 EPTPNPATMKFLLHKKVTDQG-FDCPTVQEAERSPLAAKIFGFPWTSSVYVGPDFITVTK 70
Query: 66 -DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEV 124
D DWE L P+ G+I EH +P++ + + + + E+DS +V+ IK V
Sbjct: 71 QDWVDWELLAHPLSGLIQEHLDRDEPVV---------VTFVEAEEDNENDSPMVRNIKSV 121
Query: 125 LDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVK 184
L+ +RP VA DGGDIVF Y + ++++ M+GACSGCPS++ TLK G+ + PE+
Sbjct: 122 LNREIRPVVALDGGDIVFHKYENNVLYIHMKGACSGCPSSTVTLKEGIEVRMKELFPEIV 181
Query: 185 DIRTV 189
++ +V
Sbjct: 182 EVVSV 186
>gi|154281411|ref|XP_001541518.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411697|gb|EDN07085.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 279
Score = 144 bits (362), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 116/199 (58%), Gaps = 10/199 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--------VEGAIHFSNAKEAEISPLASRIFSIPGIA 52
+FIQTE TPN LKF P VL VE S SPLA+++ ++ G++
Sbjct: 44 IFIQTETTPNADALKFNPNHPVLPENFPTSFVEYLSPRSTLTPPYPSPLAAKLLNVDGVS 103
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-NGGLGDMKLDDMGSGDF 110
+V++G DFIT+ K +W H++P V +I E +G+PII+ + S +
Sbjct: 104 AVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTTGEPIINVAEAGAGAGPAEEDSLSY 163
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
E D VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ TLK
Sbjct: 164 NEDDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKN 223
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ ++L H++ EVK + V
Sbjct: 224 GIESMLMHYIEEVKGVNHV 242
>gi|240279904|gb|EER43409.1| HIRA-interacting protein [Ajellomyces capsulatus H143]
gi|325093032|gb|EGC46342.1| HIRA-interacting protein [Ajellomyces capsulatus H88]
Length = 314
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 116/199 (58%), Gaps = 10/199 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--------VEGAIHFSNAKEAEISPLASRIFSIPGIA 52
+FIQTE TPN LKF P VL VE S SPLA+++ ++ G++
Sbjct: 79 IFIQTETTPNADALKFNPNHPVLPENFPTSFVEYLSPRSTLTPPYPSPLAAKLLNVDGVS 138
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-NGGLGDMKLDDMGSGDF 110
+V++G DFIT+ K +W H++P V +I E +G+PII+ + S +
Sbjct: 139 AVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTTGEPIINVAEAGAGAGPAEEDSLSY 198
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
E D VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ TLK
Sbjct: 199 NEDDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKN 258
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ ++L H++ EVK + V
Sbjct: 259 GIESMLMHYIEEVKGVNHV 277
>gi|221104801|ref|XP_002157169.1| PREDICTED: similar to HIRA interacting protein 5 [Hydra
magnipapillata]
Length = 267
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 119/196 (60%), Gaps = 16/196 (8%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+ +DTPNP +LKFIPG VL G + F SPLA ++F I G+ S++FG DF
Sbjct: 59 MFIRVQDTPNPNSLKFIPGCKVLESGTVDFPTPSHGYRSPLARQLFRIKGVRSIFFGKDF 118
Query: 61 ITVGK---DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI--ESDS 115
IT+ K D W L+P + +IM+ F S P++ DD+ + D I E D+
Sbjct: 119 ITISKSDDDDVSWVLLKPDIYAVIMDFFASNLPVLT---------DDVPAQDTIAAEDDN 169
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVA 173
V IKE+LD R+RP V DGGDI+FKG+ GIV L ++G+CS CPS+S TLK GV
Sbjct: 170 ETVLLIKELLDTRIRPTVQEDGGDIIFKGFDSVSGIVKLKLQGSCSSCPSSSVTLKNGVQ 229
Query: 174 NILNHFVPEVKDIRTV 189
N++ ++PEV + V
Sbjct: 230 NMMQFYIPEVTGVEEV 245
>gi|225563079|gb|EEH11358.1| HIRA-interacting protein [Ajellomyces capsulatus G186AR]
Length = 314
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 116/199 (58%), Gaps = 10/199 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--------VEGAIHFSNAKEAEISPLASRIFSIPGIA 52
+FIQTE TPN LKF P VL VE S SPLA+++ ++ G++
Sbjct: 79 IFIQTETTPNADALKFNPNHPVLPENFPTSFVEYLSPRSTLTPPYPSPLAAKLLNVDGVS 138
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-NGGLGDMKLDDMGSGDF 110
+V++G DFIT+ K +W H++P V +I E +G+PII+ + S +
Sbjct: 139 AVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTTGEPIINVAEAGAGAGPAEEDSLSY 198
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
E D VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ TLK
Sbjct: 199 NEDDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKN 258
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ ++L H++ EVK + V
Sbjct: 259 GIESMLMHYIEEVKGVNHV 277
>gi|116199405|ref|XP_001225514.1| hypothetical protein CHGG_07858 [Chaetomium globosum CBS 148.51]
gi|88179137|gb|EAQ86605.1| hypothetical protein CHGG_07858 [Chaetomium globosum CBS 148.51]
Length = 337
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 121/211 (57%), Gaps = 22/211 (10%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE TPN LKF+P +L G I + N + SPLA+++ +I G+
Sbjct: 86 IFIQTESTPNADALKFLPNHQILPAGLTTPFIEYLNPRATIAPPHPSPLAAQLMNIDGVT 145
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIH-------------NGGLG 98
+V++G DFITV K +W H+RP V +I E SG PI++ G G
Sbjct: 146 AVFYGADFITVTKAADANWAHVRPEVFALITEAITSGQPIVNVAERKEGGGGVGGAAGEG 205
Query: 99 DMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGAC 158
+ ++ S + E+DS VV IKE+L+ RVRPA+ DGGDI F+G+ +G V L +RGAC
Sbjct: 206 EGAAEEKDSLAYDENDSEVVGMIKELLETRVRPAIQEDGGDIEFRGFENGYVMLKLRGAC 265
Query: 159 SGCPSASETLKYGVANILNHFVPEVKDIRTV 189
C S++ TLK G+ +L H++ EV+ + V
Sbjct: 266 RTCDSSTVTLKNGIEGMLMHYIEEVQGVHQV 296
>gi|323451223|gb|EGB07101.1| hypothetical protein AURANDRAFT_54041 [Aureococcus anophagefferens]
Length = 232
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 115/198 (58%), Gaps = 15/198 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE-----GAIHFSNAKEAEI-SPLASRIFSIPGIASV 54
+FIQ E TPNP +LKF+P Q VL E HF + SPLA ++F+I G+ +
Sbjct: 18 VFIQVEKTPNPFSLKFVPSQAVLGEEHQDKSGFHFHRGDTEYLRSPLAKKLFAIDGVTGI 77
Query: 55 YFGYDFITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES 113
+ DF+TV K++ W ++P V G IM+ + G P + + L +
Sbjct: 78 FLARDFVTVSKNEDGAWATIKPHVFGHIMDFYAEGLPAVEDA------LPAASDTLITDD 131
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYG 171
DS VV IKE+++ R+RPAV DGGDI F+G+ + G+V + + G+C GCPS+S TL+ G
Sbjct: 132 DSEVVAMIKELVEARIRPAVQEDGGDIFFRGFDEATGVVKVELAGSCVGCPSSSVTLRNG 191
Query: 172 VANILNHFVPEVKDIRTV 189
V N+L H++ EVK I V
Sbjct: 192 VENMLMHYIAEVKAIENV 209
>gi|108761437|ref|YP_634156.1| NifU family protein [Myxococcus xanthus DK 1622]
gi|108465317|gb|ABF90502.1| NifU family protein [Myxococcus xanthus DK 1622]
Length = 188
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 117/189 (61%), Gaps = 7/189 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYDFI 61
IQ E TPNP+TLK++ + +L GA++F+N ++A+ SPLA ++ + G+ +V G +F+
Sbjct: 5 IQLEWTPNPSTLKYVVDRRLLAGGAVNFTNPEDAQAKSPLARKLMDVRGVTAVMIGTNFV 64
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
TV K ++ +W+ L V+ + H + +P++ L + SG V R
Sbjct: 65 TVTKGEEGEWDELNDEVMSALDTHLTANEPVVDEAALAAAREAAGPSGG-----GTVEGR 119
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I+++LDN +RPAVA DGGDI + DGIV+L M+GAC+GCPS++ TLK G+ L +
Sbjct: 120 IQDILDNEIRPAVAMDGGDITLDRFEDGIVYLHMKGACAGCPSSTATLKMGIEGRLREMI 179
Query: 181 PEVKDIRTV 189
PEV ++ +V
Sbjct: 180 PEVLEVVSV 188
>gi|190345080|gb|EDK36900.2| hypothetical protein PGUG_00997 [Meyerozyma guilliermondii ATCC
6260]
Length = 236
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 113/187 (60%), Gaps = 15/187 (8%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT DTPN LKF+P +L E + F + +EA SPLA ++FS+ GI SV FG +
Sbjct: 27 LFIQTADTPNEHALKFLPSMSILKENETLEFLSGREAARSPLAVKLFSVDGIKSVMFGSN 86
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGG--LGDMKLDDMGSGDFIESDS 115
FIT+ K + W ++P + ++ EH +G P+I++ DM+++ E D
Sbjct: 87 FITIEKSANSNQWAVMKPEIFSILTEHLTTGAPVINDEYELSNDMEIN--------EDDD 138
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVA 173
VV IKE++ R+RPA+ DGGDI F + + G V+L ++GAC C S+S TLK G+
Sbjct: 139 EVVAMIKELIFTRIRPAIQEDGGDIEFAKFDEDSGTVYLKLKGACRSCESSSVTLKNGIE 198
Query: 174 NILNHFV 180
++L H++
Sbjct: 199 SMLKHYI 205
>gi|320585764|gb|EFW98443.1| NifU [Grosmannia clavigera kw1407]
Length = 370
Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 119/210 (56%), Gaps = 26/210 (12%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEAEI-----SPLASRIFSIPGIASVY 55
TE TPN +KF+P VL EG I + + + A I SPLA+++ ++ G+ +V+
Sbjct: 121 TESTPNADAIKFLPNHQVLPEGIASPFIEYLSPR-ATIAPPYPSPLAAQLMNVDGVTAVF 179
Query: 56 FGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDM----GSG-- 108
+G DFITV K +W H+RP V +I E SG I+ G + + G G
Sbjct: 180 YGSDFITVTKATDANWAHIRPEVFALITEAITSGQAIVRPSATGSAGAEGVDGTHGEGAE 239
Query: 109 ---------DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACS 159
+ E+DS VV IKE+L+ R+RPA+ DGGDI F+G+ DG V L +RGAC
Sbjct: 240 AEAVHEDSLQYNENDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGEVLLKLRGACR 299
Query: 160 GCPSASETLKYGVANILNHFVPEVKDIRTV 189
C S++ TLK G+ ++L H++ EVK +R V
Sbjct: 300 TCDSSTVTLKNGIESMLMHYIEEVKVVRQV 329
>gi|296817809|ref|XP_002849241.1| HIRA-interacting protein 5 [Arthroderma otae CBS 113480]
gi|238839694|gb|EEQ29356.1| HIRA-interacting protein 5 [Arthroderma otae CBS 113480]
Length = 304
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 120/203 (59%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHF-------SNAKEAEISPLASRIFSIPGIA 52
+FI+T+ TPN LKF P VL EG + F S + SPLA+++ ++ G+
Sbjct: 72 IFIETDTTPNADALKFRPNHPVLPEGFPVSFLEYLTPRSTLQPPYPSPLAAKLLNVDGVV 131
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIH-----NGGLGDMKLDDMG 106
SV+FG DFITV KD +W H++P V +I E +G+ +I+ G G + +
Sbjct: 132 SVFFGSDFITVTKDSDANWAHIKPEVFSLITEAITTGEALINIVDVRPGKEGAEEAEMEE 191
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ + E D +V I+E+L+ R+RPA+ DGGDI F+G+ +G V L +RGAC C S++
Sbjct: 192 AVRYNEEDEEIVGMIQELLETRIRPAIQEDGGDIEFRGFENGNVMLKLRGACRTCDSSTV 251
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ ++L H++ EVK + V
Sbjct: 252 TLKNGIESMLMHYIEEVKSVTQV 274
>gi|254566581|ref|XP_002490401.1| Protein involved in iron metabolism in mitochondria [Pichia
pastoris GS115]
gi|238030197|emb|CAY68120.1| Protein involved in iron metabolism in mitochondria [Pichia
pastoris GS115]
Length = 249
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 112/195 (57%), Gaps = 11/195 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA-IHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT+ TPN LKF+P +L E I F N ++A SPLA ++F I G+ ++ G+D
Sbjct: 21 LFIQTQTTPNDDALKFLPSMKILPEQTTIEFLNGRQAFKSPLALKLFGIDGVKTIMIGHD 80
Query: 60 FITV-GKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA-- 116
FITV K Q DW L+P + ++ E +G P+ L + D +E D
Sbjct: 81 FITVEKKTQDDWSLLKPEIFAVLTESLNNGTPV-----LNEQHQSDANDQALLEEDDEDE 135
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFK--GYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
VV +KE++ R+RPA+ DGGDI F Y G V+L +RGAC C S+S TLK G+ +
Sbjct: 136 VVSMVKELIFTRIRPAIQDDGGDIEFVRFEYETGTVYLRLRGACRSCSSSSITLKNGIES 195
Query: 175 ILNHFVPEVKDIRTV 189
+L H++ EV+ + +
Sbjct: 196 MLKHYIEEVEAVEQI 210
>gi|146423384|ref|XP_001487621.1| hypothetical protein PGUG_00997 [Meyerozyma guilliermondii ATCC
6260]
Length = 236
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 113/187 (60%), Gaps = 15/187 (8%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT DTPN LKF+P +L E + F + +EA SPLA ++FS+ GI SV FG +
Sbjct: 27 LFIQTADTPNEHALKFLPSMSILKENETLEFLSGREAARSPLAVKLFSVDGIKSVMFGSN 86
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGG--LGDMKLDDMGSGDFIESDS 115
FIT+ K + W ++P + ++ EH +G P+I++ DM+++ E D
Sbjct: 87 FITIEKLANSNQWAVMKPEIFLILTEHLTTGAPVINDEYELSNDMEIN--------EDDD 138
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVA 173
VV IKE++ R+RPA+ DGGDI F + + G V+L ++GAC C S+S TLK G+
Sbjct: 139 EVVAMIKELIFTRIRPAIQEDGGDIEFAKFDEDSGTVYLKLKGACRSCESSSVTLKNGIE 198
Query: 174 NILNHFV 180
++L H++
Sbjct: 199 SMLKHYI 205
>gi|219130127|ref|XP_002185224.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403403|gb|EEC43356.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 195
Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 116/197 (58%), Gaps = 18/197 (9%)
Query: 1 MFIQTEDTPNPATLKFIP-GQVVLVEG-------AIHFSNAKEAEISPLASRIFSIPGIA 52
+FIQT DTPNP +LKF+P G VL + AKE SPLA +F + G+
Sbjct: 6 IFIQTADTPNPESLKFVPTGVAVLTDNPDGNGFYVTKNDPAKEILRSPLAKSLFDVEGVK 65
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI 111
+VY G DF+TV K ++ W+ LRP + ++M S P + +++ ++ +
Sbjct: 66 AVYLGGDFVTVTKYAEHKWKILRPQLFDVLMNWADSEKPAL-------LEMPEITDTTIM 118
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLK 169
E D +V IKE++++R+RPAV DGGDI + + + GIV + + G+C GCPS+S TLK
Sbjct: 119 EDDDEIVAMIKELIESRIRPAVQEDGGDIRYVSFEEETGIVTVELAGSCVGCPSSSVTLK 178
Query: 170 YGVANILNHFVPEVKDI 186
GV N+L H++PEV +
Sbjct: 179 QGVENMLMHYIPEVSSV 195
>gi|302657114|ref|XP_003020287.1| hypothetical protein TRV_05641 [Trichophyton verrucosum HKI 0517]
gi|291184105|gb|EFE39669.1| hypothetical protein TRV_05641 [Trichophyton verrucosum HKI 0517]
Length = 304
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 117/203 (57%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHF-------SNAKEAEISPLASRIFSIPGIA 52
+FI+T+ TPN LKF P VL EG + F S + SPLA+++ ++ G
Sbjct: 72 IFIETDTTPNADALKFRPNHPVLPEGFPVSFLEYLTPRSTLQPPYPSPLAAKLLNVDGAV 131
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIH-----NGGLGDMKLDDMG 106
SV+FG DFITV KD +W H++P + +I E G+ +++ G G +
Sbjct: 132 SVFFGSDFITVTKDSDANWAHIKPEIFSLITEAITRGEALVNVVDVRQGKEGAEGAEAEE 191
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ + E D VV I+E+L+ R+RPA+ DGGDI F+G+ +G V L +RGAC C S++
Sbjct: 192 AVRYNEEDEEVVGMIQELLETRIRPAIQEDGGDIEFRGFENGNVLLKLRGACRTCDSSTV 251
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ ++L H++ EVK + V
Sbjct: 252 TLKNGIESMLMHYIEEVKSVTQV 274
>gi|299469630|emb|CBN76484.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 282
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 116/195 (59%), Gaps = 14/195 (7%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVE---GAIHFS-NAKEAEISPLASRIFSIPGIASVYFG 57
FIQTE TPNP +LKF+PG+ VL ++F+ + +E SPLA + S+ G+A V+ G
Sbjct: 66 FIQTEPTPNPNSLKFLPGRPVLPAEHGTGVYFTPDDREKSQSPLAVALLSLEGVAGVFLG 125
Query: 58 YDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
DFIT+ K D+ W ++P V G IM+ F G P++ + + ++ D
Sbjct: 126 TDFITISKHDEGGWTLMKPVVFGEIMDFFAEGKPVM-------LAEPVVTDTTILDDDDE 178
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVAN 174
VV IKE+L RVRPAV DGGDI ++G+ G V + + G+C GCPS++ TLK GV
Sbjct: 179 VVAMIKELLQERVRPAVQEDGGDIFYRGFDPNTGTVNVQLAGSCVGCPSSTVTLKNGVEK 238
Query: 175 ILNHFVPEVKDIRTV 189
+L H++PEV + V
Sbjct: 239 MLMHYIPEVTAVNAV 253
>gi|326475115|gb|EGD99124.1| NifU domain-containing protein [Trichophyton tonsurans CBS 112818]
gi|326482250|gb|EGE06260.1| scaffold protein Nfu/NifU [Trichophyton equinum CBS 127.97]
Length = 304
Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 117/203 (57%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHF-------SNAKEAEISPLASRIFSIPGIA 52
+FI+T+ TPN LKF P VL EG + F S + SPLA+++ ++ G
Sbjct: 72 IFIETDTTPNADALKFRPNHPVLPEGFPVSFLEYLTPRSTLQPPYPSPLAAKLLNVDGAV 131
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIH-----NGGLGDMKLDDMG 106
SV+FG DFITV KD +W H++P V +I E G+ +++ G G +
Sbjct: 132 SVFFGSDFITVTKDSDANWAHIKPEVFSLITEAITRGEALVNVVDVRPGKEGAEGAEAEE 191
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ + E D VV I+E+L+ R+RPA+ DGGDI F+G+ +G V L +RGAC C S++
Sbjct: 192 AVRYNEEDEEVVGMIQELLETRIRPAIQEDGGDIEFRGFENGNVLLKLRGACRTCDSSTV 251
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ ++L H++ EVK + V
Sbjct: 252 TLKNGIESMLMHYIEEVKSVTQV 274
>gi|315052166|ref|XP_003175457.1| hypothetical protein MGYG_02982 [Arthroderma gypseum CBS 118893]
gi|311340772|gb|EFQ99974.1| hypothetical protein MGYG_02982 [Arthroderma gypseum CBS 118893]
Length = 301
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 116/202 (57%), Gaps = 13/202 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHF-------SNAKEAEISPLASRIFSIPGIA 52
+FI+T+ TPN LKF P VL EG + F S + SPLA+++ ++ G
Sbjct: 72 IFIETDTTPNADALKFRPNHPVLPEGFPVSFLEYLNPRSTLQPPYPSPLAAKLLNVDGAV 131
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIH----NGGLGDMKLDDMGS 107
SV+FG DFITV KD +W H++P + +I E G+ +++ G + +
Sbjct: 132 SVFFGSDFITVTKDSDANWAHIKPEIFSLITEAITRGEALVNVVDVRPGKEGAEEVGEEA 191
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASET 167
+ E D +V I+E+L+ R+RPA+ DGGDI F+G+ +G V L +RGAC C S++ T
Sbjct: 192 VRYNEEDEEIVGMIQELLETRIRPAIQEDGGDIEFRGFENGNVLLKLRGACRTCDSSTVT 251
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
LK G+ ++L H++ EVK + V
Sbjct: 252 LKNGIESMLMHYIEEVKSVTQV 273
>gi|300175875|emb|CBK21871.2| Scaffold protein Isu1 [Blastocystis hominis]
Length = 271
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 115/193 (59%), Gaps = 15/193 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA-----IHFSNAKEAEISPLASRIFSIPGIASVY 55
+F+Q ++TPNP KF+P + V + + F+ KEA SPLAS++F IP + SV
Sbjct: 28 LFVQIKETPNPDVQKFLPTPSISVLPSEFGHTMEFNTTKEARASPLASKLFDIPEVKSVL 87
Query: 56 FGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGS--GDFIE 112
G D+I V + + +WE+L P + I++ F S D H + +K D++ + +
Sbjct: 88 LGNDYICVTRQKGVEWEYLNPAIFHTILDFFSSPD---HEAVV--LKPDEIPEDPNEIKD 142
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKY 170
+DS VV+ IKE+LD R+RP + DGGDI F + + G + + M GAC GC S+S TLK
Sbjct: 143 TDSEVVRLIKELLDTRIRPRIKADGGDIFFHTFDESSGELLVRMTGACKGCASSSVTLKQ 202
Query: 171 GVANILNHFVPEV 183
GV ++ H++PEV
Sbjct: 203 GVEQMMKHYIPEV 215
>gi|50419691|ref|XP_458373.1| DEHA2C15796p [Debaryomyces hansenii CBS767]
gi|49654039|emb|CAG86455.1| DEHA2C15796p [Debaryomyces hansenii]
Length = 246
Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 112/194 (57%), Gaps = 11/194 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAI-HFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT +TPN LKF+P ++ E F + +EA SPLA ++FSI GI S+ FG +
Sbjct: 29 LFIQTMETPNEHALKFLPSMQIMKENETREFLSGREAACSPLALKLFSIDGIKSIMFGSN 88
Query: 60 FITVGKDQYD--WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FIT+ K D W L+P + ++ E +G PI++ DDM + E D
Sbjct: 89 FITIEKANEDLHWSLLKPEIFSILTEFLNNGTPILNEES---ELTDDM---EISEDDDET 142
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE++ R+RPA+ DGGDI F + + G V+L ++GAC C S+S TLK G+ ++
Sbjct: 143 VTMIKELIFTRIRPAIQDDGGDIEFVSFAEDNGTVYLRLKGACRSCDSSSVTLKNGIESM 202
Query: 176 LNHFVPEVKDIRTV 189
L +++ EV + V
Sbjct: 203 LKYYIEEVTTVEQV 216
>gi|116781621|gb|ABK22181.1| unknown [Picea sitchensis]
Length = 181
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/168 (43%), Positives = 103/168 (61%), Gaps = 14/168 (8%)
Query: 26 GAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEH 84
G+ F NA+ A SPLA ++ I G+A ++FG DFITV K ++ W+ L+P + IM+
Sbjct: 4 GSADFPNARVAMGSPLAKSLYGIDGVARIFFGSDFITVTKSEEVSWDILKPEIFAAIMDF 63
Query: 85 FISGDPII---HNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIV 141
+ SG P+ +G D ++ E D V IKE+L+ R+RPAV DGGDI
Sbjct: 64 YSSGQPLFLDSKSGAPTDTAIN--------EDDDETVAMIKELLETRIRPAVQDDGGDIE 115
Query: 142 FKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
+ G+ G+V L M+GACSGCPS+S TLK G+ N+L H+VPEVK +
Sbjct: 116 YCGFDPETGVVKLKMQGACSGCPSSSLTLKSGIENMLMHYVPEVKGVE 163
>gi|302500846|ref|XP_003012416.1| hypothetical protein ARB_01375 [Arthroderma benhamiae CBS 112371]
gi|291175974|gb|EFE31776.1| hypothetical protein ARB_01375 [Arthroderma benhamiae CBS 112371]
Length = 264
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 116/203 (57%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHF-------SNAKEAEISPLASRIFSIPGIA 52
+FI+T+ TPN LKF P VL EG + F S + SPLA+++ ++ G
Sbjct: 32 IFIETDTTPNADALKFRPNHPVLPEGFPVSFLEYLTPRSTLQPPYPSPLAAKLLNVDGAV 91
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIH-----NGGLGDMKLDDMG 106
SV+FG DFITV KD +W H++P + +I E G+ +++ G G
Sbjct: 92 SVFFGSDFITVTKDSDANWAHIKPEIFSLITEAITRGEALVNVVDVRQGKEGAEGAGAEE 151
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ + E D VV I+E+L+ R+RPA+ DGGDI F+G+ +G V L +RGAC C S++
Sbjct: 152 AVRYNEEDEEVVGMIQELLETRIRPAIQEDGGDIEFRGFENGNVLLKLRGACRTCDSSTV 211
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ ++L H++ EVK + V
Sbjct: 212 TLKNGIESMLMHYIEEVKSVTQV 234
>gi|260949769|ref|XP_002619181.1| hypothetical protein CLUG_00340 [Clavispora lusitaniae ATCC 42720]
gi|238846753|gb|EEQ36217.1| hypothetical protein CLUG_00340 [Clavispora lusitaniae ATCC 42720]
Length = 237
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 113/190 (59%), Gaps = 10/190 (5%)
Query: 4 QTEDTPNPATLKFIPGQVV---LVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+T TPN LKF+ + L FS + +A SPLA ++F + G+ SV G+DF
Sbjct: 17 KTYPTPNENALKFVSPEAEISPLKNKTFEFSTSLQAVHSPLALKLFKLNGVKSVMIGHDF 76
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGD-PIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+TV K D +W HLRP V+ ++ S D P+I + + D + + E+DS VV
Sbjct: 77 LTVNKLDHVNWAHLRPEVVKLLDSFLTSKDEPVITKELIQQGENDSLSAS---ENDSEVV 133
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE++D R+RPA+ DGGDI +K + + G VFL ++GAC C ++ +TLK G+ ++L
Sbjct: 134 SMIKELIDTRIRPAIQDDGGDIEYKAFDEETGTVFLKLQGACKSCSASEDTLKGGIESML 193
Query: 177 NHFVPEVKDI 186
H++ EVK++
Sbjct: 194 MHYIEEVKEV 203
>gi|258565761|ref|XP_002583625.1| HIRA-interacting protein 5 [Uncinocarpus reesii 1704]
gi|237907326|gb|EEP81727.1| HIRA-interacting protein 5 [Uncinocarpus reesii 1704]
Length = 316
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 117/203 (57%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--------VEGAIHFSNAKEAEISPLASRIFSIPGIA 52
+FIQTE TPN LKFIP VL +E S SPLA+++F++ G++
Sbjct: 72 IFIQTETTPNADALKFIPNFTVLPKDFPTPFLEYLSPRSTLAPPHPSPLAAKLFNVDGVS 131
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD-----MKLDDMG 106
SV++G DFIT+ K W H++P V +I E SG+ +++ D +
Sbjct: 132 SVFYGPDFITITKAGDASWAHIKPEVFSLITEAVTSGEQLVNTVAAKDGAEPGQEGSAEE 191
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ ++ E D +V I+E+L+ R+RPA+ DGGDI F+G++DG V L +RGAC C S++
Sbjct: 192 APEYAEEDEEIVGMIQELLETRIRPAIQEDGGDIEFRGFKDGNVMLKLRGACRTCDSSTV 251
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ ++L H++ EV + V
Sbjct: 252 TLKNGIESMLMHYIEEVTSVTQV 274
>gi|255726880|ref|XP_002548366.1| hypothetical protein CTRG_02663 [Candida tropicalis MYA-3404]
gi|240134290|gb|EER33845.1| hypothetical protein CTRG_02663 [Candida tropicalis MYA-3404]
Length = 261
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 113/194 (58%), Gaps = 9/194 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAI-HFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT +TPN LKF+P +L E F + +EA SPLA ++FSI GI SV +G D
Sbjct: 32 LFIQTSETPNEQALKFLPSIQILGENQTKEFLSGREAACSPLAVKLFSIDGIKSVMYGSD 91
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPII-HNGGLGDMKLDDMGSGDFIESDSAV 117
FIT+ K + W L+P + ++ E+ +G PI+ N G + D D E V
Sbjct: 92 FITIEKSENIAWPLLKPEIFSILTEYLTNGSPILLENDKNGIITDDMAFDEDDDE----V 147
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE++ R+RPA+ DGGDI F + +G V+L ++GAC C S+S TLK G+ ++
Sbjct: 148 VSMIKELIFTRIRPAIQDDGGDIEFIKFEPDNGTVYLKLKGACRSCDSSSVTLKNGIESM 207
Query: 176 LNHFVPEVKDIRTV 189
L H++ EV + +
Sbjct: 208 LKHYIEEVNSVEPI 221
>gi|256419768|ref|YP_003120421.1| nitrogen-fixing NifU domain protein [Chitinophaga pinensis DSM
2588]
gi|256034676|gb|ACU58220.1| nitrogen-fixing NifU domain protein [Chitinophaga pinensis DSM
2588]
Length = 198
Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 3/185 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I TE TPNP T+KF+ +++ I F + A+ SPLA +FS P I V+ +FIT
Sbjct: 11 IYTEMTPNPETMKFVANKLLYPGKHIDFPDEASAKPSPLAVELFSFPFIRGVFIMANFIT 70
Query: 63 VGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
+ K DW + P + + E+ P+I+ + K + + D+ VV+RI
Sbjct: 71 LTKTPDTDWNDIIPTIKAFLKEYLEDNRPVINEEEIVVTKA--AATNEVSADDTDVVKRI 128
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
KE+L+N V+PAV DGG I FK Y DG V L ++G+CSGCPS+ TLK G+ ++ +P
Sbjct: 129 KELLENYVKPAVEMDGGAIQFKDYDDGTVTLMLQGSCSGCPSSMITLKAGIEGMMKRMIP 188
Query: 182 EVKDI 186
EVK++
Sbjct: 189 EVKEV 193
>gi|218659803|ref|ZP_03515733.1| Scaffold protein Nfu/NifU [Rhizobium etli IE4771]
Length = 107
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 57/97 (58%), Positives = 76/97 (78%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPAT KF+PG+VV+ G F +A+EA+ SPLA+R+F IPG+ VYFGYDF
Sbjct: 9 MFIQTEATPNPATQKFLPGKVVMENGTAEFRSAEEAQASPLAARLFEIPGVTGVYFGYDF 68
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGL 97
I+V KD +W+HL+P +LG IMEHF+SG P++ + +
Sbjct: 69 ISVSKDDVEWQHLKPAILGSIMEHFMSGKPVMGDASI 105
>gi|148666783|gb|EDK99199.1| mCG130855, isoform CRA_c [Mus musculus]
Length = 219
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 95/156 (60%), Gaps = 7/156 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 69 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 128
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K ++ DW L+P + IM+ F SG P++ + G E D VV
Sbjct: 129 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVT-----EETPPPPGEAGSSEEDDEVV 183
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSM 154
IKE+LD R+RP V DGGD++++G+ DGIV L +
Sbjct: 184 AMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKL 219
>gi|295673142|ref|XP_002797117.1| LiPid Depleted family member [Paracoccidioides brasiliensis Pb01]
gi|226282489|gb|EEH38055.1| LiPid Depleted family member [Paracoccidioides brasiliensis Pb01]
Length = 317
Score = 134 bits (337), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 114/200 (57%), Gaps = 15/200 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHF-------SNAKEAEISPLASRIFSIPGIA 52
+FIQTE+TPN LKFIP VL E F S SPLAS++ ++ G++
Sbjct: 82 IFIQTENTPNADALKFIPNHSVLPENFPTTFLEYLSPRSTLAPPYPSPLASKLLNVDGVS 141
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPI--IHNGGLGDMKLDDMGSGD 109
+V++G DFIT+ K +W H++P V +I E +GDPI I G G ++ S
Sbjct: 142 AVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTAGDPIVTISEAGAGSQAQEE-DSLS 200
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ E D VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ K
Sbjct: 201 YNEDDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFDDGIVNLKLRGACRTCDSST---K 257
Query: 170 YGVANILNHFVPEVKDIRTV 189
V + H +++++ V
Sbjct: 258 LFVPTLRGHAEISIEEVKGV 277
>gi|241950625|ref|XP_002418035.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223641374|emb|CAX43334.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 237
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 113/190 (59%), Gaps = 14/190 (7%)
Query: 4 QTEDTPNPATLKFIPGQVVLV---EGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+T TPNP LKFI + ++ + F+ +A SPLA +F IPG+ SV GYDF
Sbjct: 19 KTLPTPNPNALKFISPECNILPMEDKTFEFTTTLQAIHSPLALTLFKIPGVKSVMLGYDF 78
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGD-PIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+TV K Y +W +LRP ++ + E S P+I + + + + E +S ++
Sbjct: 79 LTVNKQDYINWANLRPEIVEHLDEFLTSKKHPVITKELVDEAQRE-------AEEESELI 131
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+++ R+RPA+ DGGDI KG+ + G VF+ ++GAC C ++ +TLK+G+ ++L
Sbjct: 132 SMIKELIETRIRPAIQDDGGDIELKGFDEETGTVFVKLQGACKSCSASEDTLKHGIESML 191
Query: 177 NHFVPEVKDI 186
H+V EVK++
Sbjct: 192 MHYVEEVKEV 201
>gi|327299030|ref|XP_003234208.1| NifU domain-containing protein [Trichophyton rubrum CBS 118892]
gi|326463102|gb|EGD88555.1| NifU domain-containing protein [Trichophyton rubrum CBS 118892]
Length = 288
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 112/194 (57%), Gaps = 14/194 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHF-------SNAKEAEISPLASRIFSIPGIA 52
+FI+T+ TPN LKF P VL EG + F S + SPLA+++ ++ G
Sbjct: 72 IFIETDTTPNADALKFRPNHPVLPEGFPVSFLEYLTPRSTLQPPYPSPLAAKLLNVDGAV 131
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIH-----NGGLGDMKLDDMG 106
SV+FG DFITV KD +W H++P + +I E G+ +++ G G +
Sbjct: 132 SVFFGSDFITVTKDSDANWAHIKPEIFSLITEAITRGEALVNVVDVRQGKEGAEGAEAEE 191
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ + E D VV I+E+L+ R+RPA+ DGGDI F+G+ +G V L +RGAC C S++
Sbjct: 192 AVRYNEEDEEVVGMIQELLETRIRPAIQEDGGDIEFRGFENGNVLLKLRGACRTCDSSTV 251
Query: 167 TLKYGVANILNHFV 180
TLK G+ ++L H+V
Sbjct: 252 TLKNGIESMLMHYV 265
>gi|218516514|ref|ZP_03513354.1| nitrogen fixation protein [Rhizobium etli 8C-3]
Length = 99
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 73/92 (79%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPAT KF+PG+VV+ G F +A EAE SPLA+R+F IPG+ VYFGYDF
Sbjct: 1 MFIQTEATPNPATQKFLPGKVVMENGTAEFRSAAEAEASPLAARLFEIPGVTGVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPII 92
I+V KD +W+HL+P +LG IM+HF+SG P++
Sbjct: 61 ISVSKDNAEWQHLKPAILGSIMKHFMSGKPVM 92
>gi|146418001|ref|XP_001484967.1| hypothetical protein PGUG_02696 [Meyerozyma guilliermondii ATCC
6260]
Length = 244
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 119/193 (61%), Gaps = 11/193 (5%)
Query: 4 QTEDTPNPATLKFI-PGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
QT TPN LKF+ P ++V +E F+++ +A SPLA ++F +PG+ SV G DF+
Sbjct: 23 QTLSTPNENALKFVSPTKIVPMENKTFEFTSSLQAVHSPLALKLFKLPGVRSVMLGPDFL 82
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFIS--GDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
TV K D +W HLRP VL + ++ F++ +P+I + + + + D +V
Sbjct: 83 TVNKQDHVNWAHLRPEVLSL-LDKFLTEKQEPVITKELIEATEKEAAEADA---DDLEIV 138
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+++ R+RPA+ DGGDI +K + + G VFL ++GAC C ++ +TLK+G+ ++L
Sbjct: 139 SMIKELIETRIRPAIQDDGGDIEYKAFDEETGTVFLKLQGACKSCSASEDTLKHGIESML 198
Query: 177 NHFVPEVKDIRTV 189
H+V EV+++ +
Sbjct: 199 KHYVEEVQEVEQI 211
>gi|149248632|ref|XP_001528703.1| hypothetical protein LELG_01223 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448657|gb|EDK43045.1| hypothetical protein LELG_01223 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 248
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 118/202 (58%), Gaps = 17/202 (8%)
Query: 1 MFIQTEDTPNPATLKFI-PGQVVL--VEGAIHFSNAKEAEISPLASRIFSIPGIASVYFG 57
+ +T TPN LKFI P +L F++ +A SPLA ++F IPG+ S+ G
Sbjct: 17 LHFKTASTPNENALKFISPESPILPVANTTFEFNSTLQAIHSPLALQLFKIPGVKSIMLG 76
Query: 58 YDFITVGK-DQYDWEHLRPPVLGMIMEHFI------SGD-PIIHNGGLGDMKLDDMGSGD 109
+DF+TV K D +DW L P V+ +M F+ SG P++ L + + +
Sbjct: 77 HDFLTVNKLDNHDWNSLSPEVMD-VMNKFLDKAGENSGKVPVVTQELLNKAESERLAED- 134
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASET 167
E DS +V IKE+++ R+RPA+ DGGDI +KG+ + G VFL ++GAC C ++ +T
Sbjct: 135 --EDDSELVLMIKELIETRIRPAIQDDGGDIEYKGFDEETGTVFLKLQGACKSCSASEDT 192
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
LK G+ ++L H++ EVK+++ +
Sbjct: 193 LKGGIESMLMHYIEEVKEVQQI 214
>gi|68472639|ref|XP_719638.1| hypothetical protein CaO19.9614 [Candida albicans SC5314]
gi|68472898|ref|XP_719514.1| hypothetical protein CaO19.2067 [Candida albicans SC5314]
gi|46441335|gb|EAL00633.1| hypothetical protein CaO19.2067 [Candida albicans SC5314]
gi|46441464|gb|EAL00761.1| hypothetical protein CaO19.9614 [Candida albicans SC5314]
Length = 237
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 113/190 (59%), Gaps = 14/190 (7%)
Query: 4 QTEDTPNPATLKFIPGQVVLV---EGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+T TPNP LKFI + ++ + F+ +A SPLA +F IPG+ SV G+DF
Sbjct: 19 KTLPTPNPNALKFISPECNILPMNDKTFEFTTTLQAIHSPLALTLFKIPGVKSVMLGHDF 78
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGD-PIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+TV K Y +W +LRP ++ + E S P+I + + + + E +S ++
Sbjct: 79 LTVNKQDYINWANLRPEIVEQLDEFLTSKKHPVITKELVDEAQRE-------AEEESELI 131
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+++ R+RPA+ DGGDI KG+ + G VF+ ++GAC C ++ +TLK+G+ ++L
Sbjct: 132 SMIKELIETRIRPAIQDDGGDIELKGFDEETGTVFVKLQGACKSCSASEDTLKHGIESML 191
Query: 177 NHFVPEVKDI 186
H+V EVK++
Sbjct: 192 MHYVEEVKEV 201
>gi|126131446|ref|XP_001382248.1| hypothetical protein PICST_76567 [Scheffersomyces stipitis CBS
6054]
gi|126094073|gb|ABN64219.1| nitrogen fixing protein [Scheffersomyces stipitis CBS 6054]
Length = 242
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 116/191 (60%), Gaps = 12/191 (6%)
Query: 4 QTEDTPNPATLKFIPGQVVLVEGA---IHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
QT TPNP LKFI + ++ A F++ ++ SPLA R+F IPG+ SV G +F
Sbjct: 18 QTLPTPNPNALKFISPECNILPMAGKTFEFTSTLQSVHSPLALRLFKIPGVRSVMLGENF 77
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFIS--GDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+TV K D +W +LRP V+ + M+ F++ +P I L D + + DS +
Sbjct: 78 LTVNKQDHINWANLRPEVVEL-MDDFLTTKQEPSI-TKELVDQSQQESEVAE--AEDSEI 133
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE+++ R+RPA+ DGGDI +K + + G VFL ++GAC C S+ +TLK+G+ ++
Sbjct: 134 VSMIKELIETRIRPAIQDDGGDIEYKAFDEETGTVFLKLQGACKSCSSSEDTLKHGIESM 193
Query: 176 LNHFVPEVKDI 186
L H++ EV+++
Sbjct: 194 LMHYIEEVREV 204
>gi|312885490|ref|ZP_07745129.1| Scaffold protein Nfu/NifU [Mucilaginibacter paludis DSM 18603]
gi|311302070|gb|EFQ79100.1| Scaffold protein Nfu/NifU [Mucilaginibacter paludis DSM 18603]
Length = 182
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 114/185 (61%), Gaps = 13/185 (7%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ TE TPNPAT+KFI ++ L+ G++ ++ + AE SP A +F + V+F +F+T
Sbjct: 5 VYTESTPNPATMKFIVNKL-LINGSVDYATRESAEKSPFAKELFKFSFVNGVFFASNFVT 63
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K + DW L P I++ F+ G + + L +++ + F +D+ + +I
Sbjct: 64 VTKTEGSDWNDLEP-----ILKEFVKG--AVESELL--VQIKEQEEVAFEGTDAEI--KI 112
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
+++L + VRPAV +DGG I +K + +G+V + +RG+CSGCPS++ TLK G+ N+L VP
Sbjct: 113 QQILQDYVRPAVEQDGGAITYKSFNEGVVTVELRGSCSGCPSSTITLKSGIENLLKRMVP 172
Query: 182 EVKDI 186
EV ++
Sbjct: 173 EVTEV 177
>gi|255723790|ref|XP_002546824.1| hypothetical protein CTRG_01129 [Candida tropicalis MYA-3404]
gi|240134715|gb|EER34269.1| hypothetical protein CTRG_01129 [Candida tropicalis MYA-3404]
Length = 237
Score = 130 bits (328), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 110/189 (58%), Gaps = 13/189 (6%)
Query: 8 TPNPATLKFIPGQVVLV---EGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVG 64
TPNP LKFI + ++ + F+ +A SPLA +F IPG+ SV G+DF+TV
Sbjct: 22 TPNPNALKFISEECNILPMEDKTFEFTTTMQAMHSPLALMLFKIPGVNSVMLGHDFLTVN 81
Query: 65 KDQY-DWEHLRPPVLGMIMEHFISG-DPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIK 122
K Y +W +LRP ++ + E S P+I +L D + + DS ++ IK
Sbjct: 82 KQDYINWANLRPEIVEHLDEFLTSKKQPVITK------ELIDKANEESEMDDSELMSMIK 135
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
E+++ R+RPA+ DGGDI KG+ + G VF+ ++GAC C ++ +TLK G+ +L H++
Sbjct: 136 ELIETRIRPAIQDDGGDIELKGFDEETGTVFVKLQGACKSCSASEDTLKSGIEGMLMHYI 195
Query: 181 PEVKDIRTV 189
EVK++ V
Sbjct: 196 EEVKEVVQV 204
>gi|238881874|gb|EEQ45512.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 237
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 113/190 (59%), Gaps = 14/190 (7%)
Query: 4 QTEDTPNPATLKFIPGQVVLV---EGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+T TPNP LKFI + ++ + F+ +A SPLA +F IPG+ SV G+DF
Sbjct: 19 KTLPTPNPNALKFISPECNILPMNDKTFEFTTTLQAIHSPLALTLFKIPGVKSVMLGHDF 78
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGD-PIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+TV K Y +W +LRP ++ + E S P+I + + + + E +S ++
Sbjct: 79 LTVNKQDYINWANLRPGIVEQLDEFLTSKKHPVITKELVDEAQRE-------AEEESELI 131
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+++ R+RPA+ DGGDI KG+ + G VF+ ++GAC C ++ +TLK+G+ ++L
Sbjct: 132 SMIKELIETRIRPAIQDDGGDIELKGFDEETGTVFVKLQGACKSCSASEDTLKHGIESML 191
Query: 177 NHFVPEVKDI 186
H+V EVK++
Sbjct: 192 MHYVEEVKEV 201
>gi|110636788|ref|YP_676995.1| thioredoxin-like protein [Cytophaga hutchinsonii ATCC 33406]
gi|110279469|gb|ABG57655.1| thioredoxin-related protein [Cytophaga hutchinsonii ATCC 33406]
Length = 191
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 105/185 (56%), Gaps = 7/185 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ TE TPNP TLKFI + ++ EG++ F A AE PL +F + V+ +FIT
Sbjct: 8 VYTEATPNPNTLKFITDKTLVEEGSVDFPMASSAESCPLVLDLFRFDFVKRVFMAANFIT 67
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K + +WE + + +I + G P+ + + +E + VV +I
Sbjct: 68 VTKSEGMEWEEVSGMIKSLIKGYIEEGKPLFKETH------KPLSNTAPVEGEPEVVTKI 121
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
K VLD +RPAV +DGG I F+ + DG+V + ++G+CSGCPS++ TLK G+ N+L VP
Sbjct: 122 KVVLDEYIRPAVEQDGGAINFESFVDGVVKVQLQGSCSGCPSSTVTLKSGIENLLKRMVP 181
Query: 182 EVKDI 186
EV ++
Sbjct: 182 EVTEV 186
>gi|190346499|gb|EDK38598.2| hypothetical protein PGUG_02696 [Meyerozyma guilliermondii ATCC
6260]
Length = 244
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 120/196 (61%), Gaps = 11/196 (5%)
Query: 1 MFIQTEDTPNPATLKFI-PGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ QT TPN LKF+ P ++V +E F+++ +A SPLA ++F +PG+ SV G
Sbjct: 20 LTFQTLSTPNENALKFVSPTKIVPMENKTFEFTSSLQAVHSPLALKLFKLPGVRSVMLGP 79
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFIS--GDPIIHNGGLGDMKLDDMGSGDFIESDS 115
DF+TV K D +W HLRP V +++ F++ +P+I + + + + DS
Sbjct: 80 DFLTVNKQDHVNWAHLRPEV-SSLLDKFLTEKQEPVITKELIEATEKEAAEADA---DDS 135
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVA 173
+V IKE+++ R+RPA+ DGGDI +K + + G VFL ++GAC C ++ +TLK+G+
Sbjct: 136 EIVSMIKELIETRIRPAIQDDGGDIEYKAFDEETGTVFLKLQGACKSCSASEDTLKHGIE 195
Query: 174 NILNHFVPEVKDIRTV 189
++L H+V EV+++ +
Sbjct: 196 SMLKHYVEEVQEVEQI 211
>gi|195559882|ref|XP_002077376.1| GD12677 [Drosophila simulans]
gi|194202482|gb|EDX16058.1| GD12677 [Drosophila simulans]
Length = 175
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 90/149 (60%), Gaps = 8/149 (5%)
Query: 42 ASRIFSIPGIASVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDM 100
A +F + G+ V+FG DFIT+ K + +W ++P V +IM+ F SG P++++
Sbjct: 1 AKLLFRVEGVKGVFFGSDFITISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPN-- 58
Query: 101 KLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSG 160
+ +E D V IKE+LD R+RP V DGGDIVF GY G+V L M+G+CS
Sbjct: 59 -----ADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSS 113
Query: 161 CPSASETLKYGVANILNHFVPEVKDIRTV 189
CPS+ TLK GV N+L ++PEV+ + V
Sbjct: 114 CPSSIVTLKNGVQNMLQFYIPEVESVEQV 142
>gi|311745600|ref|ZP_07719385.1| NifU domain protein [Algoriphagus sp. PR1]
gi|126578163|gb|EAZ82383.1| NifU domain protein [Algoriphagus sp. PR1]
Length = 193
Score = 127 bits (319), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 109/185 (58%), Gaps = 10/185 (5%)
Query: 6 EDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVG 64
E PNP +LKF+ +++ EG + F +A AE SPLA +F+ + V+ +F+TV
Sbjct: 14 EANPNPNSLKFVANFMLVDEGVSFDFPDAASAENSPLALELFNFSAVDRVFVASNFVTVT 73
Query: 65 KDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKE 123
K + +W ++ I ++ SG ++ D D + F E+DS V++IK
Sbjct: 74 KKEDVEWSEVQNIFRDHIKKYLESGQAVVK----ADFDKDPL----FDENDSETVKKIKG 125
Query: 124 VLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEV 183
+LD +RPAV +DGG IVF + DG+V + ++G+CSGCPS++ TLK G+ N+L +PEV
Sbjct: 126 ILDEYIRPAVEQDGGAIVFHSFHDGVVKVLLQGSCSGCPSSTVTLKAGIQNLLTRMLPEV 185
Query: 184 KDIRT 188
K++
Sbjct: 186 KEVEA 190
>gi|255532822|ref|YP_003093194.1| nitrogen-fixing NifU domain-containing protein [Pedobacter
heparinus DSM 2366]
gi|255345806|gb|ACU05132.1| nitrogen-fixing NifU domain protein [Pedobacter heparinus DSM 2366]
Length = 183
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 112/188 (59%), Gaps = 18/188 (9%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ TE TPNPAT+KF+ ++ L+ G+ F+ + AE SP A +F + V+F +F+T
Sbjct: 5 VYTEQTPNPATMKFMVNKL-LINGSEDFATKESAEHSPFAKELFKFSFVNGVFFASNFVT 63
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD---FIESDSAVV 118
V K + +W + P I++ F+ G + K+ + S + F SD +
Sbjct: 64 VTKTEDAEWADIEP-----ILKEFVKG------AVESEYKIKEDTSAEAPAFEGSDLEI- 111
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+I+++L + VRPAV +DGG I +K + DG+V + +RG+CSGCPS++ TLK G+ N+L
Sbjct: 112 -KIQQILHDYVRPAVEQDGGAISYKSFDDGVVTVELRGSCSGCPSSTITLKSGIQNLLQR 170
Query: 179 FVPEVKDI 186
VPEVK++
Sbjct: 171 MVPEVKEV 178
>gi|332664007|ref|YP_004446795.1| nitrogen-fixing NifU domain-containing protein [Haliscomenobacter
hydrossis DSM 1100]
gi|332332821|gb|AEE49922.1| nitrogen-fixing NifU domain-containing protein [Haliscomenobacter
hydrossis DSM 1100]
Length = 212
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 111/191 (58%), Gaps = 7/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
+ + TE TPNP +LKF+ ++ L G F A E SPLA+ +F P + VY +
Sbjct: 19 VLLYTEQTPNPESLKFVTNRM-LYRGTADFREVDLATEWSPLATALFDFPYVRGVYVSNN 77
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNG---GLGDMKLDDMGSGDFIESDS 115
F+TV K+ Y+W + + I + G ++ G + ++ D G + ++
Sbjct: 78 FVTVSKELNYEWPDIMLKLKDFIKNYIEEGGELVKEGFAEHISKIEADRAGVA-YTGDEA 136
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+VQ+IKE++D V+PAV DGG+I FK Y +G VF+ M+G+CSGCPS++ TLK G+ +
Sbjct: 137 ELVQKIKELIDTYVKPAVEMDGGNIEFKHYENGKVFVLMQGSCSGCPSSTVTLKAGIEGM 196
Query: 176 LNHFVPEVKDI 186
L +P+V+++
Sbjct: 197 LKRMIPQVEEV 207
>gi|323347797|gb|EGA82061.1| Nfu1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 256
Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 117/204 (57%), Gaps = 19/204 (9%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEGA--IHFSNAKEAEI--SPLASRIF-SIPGIAS 53
+ I+T TPN LKF+ G+++ G+ I N E I S LA +IF PG+ S
Sbjct: 22 IHIKTLTTPNENALKFLSTDGEMLQTRGSKSIVIKNTDENLINHSKLAQQIFLQCPGVES 81
Query: 54 VYFGYDFITVGKDQY-DWEHLRPPVLGMIMEHFISGDPII--------HNGGLGDMKLDD 104
+ G DF+T+ KD+ W ++P ++ ++ + G+ +I G G K++
Sbjct: 82 LMIGDDFLTINKDRMVHWNSIKPEIIDLLTKQLAXGEDVISKEFHAVQEEEGEGGYKIN- 140
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCP 162
M + E D V + I+E++D R+RPA+ DGGDI ++G+ + G V+L ++GAC+ C
Sbjct: 141 MPKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCS 200
Query: 163 SASETLKYGVANILNHFVPEVKDI 186
S+ TLKYG+ ++L H+V EVK++
Sbjct: 201 SSEVTLKYGIESMLKHYVDEVKEV 224
>gi|327188587|gb|EGE55797.1| nitrogen fixation protein [Rhizobium etli CNPAF512]
Length = 107
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 84/109 (77%), Gaps = 9/109 (8%)
Query: 82 MEHFISGDPIIHNGGLGDMKL--DDMGSGD--FIESDSAVVQRIKEVLDNRVRPAVARDG 137
MEHF+SG P+ +GD + +D +GD F E D ++V IKE+L+ RVRPAVA+DG
Sbjct: 1 MEHFMSGKPV-----MGDASILSEDADAGDEFFDEGDESIVLTIKELLETRVRPAVAQDG 55
Query: 138 GDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
GDI F+G++DG V+L+M+G+CSGCPS++ TLK+GV N+L HFVPEV+++
Sbjct: 56 GDITFRGFKDGKVYLNMKGSCSGCPSSTATLKHGVQNLLRHFVPEVQEV 104
>gi|6322811|ref|NP_012884.1| Nfu1p [Saccharomyces cerevisiae S288c]
gi|549668|sp|P32860|NFU1_YEAST RecName: Full=NifU-like protein, mitochondrial; Flags: Precursor
gi|486050|emb|CAA81875.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45269699|gb|AAS56230.1| YKL040C [Saccharomyces cerevisiae]
gi|190409786|gb|EDV13051.1| hypothetical protein SCRG_03979 [Saccharomyces cerevisiae RM11-1a]
gi|207343478|gb|EDZ70927.1| YKL040Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272476|gb|EEU07457.1| Nfu1p [Saccharomyces cerevisiae JAY291]
gi|259147796|emb|CAY81046.1| Nfu1p [Saccharomyces cerevisiae EC1118]
gi|285813219|tpg|DAA09116.1| TPA: Nfu1p [Saccharomyces cerevisiae S288c]
Length = 256
Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 117/204 (57%), Gaps = 19/204 (9%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEGA--IHFSNAKEAEI--SPLASRIF-SIPGIAS 53
+ I+T TPN LKF+ G+++ G+ I N E I S LA +IF PG+ S
Sbjct: 22 IHIKTLTTPNENALKFLSTDGEMLQTRGSKSIVIKNTDENLINHSKLAQQIFLQCPGVES 81
Query: 54 VYFGYDFITVGKDQY-DWEHLRPPVLGMIMEHFISGDPII--------HNGGLGDMKLDD 104
+ G DF+T+ KD+ W ++P ++ ++ + G+ +I G G K++
Sbjct: 82 LMIGDDFLTINKDRMVHWNSIKPEIIDLLTKQLAYGEDVISKEFHAVQEEEGEGGYKIN- 140
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCP 162
M + E D V + I+E++D R+RPA+ DGGDI ++G+ + G V+L ++GAC+ C
Sbjct: 141 MPKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCS 200
Query: 163 SASETLKYGVANILNHFVPEVKDI 186
S+ TLKYG+ ++L H+V EVK++
Sbjct: 201 SSEVTLKYGIESMLKHYVDEVKEV 224
>gi|323354104|gb|EGA85950.1| Nfu1p [Saccharomyces cerevisiae VL3]
Length = 249
Score = 124 bits (311), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 117/204 (57%), Gaps = 19/204 (9%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEGA--IHFSNAKEAEI--SPLASRIF-SIPGIAS 53
+ I+T TPN LKF+ G+++ G+ I N E I S LA +IF PG+ S
Sbjct: 22 IHIKTLTTPNENALKFLSTDGEMLQTRGSKSIVIKNTDENLINHSKLAQQIFLQCPGVES 81
Query: 54 VYFGYDFITVGKDQY-DWEHLRPPVLGMIMEHFISGDPII--------HNGGLGDMKLDD 104
+ G DF+T+ KD+ W ++P ++ ++ + G+ +I G G K++
Sbjct: 82 LMIGDDFLTINKDRMVHWNSIKPEIIDLLTKQLAYGEDVISKEFHAVQEEEGEGGYKIN- 140
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCP 162
M + E D V + I+E++D R+RPA+ DGGDI ++G+ + G V+L ++GAC+ C
Sbjct: 141 MPKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCS 200
Query: 163 SASETLKYGVANILNHFVPEVKDI 186
S+ TLKYG+ ++L H+V EVK++
Sbjct: 201 SSEVTLKYGIESMLKHYVDEVKEV 224
>gi|151941505|gb|EDN59868.1| nifu-like protein [Saccharomyces cerevisiae YJM789]
Length = 256
Score = 124 bits (311), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 117/204 (57%), Gaps = 19/204 (9%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEGA--IHFSNAKEAEI--SPLASRIF-SIPGIAS 53
+ I+T TPN LKF+ G+++ G+ I N E I S LA +IF PG+ S
Sbjct: 22 IHIKTLTTPNENALKFLSTDGEMLQTRGSKSIVIKNTDENLINHSKLAQQIFLQCPGVES 81
Query: 54 VYFGYDFITVGKDQY-DWEHLRPPVLGMIMEHFISGDPII--------HNGGLGDMKLDD 104
+ G DF+T+ KD+ W ++P ++ ++ + G+ +I G G K++
Sbjct: 82 LMIGDDFLTINKDRMVHWNSIKPEIIDLLTKQLACGEDVISKEFHAVQEEEGEGGYKIN- 140
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCP 162
M + E D V + I+E++D R+RPA+ DGGDI ++G+ + G V+L ++GAC+ C
Sbjct: 141 MPKFELSEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCS 200
Query: 163 SASETLKYGVANILNHFVPEVKDI 186
S+ TLKYG+ ++L H+V EVK++
Sbjct: 201 SSEVTLKYGIESMLKHYVDEVKEV 224
>gi|4790|emb|CAA49299.1| YKL253 [Saccharomyces cerevisiae]
Length = 230
Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 117/204 (57%), Gaps = 19/204 (9%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEGA--IHFSNAKEAEI--SPLASRIF-SIPGIAS 53
+ I+T TPN LKF+ G+++ G+ I N E I S LA +IF PG+ S
Sbjct: 22 IHIKTLTTPNENALKFLSTDGEMLQTRGSKSIVIKNTDENLINHSKLAQQIFLQCPGVES 81
Query: 54 VYFGYDFITVGKDQY-DWEHLRPPVLGMIMEHFISGDPII--------HNGGLGDMKLDD 104
+ G DF+T+ KD+ W ++P ++ ++ + G+ +I G G K++
Sbjct: 82 LMIGDDFLTINKDRMVHWNSIKPEIIDLLTKQLAYGEDVISKEFHAVQEEEGEGGYKIN- 140
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCP 162
M + E D V + I+E++D R+RPA+ DGGDI ++G+ + G V+L ++GAC+ C
Sbjct: 141 MPKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCS 200
Query: 163 SASETLKYGVANILNHFVPEVKDI 186
S+ TLKYG+ ++L H+V EVK++
Sbjct: 201 SSEVTLKYGIESMLKHYVDEVKEV 224
>gi|254566217|ref|XP_002490219.1| Protein involved in iron metabolism in mitochondria [Pichia
pastoris GS115]
gi|238030015|emb|CAY67938.1| Protein involved in iron metabolism in mitochondria [Pichia
pastoris GS115]
gi|328350616|emb|CCA37016.1| NifU-like protein 5, mitochondrial [Pichia pastoris CBS 7435]
Length = 257
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 114/213 (53%), Gaps = 24/213 (11%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSN------AKEAEISPLASRIFSIPGIASV 54
+ IQT TPN LKFI V L+ I S A E SPLA ++F +PG+ S+
Sbjct: 20 LSIQTASTPNDNALKFITKGVRLLPPHIQKSTIEIDDLASATEKSPLALQLFKVPGVKSI 79
Query: 55 YFGYDFITVGK--------DQYDWEHLRPPVLGMIMEHFISGDPIIHN-------GGLGD 99
G DFITV K D W+ L+P ++ +I N + +
Sbjct: 80 LIGDDFITVNKVDEKLSNSDHSRWQFLKPQIINVIDRSLSKSSEKKVNVLTPQFLENISN 139
Query: 100 MKLDD-MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRG 156
+ DD + S + +++D V IKE+++ R+RPA+ DGGD+ F+ + GIV++ ++G
Sbjct: 140 VHHDDYIVSQEPLDTDDDVTYEIKELINTRIRPAIQDDGGDVQFRRFDPDAGIVYIKLKG 199
Query: 157 ACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
AC C + +TLK+G+ ++L H+V EVK+++ +
Sbjct: 200 ACKSCSLSEDTLKHGIESMLQHYVEEVKEVKAI 232
>gi|326801010|ref|YP_004318829.1| Scaffold protein Nfu/NifU [Sphingobacterium sp. 21]
gi|326551774|gb|ADZ80159.1| Scaffold protein Nfu/NifU [Sphingobacterium sp. 21]
Length = 184
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 118/189 (62%), Gaps = 20/189 (10%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ TE TPNPAT+KF+ ++ L G++ F + ++A+ SP A +F + V+F +F+T
Sbjct: 6 VYTESTPNPATMKFLVNKL-LYNGSLDFPDKEKAQSSPFARELFKFNFVNGVFFASNFVT 64
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHFISG----DPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+ K + +WE + P I++ F+ G + +IH +++ D+ + + E++
Sbjct: 65 ITKSEDSEWEDILP-----ILKDFVKGAVESELLIH-----EVERDENVAFEGSETE--- 111
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++I++VL + VRPAV +DGG I +K + +G+V + +RG+CSGCPS++ TLK G+ +L
Sbjct: 112 -KKIQQVLHDYVRPAVEQDGGAIAYKSFDEGVVTVELRGSCSGCPSSTITLKAGIEGLLK 170
Query: 178 HFVPEVKDI 186
VPEV+++
Sbjct: 171 RMVPEVQEV 179
>gi|310877201|gb|ADP36961.1| hypothetical protein [Asterochloris sp. DA2]
Length = 141
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 83/123 (67%), Gaps = 11/123 (8%)
Query: 68 YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD--FIESDSAVVQRIKEVL 125
Y W L+P V IM+HF SGDP++ + D+ G+ D E DS VV IKE+L
Sbjct: 1 YTWSVLKPDVFXAIMDHFTSGDPLL-------LDDDEYGASDTAIQEDDSDVVAMIKELL 53
Query: 126 DNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEV 183
+ R+RPAV DGGDIVF+G+ + GIV L M+GACSGCPS++ TLK G+ N+L H++PEV
Sbjct: 54 ETRIRPAVMEDGGDIVFQGFDENSGIVKLKMQGACSGCPSSAVTLKSGIENMLKHYIPEV 113
Query: 184 KDI 186
K +
Sbjct: 114 KSM 116
>gi|260838224|ref|XP_002613749.1| hypothetical protein BRAFLDRAFT_84497 [Branchiostoma floridae]
gi|229299138|gb|EEN69758.1| hypothetical protein BRAFLDRAFT_84497 [Branchiostoma floridae]
Length = 263
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 105/193 (54%), Gaps = 28/193 (14%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT++TPNP +LKF+PG VL G F N A SPLA + +
Sbjct: 64 MFIQTQETPNPNSLKFLPGCEVLETGTFDFPNHSAAHASPLARLVHPL------------ 111
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI--ESDSAVV 118
D YDW+ L+P + IM+ F SG PI+ D+ D + D V
Sbjct: 112 ---DDDTYDWQILKPDIFATIMDFFASGLPIL---------TDEPPPSDTVIHPDDDETV 159
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANIL 176
Q IKE+LD R+RP V DGGDIV+ G+ GIV L M+G+CS CPS+ TL+ GV N+L
Sbjct: 160 QMIKELLDTRIRPTVQEDGGDIVYVGFDQESGIVKLKMQGSCSSCPSSVVTLRSGVQNML 219
Query: 177 NHFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 220 QFYIPEVQGVEEV 232
>gi|156839096|ref|XP_001643243.1| hypothetical protein Kpol_460p20 [Vanderwaltozyma polyspora DSM
70294]
gi|156113844|gb|EDO15385.1| hypothetical protein Kpol_460p20 [Vanderwaltozyma polyspora DSM
70294]
Length = 256
Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 112/202 (55%), Gaps = 16/202 (7%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEG--AIHFSNAKEA--EISPLASRIF-SIPGIAS 53
+ ++T TPN LKFI G++ G ++ N ++ E S A R+F PGI S
Sbjct: 27 LHVKTVSTPNENALKFISTDGELFQDRGTHSLEIKNTDDSLIEQSKFAQRLFVQCPGIES 86
Query: 54 VYFGYDFITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG---- 108
+ G DF+TV KD+ W ++P VL ++++ SG+ I+ K + G
Sbjct: 87 LMIGDDFVTVNKDEMIHWNQIKPNVLEILLQQLSSGESIVTQKFHEISKESESGYDIQLP 146
Query: 109 --DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSA 164
+ E + V I E++ R+RPA+ DGGDI ++GY + G V+L ++GAC C S+
Sbjct: 147 KFELNEDEQEVSDMIDELIQTRIRPAIQDDGGDIQYRGYDPKTGKVYLKLQGACKSCSSS 206
Query: 165 SETLKYGVANILNHFVPEVKDI 186
+TLKYG+ ++L H+V EV+++
Sbjct: 207 EDTLKYGIESMLKHYVEEVEEV 228
>gi|328350796|emb|CCA37196.1| NifU-like protein 5, mitochondrial [Pichia pastoris CBS 7435]
Length = 210
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 100/181 (55%), Gaps = 15/181 (8%)
Query: 14 LKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITV-GKDQYDWEH 72
+K +P Q I F N ++A SPLA ++F I G+ ++ G+DFITV K Q DW
Sbjct: 1 MKILPEQTT-----IEFLNGRQAFKSPLALKLFGIDGVKTIMIGHDFITVEKKTQDDWSL 55
Query: 73 LRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA--VVQRIKEVLDNRVR 130
L+P + ++ E +G P+ L + D +E D VV +KE++ R+R
Sbjct: 56 LKPEIFAVLTESLNNGTPV-----LNEQHQSDANDQALLEEDDEDEVVSMVKELIFTRIR 110
Query: 131 PAVARDGGDIVFK--GYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
PA+ DGGDI F Y G V+L +RGAC C S+S TLK G+ ++L H++ EV+ +
Sbjct: 111 PAIQDDGGDIEFVRFEYETGTVYLRLRGACRSCSSSSITLKNGIESMLKHYIEEVEAVEQ 170
Query: 189 V 189
+
Sbjct: 171 I 171
>gi|325104464|ref|YP_004274118.1| Scaffold protein Nfu/NifU [Pedobacter saltans DSM 12145]
gi|324973312|gb|ADY52296.1| Scaffold protein Nfu/NifU [Pedobacter saltans DSM 12145]
Length = 183
Score = 120 bits (301), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 110/186 (59%), Gaps = 14/186 (7%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ TE TPNP T+KFI ++ L+ G++ + + A S AS ++ + V+F +F+T
Sbjct: 5 VYTESTPNPNTMKFIVNKL-LINGSVDYPTRESATESRFASELYKFSFVNGVFFASNFVT 63
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ-R 120
+ K + +W + P I++ F+ G + + +F++ + + V+ +
Sbjct: 64 ITKSEDAEWADIEP-----ILKEFVKG------AVESEYAVQSKKEEEFVDFEGSEVEIK 112
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I+++L + V+PAV +DGG I +K + DG+V + +RG+CSGCPS++ TLK G+ ++L V
Sbjct: 113 IQQILHDYVKPAVEQDGGAIAYKSFEDGVVTVELRGSCSGCPSSTITLKSGIQSLLQRMV 172
Query: 181 PEVKDI 186
PEVK++
Sbjct: 173 PEVKEV 178
>gi|320581036|gb|EFW95258.1| hypothetical protein HPODL_3630 [Pichia angusta DL-1]
Length = 242
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG----AIHFSNAKEA-EISPLASRIFSI--PGIAS 53
+FIQT+ TPN LKF+P + + + + K+A S LA ++ S+ I S
Sbjct: 20 LFIQTQSTPNENALKFVPSEFKFLPSPNTPTLEITGIKDALNKSELAFKLLSVNDKSIKS 79
Query: 54 VYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF-- 110
+ FGY+FITV K +++ W L+P + ++ EH SG +I+ + + + D
Sbjct: 80 ILFGYNFITVIKGEKHSWSLLKPEIFSILTEHLTSGQAVINQKYINILGQQSAENEDLDG 139
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETL 168
E + VV I E+L R++PA+ DGGDI F + + G VFL + GAC C S+ TL
Sbjct: 140 YEDEDEVVALINELLITRIQPAIQEDGGDIKFVRFDEDTGTVFLKLIGACKSCSSSEITL 199
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ +L ++ EVK ++ V
Sbjct: 200 KNGIEEMLKFYIDEVKSVQQV 220
>gi|149280243|ref|ZP_01886366.1| thioredoxin-related protein [Pedobacter sp. BAL39]
gi|149229080|gb|EDM34476.1| thioredoxin-related protein [Pedobacter sp. BAL39]
Length = 183
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 110/188 (58%), Gaps = 18/188 (9%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ TE TPNPAT+KF+ ++ L+ G+ F+ + AE S A +F + V+F +F+T
Sbjct: 5 VYTEQTPNPATMKFMVNKL-LINGSEDFATRESAEHSQFAKELFKFNFVNGVFFASNFVT 63
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD---FIESDSAVV 118
+ K + DW+ + +++ F+ G + K+ + + F SD +
Sbjct: 64 ITKTEDADWQDIEA-----LLKDFVKG------AVESEYKIKEETQAEAPAFEGSDLEI- 111
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+I+++L + VRPAV +DGG I +K + +G+V + +RG+CSGCPS++ TLK G+ N+L
Sbjct: 112 -KIQQILHDYVRPAVEQDGGAISYKSFDEGVVTVELRGSCSGCPSSTITLKSGIQNLLQR 170
Query: 179 FVPEVKDI 186
VPEVK++
Sbjct: 171 MVPEVKEV 178
>gi|79313311|ref|NP_001030735.1| NFU4; structural molecule [Arabidopsis thaliana]
gi|332642928|gb|AEE76449.1| NifU-like protein 4 [Arabidopsis thaliana]
Length = 222
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 87/146 (59%), Gaps = 6/146 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP++L F PG+ V+ G+ F N + A SPLA I+SI G+ V+FG DF
Sbjct: 80 MFIQTQSTPNPSSLMFYPGKPVMEVGSADFPNVRSALGSPLAKSIYSIDGVVRVFFGSDF 139
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D W+ L+P + +M+ + SG P+ + K + E DS V
Sbjct: 140 VTVTKSDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQAAAAKDTAIS-----EDDSETVA 194
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY 145
IKE+L+ R+RPAV DGGDI + G+
Sbjct: 195 MIKELLETRIRPAVQDDGGDIEYCGF 220
>gi|294659524|ref|XP_461916.2| DEHA2G08492p [Debaryomyces hansenii CBS767]
gi|199434030|emb|CAG90379.2| DEHA2G08492p [Debaryomyces hansenii]
Length = 240
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 114/191 (59%), Gaps = 13/191 (6%)
Query: 4 QTEDTPNPATLKFIPGQVVLV---EGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+T +TPNP LKFI + ++ F++ +A SPLA ++F + G+ S+ G DF
Sbjct: 21 KTLETPNPNALKFISPECQILPIPSKTFEFTSTLQAIHSPLALKLFKLHGVRSIMLGEDF 80
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISG--DPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+TV K D +W LRP V+ + ++ F++ + ++ + + + + S D DS +
Sbjct: 81 LTVNKQDHINWAQLRPEVVDL-LDGFLTSKKESVVTKELIEESEREIESSED----DSEI 135
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE+++ R+RPA+ DGGDI FKG+ + G VFL ++GAC C S+ +TLK G+ +
Sbjct: 136 VSMIKELIETRIRPAIQDDGGDIEFKGFDEETGNVFLKLQGACKTCSSSEDTLKNGIEQM 195
Query: 176 LNHFVPEVKDI 186
+ H++ V+++
Sbjct: 196 MKHYIDGVQEV 206
>gi|255713524|ref|XP_002553044.1| KLTH0D07458p [Lachancea thermotolerans]
gi|238934424|emb|CAR22606.1| KLTH0D07458p [Lachancea thermotolerans]
Length = 248
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 117/204 (57%), Gaps = 21/204 (10%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEG--AIHFSNAKEAEI--SPLASRIFS-IPGIAS 53
+ I++ TPN LKFI G+++ G ++ N E+ I SPLASR+F+ PG+ +
Sbjct: 21 LHIKSVSTPNENALKFISTDGELLQERGKPSVEIKNTDESLIKHSPLASRLFTQCPGVEA 80
Query: 54 VYFGYDFITVGKDQY-DWEHLRPPVLGMIMEHFISGDPII-------HNGGLG-DMKLDD 104
+ G DFITV KD+ W + P V+ ++ ++ SG + G+G D+ +
Sbjct: 81 LMIGDDFITVNKDEMVHWNQITPSVIDLLTQYLASGREAVTPEFFSVQEQGVGYDVNVPK 140
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCP 162
++ E + + I E++ R+RPA+ DGGDI ++GY + G V+L ++GAC C
Sbjct: 141 F---EYNEDEQEISDMIDELIQTRIRPAIMDDGGDIQYRGYDPQTGTVYLKLQGACKSCS 197
Query: 163 SASETLKYGVANILNHFVPEVKDI 186
S+ TLK+G+ ++L H++ EV+++
Sbjct: 198 SSEVTLKHGIESMLKHYIEEVENV 221
>gi|316971797|gb|EFV55531.1| putative HECT-domain protein [Trichinella spiralis]
Length = 626
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 63/144 (43%), Positives = 82/144 (56%), Gaps = 11/144 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M+IQ +TPNP +LKF+PG VL F N AE SPLA IF I G+ SV+FG DF
Sbjct: 1 MYIQVMETPNPHSLKFLPGIPVLPGRTAEFPNRPSAENSPLARAIFRIKGVKSVFFGEDF 60
Query: 61 ITVGKDQ--YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ DW ++P + IM+ F S II +DD D + D+ V
Sbjct: 61 ITVTKNSEVKDWVTMKPEIFSTIMDFFTSKQDII---------IDDSTEKDAADDDNDTV 111
Query: 119 QRIKEVLDNRVRPAVARDGGDIVF 142
IK++L+ R+RP V DGGD+VF
Sbjct: 112 AMIKDLLNTRIRPTVQDDGGDVVF 135
>gi|323332794|gb|EGA74199.1| Nfu1p [Saccharomyces cerevisiae AWRI796]
Length = 224
Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 110/191 (57%), Gaps = 19/191 (9%)
Query: 14 LKFIP--GQVVLVEGA--IHFSNAKEAEI--SPLASRIF-SIPGIASVYFGYDFITVGKD 66
LKF+ G+++ G+ I N E I S LA +IF PG+ S+ G DF+T+ KD
Sbjct: 3 LKFLSTDGEMLQTRGSKSIVIKNTDENLINHSKLAQQIFLQCPGVESLMIGDDFLTINKD 62
Query: 67 QY-DWEHLRPPVLGMIMEHFISGDPII--------HNGGLGDMKLDDMGSGDFIESDSAV 117
+ W ++P ++ ++ + G+ +I G G K++ M + E D V
Sbjct: 63 RMVHWNSIKPEIIDLLTKQLACGEDVISKEFHAVQEEEGEGGYKIN-MPKFELTEEDEEV 121
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ I+E++D R+RPA+ DGGDI ++G+ + G V+L ++GAC+ C S+ TLKYG+ ++
Sbjct: 122 SELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCSSSEVTLKYGIESM 181
Query: 176 LNHFVPEVKDI 186
L H+V EVK++
Sbjct: 182 LKHYVDEVKEV 192
>gi|254582903|ref|XP_002499183.1| ZYRO0E05830p [Zygosaccharomyces rouxii]
gi|238942757|emb|CAR30928.1| ZYRO0E05830p [Zygosaccharomyces rouxii]
Length = 254
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 110/200 (55%), Gaps = 17/200 (8%)
Query: 3 IQTEDTPNPATLKFIP--GQVVLVEGA--IHFSNAKEA--EISPLASRIF-SIPGIASVY 55
I+T TPN LKFI G+++ +G+ + N+ E+ E S LA RIF PG+ S+
Sbjct: 27 IKTMTTPNENALKFISTDGEMLQDKGSSSLEIKNSDESLIEHSNLAQRIFLQCPGVESLM 86
Query: 56 FGYDFITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMG------SG 108
G DF+TV KD W ++P V+ ++ SG+ ++ + ++ D G
Sbjct: 87 IGDDFLTVNKDSMVHWNQIKPGVIELLTSQLASGEDVVSDE-FHTIRDSDAGYEVTAPKF 145
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASE 166
+ E D V I E++ R+RPA+ DGGDI ++ Y + G V+L ++GAC C S+ +
Sbjct: 146 ELSEEDEEVSDMIDELIQTRIRPAIQDDGGDIQYRAYDPKTGTVYLKLQGACKSCSSSED 205
Query: 167 TLKYGVANILNHFVPEVKDI 186
TLK G+ +L H+V EV ++
Sbjct: 206 TLKAGIEGMLKHYVDEVTNV 225
>gi|327402876|ref|YP_004343714.1| nitrogen-fixing NifU domain-containing protein [Fluviicola
taffensis DSM 16823]
gi|327318384|gb|AEA42876.1| nitrogen-fixing NifU domain-containing protein [Fluviicola
taffensis DSM 16823]
Length = 201
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 108/192 (56%), Gaps = 11/192 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYDF 60
+ E TPNP T+KF+ + +L+ G ++ F + EA+ SPLA +F+ P + +V+ +F
Sbjct: 8 VYVEMTPNPNTMKFVANKYLLINGESVEFHSGSEAKGYSPLAEELFNFPFVKTVFITANF 67
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE-----SD 114
+TV K D W+ + + I + G I+ + K SGD + +
Sbjct: 68 VTVAKNDSISWDFVTMELREFIKSWIVDGKDILIQMPVAKPK---AASGDDSKPAKEYAP 124
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
S I+ +LD VRPAV DGG I F G+ +G V +++RGACSGCPS++ TLK G+ N
Sbjct: 125 SEYDDAIRSLLDEYVRPAVEGDGGAIDFVGFEEGTVTVALRGACSGCPSSTATLKGGIEN 184
Query: 175 ILNHFVPEVKDI 186
+L +P+VK++
Sbjct: 185 LLKQHLPDVKEV 196
>gi|71654974|ref|XP_816097.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70881201|gb|EAN94246.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 280
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 14/195 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG--AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ ++T +TPNP L+F ++ ++ ++ F NA A SPLA +FSI G+ +VY
Sbjct: 62 LLVETSETPNPDCLRFYSMELSFLKPGFSMDFPNAGHAYKSPLAEILFSIDGVEAVYIAD 121
Query: 59 DFITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG-----DFIE 112
++ITV K DW+ + P + I E S I+ G +++ SG + +
Sbjct: 122 EYITVRKGHLVDWDSILPMIKESIAEFAESKVNILSEEG------EELLSGHNEDTEPKD 175
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
D V+ +KE+L R+RP + DGG++ + DG VF+ + GAC CPSAS TLK G+
Sbjct: 176 DDDEVILAVKELLATRIRPMLQADGGNVRYLDMDDGTVFVLLEGACKSCPSASVTLKNGI 235
Query: 173 ANILNHFVPEVKDIR 187
+L H++PEV +++
Sbjct: 236 ERMLMHWIPEVVEVQ 250
>gi|322824715|gb|EFZ30028.1| hypothetical protein TCSYLVIO_3695 [Trypanosoma cruzi]
Length = 280
Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 109/195 (55%), Gaps = 14/195 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG--AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ ++T +TPNP L+F ++ ++ ++ F NA A SPLA +FSI G+ +VY
Sbjct: 62 LLVETSETPNPDCLRFYSMELSFLKPGFSMDFPNAGHAYKSPLAEILFSIDGVEAVYIAD 121
Query: 59 DFITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG-----DFIE 112
++ITV K DW+ + P + I E S I+ G +++ SG + +
Sbjct: 122 EYITVRKGHLVDWDAILPMIKESIAEFAESKVNILSEEG------EELLSGHNEDTEPKD 175
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
D V+ +KE+L R+RP + DGG++ + DG VF+ + GAC CPSAS TLK G+
Sbjct: 176 DDDEVILAVKELLATRIRPMLQADGGNVRYLDMDDGTVFVLLEGACKSCPSASVTLKNGI 235
Query: 173 ANILNHFVPEVKDIR 187
+L H++PEV +++
Sbjct: 236 ERMLMHWIPEVVEVQ 250
>gi|45185274|ref|NP_982991.1| ABR045Wp [Ashbya gossypii ATCC 10895]
gi|44980932|gb|AAS50815.1| ABR045Wp [Ashbya gossypii ATCC 10895]
Length = 239
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 109/199 (54%), Gaps = 14/199 (7%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEGA----IHFSNAKEAEISPLASRIFS-IPGIAS 53
+ I+T TPN LK++ G+++ GA I + + +PLA ++F+ +PG+ +
Sbjct: 20 LHIKTLTTPNENALKYVSTDGELLQERGAPSVEIRNFDMELIRQAPLAEKLFAQVPGVEA 79
Query: 54 VYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE 112
V G DF+TV KD + W + P VL ++ + SG + G + + + E
Sbjct: 80 VMIGDDFVTVSKDAELGWAQVTPRVLEVLTQQLASGQAAVQ----GQVAVGGTERFQYDE 135
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKY 170
+ + I+E++ RVRPA+ DGGDI ++G+ G V+L ++GAC C S+ TLK+
Sbjct: 136 EEQEISDTIEEIIQTRVRPAIMDDGGDIQYRGWDPETGRVYLKLQGACKSCSSSEVTLKH 195
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ ++L H+V EV + V
Sbjct: 196 GIESMLKHYVEEVSGVEQV 214
>gi|50312363|ref|XP_456215.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645351|emb|CAG98923.1| KLLA0F25476p [Kluyveromyces lactis]
Length = 256
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 110/202 (54%), Gaps = 16/202 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEAEI--SPLASRIFS-IPGIAS 53
+ I+T TPN LKF+ L++ ++ N E + +P S++F PG+ +
Sbjct: 28 IHIKTLTTPNENALKFVSTDGGLLQEKGTQSVEIKNTDEELLKHAPFPSKVFQQCPGVEA 87
Query: 54 VYFGYDFITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG---- 108
+ G DF+T+ KD+ W + P V+ ++++H SG P K ++G
Sbjct: 88 MMIGDDFVTINKDELIHWNQVTPTVIDLLVQHLASGKPTFLPDFFDVKKSSEVGYDVDIP 147
Query: 109 --DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSA 164
++ E + + + I E++ R+RPA+ DGGDI ++G+ G V+L ++GAC C S+
Sbjct: 148 KFEYDEDEQEISEMIDELIQTRIRPAIMDDGGDIQYRGWNPETGTVYLKLQGACKSCSSS 207
Query: 165 SETLKYGVANILNHFVPEVKDI 186
+TLK+G+ +L H++ EV+D+
Sbjct: 208 EDTLKHGIEAMLKHYIEEVEDV 229
>gi|262277769|ref|ZP_06055562.1| NifU domain protein [alpha proteobacterium HIMB114]
gi|262224872|gb|EEY75331.1| NifU domain protein [alpha proteobacterium HIMB114]
Length = 179
Score = 114 bits (285), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 103/187 (55%), Gaps = 15/187 (8%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
I DTPNP T KF+ Q ++ G+ F + ++ I L + +F I + VY +FI
Sbjct: 1 MINVVDTPNPDTKKFVFDQTIVKIGSKEFKKSDQSNID-LVNDLFLIKELELVYLDKNFI 59
Query: 62 TVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
++ K++ W+ + +L + + D + + E + +R
Sbjct: 60 SIKKNKDSSWDDIVQDILEALNKRISQN-------------FDALSFEEESEFTDDISKR 106
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I+EVL++++RPAVA DGGDI K ++DG+ + ++GAC+GCPS++ TLK+GV ++ H+V
Sbjct: 107 IEEVLNDKIRPAVAMDGGDIRLKSFKDGVAEVMLKGACAGCPSSTVTLKHGVERMIKHYV 166
Query: 181 PEVKDIR 187
PEV +
Sbjct: 167 PEVTSVE 173
>gi|330813331|ref|YP_004357570.1| hypothetical protein SAR11G3_00356 [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486426|gb|AEA80831.1| hypothetical protein SAR11G3_00356 [Candidatus Pelagibacter sp.
IMCC9063]
Length = 179
Score = 114 bits (285), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 102/189 (53%), Gaps = 14/189 (7%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
I DTPNP + KF+ ++ G+ + ++ + A ++F +Y +F+
Sbjct: 1 MITLTDTPNPESKKFVFDFDIVKSGSKEIKSIEDCKEIKFAEKLFDQVSPELIYIDSNFV 60
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
T+ K DW ++ +L ++ E ++ D + + E + QR
Sbjct: 61 TIKKKSSQDWNEIKENILKILSEE-VNAD------------FEALSFEKSFEFKDEISQR 107
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I+EVL++++RPAVA DGGDI K Y+DGIV + ++G+C+GCPS++ TLK GV ++ H+V
Sbjct: 108 IEEVLNDKIRPAVAMDGGDIQLKSYKDGIVEVMLKGSCAGCPSSTVTLKQGVERMIKHYV 167
Query: 181 PEVKDIRTV 189
PEV + V
Sbjct: 168 PEVNSVIAV 176
>gi|71662836|ref|XP_818418.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70883670|gb|EAN96567.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 280
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 108/195 (55%), Gaps = 14/195 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG--AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ ++T +TPNP L+F ++ ++ ++ F NA A SPLA +FSI G+ +VY
Sbjct: 62 LLVETSETPNPDCLRFYSMELSFLKPGFSMDFPNAGHAYKSPLAEILFSIDGVEAVYIAD 121
Query: 59 DFITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG-----DFIE 112
++ITV K DW+ + P + I E ++ G +D+ SG + +
Sbjct: 122 EYITVRKGHLVDWDAILPMIKESIEEFAERKMNVLSEEG------EDLLSGHNEDTEPKD 175
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
D V+ +KE+L R+RP + DGG++ + DG VF+ + GAC CPSAS TLK G+
Sbjct: 176 DDDEVILAVKELLATRIRPMLQADGGNVRYLDMDDGTVFVLLEGACKSCPSASVTLKNGI 235
Query: 173 ANILNHFVPEVKDIR 187
+L H++PEV +++
Sbjct: 236 ERMLMHWIPEVVEVQ 250
>gi|197106639|ref|YP_002132016.1| thioredoxin-like domain protein [Phenylobacterium zucineum HLK1]
gi|196480059|gb|ACG79587.1| thioredoxin-like domain protein [Phenylobacterium zucineum HLK1]
Length = 233
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 99/189 (52%), Gaps = 17/189 (8%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAK--EAEISPLASRIFSIPGIASVYFGY 58
M I TE TPNP KF+P L +G H + + SPLA+R+F++ + V
Sbjct: 1 MLILTETTPNPEARKFLP-HARLTDGTAHAFDRTGFDPAASPLAARLFALGSVRHVLIAE 59
Query: 59 DFITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
DF+TV + D W LR + I +H SG P + G ++ S
Sbjct: 60 DFVTVTRETDGEAWTTLRIKAIAEIADHLESGAPAVAAEGADPPDPEE----------SQ 109
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVAN 174
V I++VL VRP VARDGGD++F + G++++ M+GAC GCPS+ TLK G+
Sbjct: 110 VEGEIRQVLGLYVRPGVARDGGDVLFDRFEPDTGVLWIRMQGACGGCPSSRLTLKAGIEQ 169
Query: 175 ILNHFVPEV 183
I+ +VPEV
Sbjct: 170 IVRRYVPEV 178
>gi|154339123|ref|XP_001562253.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134062836|emb|CAM39281.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 282
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 106/195 (54%), Gaps = 10/195 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLV--EGAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ ++T +TPNP L+F + E ++ + A SPLA +F + G+ +++
Sbjct: 64 LVVETNETPNPDCLRFFSMDFSFLKPEFSMDIPSPAHAYKSPLAEALFGVAGVQAIFLAD 123
Query: 59 DFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE---SD 114
+++TV KD Q DW L + +I+E S + ++ G ++ MG D E D
Sbjct: 124 EYVTVRKDPQADWGALVHIIKEVIVEFAESKENVLSEAGEAEL----MGYNDDTEPNEDD 179
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
VV +KE+L R+RP + DGG++ F +G VFL + GAC CPS+ TLK G+
Sbjct: 180 DEVVLAVKELLATRIRPMLRADGGNVRFIDMDEGTVFLLLEGACKSCPSSHITLKSGIER 239
Query: 175 ILNHFVPEVKDIRTV 189
+L H++PEV +++ V
Sbjct: 240 MLMHWIPEVVEVQEV 254
>gi|91216703|ref|ZP_01253668.1| nifU related protein [Psychroflexus torquis ATCC 700755]
gi|91185172|gb|EAS71550.1| nifU related protein [Psychroflexus torquis ATCC 700755]
Length = 302
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 104/181 (57%), Gaps = 4/181 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNP+ +KF+ + +++E A F + +AE+SPLA ++F P + ++ ++I+
Sbjct: 111 VYAESTPNPSVMKFVANKKLVLESA-EFKSIDDAELSPLAQKLFHFPFVKEIFMDDNYIS 169
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
+ K D +WE + + G I ++ G I+ +G + K + + + + I
Sbjct: 170 INKYDMAEWEEITNELRGFIKDYLEEGGKILESGKVQSKKTEAPSPEIDTSNLDDISKEI 229
Query: 122 KEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
++L+ V+PAVA DGG+I+FK Y V + ++GACSGCPS++ TLK G+ ++L
Sbjct: 230 VQILEEYVKPAVASDGGNIMFKSYNAESKDVQVILQGACSGCPSSTITLKNGIESMLKEM 289
Query: 180 V 180
+
Sbjct: 290 L 290
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ + T P+ LKF + + + + N +EA SP+AS++F +P + +VY +FI
Sbjct: 6 VEIKPTNKPSILKFEFNEFLTKQKGYEYHNIEEAMKSPIASQLFYLPFVKTVYISQNFIA 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPII 92
+ K + +W ++ + +++H G I+
Sbjct: 66 IEKFNIVEWADVQNEISEQLLKHMNDGGKIV 96
>gi|255038627|ref|YP_003089248.1| nitrogen-fixing NifU domain-containing protein [Dyadobacter
fermentans DSM 18053]
gi|254951383|gb|ACT96083.1| nitrogen-fixing NifU domain protein [Dyadobacter fermentans DSM
18053]
Length = 198
Score = 110 bits (276), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 104/195 (53%), Gaps = 16/195 (8%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHF------SNAKEAEISPLASRIFSIPGIASV 54
+F+ TE +PNP ++KF+ LV + F + +E + SPLA+ +F P + V
Sbjct: 6 VFVYTELSPNPNSMKFVLN-FELVPDGLSFDYPSLEAALEEGKASPLAADLFQFPHVKRV 64
Query: 55 YFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES 113
+ +FIT+ K D WE + I +F P+ + K D +
Sbjct: 65 FIASNFITITKGDDIAWEEVLRDTKQFIKIYFEENHPVF------EQKTIDTNTLIVDAR 118
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG--IVFLSMRGACSGCPSASETLKYG 171
DS VQ+IK LD VRPAV DGG I F + +G +V + ++G+CSGCPS++ TLK G
Sbjct: 119 DSDTVQKIKAALDQYVRPAVESDGGAINFHSFDEGSGVVKVLLQGSCSGCPSSTLTLKAG 178
Query: 172 VANILNHFVPEVKDI 186
+ N+L VP+VK++
Sbjct: 179 IENLLTRMVPDVKEV 193
>gi|149525599|ref|XP_001517848.1| PREDICTED: similar to HIRA interacting protein 5 [Ornithorhynchus
anatinus]
Length = 180
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 91/154 (59%), Gaps = 10/154 (6%)
Query: 39 SPLASR-IFSIPGIASVYFGYDFITVGKDQ--YDWEHLRPPVLGMIMEHFISGDPIIHNG 95
S ASR +F I G+ SV+ G DFITV K+ DW L+P + IM+ F SG P++
Sbjct: 25 SGFASRHLFRIEGVKSVFLGPDFITVTKENEDVDWNLLKPDIYATIMDFFASGLPVVTE- 83
Query: 96 GLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMR 155
+ + ES AVV I+ +L + RP V DGGD++++G+ DG+V L ++
Sbjct: 84 -----EAPSAEAARARESKDAVVL-IERLLSSMARPTVQEDGGDVIYRGFEDGVVQLKLQ 137
Query: 156 GACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
G+C+ CPS+ TLK G+ N+L ++PEV+ + V
Sbjct: 138 GSCTSCPSSIVTLKSGIQNMLQFYIPEVEGVEQV 171
>gi|312129640|ref|YP_003996980.1| nitrogeN-fixing nifu domain protein [Leadbetterella byssophila DSM
17132]
gi|311906186|gb|ADQ16627.1| nitrogen-fixing NifU domain protein [Leadbetterella byssophila DSM
17132]
Length = 199
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 98/193 (50%), Gaps = 14/193 (7%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGA-----IHFSNAKEAEISPLASRIFSIPGIASVYFG 57
I TE +PNP ++KF+ ++ EG S E + SPLAS +F + V+
Sbjct: 8 IYTELSPNPNSMKFVLNYEIVPEGLSFDYPTKASTFDEKKASPLASDLFLFDFVERVFIS 67
Query: 58 YDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
+FIT+ K DW+ + V I +F P+ + L GS DS
Sbjct: 68 SNFITLTKRGDIDWDDVLGDVRQFIKTYFDENHPVFAQKTIDSHTLIVQGS------DSE 121
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVAN 174
VV +IK LD VRPAV DGG I F + + G V + ++G+CSGCPSAS TLK G+
Sbjct: 122 VVAKIKSTLDQYVRPAVESDGGAINFSSFEEESGTVKVLLQGSCSGCPSASLTLKAGIER 181
Query: 175 ILNHFVPEVKDIR 187
+L +PEVK +
Sbjct: 182 LLTTMIPEVKSVE 194
>gi|325286802|ref|YP_004262592.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga lytica
DSM 7489]
gi|324322256|gb|ADY29721.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga lytica
DSM 7489]
Length = 300
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 101/181 (55%), Gaps = 4/181 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E+TPNPA ++F+ +++ V F N +EA+ S LA+ +F P + V+ ++I+
Sbjct: 109 VYAENTPNPAAMRFVANKLI-VPTIFEFKNKEEAKDSDLATTLFQFPYVKEVFLDENYIS 167
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K D+ DW + + I G ++ + K + + E+ ++I
Sbjct: 168 VTKTDEADWNEITLELRESIQAFLTEGKEVVSANSISKQKQEAPATQLQDENLDDTSKQI 227
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANILNHF 179
++L+ V+PAVA DGG+I+FK Y + V + ++GACSGCPS++ TLK G+ N+L +
Sbjct: 228 IDILEEYVKPAVASDGGNIMFKSYDENTKKVNVILQGACSGCPSSTFTLKNGIENMLKNM 287
Query: 180 V 180
+
Sbjct: 288 M 288
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 8 TPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK-D 66
T NPA LKF + + + N EA+ SPLA ++F +P I +VY +FI + + D
Sbjct: 11 TTNPAILKFETNHFITKNNSYEYKNIDEAKNSPLAQQLFYLPFIKTVYISGNFIALERFD 70
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIH 93
W+ +R V ++++ SG+ ++H
Sbjct: 71 IVAWDDVRDEVAQQLVDYLNSGEVVVH 97
>gi|209883397|ref|YP_002287254.1| nifu protein [Oligotropha carboxidovorans OM5]
gi|209871593|gb|ACI91389.1| nifu protein [Oligotropha carboxidovorans OM5]
Length = 210
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 82/133 (61%), Gaps = 5/133 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE+TP+P +KF+PG+ VL EG ++ + + A SPLA ++F+IPG+A V D
Sbjct: 1 MFIQTEETPDPERMKFLPGREVLPEGTLNLKSREHAGSSPLAEQLFAIPGVAGVLLNKDS 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
I V + DW+HL+P +LG+IMEHF+SG P++ + + G E+D+ R
Sbjct: 61 IVVTRSDSDWQHLKPAILGVIMEHFMSGAPVLRAPPAAPERTAESDGG---ETDA--TGR 115
Query: 121 IKEVLDNRVRPAV 133
I+E L + P +
Sbjct: 116 IREALRKVIDPEL 128
>gi|227536308|ref|ZP_03966357.1| nifU domain protein [Sphingobacterium spiritivorum ATCC 33300]
gi|300772344|ref|ZP_07082214.1| NifU domain protein [Sphingobacterium spiritivorum ATCC 33861]
gi|227243915|gb|EEI93930.1| nifU domain protein [Sphingobacterium spiritivorum ATCC 33300]
gi|300760647|gb|EFK57473.1| NifU domain protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 184
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 105/175 (60%), Gaps = 12/175 (6%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ TE TPNPAT+KF+ ++ L+ G++ + N ++A+ SP A +F + V+F +F+T
Sbjct: 6 VYTESTPNPATMKFLVNKL-LINGSLDYPNKEKAQESPFAFELFKFNFVTGVFFASNFVT 64
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
+ K D +W + I++ F+ G + + ++ D+ + + E V +I
Sbjct: 65 ITKSDDVEWSDIEA-----ILKDFVKG-AVESELAVKEVHHDEDTNFEGTE----VEVKI 114
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++VL + VRPAV +DGG I +K + +GIV + +RG+CSGCPS++ TLK G+ +L
Sbjct: 115 QQVLHDYVRPAVEQDGGAIHYKSFDNGIVTVELRGSCSGCPSSTITLKSGIEGLL 169
>gi|50292835|ref|XP_448850.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528163|emb|CAG61820.1| unnamed protein product [Candida glabrata]
Length = 263
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 28/206 (13%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEAEIS--PLASRIFS-IPGIASVY 55
IQT TPN LKF+ L++ +I N + IS LAS+IF+ PG+ S+
Sbjct: 26 IQTLTTPNENALKFLNKDNELLQTRGSKSIVIKNTDQNLISHSDLASKIFAQCPGVESLM 85
Query: 56 FGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNG------------GLGDMKL 102
G DF+TV KD Q W ++ V+ ++ + SG +I + + +MK
Sbjct: 86 IGDDFLTVNKDSQVPWAQIQSDVIDLLTQQLASGKNVISDEFHAIKEDNEAGYQINEMKF 145
Query: 103 DDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSG 160
D E D + + I+E+++ R+RPA+ DGGDI F+G+ G V+L ++GAC+
Sbjct: 146 D------LTEEDEEIKELIEELIETRIRPAILEDGGDIDFRGWDPESGTVYLKLQGACTS 199
Query: 161 CPSASETLKYGVANILNHFVPEVKDI 186
C S+ TLKYG+ ++L H+V EVK++
Sbjct: 200 CSSSEVTLKYGIESMLKHYVDEVKEV 225
>gi|261329222|emb|CBH12201.1| HIRA-interacting protein 5, putative [Trypanosoma brucei gambiense
DAL972]
Length = 280
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 106/190 (55%), Gaps = 4/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE--GAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ ++ +TPNP L+F ++ + ++ +A+ A SPLA +FSI G+ SV+
Sbjct: 61 IVVEKNETPNPDCLRFYSMELSFLPPGRSLDLPDAQHAGKSPLAELLFSISGVQSVFLAD 120
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
++ITVGK DW L P + I+E SG I+ G +D+ D + D V
Sbjct: 121 EYITVGKVPHVDWGSLVPQIQECIVEFAESGVGILSEEGEACF-VDNNNDTDPEDDDDEV 179
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +KE+L R+RP + DGG++ + DG VF+ + GAC CPS+ TLK G+ +L
Sbjct: 180 VLAVKELLSARIRPLLRADGGNVRYISMDDGTVFVLLEGACKSCPSSGVTLKNGIERMLM 239
Query: 178 HFVPEVKDIR 187
H++PEV +++
Sbjct: 240 HWIPEVVEVQ 249
>gi|146299436|ref|YP_001194027.1| NifU domain-containing protein [Flavobacterium johnsoniae UW101]
gi|146153854|gb|ABQ04708.1| nitrogen-fixing NifU domain protein [Flavobacterium johnsoniae
UW101]
Length = 299
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 95/178 (53%), Gaps = 4/178 (2%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TPNPA LKF+ ++ L A+ + N + SPLA +F P + V+ ++I+V K
Sbjct: 111 ETTPNPAALKFVVSRM-LTRNAVEYKNIDQTASSPLAQELFKFPYVKEVFIDENYISVTK 169
Query: 66 DQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEV 124
+ DW+ + + I + +G ++ + +D+ + + Q+I +
Sbjct: 170 YEINDWQEITLELRTFIKQFIENGGTVLDESLIQTATKNDVTKDEAFDKLDVTSQQIINI 229
Query: 125 LDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
L+ V+PAVA DGG+I F Y D V + ++GACSGCPS++ TLK G+ N+L +
Sbjct: 230 LEEYVKPAVAADGGNIAFDSYNEDDKTVKVILQGACSGCPSSTFTLKSGIENMLKSML 287
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I ++T NP LKF + + F N EA+ SPLA ++F +P + +VY +FI
Sbjct: 4 ITIKETQNPTILKFEFEDFITQNQSFEFKNIDEAQASPLAQQLFYLPFVKTVYISGNFIA 63
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIH 93
+ + DW+ ++ V I G II
Sbjct: 64 IERYSIVDWDDVKDAVAEQITSFVDKGGVIIK 95
>gi|332291487|ref|YP_004430096.1| nitrogen-fixing NifU domain protein [Krokinobacter diaphorus
4H-3-7-5]
gi|332169573|gb|AEE18828.1| nitrogen-fixing NifU domain protein [Krokinobacter diaphorus
4H-3-7-5]
Length = 300
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 101/182 (55%), Gaps = 4/182 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNP+TLKF+ + LV A F + + +P+A +F +P + V+F ++I+
Sbjct: 109 VYAESTPNPSTLKFVANKK-LVTTAFEFKSIDDTANAPMAKALFHLPYVKEVFFDENYIS 167
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K D +W+ + I ++ G I+ L + + + + E+ + + I
Sbjct: 168 VQKYDVAEWDEVVTETREFIRDYIQDGKEIVTAAQLKTPQQAEAIAEEKFETLDDISKEI 227
Query: 122 KEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+++ V+PAVA DGG+I+FK Y + V + ++GACSGCPS++ TLK G+ N+L
Sbjct: 228 VNIIEEYVKPAVASDGGNIMFKNYDPKTQNVSVILQGACSGCPSSTFTLKNGIENMLKQM 287
Query: 180 VP 181
+P
Sbjct: 288 LP 289
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E T NPA KF Q ++ + F N EA SPLA ++F +P + +VY +F+
Sbjct: 6 ISVEGTSNPAIKKFQADQFLVNHNSYEFKNIDEAANSPLAQQLFYLPFVKTVYITQNFVA 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHF 85
+ K + +W ++ V I ++
Sbjct: 66 IEKYNIVEWIDVQQEVANQIEDYL 89
>gi|221103919|ref|XP_002156303.1| PREDICTED: similar to GK25604 [Hydra magnipapillata]
Length = 192
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 103/192 (53%), Gaps = 14/192 (7%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIH-----FSNAKEAEISPLASRIFSIPGIASVYFG 57
I TE +PNP ++KF+ + EG S +E++ SPLA +F P + ++
Sbjct: 2 IYTELSPNPNSMKFVLNFELAPEGLTFDYPSLASTVEESKASPLAGDLFQFPFVRRIFIA 61
Query: 58 YDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
+FIT+ KD + +WE + + + F +P+ + D + +DSA
Sbjct: 62 SNFITITKDDETEWEDIVYDIKKFMKIFFEQNNPVFAQKTI------DKNTLIVDANDSA 115
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVAN 174
V+ +IK LD VRPAV DGG I F + + G V + ++G+CSGCPS++ TLK G+
Sbjct: 116 VIAKIKSTLDQYVRPAVESDGGAINFASFDEISGQVKVYLQGSCSGCPSSTVTLKDGIER 175
Query: 175 ILNHFVPEVKDI 186
+L VPEVK++
Sbjct: 176 LLKTMVPEVKEV 187
>gi|72391004|ref|XP_845796.1| HIRA-interacting protein 5 [Trypanosoma brucei TREU927]
gi|62176423|gb|AAX70531.1| HIRA-interacting protein 5, putative [Trypanosoma brucei]
gi|70802332|gb|AAZ12237.1| HIRA-interacting protein 5, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 280
Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 106/190 (55%), Gaps = 4/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE--GAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ ++ +TPNP L+F ++ + ++ +A+ A SPLA +FSI G+ SV+
Sbjct: 61 IVVEKNETPNPDCLRFYSMELSFLPPGRSLDLPDAQHAGKSPLAELLFSISGVQSVFLAD 120
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
++ITVGK DW L P + I+E SG ++ G +D+ D + D V
Sbjct: 121 EYITVGKVPHVDWGSLVPQIQECIVEFAESGVGVLSEEGEACF-VDNNNDTDPEDDDDEV 179
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +KE+L R+RP + DGG++ + DG VF+ + GAC CPS+ TLK G+ +L
Sbjct: 180 VLAVKELLSARIRPLLRADGGNVRYISMDDGTVFVLLEGACKSCPSSGVTLKNGIERMLM 239
Query: 178 HFVPEVKDIR 187
H++PEV +++
Sbjct: 240 HWIPEVVEVQ 249
>gi|305665213|ref|YP_003861500.1| NifU-like protein [Maribacter sp. HTCC2170]
gi|88709966|gb|EAR02198.1| nifU related protein [Maribacter sp. HTCC2170]
Length = 300
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNP+ +KF+ + + V A F N EA+ S LA ++F +P + V+F ++++
Sbjct: 109 VYAEVTPNPSVMKFVSNKRI-VPTAFEFKNIDEAKDSALAQQLFQLPFVKEVFFDENYVS 167
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K D +WE + P+ M+ + G+ ++ + + S ES ++I
Sbjct: 168 VNKFDVAEWEDITMPLREMVRDFLAEGNEVVTVSAITLKSAEAPKSQLNNESLDDTSKQI 227
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHF 179
++L+ V+PAVA DGG+I+F+ Y V + ++GACSGCPS++ TLK G+ +L +
Sbjct: 228 VDILEEYVKPAVASDGGNILFQSYEKDTKTVNVILQGACSGCPSSTFTLKNGIETMLKNM 287
Query: 180 V 180
+
Sbjct: 288 M 288
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I + T NPA LKF + F N EA+ SPLA ++F +P I +VYF +FI
Sbjct: 6 ITVKQTNNPAVLKFETNHFITKNNNYEFKNIDEAKNSPLAQQLFYLPFIKTVYFSGNFIG 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPII 92
+ + D +W ++ V ++E+ SG+PI+
Sbjct: 66 LERFDIVEWADVKDEVAQQLVEYLNSGEPIV 96
>gi|322492565|emb|CBZ27842.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 281
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 106/192 (55%), Gaps = 4/192 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLV--EGAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ ++T +TPNP ++F + + E ++ + +A SPLA +F + G+ +V+
Sbjct: 63 IVVETNETPNPDCIRFFSMDISFLKPEFSVDIPSPAQAYKSPLAEALFGVAGVQAVFLAD 122
Query: 59 DFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+++TV K Q DW L P + +I+E S + ++ G ++ L + E D V
Sbjct: 123 EYVTVRKHPQEDWAALMPIIKEVIVEFAESKENVLSAAGEEEL-LGYNNDTEPDEDDDEV 181
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +KE+L R+RP + DGG++ F +G VFL + GAC CPS+ TLK G+ +L
Sbjct: 182 VLAVKELLATRIRPMLRADGGNVRFIDMDEGTVFLLLEGACKSCPSSHITLKSGIERMLM 241
Query: 178 HFVPEVKDIRTV 189
H++PEV + + V
Sbjct: 242 HWIPEVVEAQEV 253
>gi|86130774|ref|ZP_01049373.1| NifU-like protein [Dokdonia donghaensis MED134]
gi|85818185|gb|EAQ39345.1| NifU-like protein [Dokdonia donghaensis MED134]
Length = 300
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 100/182 (54%), Gaps = 4/182 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNP+T+KF+ + LV + F + + +P+A +F P + V+F ++I+
Sbjct: 109 VYAESTPNPSTIKFVANKK-LVTTSFEFKSIDDTANAPMAKALFHFPFVKEVFFDENYIS 167
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K D +W+ + I ++ G I+ L + D + + E+ V + I
Sbjct: 168 VQKYDMAEWDEVVTETREFIRDYIQDGKEIVTAEQLKTPQQVDAIAEEKFETLDDVSKEI 227
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLS--MRGACSGCPSASETLKYGVANILNHF 179
+++ V+PAVA DGG+IVFK Y + +S ++GACSGCPS++ TLK G+ N+L
Sbjct: 228 VNIIEEYVKPAVASDGGNIVFKHYDEKTQNVSVILQGACSGCPSSTFTLKNGIENMLKQM 287
Query: 180 VP 181
+P
Sbjct: 288 LP 289
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E T NPA KF Q ++ + F N EA SPLA ++F +P + +VY +F+
Sbjct: 6 ISVEGTSNPAIKKFQADQFLVNHNSYEFKNIDEAANSPLAQQLFYLPFVKTVYIAQNFVA 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHF 85
+ K + +W ++ V + ++
Sbjct: 66 IEKYNIVEWIDVQQEVANQVEDYL 89
>gi|313677059|ref|YP_004055055.1| scaffold protein nfu/nifu [Marivirga tractuosa DSM 4126]
gi|312943757|gb|ADR22947.1| Scaffold protein Nfu/NifU [Marivirga tractuosa DSM 4126]
Length = 198
Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 11/190 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
I E PNP +LKF Q+++ EG + F + ++ +PLA +F + V++ +FI
Sbjct: 11 IYMEANPNPNSLKFATNQMLVPEGDSFDFPSIEDTAQAPLAEILFKKEYVDRVFYMSNFI 70
Query: 62 TVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
TV K +Y+W ++ V I E SG +I +++ D+ ++ + ++
Sbjct: 71 TVTKKPEYEWVEIQNDVKDTIKEFLESGKRVI------ELQAKDLFEETNTSENAELEEQ 124
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANILNH 178
IK +LD ++PAV +DGG I F Y V L ++GACSGCPS++ TLK G+ N+L
Sbjct: 125 IKNILDEYIKPAVEQDGGAISFHSYEKDTQRVNLLLQGACSGCPSSTITLKAGIENLLKR 184
Query: 179 FVP-EVKDIR 187
+P +VK+++
Sbjct: 185 MLPNDVKEVQ 194
>gi|157870953|ref|XP_001684026.1| hypothetical protein [Leishmania major strain Friedlin]
gi|68127094|emb|CAJ04535.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 240
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 107/192 (55%), Gaps = 4/192 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLV--EGAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ ++T +TPNP ++F + + E ++ ++ +A SPLA +F + G+ +V+
Sbjct: 22 IVVETNETPNPDCMRFFSMDLSFLKPEFSMDITSPAQAYKSPLAEALFGVAGVQAVFLAD 81
Query: 59 DFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+++TV K Q DW L P + +I+E S + ++ G ++ L + E D V
Sbjct: 82 EYVTVRKHPQADWAALIPIIKEVIVEFAESKENVLSAAGEEEL-LGYNNDTEPDEDDDEV 140
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +KE+L R+RP + DGG++ F +G VFL + G+C CPS+ TLK G+ +L
Sbjct: 141 VLAVKELLATRIRPMLRADGGNVRFIDMDEGTVFLLLEGSCKSCPSSHITLKSGIERMLM 200
Query: 178 HFVPEVKDIRTV 189
H++PEV + + V
Sbjct: 201 HWIPEVVEAQEV 212
>gi|146089377|ref|XP_001470367.1| hypothetical protein [Leishmania infantum JPCM5]
gi|134070400|emb|CAM68738.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 284
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 107/195 (54%), Gaps = 10/195 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLV--EGAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ ++T +TPNP ++F V + E ++ + +A SPLA +F + G+ +V+
Sbjct: 66 IVVETNETPNPDCMRFFSMDVSFLKPEFSMDIPSPAQAYKSPLAEALFGVAGVQAVFLAD 125
Query: 59 DFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE---SD 114
+++TV K Q DW L P + +I+E S + ++ G ++ +G + E D
Sbjct: 126 EYVTVRKHPQADWAALIPIIKEVIVEFAESKENVLSAAGEEEL----LGYNNDTEPDDDD 181
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
VV +KE+L R+RP + DGG++ F +G VFL + G+C CPS+ TLK G+
Sbjct: 182 DEVVLAVKELLATRIRPMLRADGGNVRFIDMDEGTVFLLLEGSCKSCPSSHVTLKSGIER 241
Query: 175 ILNHFVPEVKDIRTV 189
+L H++PEV + + V
Sbjct: 242 MLMHWIPEVVEAQEV 256
>gi|322499834|emb|CBZ34907.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 284
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 107/195 (54%), Gaps = 10/195 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLV--EGAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ ++T +TPNP ++F V + E ++ + +A SPLA +F + G+ +V+
Sbjct: 66 IVVETNETPNPDCMRFFSMDVSFLKPEFSMDIPSPAQAYKSPLAEALFGVAGVQAVFLAD 125
Query: 59 DFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE---SD 114
+++TV K Q DW L P + +I+E S + ++ G ++ +G + E D
Sbjct: 126 EYVTVRKHPQADWAALIPIIKEVIVEFAESKENVLSAAGEEEL----LGYNNDTEPDDDD 181
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
VV +KE+L R+RP + DGG++ F +G VFL + G+C CPS+ TLK G+
Sbjct: 182 DEVVLAVKELLATRIRPMLRADGGNVRFIDMDEGTVFLLLEGSCKSCPSSHVTLKSGIER 241
Query: 175 ILNHFVPEVKDIRTV 189
+L H++PEV + + V
Sbjct: 242 MLMHWIPEVVEAQEV 256
>gi|320584117|gb|EFW98328.1| hypothetical protein HPODL_0008 [Pichia angusta DL-1]
Length = 250
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 18/204 (8%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLV----EGAIHFSNAKEA-EISPLASRIFSIPGIASVY 55
+ ++T TPN LKFI + A+ ++ EA + SPLAS +F + G+ S+
Sbjct: 24 LSLKTVGTPNENALKFISTDFNFLPESLTSAVEVNDLPEASQRSPLASELFKLNGVKSLL 83
Query: 56 FGYDFITVGK--------DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGS 107
G++FITV K W+ L V+ +I S P+++ L ++
Sbjct: 84 IGHNFITVNKVDPELSNNPDLHWDSLSTKVMNVITNAVDSNIPVLNPEYLDEIV---RKQ 140
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSAS 165
+ E D V IKE+++ R+RPA+ DGGDI F+ + G V+L ++GAC C +
Sbjct: 141 DEAQEDDDDVTYEIKELINTRIRPALQDDGGDIHFRSFDAESGTVYLKLQGACKSCSLSE 200
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
+TLK G+ ++L H++PEV++++ V
Sbjct: 201 DTLKNGIESMLKHYIPEVEEVKAV 224
>gi|332877772|ref|ZP_08445513.1| NifU-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684352|gb|EGJ57208.1| NifU-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 298
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 5/178 (2%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIF-SIPGIASVYFGYDFITV 63
TE TPNPA +KF+ + LV I + +A EA +PLA +F + P I V+F D+I+V
Sbjct: 110 TETTPNPAVMKFVANKR-LVPTIIEYKSATEAAEAPLAQALFQAFPFITEVFFDNDYISV 168
Query: 64 GK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIK 122
K D DWE P + I ++ + +I+ + + + + Q+I
Sbjct: 169 TKTDTADWEEESPRLRAFIKDYLAAEKTVINISEVKKWQTAVQAHLLSKVTTDPISQQIV 228
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANILNH 178
+++ V+PAVA DGG+I F Y+ V + ++GACSGCPS+++TLK G+ IL +
Sbjct: 229 AIIEEHVKPAVASDGGNIQFISYQPDTHHVEVLLQGACSGCPSSTQTLKKGIEAILKN 286
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ + T NP +K + LV+G+ + N EA+ +PLA +F +P I +VY +FI
Sbjct: 6 LTVQPTANPDIIK-LEANRPLVKGSYEYKNVDEAKNAPLAKELFYLPFIKTVYISSNFIA 64
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHN 94
+ + +W+ ++ V I + SG P+++N
Sbjct: 65 LKRFPIIEWKDVQEEVAQQIAVYLQSGRPLVNN 97
>gi|254495078|ref|ZP_05108002.1| NifU-like protein [Polaribacter sp. MED152]
gi|85819428|gb|EAQ40585.1| NifU-like protein [Polaribacter sp. MED152]
Length = 301
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 105/189 (55%), Gaps = 18/189 (9%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYDFI 61
+ E TPNPA +KF + L + + + N +EA + SPLA IF+ P + V+ ++I
Sbjct: 110 VYAEVTPNPAVMKFGTNKA-LTQTDVEYKNIEEASKSSPLAQAIFNFPFVKEVFISDNYI 168
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ- 119
+V K D +W + V I E+ + G II + L + + E + VV+
Sbjct: 169 SVTKYDMVEWNEVFAEVRSFIREYLVDGKTIIKD-------LPTVETSKTPEVVAPVVEL 221
Query: 120 -----RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGV 172
+I ++LD ++PAVA DGG+I F+ Y ++ +V + ++GACSGCPS++ TLK G+
Sbjct: 222 EGIPAQISDILDEYIKPAVAGDGGNIAFRSYDEQNKVVSVILQGACSGCPSSTATLKNGI 281
Query: 173 ANILNHFVP 181
++L +P
Sbjct: 282 ESLLKEMLP 290
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I ++T N LKF +V++ G+ FSN EA+ SPLA ++F +P + V+ +FI
Sbjct: 6 ITIQETTNETILKFNSTKVLINGGSYEFSNIDEAKNSPLAQQLFYLPFVKKVFITANFIA 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHN 94
+ + D +W ++ V I E +IS I+ N
Sbjct: 66 IQRFDIVEWADVQDEVAEQI-EAYISDGNIVVN 97
>gi|225012214|ref|ZP_03702651.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-2A]
gi|225003769|gb|EEG41742.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-2A]
Length = 295
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 102/182 (56%), Gaps = 8/182 (4%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNPA +KF+ + LV ++ F N EA+ +PLA ++F +P + V+ ++++
Sbjct: 108 VYAESTPNPAVMKFVANKP-LVSHSVEFKNIDEAKNAPLAQKLFHLPFVKEVFIDANYVS 166
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
+ K + +WE + V I G+ I+ + +++D + +A ++I
Sbjct: 167 ITKFEVTEWEEVVMEVREFIRAFIEEGNVILTEAPIA-IEIDQKNQSSNL---TATEEQI 222
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+LD ++PAVA DGG+I+F Y + V + ++GACSGCPS++ TLK G+ +L
Sbjct: 223 VSILDEYIKPAVASDGGNIMFDSYDEVEKEVHVVLQGACSGCPSSTFTLKNGIETMLKEM 282
Query: 180 VP 181
+P
Sbjct: 283 MP 284
>gi|299132121|ref|ZP_07025316.1| Scaffold protein Nfu/NifU [Afipia sp. 1NLS2]
gi|298592258|gb|EFI52458.1| Scaffold protein Nfu/NifU [Afipia sp. 1NLS2]
Length = 213
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 75/131 (57%), Gaps = 4/131 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE+T + L+F+PG+ VL EG ++ ++A SPLA ++F+IPG+A V D
Sbjct: 1 MFIQTEETQDSERLRFLPGREVLPEGTLNLKTKEQAASSPLAEQLFTIPGVAGVLLNKDS 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
I V + DW+HL+P +LG IMEHF+SG P++ G E D+ +
Sbjct: 61 IVVTRSGSDWQHLKPAILGAIMEHFMSGAPVVRTPPGASAHASASGE----EGDATATGQ 116
Query: 121 IKEVLDNRVRP 131
I+E L + P
Sbjct: 117 IREALRRVIDP 127
>gi|88802135|ref|ZP_01117663.1| NifU protein [Polaribacter irgensii 23-P]
gi|88782793|gb|EAR13970.1| NifU protein [Polaribacter irgensii 23-P]
Length = 301
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 102/188 (54%), Gaps = 13/188 (6%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEIS-PLASRIFSIPGIASVYFGYDFI 61
+ E TPNPA +KF + L + + F N EA S PLA IF+ P + V+ ++I
Sbjct: 109 VYAEVTPNPAVMKFGTNKA-LTQTDVEFKNIDEASASSPLAQAIFNFPFVQQVFISDNYI 167
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ- 119
+V K D +W + V I E+ G II K + + + + + V++
Sbjct: 168 SVTKYDMVEWNEVYGEVRTFIREYLADGKTIIKELP----KEEVVETANKAQEPEVVLEG 223
Query: 120 ---RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVAN 174
+I ++LD ++PAVA DGG+I F+ Y + +V + ++GACSGCPS++ TLK G+ N
Sbjct: 224 ISAQIVDILDEYIKPAVASDGGNIAFRSYDEQTKVVRVILQGACSGCPSSTATLKNGIEN 283
Query: 175 ILNHFVPE 182
+L +P+
Sbjct: 284 LLKEMLPD 291
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I ++T N +K+ +++ G+ F+N EA+ SPLA +F +P + V+ +FI
Sbjct: 6 ITIQETTNNTIIKYNSNTILINGGSYEFNNIDEAKNSPLAQELFYLPFVKKVFITANFIA 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHN 94
+ + D +W ++ V I E F++ I+ N
Sbjct: 66 IQRFDILEWIDVQEEVKEQI-EAFLNDGNIVVN 97
>gi|124006329|ref|ZP_01691163.1| NifU domain protein [Microscilla marina ATCC 23134]
gi|123987986|gb|EAY27657.1| NifU domain protein [Microscilla marina ATCC 23134]
Length = 197
Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 104/190 (54%), Gaps = 11/190 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGA-IHFSNAKEAEISPLASRIFS-IPGIASVYFGYDF 60
I TE PNP +LK++ +++ +G F +A+ A+ SPLA+ +FS + V+ +F
Sbjct: 11 IYTESNPNPNSLKYVINYMLVPDGTTFDFPDAETAQQSPLATELFSKFSYVDRVFMMSNF 70
Query: 61 ITV-GKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K++ DW + V + + P++ + D + + + + +
Sbjct: 71 VTVTKKEEADWHDVAGEVKEFLQGYLEEQKPLLTQD------IQDEYDKELNKDEPEIDR 124
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK +L+ VRPAV DGG I F Y +G V + ++G+CSGCPS+ TLK G+ N+L
Sbjct: 125 KIKGILEEYVRPAVESDGGAINFHSYENGTVKVLLQGSCSGCPSSMVTLKSGIENLLKRM 184
Query: 180 VPEVKDIRTV 189
+PE D++ V
Sbjct: 185 LPE--DVKEV 192
>gi|90076830|dbj|BAE88095.1| unnamed protein product [Macaca fascicularis]
Length = 199
Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 79/133 (59%), Gaps = 12/133 (9%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT++TPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 59 MFIQTQNTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 118
Query: 61 ITVGKDQ--YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF-IESDSAV 117
ITV K+ DW L+P + IM+ F SG P++ ++ SG+ E D V
Sbjct: 119 ITVTKENEDLDWNLLKPDIYATIMDFFASGLPLV---------TEETPSGEAGSEEDDEV 169
Query: 118 VQRIKEVLDNRVR 130
V IKE+LD R+R
Sbjct: 170 VAMIKELLDTRIR 182
>gi|284037367|ref|YP_003387297.1| nitrogen-fixing NifU domain protein [Spirosoma linguale DSM 74]
gi|283816660|gb|ADB38498.1| nitrogen-fixing NifU domain protein [Spirosoma linguale DSM 74]
Length = 200
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 101/193 (52%), Gaps = 21/193 (10%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAK------EAEISPLASRIFSIPGIASVYF 56
I TE +PNP ++KF+ LV + F A + + SPLA +F + V+
Sbjct: 11 IFTEGSPNPNSMKFV-VNFELVPTGLSFDYATPGDALLDGKASPLAVALFGFEFVRRVFI 69
Query: 57 GYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGL--GDMKLDDMGSGDFIES 113
+F+TV KD + DW+ + V + ++F P+ + KLD
Sbjct: 70 SANFVTVTKDDETDWDEVLLEVKLFLKDYFGEQKPVFSQRTVDTNTTKLD---------M 120
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYG 171
DS VQ+IK VL+ ++PAV DGG I F + + G V + ++G+CSGCPS++ TLK G
Sbjct: 121 DSETVQKIKAVLEQYIKPAVESDGGAISFYSFDEPSGTVKVLLQGSCSGCPSSTLTLKAG 180
Query: 172 VANILNHFVPEVK 184
+ N+L VPEVK
Sbjct: 181 IENLLTRLVPEVK 193
>gi|163786509|ref|ZP_02180957.1| thioredoxin-related protein [Flavobacteriales bacterium ALC-1]
gi|159878369|gb|EDP72425.1| thioredoxin-related protein [Flavobacteriales bacterium ALC-1]
Length = 300
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 98/181 (54%), Gaps = 4/181 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNP+ LKF+ +V LV F++ +EA+ SPLA+ +F P I +++ +FI+
Sbjct: 109 VYAESTPNPSVLKFVCNKV-LVPSLYEFTSIEEAKPSPLATALFQFPFIKNIFIEKNFIS 167
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
+ K D +WE + + + + G I+++ + + E+ + I
Sbjct: 168 ITKFDIIEWEDITLQLREFLKSYIEDGKTILNDDAPQKLNKTEEAIEQKFEALDDTSKNI 227
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANILNHF 179
+L+ ++PAV DGG+I FK Y V + ++GACSGCPS++ TLK G+ N+L
Sbjct: 228 VNILEEYIKPAVESDGGNIEFKSYDANTKKVEVLLQGACSGCPSSTFTLKNGIENMLKEM 287
Query: 180 V 180
+
Sbjct: 288 L 288
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 8 TPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK-D 66
T N LKF + + + F+N +A+ SPLA ++F +P + VY +FI + + +
Sbjct: 11 TSNETILKFEADRFLTNHNSFEFNNIDDAKHSPLAQQLFYLPFVKKVYIATNFIAIERYN 70
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPII 92
+W+ ++ V I E ++S D ++
Sbjct: 71 IVEWKDVQNEVAAQI-EDYLSNDGVV 95
>gi|260060626|ref|YP_003193706.1| nifU related protein [Robiginitalea biformata HTCC2501]
gi|88784756|gb|EAR15925.1| nifU related protein [Robiginitalea biformata HTCC2501]
Length = 300
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 102/182 (56%), Gaps = 6/182 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNPA +K++ + LV F + +A SPLA ++F P + V+ +++I+
Sbjct: 109 VYAEVTPNPAVMKYVANKQ-LVPDVFEFKDIDQARHSPLAQKLFGFPFVKEVFMDHNYIS 167
Query: 63 VGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDM-KLDDMGSGDFIESDSAVVQR 120
V K + +WE + + I E+ +G ++ G + ++ + G+ + D + Q
Sbjct: 168 VTKYEVAEWEDVSMELREFIREYLAAGGEVLEPGASAEKSQIAGVPEGNLEQMDP-ISQE 226
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
I +L+ V+PAVA DGG+IVF+ Y V + ++GACSGCPS++ TLK G+ +L +
Sbjct: 227 IAGILEEYVKPAVASDGGNIVFQSYEAESKTVHVILQGACSGCPSSTFTLKNGIQTMLQN 286
Query: 179 FV 180
+
Sbjct: 287 MM 288
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I ++T NPA LKF Q ++ +G+ + N EA+ SPLA ++F +P I +VY +F+
Sbjct: 6 ITLKETNNPAILKFEANQPLVTKGSYEYKNIDEAKDSPLAQQLFYLPFIKTVYISGNFVA 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPII 92
+ + D W+ ++ V ++E+ +G+P++
Sbjct: 66 MERFDIVTWDDVKQEVAQQLVEYLNAGEPVV 96
>gi|86140721|ref|ZP_01059280.1| NifU-like domain protein [Leeuwenhoekiella blandensis MED217]
gi|85832663|gb|EAQ51112.1| NifU-like domain protein [Leeuwenhoekiella blandensis MED217]
Length = 301
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 99/182 (54%), Gaps = 6/182 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNPA LKF+ + ++ E + F N EA+ +PLA +F P + V+ ++++
Sbjct: 110 VYAESTPNPAVLKFVTNKKIVTE-TLEFKNIDEAKNAPLALALFHFPFVKEVFMDSNYVS 168
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPII-HNGGLGDMKLDDMGSGDFIESDSAVVQR 120
V K D +W+ + V I + G II N +++ +F E+ +
Sbjct: 169 VQKYDVAEWDDVFQEVREFIKTYIEEGKEIISENFKKTPQAVEEQKEVEF-EAMDDTSKE 227
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
I +++ V+PAVA DGG+I+FK Y V + ++GACSGCPS++ TLK G+ N+L
Sbjct: 228 IANIIEEYVKPAVASDGGNILFKHYDPESKNVKVILQGACSGCPSSTFTLKNGIENMLKE 287
Query: 179 FV 180
+
Sbjct: 288 ML 289
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E T NPA KF ++ + F N EA+ SPLA ++F +P + +VY +FI
Sbjct: 6 ITIEPTSNPAIKKFQANSFLVDHNSYEFKNIDEAKNSPLAQQLFYLPFVKTVYISQNFIA 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPII 92
+ K + +W ++ + I E+F++ + ++
Sbjct: 66 IEKFNIVEWIDIQDELSAQI-ENFLNDNGVV 95
>gi|323336723|gb|EGA77987.1| Nfu1p [Saccharomyces cerevisiae Vin13]
Length = 174
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 85/142 (59%), Gaps = 12/142 (8%)
Query: 56 FGYDFITVGKDQY-DWEHLRPPVLGMIMEHFISGDPII--------HNGGLGDMKLDDMG 106
G DF+T+ KD+ W ++P ++ ++ + G+ +I G G K++ M
Sbjct: 2 IGDDFLTINKDRMVHWNSIKPEIIDLLTKQLAXGEDVISKEFHAVQEEEGEGGYKIN-MP 60
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSA 164
+ E D V + I+E++D R+RPA+ DGGDI ++G+ + G V+L ++GAC+ C S+
Sbjct: 61 KFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCSSS 120
Query: 165 SETLKYGVANILNHFVPEVKDI 186
TLKYG+ ++L H+V EVK++
Sbjct: 121 EVTLKYGIESMLKHYVDEVKEV 142
>gi|57335931|emb|CAH25367.1| nifU-like protein [Guillardia theta]
Length = 183
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 77/128 (60%), Gaps = 8/128 (6%)
Query: 64 GKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKE 123
GKDQ+ W ++P V I++ + SG II DM D + E DS +V IKE
Sbjct: 31 GKDQHSWAEMKPEVFDAILDFYASGQSIIT--AEEDMPQDTKVN----EDDSEIVAMIKE 84
Query: 124 VLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
+LD R+RPAV DGGDI F G+ + G V + ++GACS C S+ TLK GV N+L H+VP
Sbjct: 85 LLDTRIRPAVQDDGGDISFIGFDEETGRVTVRLQGACSTCSSSKVTLKSGVENMLMHYVP 144
Query: 182 EVKDIRTV 189
EV ++ V
Sbjct: 145 EVTEVVAV 152
>gi|298206804|ref|YP_003714983.1| NifU-like domain protein [Croceibacter atlanticus HTCC2559]
gi|83849436|gb|EAP87304.1| NifU-like domain protein [Croceibacter atlanticus HTCC2559]
Length = 305
Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 102/188 (54%), Gaps = 21/188 (11%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E TPNP+ LKF+ + ++V+ F + + +PLA +F+ P + ++ ++++
Sbjct: 109 IYAESTPNPSVLKFVANKKLVVQSE-EFKSIDDTANAPLAQALFNFPFVKEIFIDENYVS 167
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIH-----------NGGLGDMKLDDMGSGDF 110
+ K D +W + + I +H +SG P++ NGG + D+ D
Sbjct: 168 IQKYDMAEWGDITTELRDFISQHIMSGKPVVTEHRANKLAPQTNGGTTEKPQLDLSHLD- 226
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETL 168
++ A+V E+LD ++PAVA DGG+I+F Y + V + ++GACSGCPS++ TL
Sbjct: 227 -DTSKAIV----EILDEYIKPAVASDGGNIMFDSYDEETKSVKVILQGACSGCPSSTMTL 281
Query: 169 KYGVANIL 176
K G+ +L
Sbjct: 282 KNGIETML 289
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I + T NP+ LKF + + + F N EA+ SPLA ++F +P + +VY +FI
Sbjct: 5 IDIQSTSNPSILKFETNKFLSRHDSFEFHNIDEAKPSPLAQKLFYLPFVKTVYIAQNFIA 64
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPII 92
+ K D +W ++ V I+E+ SG+ +I
Sbjct: 65 IQKYDIAEWSDVQDEVKSQILEYLNSGEDVI 95
>gi|163753913|ref|ZP_02161036.1| thioredoxin-related protein [Kordia algicida OT-1]
gi|161326127|gb|EDP97453.1| thioredoxin-related protein [Kordia algicida OT-1]
Length = 301
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 93/181 (51%), Gaps = 4/181 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E TPNP +KF+ + + V+ F N E + +PLA +F P + ++ ++I+
Sbjct: 110 IYAESTPNPTVMKFVANKKI-VDRIFEFKNIDETKYAPLAQSLFHFPFVKEIFLDKNYIS 168
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
+ K D +W + + I + G +I + K S + E + + I
Sbjct: 169 ITKYDMVEWNDITMEIREFIRNYIQEGREVISKDIPVEQKEKIQISDESFEELDDISKEI 228
Query: 122 KEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+L+ ++PAVA DGG+I+F Y IV + ++GACSGCPS++ TLK G+ N L +
Sbjct: 229 VNILEEYIKPAVASDGGNIMFDSYDPNSKIVKVVLQGACSGCPSSTMTLKSGIENTLKNL 288
Query: 180 V 180
+
Sbjct: 289 L 289
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E T NPA +KF + + F N EA+ SPLA ++F +P + +++ +FI
Sbjct: 6 ISIEKTSNPAIIKFEASTFLSRHNSYEFKNIDEAKDSPLAQQLFYLPFVKTIFISGNFIA 65
Query: 63 VGKDQYD---WEHLRPPVLGMIMEHFISGDPIIHNGG 96
+ ++Y+ WE ++ V I + G +I
Sbjct: 66 I--ERYNIVTWEDVQDEVAEQIQNYINEGKEVISESA 100
>gi|294936237|ref|XP_002781672.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
gi|239892594|gb|EER13467.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
Length = 262
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 105/197 (53%), Gaps = 25/197 (12%)
Query: 3 IQTEDTPNPATLKFI--PGQVVLVEGAIHFSNAK-EAEISPLASRIFSIPGIASVYFGYD 59
+ E TPNP+ + F G+ +L +GA S K + SPLA+ +F I G+ V
Sbjct: 31 VSAEATPNPSAMIFTLEGGKPILGKGAKSMSFEKTQCGGSPLAASLFRIHGVDKVLLAAR 90
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHF-------ISGDPIIHNGGLGDMKLDDMGSGDFI 111
TV K + +WE L+P V +I + F ++ D I + D DD
Sbjct: 91 HATVTKSPETEWEMLKPNVELVISQFFDIPNVKPVAPDTIEYTQEGQDQHNDD------- 143
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLK 169
VV+ I E+L+ R++P V RDGGD+ F + G++ + + G+C+GCP +S TLK
Sbjct: 144 -----VVKSIHEILEQRIKPFVERDGGDVEFIAFDSDTGVLQIRLVGSCAGCPKSSVTLK 198
Query: 170 YGVANILNHFVPEVKDI 186
+G+ ++ H++PEVK++
Sbjct: 199 FGIQRMVCHYIPEVKNV 215
>gi|327289878|ref|XP_003229651.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like, partial [Anolis carolinensis]
Length = 129
Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 78/131 (59%), Gaps = 9/131 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F++ SPLA ++F I G+ SV+FG DF
Sbjct: 6 MFIQTQDTPNPNSLKFIPGKPVLESRTMEFTSPASTYCSPLARQLFRIEGVKSVFFGADF 65
Query: 61 ITVGKDQ--YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+TV K+ DW ++P + IM+ + SG P++ + + + S E D VV
Sbjct: 66 VTVTKESEDVDWNLIKPDIYATIMDFYASGLPVVTDEA---PRPETAPS----EEDDEVV 118
Query: 119 QRIKEVLDNRV 129
IKE+LD R+
Sbjct: 119 SMIKELLDTRI 129
>gi|225011341|ref|ZP_03701795.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-3C]
gi|225004524|gb|EEG42492.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-3C]
Length = 301
Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 101/183 (55%), Gaps = 8/183 (4%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E TPNP+ +K++ +++ V F N EA+ +PLA +F +P + V+ ++I+
Sbjct: 110 IYAESTPNPSVMKYVANKLI-VPALFEFKNIDEAKDAPLAKELFLMPFVKEVFMDQNYIS 168
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA--VVQ 119
V K D +WE + + I +SG + G K + + +D+ +
Sbjct: 169 VTKYDVAEWEEINNELREKIRLFLMSGQESV--GANTVQKEKEKAPTTLLHTDNLDDTSK 226
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILN 177
+I ++L+ V+PAVA DGG+I+F Y + V + ++GACSGCPS++ TLK G+ N+L
Sbjct: 227 QIVDILEEYVKPAVASDGGNIMFDSYDEVSKTVNVILQGACSGCPSSTFTLKNGIENMLK 286
Query: 178 HFV 180
+ +
Sbjct: 287 NMM 289
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 8 TPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQ 67
T NP +KF + + F N +A+ SPLA ++F +P + +VY +FI G ++
Sbjct: 12 TNNPNIMKFETNHFISPDKNYEFQNIDQAKESPLAQQLFHLPFVKTVYISSNFI--GIEK 69
Query: 68 YD---WEHLRPPVLGMIMEHFISGDPII 92
YD WE ++ + ++++ +G ++
Sbjct: 70 YDIVGWEDIKDSLGQQLVDYLNTGAAVV 97
>gi|319953626|ref|YP_004164893.1| nitrogen-fixing nifu domain-containing protein [Cellulophaga
algicola DSM 14237]
gi|319422286|gb|ADV49395.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga
algicola DSM 14237]
Length = 300
Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 100/193 (51%), Gaps = 28/193 (14%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNPA +KF+ + + V A F N EA+ S LA ++F P + V+F ++ +
Sbjct: 109 VYAESTPNPAVMKFVSNKTI-VPTAFEFKNIDEAKDSELAKKLFHFPFVKEVFFDENYAS 167
Query: 63 VGKDQY-DWEH----LRPPVLGMIME--HFISGDPIIHNGG------LGDMKLDDMGSGD 109
V K + DW +R + I + +S + ++ L D LDD
Sbjct: 168 VTKYEVADWNEVTFDIRELIRNFIADGLEVVSAESVVKKKAEAPKTQLQDANLDDTS--- 224
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASET 167
++I ++L+ V+PAVA DGG+I+FK Y V + ++GACSGCPS++ T
Sbjct: 225 ---------KKIIDILEEYVKPAVASDGGNIMFKSYDKETKTVNVILQGACSGCPSSTYT 275
Query: 168 LKYGVANILNHFV 180
LK G+ ++L + +
Sbjct: 276 LKNGIESMLKNMM 288
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 7 DTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK- 65
+T NPA LKF + + + EA+ SPLA ++F +P + +VY +FI + +
Sbjct: 10 ETNNPAILKFDTNHFITKSNNYEYKDIDEAKNSPLAQQLFYLPFVKTVYISANFIALERF 69
Query: 66 DQYDWEHLRPPVLGMIMEHFISGDPII 92
+W+ ++ V ++E+ SG+P+I
Sbjct: 70 SIVEWDDVKDEVAQQLVEYLNSGEPVI 96
>gi|126663121|ref|ZP_01734119.1| thioredoxin-related protein [Flavobacteria bacterium BAL38]
gi|126624779|gb|EAZ95469.1| thioredoxin-related protein [Flavobacteria bacterium BAL38]
Length = 299
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 96/174 (55%), Gaps = 4/174 (2%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TPNP+ LKF+ ++ L + A+ N E SPLA +F P + ++ ++I+V K
Sbjct: 111 ETTPNPSVLKFVCNKL-LTKTALECKNIDETIASPLAKELFKFPFVKEIFIDENYISVTK 169
Query: 66 -DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEV 124
+W+ + + I E+ +G+ +I + ++ + ++ Q+I +
Sbjct: 170 FAVTEWDEITLELRTFIKEYIENGNTVIDETAIVKTEIHQKQQEAYFDTLDVTSQQIINI 229
Query: 125 LDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANIL 176
++ V+PAV DGG+I+F+ + + V + ++GACSGCPS++ TLK G+ N+L
Sbjct: 230 IEEYVKPAVQSDGGNIMFESFDPIEKRVKVILQGACSGCPSSTFTLKNGIENML 283
Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I T+ T NPA +KF + ++ F N E + SPLA ++F +P + +VY +FI
Sbjct: 4 IATKITQNPAIVKFELDENIVRSENFEFKNIDETQNSPLAKQLFFLPFVKTVYVSGNFIA 63
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIH 93
+ K +WE ++ V I E +G II
Sbjct: 64 IEKFSIVEWEDVQEDVANQINEFISNGGEIIK 95
>gi|297266190|ref|XP_001096379.2| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Macaca mulatta]
Length = 196
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 36/186 (19%)
Query: 10 NPATLKFIP----GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
NP T+K P Q L F N +ISPL +I G+ SV+FG DFITV K
Sbjct: 28 NPYTIKKQPLHQFVQRPLFPLPAAFCNP--GKISPLLKQI---EGVKSVFFGPDFITVTK 82
Query: 66 DQ--YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKE 123
+ DW L+P + IM+ F SG P++ ++ SG+
Sbjct: 83 ENEDLDWNLLKPDIYATIMDFFASGLPLV---------TEETPSGE-------------- 119
Query: 124 VLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEV 183
+ P V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L ++PEV
Sbjct: 120 --AGNMLPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPEV 177
Query: 184 KDIRTV 189
+ + V
Sbjct: 178 EGVEQV 183
>gi|323304101|gb|EGA57879.1| Nfu1p [Saccharomyces cerevisiae FostersB]
Length = 174
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 84/142 (59%), Gaps = 12/142 (8%)
Query: 56 FGYDFITVGKDQY-DWEHLRPPVLGMIMEHFISGDPII--------HNGGLGDMKLDDMG 106
G DF+T+ KD+ W ++P ++ ++ + + +I G G K++ M
Sbjct: 2 IGDDFLTINKDRMVHWNSIKPEIIDLLTKQLAYXEDVISKEFHAVQEEEGEGGYKIN-MP 60
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSA 164
+ E D V + I+E++D R+RPA+ DGGDI ++G+ + G V+L ++GAC+ C S+
Sbjct: 61 KFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCSSS 120
Query: 165 SETLKYGVANILNHFVPEVKDI 186
TLKYG+ ++L H+V EVK++
Sbjct: 121 EVTLKYGIESMLKHYVDEVKEV 142
>gi|149369678|ref|ZP_01889530.1| thioredoxin-related protein [unidentified eubacterium SCB49]
gi|149357105|gb|EDM45660.1| thioredoxin-related protein [unidentified eubacterium SCB49]
Length = 306
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 10/180 (5%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TPNPA LKF+ + LV G F N +A+ +PLA+ +F+ P + V+ ++I+V K
Sbjct: 112 ETTPNPAVLKFVANKP-LVTGTFDFKNIDDAKHAPLATALFNFPFVKEVFMSNNYISVMK 170
Query: 66 -DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD-MKLDDMGSGDFIE-----SDSAVV 118
D +W+ + + I + G I + L + +K + E S S +
Sbjct: 171 YDIAEWDEISMQLREFIRSYIEDGKEIFTDAMLNETIKEEQKAVASPTENGSDKSYSDID 230
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANIL 176
I ++LD ++PAVA DGG I F Y V + ++GACSGCPSA+ TLK G+ +L
Sbjct: 231 NEIMDILDEYIKPAVASDGGHIAFDSYDANTKTVKVILQGACSGCPSATVTLKNGIETML 290
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 8 TPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK-D 66
T N +KF+ + + F N +EA SP+A ++F +P + +VY +FI + K +
Sbjct: 11 TNNENIVKFVANSFLTQAKSYEFKNIEEAVESPIAQQLFYLPFVKTVYISQNFIAIEKYN 70
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGG 96
W+ ++ V I E+ SG P+++
Sbjct: 71 IVSWDMVQDEVAESINEYIESGKPVVNESA 100
>gi|332519966|ref|ZP_08396430.1| nitrogen-fixing NifU domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332044525|gb|EGI80719.1| nitrogen-fixing NifU domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 300
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 4/181 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNP+ +KF+ + + A F +A+ SPLA+ +F +P + SV+ ++++
Sbjct: 109 VYAESTPNPSVIKFVANKKI-ANAAYEFVTIDDAKPSPLATELFHLPFVKSVFIDENYVS 167
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K D +W+ + + I + G II ++ E+ + I
Sbjct: 168 VTKYDVAEWQEITNELREFIRSYIEDGKEIISANAPEAIEKSTKNVDAHFETLDDTSKEI 227
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+L+ V+PAVA DGG+I F+ Y V + ++GACSGCPS++ TLK G+ N+L
Sbjct: 228 VNILEEYVKPAVASDGGNIQFESYNADTKTVKVILQGACSGCPSSTFTLKNGIENMLKEM 287
Query: 180 V 180
+
Sbjct: 288 L 288
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ ++T N + +KF Q + + F+N EA+ SPLA +F +P + VY +FI
Sbjct: 6 VTIQETSNNSIIKFELNQFITQHQSFEFNNIDEAKESPLAQELFYLPFVKKVYITSNFIA 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLG 98
+ + + +W+ ++ V I + G +I
Sbjct: 66 IERFNIVEWKDVQDEVSEQIKAYLNKGGIVITENATS 102
>gi|326334857|ref|ZP_08201058.1| nitrogen-fixing NifU domain protein [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325692894|gb|EGD34832.1| nitrogen-fixing NifU domain protein [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 295
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 98/185 (52%), Gaps = 21/185 (11%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E TPNP +KF+ + LV + +A+EA SPLA+ +F P + V+F ++I+
Sbjct: 110 IYVESTPNPMAMKFVANKK-LVSRVYEYKSAQEAAESPLAAALFKFPYVKEVFFDSNYIS 168
Query: 63 VGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH------NGGLGDMKLDDMGSGDFIESDS 115
V + + WE + + I ++ ++G P++ + G L+D+ S
Sbjct: 169 VIRQPKILWEEVMMELREFIRQYLMAGKPVVRVIVEDGDRPKGLPTLNDIYS-------- 220
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVA 173
++I +LD ++PAV+ DGG+I F Y +V + M+GAC+GCPS+ TLK G+
Sbjct: 221 ---RKIIAILDQYIKPAVSSDGGNIQFVSYDKESQVVKVLMQGACNGCPSSKLTLKQGIE 277
Query: 174 NILNH 178
IL
Sbjct: 278 AILRE 282
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M + + T NPA +K + V+LV+G+ F+ ++AE SPLA + +IP I +V+ +F
Sbjct: 1 MRLDIQRTTNPAIIK-LEAPVILVKGSYQFTTEEQAENSPLAKELLAIPFIKTVFISANF 59
Query: 61 ITV-GKDQYDWEHLRPPVLGMIMEHFISGDPII 92
I + +W+ + V + + G PI+
Sbjct: 60 IALEALPIVEWDDVAQEVALQVEAYLRRGAPIL 92
>gi|8571395|gb|AAF76865.1|AF232919_4 NifU-like protein [Sinorhizobium meliloti]
Length = 63
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 55/63 (87%)
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
RVRPAVA+DGGDI F+G++DG VFL+M+GACSGCPS++ TL++GV N+L HFVPEV+ +
Sbjct: 1 TRVRPAVAQDGGDITFRGFKDGTVFLNMKGACSGCPSSTATLRHGVQNLLRHFVPEVEAV 60
Query: 187 RTV 189
+V
Sbjct: 61 ESV 63
>gi|17946069|gb|AAL49077.1| RE53788p [Drosophila melanogaster]
Length = 134
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 65/108 (60%), Gaps = 7/108 (6%)
Query: 82 MEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIV 141
M+ F SG P++++ + +E D V IKE+LD R+RP V DGGDIV
Sbjct: 1 MDFFASGLPVLNDAQPN-------ADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIV 53
Query: 142 FKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
F GY G+V L M+G+CS CPS+ TLK GV N+L ++PEV+ + V
Sbjct: 54 FMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQV 101
>gi|300776224|ref|ZP_07086083.1| nitrogen-fixing NifU [Chryseobacterium gleum ATCC 35910]
gi|300505357|gb|EFK36496.1| nitrogen-fixing NifU [Chryseobacterium gleum ATCC 35910]
Length = 292
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 99/191 (51%), Gaps = 20/191 (10%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIAS-VYFGYDFI 61
I E TPNP +KF+ ++ L+EG + + AE PLA IF A+ V+ +F+
Sbjct: 103 IYAEMTPNPNVMKFVSSKL-LMEGFVEVKSKDAAEEVPLAQAIFKEFDFATEVFISDNFV 161
Query: 62 TVGKDQ-YDWEHLRPPVLGMIMEHFISG------DPIIHNGGLGDMKLDDMGSGDFIESD 114
V +D +W + V +I E+ +G +P H + + + + D+ E +
Sbjct: 162 AVTRDNSVEWHQVMMTVRALIAEYLQNGGEISKIEPQKHENPV-----EKIINRDYTEDE 216
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGV 172
Q+I ++L+ V PAV DGG I Y + + ++GACSGCPS++ TLK G+
Sbjct: 217 ----QKISDILNEYVAPAVENDGGKISLMEYDQENKTAKMLLQGACSGCPSSTATLKNGI 272
Query: 173 ANILNHFVPEV 183
NIL FVP++
Sbjct: 273 ENILKQFVPDL 283
>gi|213962175|ref|ZP_03390439.1| nitrogen-fixing NifU domain protein [Capnocytophaga sputigena
Capno]
gi|213955181|gb|EEB66499.1| nitrogen-fixing NifU domain protein [Capnocytophaga sputigena
Capno]
Length = 300
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 100/179 (55%), Gaps = 5/179 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFS-IPGIASVYFGYDFI 61
+ TE TPNP +KF+ + LV I + + +EA +P+A+ + + P I V+F ++I
Sbjct: 109 VYTETTPNPTVMKFVANKR-LVPTVIEYKSIEEATEAPMAATLLTRFPFIEEVFFDDNYI 167
Query: 62 TVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
++ K +WE + + I ++ G PII+ + + + + + + Q+
Sbjct: 168 SLTKKGMEEWEMIAADLRDYIRKYLSEGRPIINPSEIKRRQEEAQARLLSMVTTDEISQQ 227
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGY-RDGI-VFLSMRGACSGCPSASETLKYGVANILN 177
I +++ V+PAVA DGG+I F Y RD V + ++GACSGCPS+++TLK G+ IL
Sbjct: 228 IVAIIEQYVKPAVASDGGNIQFISYNRDTHHVEVLLQGACSGCPSSTQTLKKGIEVILK 286
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+ ++ + T NP +K + LV+G+ F N EA+ +PLA +F +P + +VY +F
Sbjct: 4 LTLKIQPTANPDIIK-LEANRPLVKGSYEFKNIDEAKNAPLAKELFYLPFVKTVYISSNF 62
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPII 92
I + + +W+ ++ V ++ + SG I+
Sbjct: 63 IALKRFPIVEWKEVQEEVAQQVLVYLQSGKDIL 95
>gi|315223924|ref|ZP_07865769.1| nitrogen-fixing NifU domain protein [Capnocytophaga ochracea F0287]
gi|314946096|gb|EFS98100.1| nitrogen-fixing NifU domain protein [Capnocytophaga ochracea F0287]
Length = 299
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 96/178 (53%), Gaps = 5/178 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFS-IPGIASVYFGYDFI 61
+ TE TPNP+ +KF+ + LV I + + KE + +P+A +F+ P I V+F ++I
Sbjct: 107 VYTETTPNPSVMKFVANKR-LVPTIIEYKHIKETDEAPMAKALFTQFPFIEEVFFDDNYI 165
Query: 62 TV-GKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+V KD +W + P + I + G +I + + + + + V ++
Sbjct: 166 SVTKKDNKEWAMVTPNIREFIKNYLSEGHTLISSSEIKRHQQATQERLLSMVTTDEVSKQ 225
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLS--MRGACSGCPSASETLKYGVANIL 176
I ++D V+PAVA DGG+I F Y ++ ++GACSGCPS++ TLK G+ IL
Sbjct: 226 IVAIIDEFVKPAVASDGGNIQFISYNPETHYVEVILQGACSGCPSSTLTLKKGIEVIL 283
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ + T +P +K + LV+G+ + N EA+ SPLA +F +P + +VY +FI
Sbjct: 6 LSVQPTSSPDIIK-LEANKALVKGSYEYKNIDEAKNSPLAKELFYLPFVKTVYISSNFIA 64
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGG 96
+ + +W+ ++ V ++ + SG I+ G
Sbjct: 65 LKRFPIIEWKDVQEEVAQQVLLYLQSGREIVSTEG 99
>gi|325955388|ref|YP_004239048.1| nitrogen-fixing NifU domain-containing protein [Weeksella virosa
DSM 16922]
gi|323438006|gb|ADX68470.1| nitrogen-fixing NifU domain-containing protein [Weeksella virosa
DSM 16922]
Length = 295
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 98/182 (53%), Gaps = 5/182 (2%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFS-IPGIASVYFGYDFITVG 64
E TPNPA +KF+ ++ LV I + ++A+ P+A+ IF P I V+ ++I++
Sbjct: 106 EMTPNPAVMKFVSNKL-LVPSIIEIKSREKAQNVPIATAIFQEYPFIEEVFIAENYISLT 164
Query: 65 K-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKE 123
K D W+ V ++ + + I ++ ++ + IE + V Q+IK
Sbjct: 165 KNDTESWDLWTMDVRSFVLSYLQTDGKIFNDDYEFVTEIPHEVAIKSIEEMTDVEQQIKA 224
Query: 124 VLDNRVRPAVARDGGDIVFKGYRDGIVFLSM--RGACSGCPSASETLKYGVANILNHFVP 181
+LD V+PAVA DGG+I + + M +GACSGCPS++ TLK+G+ +L +P
Sbjct: 225 ILDEYVQPAVANDGGNIELIEFDEQTKTAKMLLQGACSGCPSSTATLKHGIEGLLKQMLP 284
Query: 182 EV 183
EV
Sbjct: 285 EV 286
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 3 IQTEDTPNPATLKFI-PGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
I TE+TPNP LKF+ P Q L G + + AE SPLA + + P I V+ +F+
Sbjct: 4 IYTENTPNPNILKFVCPTQ--LTAGGVEYKKDDSAENSPLAQVLLTFPFIDKVFITANFV 61
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNG 95
+ K D WE + ++ +I EH+ D II+
Sbjct: 62 ALEKIDTIKWEDVSDDLIEIIQEHY-DDDAIIYES 95
>gi|325115956|emb|CBZ51510.1| Nitrogen-fixing NifU, C-terminal, related [Neospora caninum
Liverpool]
Length = 191
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 9/176 (5%)
Query: 23 LVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQ-YDWEHLRPPVLGMI 81
L G I + + SPLA +F I G +SV D++TV K + DW L PV I
Sbjct: 4 LKRGMIDVLSVRAEGASPLADCLFKIDGTSSVLIAGDYVTVVKAKDTDWGDLEEPVKRSI 63
Query: 82 MEHFISGDPIIH------NGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVAR 135
++H +SG P I + + + + + + + + I+E+L R RP +
Sbjct: 64 LDHLMSGLPAIQPVASSEEISVPEGRRQEPQQQSKPDEEEDLSEAIRELLHMRARPMLQA 123
Query: 136 DGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
DGGD+ + + GIV++ ++G+C GCPS+ T+K G+ +L +++PEV+D+R
Sbjct: 124 DGGDLEMMRFDEETGIVWVHLKGSCEGCPSSLITVKRGMKQMLQYYIPEVEDVRQC 179
>gi|295132490|ref|YP_003583166.1| nifU related protein [Zunongwangia profunda SM-A87]
gi|294980505|gb|ADF50970.1| nifU related protein [Zunongwangia profunda SM-A87]
Length = 309
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 13/186 (6%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNP +KF+ + +++ A F N +A SPLA ++F P + V+ ++++
Sbjct: 109 VYAESTPNPKVMKFVANRKLVLHAA-EFKNIDDAAESPLAQKLFHFPFVKEVFIDENYVS 167
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF---------IE 112
+ K D W+ + + I G+ +++N + GS I+
Sbjct: 168 INKYDVASWDEITMELREFIRNFIQEGNSVLNNDAITGAPEGKNGSETSKTAPKPQINID 227
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG--IVFLSMRGACSGCPSASETLKY 170
Q++ +L+ ++PAVA DGG+I+F Y + V + ++GACSGCPS++ TLK
Sbjct: 228 ELDDTSQQVVAILEEYIKPAVASDGGNILFDSYNEESRTVKVILQGACSGCPSSTMTLKS 287
Query: 171 GVANIL 176
G+ +L
Sbjct: 288 GIETML 293
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I + T P +KF + + F N EA SP+A ++F +P + +VY +FI
Sbjct: 6 INIQHTTQPEIVKFEANKFLTKHENFEFKNIDEAAKSPIAQQLFYLPFVKTVYISQNFIA 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPII 92
+ K D W + V I + G +I
Sbjct: 66 IEKYDIVAWPEVENEVAEQIQNYLNKGGIVI 96
>gi|89889561|ref|ZP_01201072.1| thioredoxin containing NifU domain [Flavobacteria bacterium BBFL7]
gi|89517834|gb|EAS20490.1| thioredoxin containing NifU domain [Flavobacteria bacterium BBFL7]
Length = 214
Score = 94.0 bits (232), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 101/185 (54%), Gaps = 8/185 (4%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNP+ +KF+ + ++V + F + + + LA ++++ P + +Y ++++
Sbjct: 21 VYAEATPNPSVMKFVANKKLVV-NSTEFKSIADTADNTLARQLYNFPFVKEIYADENYVS 79
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPI---IHNGGLGDMKLDDMGSGDFIESDSAVV 118
+ K D W+ + + I E +G I H G + +++ F E+ V
Sbjct: 80 IQKHDIASWDEVTFEIRSFIKEAIENGAEIGSSKHEAGTVKKEGENIELPKF-ENLDDVS 138
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANIL 176
+++ E+LD ++PAVA DGG+IVF Y + V + ++GACSGCPS++ TLK G+ +L
Sbjct: 139 KKVVEILDEYIKPAVASDGGNIVFDSYDENTKEVKVILQGACSGCPSSTMTLKSGIETML 198
Query: 177 NHFVP 181
+P
Sbjct: 199 RDMLP 203
>gi|50593019|ref|NP_001002757.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 3
[Homo sapiens]
gi|50593023|ref|NP_001002756.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 3
[Homo sapiens]
gi|114577881|ref|XP_001137265.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 3 [Pan troglodytes]
gi|114577883|ref|XP_001137343.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 4 [Pan troglodytes]
gi|114577885|ref|XP_001137421.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 5 [Pan troglodytes]
gi|332226736|ref|XP_003262548.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like isoform 4 [Nomascus leucogenys]
gi|332226738|ref|XP_003262549.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like isoform 5 [Nomascus leucogenys]
gi|332226740|ref|XP_003262550.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like isoform 6 [Nomascus leucogenys]
Length = 113
Score = 94.0 bits (232), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 68/108 (62%), Gaps = 8/108 (7%)
Query: 82 MEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIV 141
M+ F SG P++ + + GS E D VV IKE+LD R+RP V DGGD++
Sbjct: 1 MDFFASGLPLVTE----ETPSGEAGS----EEDDEVVAMIKELLDTRIRPTVQEDGGDVI 52
Query: 142 FKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L ++PEV+ + V
Sbjct: 53 YKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPEVEGVEQV 100
>gi|42521822|ref|NP_967202.1| putative nitrogen-fixing protein NifU [Bdellovibrio bacteriovorus
HD100]
gi|39574352|emb|CAE77856.1| putative nitrogen-fixing protein NifU [Bdellovibrio bacteriovorus
HD100]
Length = 186
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 11/188 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+ I+ + TPNP KF+ + VL +G +++AKEAE S LAS +F + G+ V+F +
Sbjct: 6 VLIRIQATPNPNAWKFVLDRAVLNDGKATYADAKEAEQSILASSLFQVEGVRQVHFFQNV 65
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
IT+ + D E ++ V +I + HN + M + VQ
Sbjct: 66 ITITHNFDADPEEIQRNVCSVIQTRMPA-----HNPAVTQMDEKKLRRASL----PPEVQ 116
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL-NH 178
+I+E+LD VRP + DGGD+ Y D +++ +GAC CPSA+ + IL +
Sbjct: 117 QIEEILDQTVRPGLQGDGGDLDVVKYEDNKLYVFYQGACGTCPSATSGTLMAIEGILRDQ 176
Query: 179 FVPEVKDI 186
F P ++ I
Sbjct: 177 FNPTIEVI 184
>gi|149912092|ref|ZP_01900681.1| hypothetical protein PE36_11562 [Moritella sp. PE36]
gi|149804829|gb|EDM64868.1| hypothetical protein PE36_11562 [Moritella sp. PE36]
Length = 215
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 5/178 (2%)
Query: 10 NPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKD-QY 68
+P T KFI + + G F+N + A SPL ++F++PG+A+V +T+ K+
Sbjct: 21 DPDTCKFIVSRTLHPGGPFFFANKERAAGSPLGEQLFALPGVANVLIAESIVTICKEPTA 80
Query: 69 DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNR 128
W L+ + I ++G P I L D +G SD+ ++ I+ +LD
Sbjct: 81 SWSGLKAAIGTAIRAQLLTGVPAI----LEMYIHTDTQTGMQRRSDAELITVIQGLLDKE 136
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+ ++A GG I R G +++SM G C GC SA TL+ G +L PE+++I
Sbjct: 137 INRSIANHGGKISIVEIRQGKLYISMSGGCQGCASAQVTLRQGFEVMLKRVAPEIEEI 194
>gi|150026140|ref|YP_001296966.1| hypothetical protein FP2102 [Flavobacterium psychrophilum JIP02/86]
gi|149772681|emb|CAL44164.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
Length = 298
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNPA +KF+ + L + + N + SPLA +F P + ++ ++++
Sbjct: 107 VYAESTPNPAVMKFVASKK-LTKTIVECKNIDQTHASPLAKELFKFPFVKEIFIDENYLS 165
Query: 63 VGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
+ K +W+ + + I E +G ++ + K ++ ++ Q+I
Sbjct: 166 ITKYAVAEWQEITLELRTFIKEFIENGKIVVDETKIVATKHEEKQEITNFDNLDVTSQKI 225
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANILNHF 179
+++ +RPAVA DGG+I+F Y V + ++GACSGCPS++ TLK G+ ++L
Sbjct: 226 INIIEEYIRPAVAADGGNILFDSYCQDTKQVKVILQGACSGCPSSTFTLKNGIESMLKDM 285
Query: 180 V--PEVK 184
+ PE++
Sbjct: 286 LNQPELR 292
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
I +DT NP LKF + + + N EA SPLA ++F +P + +VY +FI
Sbjct: 3 LITIKDTNNPNILKFEFSYFITPNQSYEYKNIDEAGASPLAQQLFYLPFVKTVYISGNFI 62
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGG 96
+ K + WE ++ V ME F+S NGG
Sbjct: 63 AIEKYNIVQWEDVKHDVADQ-MEAFVS------NGG 91
>gi|322827929|gb|EFZ31905.1| hypothetical protein TCSYLVIO_1772 [Trypanosoma cruzi]
Length = 261
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 97/198 (48%), Gaps = 17/198 (8%)
Query: 1 MFIQTEDTPNPATLKF-IPGQVVLVEGAIHFSNAKE------AEISPLASRIFSIPG--I 51
M + TPNP L F IP +G I E A + PL++ IF G +
Sbjct: 11 MQLHAAPTPNPLCLAFHIPSSTY--DGFIPNGQTCEVAHRGLAWVHPLSNGIFEQYGQEV 68
Query: 52 ASVYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF 110
ASV+ +++ DW L + I + + + + + DD+
Sbjct: 69 ASVFIAPRHVSITVYPNVDWSTLEWSISSFIGHYLLFVNECVPAAKEYTLMEDDLR---I 125
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETL 168
E DS V+Q IKE+L +VRP V RDGGD+ + D G+V L+M GAC CPS+S TL
Sbjct: 126 HEEDSEVLQCIKELLREQVRPMVQRDGGDVKLLNFNDETGVVSLAMLGACRTCPSSSNTL 185
Query: 169 KYGVANILNHFVPEVKDI 186
K G+ ++ HF+PEV ++
Sbjct: 186 KDGIERVMKHFLPEVTEV 203
>gi|313206892|ref|YP_004046069.1| nitrogen-fixing nifu domain protein [Riemerella anatipestifer DSM
15868]
gi|312446208|gb|ADQ82563.1| nitrogen-fixing NifU domain protein [Riemerella anatipestifer DSM
15868]
Length = 292
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 97/186 (52%), Gaps = 10/186 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIAS-VYFGYDFI 61
I E TPNP+ +KF+ +++L EG + + +EA PLA IF A V+ +F+
Sbjct: 103 IYAEMTPNPSVMKFVASRLLL-EGFVEVKSREEAAEVPLAQAIFKEFDFAQEVFISDNFV 161
Query: 62 TVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNG-GLGDMKLDDMGSGDFIESDSAVVQ 119
V KD W + I E+ +G + H + ++ + + ++ +++ Q
Sbjct: 162 AVTKDDSVQWHEVMVVTRAFIAEYLQNGGEVSHKEPQKHENPVEKIINREYTDTE----Q 217
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSM--RGACSGCPSASETLKYGVANILN 177
+I ++L+ V PAV DGG I Y + M +GACSGCPS++ TLK G+ N+L
Sbjct: 218 KISDILNEYVAPAVENDGGKISLMEYDESTKTAKMLLQGACSGCPSSTATLKGGIENVLK 277
Query: 178 HFVPEV 183
F+P++
Sbjct: 278 QFLPDL 283
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E T NP +KF+ L+ G++ + PLA +F+ P + ++ +FI V K
Sbjct: 7 EATENPRVMKFV-ADYNLIPGSLELDRNSDISEIPLAQELFNYPFVDKIFITANFIAVAK 65
Query: 66 -DQYDWEHLRPPVLGMIMEHFISG 88
D +WEH+ + +I + ++
Sbjct: 66 QDTVEWEHVVQSLKNVIEDELLAN 89
>gi|255534458|ref|YP_003094829.1| nifU related protein [Flavobacteriaceae bacterium 3519-10]
gi|255340654|gb|ACU06767.1| nifU related protein [Flavobacteriaceae bacterium 3519-10]
Length = 292
Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 95/190 (50%), Gaps = 16/190 (8%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIAS-VYFGYDF 60
I +E TPNP +KF+ L++G + + EA PLA IF G A ++ +F
Sbjct: 102 LIYSEMTPNPMVMKFV-SSTELLDGFVEVKSPAEAGEVPLAKAIFDEFGFAKEIFISGNF 160
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGG----LGDMKLDDMGSGDFIESDS 115
+ V K+ +W + + M FI+ + NGG + K + +
Sbjct: 161 VAVTKNVSVEWHEVM-----ITMRDFIAN--YLQNGGAISNIATQKHETPVESSIQRDYT 213
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG--IVFLSMRGACSGCPSASETLKYGVA 173
A Q+I ++LD V PAVA DGG I Y + + ++GACSGCPS++ TLK G+
Sbjct: 214 ANEQKISDILDEYVAPAVAGDGGKISLIEYDEASKTAKMLLQGACSGCPSSTATLKGGIE 273
Query: 174 NILNHFVPEV 183
NIL FVPE+
Sbjct: 274 NILKQFVPEL 283
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E T NP LKF+ L+ G++ + PLA ++ + P + ++ +FI
Sbjct: 4 ILIEATENPKVLKFV-ADYNLLPGSLELDRQSDISEIPLAQKLLNFPFVDRIFITANFIA 62
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISG 88
V K D +WE + + +I + I+
Sbjct: 63 VAKQDTVEWEFVADSLKNVIEDELIAN 89
>gi|71666135|ref|XP_820030.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70885357|gb|EAN98179.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 261
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 97/198 (48%), Gaps = 17/198 (8%)
Query: 1 MFIQTEDTPNPATLKF-IPGQVVLVEGAIHFSNAKE------AEISPLASRIFSIPG--I 51
M + TPNP L F IP +G I E A + PL++ IF G +
Sbjct: 11 MQLHAAPTPNPLCLAFHIPSSTY--DGFIPNGQTCEVAHRGLAWVHPLSNGIFEQYGQEV 68
Query: 52 ASVYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF 110
ASV+ +++ DW L + I + + + + + DD+
Sbjct: 69 ASVFIAPRHVSITVYPNVDWSTLEWSISSFIGHYLLFVNECVPAAKEYTLMEDDL---RI 125
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETL 168
E DS V+Q IKE+L +VRP V RDGGD+ + + G+V L+M GAC CPS+S TL
Sbjct: 126 HEEDSEVLQCIKELLREQVRPMVQRDGGDVKLLNFNEETGVVSLAMLGACRTCPSSSNTL 185
Query: 169 KYGVANILNHFVPEVKDI 186
K G+ ++ HF+PEV ++
Sbjct: 186 KDGIERVMKHFLPEVTEV 203
>gi|294877892|ref|XP_002768179.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
gi|239870376|gb|EER00897.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
Length = 177
Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 86/154 (55%), Gaps = 8/154 (5%)
Query: 39 SPLASRIFSIPGIASVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGL 97
SPLA+ +F I G+ V TV K + DWE L+P V ++M F I + +
Sbjct: 11 SPLAASLFRIHGVDKVLLAARHATVTKSPETDWEMLQPNV-ELVMSQFFE---IPNVKPV 66
Query: 98 GDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMR 155
++ G +D VV+ I E+L+ R++P V RDGGD+ F + G + + +
Sbjct: 67 SPEAIEYTPEGQDQHNDE-VVKSIHEILEQRIKPFVERDGGDVEFVSFDADSGELEIRLV 125
Query: 156 GACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
G+CSGCP +S TLK+G+ ++ H++PEVK++ +
Sbjct: 126 GSCSGCPKSSVTLKFGIQRMVCHYIPEVKNVTNI 159
>gi|256820781|ref|YP_003142060.1| nitrogen-fixing NifU domain-containing protein [Capnocytophaga
ochracea DSM 7271]
gi|256582364|gb|ACU93499.1| nitrogen-fixing NifU domain protein [Capnocytophaga ochracea DSM
7271]
Length = 299
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 95/178 (53%), Gaps = 5/178 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFS-IPGIASVYFGYDFI 61
+ TE TPNP+ +KF+ + LV I + + +E + +P+A +F+ P I V+F ++I
Sbjct: 107 VYTETTPNPSVMKFVANKR-LVPTIIEYKHIEETDEAPMAKALFTQFPFIEEVFFDDNYI 165
Query: 62 TV-GKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+V KD +W + + I + G +I + + + + + V ++
Sbjct: 166 SVTKKDNKEWAMVTSNIREFIKNYLSEGHILISSSEIKRHQQATQERLLSMVTTDEVSKQ 225
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLS--MRGACSGCPSASETLKYGVANIL 176
I ++D V+PAVA DGG+I F Y ++ ++GACSGCPS++ TLK G+ IL
Sbjct: 226 IIAIIDEFVKPAVASDGGNIQFISYNPETHYVEVILQGACSGCPSSTLTLKKGIEVIL 283
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ + T +P +K + LV+G+ + N EA+ SPLA +F +P + +VY +FI
Sbjct: 6 LSVQPTSSPDIIK-LEANKALVKGSYEYKNIDEAKNSPLAKELFYLPFVKTVYISSNFIA 64
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGG 96
+ + +W+ ++ V ++ + SG I+ G
Sbjct: 65 LKRFPIIEWKDVQEEVAQQVLLYLQSGREIVSTEG 99
>gi|8118105|gb|AAF72894.1|AF228511_2 NU1 [Trypanosoma cruzi]
Length = 261
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 97/198 (48%), Gaps = 17/198 (8%)
Query: 1 MFIQTEDTPNPATLKF-IPGQVVLVEGAIHFSNAKE------AEISPLASRIFSIPG--I 51
M + TPNP L F IP +G I E A + PL++ IF G +
Sbjct: 11 MQLHAAPTPNPLCLAFHIPSSTY--DGFIPNGQTCEVAHRGLAWVHPLSNGIFEQYGQEV 68
Query: 52 ASVYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF 110
ASV+ +++ +W L + I + + + + + DD+
Sbjct: 69 ASVFIAPRHVSITVYPNVEWSKLEWSISSFIGHYLLFVNECVPAAKEYTLMEDDL---RI 125
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETL 168
E DS V+Q IKE+L +VRP V RDGGD+ + + G+V L+M GAC CPS+S TL
Sbjct: 126 HEEDSEVLQCIKELLREQVRPMVQRDGGDVKLLNFNEETGVVSLAMLGACRTCPSSSNTL 185
Query: 169 KYGVANILNHFVPEVKDI 186
K G+ ++ HF+PEV ++
Sbjct: 186 KDGIERVMKHFLPEVTEV 203
>gi|21430120|gb|AAM50738.1| GM32035p [Drosophila melanogaster]
Length = 104
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 50/69 (72%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+LD R+RP V DGGDIVF GY G+V L M+G+CS CPS+ TLK GV N+L ++
Sbjct: 3 IKELLDTRIRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 62
Query: 181 PEVKDIRTV 189
PEV+ + V
Sbjct: 63 PEVESVEQV 71
>gi|146103241|ref|XP_001469515.1| hypothetical protein [Leishmania infantum]
gi|134073885|emb|CAM72624.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 299
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 13/196 (6%)
Query: 1 MFIQTEDTPNPATLKF-IPG---QVVLVEG-AIHFSNAKEAEISPLASRIFSI--PGIAS 53
M + + TPNP F IP + + +G + ++ A + PL+ +F + S
Sbjct: 50 MQLHAQRTPNPLCHSFTIPADSFESFVPQGQSCEVAHRGLAWVHPLSQGLFEQYPQELMS 109
Query: 54 VYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE 112
V+ +++ DW + + + + I + I + DD+ D
Sbjct: 110 VFIAPRHVSISVYTNVDWSKIEWSISSFLGHYLIFTNACISPAKEYTLIEDDLELKD--- 166
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKY 170
SDS V+Q IKE+L +VRP V RDGGD+ + + GIV L+M GAC CPS+ TLK
Sbjct: 167 SDSEVLQCIKELLREQVRPMVQRDGGDVKLLNFNEKTGIVSLAMLGACKTCPSSQNTLKD 226
Query: 171 GVANILNHFVPEVKDI 186
G+ ++ HF+PEV ++
Sbjct: 227 GIERVMKHFLPEVTEV 242
>gi|149196448|ref|ZP_01873503.1| putative nitrogen-fixing protein NifU [Lentisphaera araneosa
HTCC2155]
gi|149140709|gb|EDM29107.1| putative nitrogen-fixing protein NifU [Lentisphaera araneosa
HTCC2155]
Length = 189
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVG 64
T+ TPNP +KFI V+ +G + +SNA++ + LA+ +FSI I V+F + ITV
Sbjct: 7 TQPTPNPNAVKFILNLDVITKGRVSYSNAEDCHNNELAATLFSIACITQVHFFENVITVT 66
Query: 65 K--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIK 122
+ D Y WE L V+ ++ + DP G + + + S V++I+
Sbjct: 67 QNGDMY-WEELEDAVIALLQDGIDKHDPEFQVGEDEEERRAKL---------SPEVRQIE 116
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDG--IVFLSMRGACSGCPSASETLKYGVANILN-HF 179
++LD VRP++ DGGD++ GY G I+ + GAC+ C S++ + + L F
Sbjct: 117 DILDRTVRPSLQGDGGDLMVMGYDLGSKILKVMYEGACNSCASSTTGTLMAIKSTLQAEF 176
Query: 180 VPEVK 184
P+++
Sbjct: 177 DPDIE 181
>gi|315023968|gb|EFT36970.1| nifU related protein [Riemerella anatipestifer RA-YM]
gi|325335671|gb|ADZ11945.1| Thioredoxin-like protein [Riemerella anatipestifer RA-GD]
Length = 292
Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 24/193 (12%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIAS-VYFGYDFI 61
I E TPNP+ +KF+ +++L +G + + +EA PLA IF A V+ +F+
Sbjct: 103 IYAEMTPNPSVMKFVASRLLL-DGFVEVKSREEAAEVPLAQAIFKEFSFAQEVFISDNFV 161
Query: 62 TVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMK--------LDDMGSGDFIE 112
V KD W + I E+ + NGG K ++ + + ++
Sbjct: 162 AVTKDDSVQWHEVMVVTRAFIAEY-------LQNGGEVSQKEPQKHENPVEKIINREYTY 214
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSM--RGACSGCPSASETLKY 170
++ Q+I +VL+ V PAV DGG I Y + M +GACSGCPS++ TLK
Sbjct: 215 TE----QKISDVLNEYVAPAVENDGGKISLMEYDESTKTAKMLLQGACSGCPSSTATLKG 270
Query: 171 GVANILNHFVPEV 183
G+ N+L F+P++
Sbjct: 271 GIENVLKQFLPDL 283
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E T NP +KF+ L+ G++ + PLA +F+ P + ++ +FI V K
Sbjct: 7 EATENPRVMKFV-ADYNLIPGSLELDRNSDISEIPLAQELFNYPFVDKIFITANFIAVAK 65
Query: 66 -DQYDWEHLRPPVLGMIMEHFISG 88
D +WEH+ + +I + ++
Sbjct: 66 QDTVEWEHVVQSLKNVIEDELLAN 89
>gi|159163237|pdb|1VEH|A Chain A, Solution Structure Of Rsgi Ruh-018, A Nifu-Like Domain Of
Hirip5 Protein From Mouse Cdna
Length = 92
Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 54/73 (73%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
VV IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 14 VVAMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNML 73
Query: 177 NHFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 74 QFYIPEVEGVEQV 86
>gi|256089666|ref|XP_002580899.1| iron-sulfur cluster scaffold protein nfu-related [Schistosoma
mansoni]
gi|238666574|emb|CAZ37138.1| iron-sulfur cluster scaffold protein nfu-related [Schistosoma
mansoni]
Length = 153
Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+FIQ ++TPNP +LK+ PG+ VL G F + ++ SPLA ++F I G+ V+FG DF
Sbjct: 44 LFIQVQETPNPNSLKYFPGKPVLGSGTRDFPSCTQSTSSPLARQLFRIEGVERVFFGPDF 103
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDM 100
IT+ K D ++W ++P V IM+ + SG P++ D+
Sbjct: 104 ITITKNDDFEWAVIKPDVYATIMDFYSSGQPVVSEEKAQDL 144
>gi|297830796|ref|XP_002883280.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329120|gb|EFH59539.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 96
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYG 171
DS V IKE+L+ R+RPAV DGGDI + G+ GIV L M+GACSGCPS+S TLK G
Sbjct: 2 DSETVAMIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKSG 61
Query: 172 VANILNHFVPEVKDIR 187
+ N+L H+V EVK +
Sbjct: 62 IENMLMHYVSEVKGVE 77
>gi|126668356|ref|ZP_01739314.1| hypothetical protein MELB17_13022 [Marinobacter sp. ELB17]
gi|126627172|gb|EAZ97811.1| hypothetical protein MELB17_13022 [Marinobacter sp. ELB17]
Length = 211
Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 88/178 (49%), Gaps = 9/178 (5%)
Query: 10 NPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKD-QY 68
+P T KFI + + G F N + A SPL ++F++PG+A++ +TV K+
Sbjct: 21 DPDTCKFIVSRTLHPGGPFFFGNKERAVGSPLGEQLFALPGVANLLIADSVVTVCKEPAA 80
Query: 69 DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNR 128
W L+ + I SG P I +M + G ++D+ + ++E+LD
Sbjct: 81 SWSGLKAGIGMAIRTQLRSGVPAIL-----EMPAHNRRQG---KTDAELTTAVQELLDKE 132
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
V ++A GG I G R G + ++M G C GC S+ TL+ G +L PE+++I
Sbjct: 133 VNRSIANHGGKISIVGVRQGKLSITMSGGCQGCASSQVTLRQGFEVMLKRVAPEIEEI 190
>gi|322503448|emb|CBZ38533.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 299
Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 13/196 (6%)
Query: 1 MFIQTEDTPNPATLKF-IPG---QVVLVEG-AIHFSNAKEAEISPLASRIFSI--PGIAS 53
M + + TPNP F IP + + +G + ++ A + PL+ +F + S
Sbjct: 50 MQLHAQRTPNPLCHSFTIPADSFESFVPQGQSCEVAHRGLAWVHPLSQGLFEQYPQELMS 109
Query: 54 VYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE 112
V+ +++ DW + + + + I + I + DD+ D
Sbjct: 110 VFIAPRHVSISVYTNVDWSKIEWSISSFLGHYLIFTNACISPAKEYTLIEDDLELKD--- 166
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKY 170
+DS V+Q IKE+L +VRP V RDGGD+ + + GIV L+M GAC CPS+ TLK
Sbjct: 167 TDSEVLQCIKELLREQVRPMVQRDGGDVKLLNFNEKTGIVSLAMLGACKTCPSSQNTLKD 226
Query: 171 GVANILNHFVPEVKDI 186
G+ ++ HF+PEV ++
Sbjct: 227 GIERVMKHFLPEVTEV 242
>gi|261332565|emb|CBH15560.1| HIRA-interacting protein 5, putative [Trypanosoma brucei gambiense
DAL972]
Length = 261
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 97/197 (49%), Gaps = 15/197 (7%)
Query: 1 MFIQTEDTPNPATLKF-IPGQV---VLVEG-AIHFSNAKEAEISPLASRIFSI--PGIAS 53
M + + TPNP+ F IP + +G ++ A + PL+ IF +AS
Sbjct: 11 MQLHSLPTPNPSCYTFHIPSSTYDNFIPDGQTCDVAHMSLAWVHPLSQGIFEQYPQEVAS 70
Query: 54 VYFG--YDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI 111
V+ + ITV DW L + I + + + + DD+
Sbjct: 71 VFIAPRHTSITV-HPHVDWNKLEWSISSFIGHYLVFTNACFPAAAEYALLEDDLV---IH 126
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLK 169
E DS V+Q IKE++ +VRP V RDGGD+ + + G+V L+M GAC CPS+ TLK
Sbjct: 127 EDDSEVLQCIKELVRGQVRPMVQRDGGDVKLLNFNEKTGVVSLAMLGACRTCPSSQNTLK 186
Query: 170 YGVANILNHFVPEVKDI 186
GV +L HF+PEVK++
Sbjct: 187 DGVERLLKHFLPEVKEV 203
>gi|71747438|ref|XP_822774.1| HIRA-interacting protein 5 [Trypanosoma brucei TREU927]
gi|70832442|gb|EAN77946.1| HIRA-interacting protein 5, putative [Trypanosoma brucei]
Length = 261
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 97/197 (49%), Gaps = 15/197 (7%)
Query: 1 MFIQTEDTPNPATLKF-IPGQV---VLVEG-AIHFSNAKEAEISPLASRIFSI--PGIAS 53
M + + TPNP+ F IP + +G ++ A + PL+ IF +AS
Sbjct: 11 MQLHSLPTPNPSCYTFHIPSSTYDNFIPDGQTCDVAHMGLAWVHPLSQGIFEQYPQEVAS 70
Query: 54 VYFG--YDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI 111
V+ + ITV DW L + I + + + + DD+
Sbjct: 71 VFIAPRHTSITV-HPHVDWNKLEWSISSFIGHYLVFTNACFPAAAEYALLEDDLV---IH 126
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLK 169
E DS V+Q IKE++ +VRP V RDGGD+ + + G+V L+M GAC CPS+ TLK
Sbjct: 127 EDDSEVLQCIKELVREQVRPMVQRDGGDVKLLNFNEKTGVVSLAMLGACRTCPSSQNTLK 186
Query: 170 YGVANILNHFVPEVKDI 186
GV +L HF+PEVK++
Sbjct: 187 DGVERLLKHFLPEVKEV 203
>gi|157876630|ref|XP_001686660.1| hypothetical protein [Leishmania major strain Friedlin]
gi|68129735|emb|CAJ09041.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 311
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 13/189 (6%)
Query: 8 TPNPATLKF-IPG---QVVLVEG-AIHFSNAKEAEISPLASRIFSI--PGIASVYFGYDF 60
TPNP F IP + + +G + ++ A + PL+ +F + SV+
Sbjct: 69 TPNPLCHTFTIPADSFESFVPQGQSCEVAHRGLAWVHPLSQGLFEQYPQELMSVFIAPRH 128
Query: 61 ITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+++ DW + + + + I + I + DD+ D +D+ V+Q
Sbjct: 129 VSISVYTNVDWSKIEWSISSFLGHYLIFTNACISPAKEYTLMEDDLELKD---TDTEVLQ 185
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L +VRP V RDGGD+ + + GIV L+M GAC CPS+ TLK G+ ++
Sbjct: 186 CIKELLREQVRPMVQRDGGDVKLLNFNEKTGIVSLAMLGACKTCPSSQNTLKDGIERVMK 245
Query: 178 HFVPEVKDI 186
HFVPEV ++
Sbjct: 246 HFVPEVTEV 254
>gi|323308188|gb|EGA61437.1| Nfu1p [Saccharomyces cerevisiae FostersO]
Length = 109
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCP 162
M + E D V + I+E++D R+RPA+ DGGDI ++G+ + G V+L ++GAC+ C
Sbjct: 1 MPKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCS 60
Query: 163 SASETLKYGVANILNHFVPEVKDI 186
S+ TLKYG+ ++L H+V EVK++
Sbjct: 61 SSEVTLKYGIESMLKHYVDEVKEV 84
>gi|322490669|emb|CBZ25931.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 301
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 13/196 (6%)
Query: 1 MFIQTEDTPNPATLKF-IPG---QVVLVEG-AIHFSNAKEAEISPLASRIFS--IPGIAS 53
M + + TPNP F IP + + +G + ++ A + PL+ +F + S
Sbjct: 52 MQLHAQPTPNPLCHSFTIPADSFESFVPQGQSCEVAHRGLAWVHPLSQGLFEQYSQEVMS 111
Query: 54 VYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE 112
V+ +++ +W + + + + I + I + DD+ D
Sbjct: 112 VFIAPRHVSISVYTNVEWSKIEWSISSFLGHYLIFNNTCISPAKEYTLIEDDLELKD--- 168
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKY 170
+DS V+Q IKE+L +VRP V RDGGD+ + + G+V L+M GAC CPS+ TLK
Sbjct: 169 TDSEVLQCIKELLREQVRPMVQRDGGDVKLLNFNEKTGVVSLAMLGACKTCPSSQNTLKD 228
Query: 171 GVANILNHFVPEVKDI 186
G+ ++ HF+PEV ++
Sbjct: 229 GIERVMKHFLPEVTEV 244
>gi|228472622|ref|ZP_04057382.1| nitrogen-fixing NifU domain protein [Capnocytophaga gingivalis ATCC
33624]
gi|228276035|gb|EEK14791.1| nitrogen-fixing NifU domain protein [Capnocytophaga gingivalis ATCC
33624]
Length = 299
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 22/186 (11%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E TPNP +KF+ + LV F +EAE SPLA +F + SV+F ++++
Sbjct: 111 IYVESTPNPMAMKFVANKK-LVSRPYEFKTIEEAENSPLAQALFGFDFVKSVFFDANYVS 169
Query: 63 VGK--DQYDWEHLRPPVLGMIMEHFISGDPII------HNGGLGDMKLDDMGSGDFIESD 114
+ + WE + + ++ + G ++ + G +L D+ S
Sbjct: 170 ITRLPRSTPWEEVMMETREFLRQYLMEGKTVVKVAVSEEDRPKGLPRLGDIYS------- 222
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGV 172
++I +LD +RPAV+ DGG+I F Y V + ++GAC+GCPS+ TLK G+
Sbjct: 223 ----KKIVALLDQYIRPAVSSDGGNIEFVSYDKETHKVKVVLQGACNGCPSSRITLKQGI 278
Query: 173 ANILNH 178
+L
Sbjct: 279 EGLLRE 284
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M +Q + T +P ++ + VVLV+G +S + SPLA + +P I +VYF +F
Sbjct: 1 MKLQIKYTADPTIVQ-LEAPVVLVKGNYQYSKGDNTQDSPLAGELLRLPFIKTVYFSANF 59
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGG 96
I + WE + P ++G I G+ +++ G
Sbjct: 60 IALQSTGNIRWEEVAPELVGQIETALSQGEALVYLPG 96
>gi|301166538|emb|CBW26114.1| putative nitrogen fixation-related protein [Bacteriovorax marinus
SJ]
Length = 184
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 11/185 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M IQ + TPNP LKFI + V EG + + + + LA +F++ G+ ++F +
Sbjct: 1 MDIQIQPTPNPNALKFILDKPVKNEGNSSYKSPMDCGDNNLALTLFTVRGVDQLHFYDNV 60
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
IT+ K Y DWE + P ++ I + DP D + + S ++
Sbjct: 61 ITITKFGYEDWESMEPTIMDYINSEYPKHDP---------NYFDPDPEAERRANLSPELK 111
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE-TLKYGVANILNH 178
I+ +LD +RP + DGGDI + D I+ + +GAC CPS++ TL+ A + +
Sbjct: 112 EIEAILDKTIRPGLQGDGGDIQTISFEDNILLVQYQGACGTCPSSTTGTLEAIKAILRDE 171
Query: 179 FVPEV 183
+ P++
Sbjct: 172 YNPDI 176
>gi|154345572|ref|XP_001568723.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134066065|emb|CAM43852.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 260
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Query: 1 MFIQTEDTPNPATLKF-IPG---QVVLVEG-AIHFSNAKEAEISPLASRIFSI--PGIAS 53
M + + TPNP F IP + + +G + ++ A + PL+ +F +
Sbjct: 11 MQLHAQPTPNPLCHSFSIPADSFESFVPQGQSCEVAHRGLAWVHPLSQGLFEQYPQEVMC 70
Query: 54 VYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE 112
V+ +++ DW + + + + I + + + DD+ D
Sbjct: 71 VFIAPRHVSISVYTNVDWSKIEWSISSFLGHYLIFNNACVSPAKEYTLIEDDLELKD--- 127
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKY 170
+DS V+Q IKE+L +VRP V RDGGD+ + + G+V L+M GAC CPS+ TLK
Sbjct: 128 NDSEVLQCIKELLREQVRPMVQRDGGDVKLLNFNEKTGVVSLAMLGACRTCPSSQNTLKD 187
Query: 171 GVANILNHFVPEVKDI 186
G+ ++ HF+PEV ++
Sbjct: 188 GIERVMKHFLPEVTEV 203
>gi|238568059|ref|XP_002386363.1| hypothetical protein MPER_15421 [Moniliophthora perniciosa FA553]
gi|215438109|gb|EEB87293.1| hypothetical protein MPER_15421 [Moniliophthora perniciosa FA553]
Length = 105
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPN +LKFIPG V+ EG F + + A SPLA R+ I G+ +V++G DF
Sbjct: 1 MFIQTETTPNDDSLKFIPGIPVMGEGTAEFLDTRSALASPLAIRLMGIEGVKAVFYGPDF 60
Query: 61 ITVGKDQYD-WEHLRPPVLGMIMEHFISGDPIIHN 94
+T+ KD + W ++P V ++ME F SG + +
Sbjct: 61 VTISKDSENPWAVIKPEVYSILMEFFSSGQKMFRS 95
>gi|237843489|ref|XP_002371042.1| NifU-like domain-containing protein [Toxoplasma gondii ME49]
gi|211968706|gb|EEB03902.1| NifU-like domain-containing protein [Toxoplasma gondii ME49]
gi|221484803|gb|EEE23097.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 235
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 46 FSIPGIASVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNG-GLGDMKLD 103
F I G +SV ++TV K + DW+ L PV I +H SG P + D+
Sbjct: 24 FQIDGTSSVLIAGGYVTVVKARDTDWKDLEEPVKRCIQDHLTSGIPAVQRAVSSEDVSGA 83
Query: 104 DMGSGDFIESDSA-------VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSM 154
G + E +A + + I+E+L R RP + DGGD+ + + GIV++ +
Sbjct: 84 AEGRPEVPEKKNAKSEEEEDLSEAIRELLHMRARPMLQADGGDLEMMRFDEETGIVWVHL 143
Query: 155 RGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+G+C GCPS+ T+K G+ +L +++PEV+ I V
Sbjct: 144 KGSCEGCPSSLITVKRGMKQMLQYYIPEVRTILRV 178
>gi|221504979|gb|EEE30644.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 235
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 13/156 (8%)
Query: 46 FSIPGIASVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNG--------- 95
F I G +SV ++TV K + DW+ L PV I +H SG P +
Sbjct: 24 FQIDGTSSVLIAGGYVTVVKARDTDWKDLEEPVKRCIQDHLTSGIPAVQRAVSSEDVSGA 83
Query: 96 GLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLS 153
G ++ + + E + + + I+E+L R RP + DGGD+ + + GIV++
Sbjct: 84 AEGRPQVPEKKNAKS-EEEEDLSEAIRELLHMRARPMLQADGGDLEMMRFDEETGIVWVH 142
Query: 154 MRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
++G+C GCPS+ T+K G+ +L +++PEV+ I V
Sbjct: 143 LKGSCEGCPSSLITVKRGMKQMLQYYIPEVRTILRV 178
>gi|145544593|ref|XP_001457981.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425800|emb|CAK90584.1| unnamed protein product [Paramecium tetraurelia]
Length = 196
Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 16/190 (8%)
Query: 1 MFIQTEDTPNPATLKFIP-GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+ IQ + PNP LKFIP G+ + + F+ + P+ G+ ++G D
Sbjct: 10 LLIQVKQVPNPNFLKFIPIGKQS--KRCLMFTTC----LKPIQHN-----GVTREFYGMD 58
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+I++ K ++ W+ LR + I + + S L + + S + DS +
Sbjct: 59 YISISKKNESKWDDLRSRIFEQIFDQYESNQEGSEKQFLFEGFKQNKDSV-IQDDDSKPI 117
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
Q IK++L++R+RP GGDIVF+ + + GI++L +G+C CP+ + TLK +L
Sbjct: 118 QLIKDILNHRIRPDFQEIGGDIVFREFDELNGILYLYKKGSCVECPATATTLKNRFEKML 177
Query: 177 NHFVPEVKDI 186
V +VK +
Sbjct: 178 CQNVDQVKQV 187
>gi|213407222|ref|XP_002174382.1| NifU-like protein c [Schizosaccharomyces japonicus yFS275]
gi|212002429|gb|EEB08089.1| NifU-like protein c [Schizosaccharomyces japonicus yFS275]
Length = 183
Score = 80.5 bits (197), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETL 168
++SDS V IKE++D+ +RP++ DGGD+ ++G+ + G V+L +RG+C C S+ TL
Sbjct: 66 LDSDSETVAMIKELIDSSIRPSIQEDGGDLEYRGFDEQTGTVYLKLRGSCRTCASSEITL 125
Query: 169 KYGVANILNHFVPEVKDI 186
K G+ +L H++PEVK++
Sbjct: 126 KSGIQQMLMHYIPEVKNV 143
>gi|325982994|ref|YP_004295396.1| Scaffold protein Nfu/NifU [Nitrosomonas sp. AL212]
gi|325532513|gb|ADZ27234.1| Scaffold protein Nfu/NifU [Nitrosomonas sp. AL212]
Length = 186
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 6/180 (3%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TPN LKFI + + A F NA+ A PLAS +F I + +V++ +ITV +
Sbjct: 8 EGTPNKNALKFILKEPLTWGVARSFDNAEAARDDPLASALFDIDHVTNVFYIDHWITVTQ 67
Query: 66 D-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEV 124
D + +W+ L + I + L ++ D + +++I +
Sbjct: 68 DGEANWQDLARDIADPIRAAPAASAQSAETVATASQALANLNPEDQLR-----LEKINIL 122
Query: 125 LDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVK 184
LD VRP + DGGD+ G I+ + +GAC CPS+ G+ N+L P+++
Sbjct: 123 LDEEVRPYLQSDGGDLHILGLEGNILHIHYQGACGTCPSSISGTLRGIENMLRTLEPDIQ 182
>gi|149195565|ref|ZP_01872622.1| putative nitrogen-fixing protein NifU [Lentisphaera araneosa
HTCC2155]
gi|149141027|gb|EDM29423.1| putative nitrogen-fixing protein NifU [Lentisphaera araneosa
HTCC2155]
Length = 185
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 17/182 (9%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TPNP LK++ + +L +G FS A+EA LA F++ G+ S+++ ++IT+ K
Sbjct: 8 ETTPNPNALKYVLNETILEDGICQFSAAEEA-TDDLARACFAVEGVVSIFYRDNYITITK 66
Query: 66 -DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEV 124
D DW + + D I + + K + +F E + V + I ++
Sbjct: 67 NDSADWFEIEMTI----------KDEINNRVEAIEFKAQAVPEINFGEKQTLVFE-IDDI 115
Query: 125 LDNRVRPAVARDGGDIVFKGYRDGIVFLSMR--GACSGCPSASETLKYGVANILN-HFVP 181
LD +RP +A DGG + D +V LS+R GAC CPS++ + NIL F P
Sbjct: 116 LDETIRPGLAMDGGGVDIIDLSDEMV-LSVRYQGACGSCPSSTTGTLMAIENILQEQFDP 174
Query: 182 EV 183
+
Sbjct: 175 RI 176
>gi|30249416|ref|NP_841486.1| nitrogen-fixing protein NifU [Nitrosomonas europaea ATCC 19718]
gi|30138779|emb|CAD85356.1| Nitrogen-fixing protein NifU [Nitrosomonas europaea ATCC 19718]
Length = 186
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 6/182 (3%)
Query: 4 QTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITV 63
+ E TPNP LKF+ + + A + +A++A PLA+ +F I + +V++ +IT+
Sbjct: 6 EIEGTPNPNALKFVLKEPLTWGVAKSYDHAEQAVDDPLAAALFDIDHVTNVFYVDRWITI 65
Query: 64 GKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIK 122
+D DW+ L V I + D L D+ E D ++RI
Sbjct: 66 TQDGGADWQDLAREVADPIRAAPAATDQSAAVVAAASRTLADLS-----EEDQQRLERIN 120
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
+LD VRP + DGGD+ I+ + +GAC CPS+ G+ +L P+
Sbjct: 121 ILLDEEVRPFLQHDGGDLHVLALEGNILRIHYQGACGTCPSSISGTLRGIEQLLRTIEPD 180
Query: 183 VK 184
++
Sbjct: 181 IR 182
>gi|313230548|emb|CBY18764.1| unnamed protein product [Oikopleura dioica]
Length = 140
Score = 77.4 bits (189), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 68/118 (57%), Gaps = 7/118 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA-IHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FI TE TPNP LKF+PG+ VL GA F + +EA SPLA RIF++ G+ +FG D
Sbjct: 15 LFITTEVTPNPNALKFVPGRDVLGAGATCDFPDIREAYKSPLAKRIFAVDGVKGCFFGPD 74
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKL----DDMGSGDFI 111
F+T+ + + DW ++ + ++ + F S PII+ L + DD+ G FI
Sbjct: 75 FVTIIRHDETDDWPVMKAELFAVLTDFFDSNLPIINEDALPNQDTIIYDDDVMLGFFI 132
>gi|313220326|emb|CBY31182.1| unnamed protein product [Oikopleura dioica]
Length = 140
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 68/118 (57%), Gaps = 7/118 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA-IHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FI TE TPNP LKF+PG+ VL GA F + +EA SPLA RIF++ G+ +FG D
Sbjct: 15 LFITTEVTPNPNALKFVPGRDVLGAGATCDFPDIREAYKSPLAKRIFAVDGVKGCFFGPD 74
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKL----DDMGSGDFI 111
F+T+ + + DW ++ + ++ + F S PII+ L + DD+ G FI
Sbjct: 75 FVTIIRHDETDDWPVMKAELFAVLTDFFDSNLPIINEDALPNQDTIIYDDDVMLGFFI 132
>gi|313230549|emb|CBY18765.1| unnamed protein product [Oikopleura dioica]
Length = 146
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLK 169
+S + VV IKE+LD R+RP V DGGDI F + G++ LS+ GAC+ CPS+ TLK
Sbjct: 44 KSANEVVAMIKELLDTRIRPTVMEDGGDIAFVSFDPDTGVLQLSLIGACATCPSSVVTLK 103
Query: 170 YGVANILNHFVPEVKDIRTV 189
+GV N++ ++PE+ ++ +
Sbjct: 104 HGVENMMKFYIPEITEVEQI 123
>gi|313220324|emb|CBY31180.1| unnamed protein product [Oikopleura dioica]
Length = 95
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDI F + G++ LS+ GAC+ CPS+ TLK+GV N++
Sbjct: 2 IKELLDTRIRPTVMEDGGDIAFVSFDPDTGVLQLSLIGACATCPSSVVTLKHGVENMMKF 61
Query: 179 FVPEVKDIRTV 189
++PE+ ++ +
Sbjct: 62 YIPEITEVEQI 72
>gi|294877894|ref|XP_002768180.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
gi|239870377|gb|EER00898.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
Length = 251
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 92/172 (53%), Gaps = 14/172 (8%)
Query: 22 VLVEGA--IHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK-DQYDWEHLRPPVL 78
+L GA + F + + + SPLA +F I G+ V + + V K DW ++P V
Sbjct: 70 ILPSGAKGMTFDSKEGSSQSPLALSLFKIEGVERVVLTHHNVAVSKVSSIDWCFVKPKVE 129
Query: 79 GMIMEHF-ISGDPIIHNGGLG-DMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARD 136
++ F + G ++ L + ++++ +E RI EVLD+R+RP + D
Sbjct: 130 SVLSNFFAVPGLQSVYRSALQFETEVEEAEKAKLME-------RIAEVLDDRIRPVLQDD 182
Query: 137 GGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
GGD+ + + G++ + ++GAC+GCP +S TL++ + N+L VPEVK +
Sbjct: 183 GGDVDVADFDEETGVLSVRLKGACAGCPMSSVTLRFRIENMLVQSVPEVKKV 234
>gi|294941309|ref|XP_002783074.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
gi|239895342|gb|EER14870.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
Length = 165
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVAN 174
VV+ I E+L+ R++P V RDGGD+ F + G++ + + G+C+GCP +S TLK+G+
Sbjct: 41 VVKSIHEILEQRIKPFVERDGGDVEFIAFDSDTGVLQIRLVGSCAGCPKSSVTLKFGIQR 100
Query: 175 ILNHFVPEVKDI 186
++ H++PEVK++
Sbjct: 101 MVCHYIPEVKNV 112
>gi|149036648|gb|EDL91266.1| histone cell cycle regulation defective interacting protein 5
(predicted), isoform CRA_b [Rattus norvegicus]
Length = 79
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 44/60 (73%)
Query: 130 RPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L ++PEV+ + V
Sbjct: 6 RPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPEVEGVEQV 65
>gi|169350337|ref|ZP_02867275.1| hypothetical protein CLOSPI_01098 [Clostridium spiroforme DSM 1552]
gi|169293120|gb|EDS75253.1| hypothetical protein CLOSPI_01098 [Clostridium spiroforme DSM 1552]
Length = 83
Score = 70.5 bits (171), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + ++ I++V+ N++RP + RDGGDI ++DGIV++ M GAC+GC ETLK GV
Sbjct: 2 ENMSTIEEIEKVI-NKLRPYLNRDGGDIELVDFKDGIVYVKMLGACAGCAMLDETLKDGV 60
Query: 173 ANILNHFVPEVKDIRTV 189
IL VP V +++ V
Sbjct: 61 EQILMEEVPGVLEVKNV 77
>gi|320526969|ref|ZP_08028158.1| NifU-like domain protein [Solobacterium moorei F0204]
gi|320132554|gb|EFW25095.1| NifU-like domain protein [Solobacterium moorei F0204]
Length = 109
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++QRI+ LD ++RP + DGGD+ GY DG+V ++M GAC+GC TL G+ IL
Sbjct: 26 LLQRIQHTLD-KIRPYIQADGGDVFLVGYADGVVTVTMTGACNGCMVMDSTLNDGIKAIL 84
Query: 177 NHFVPEVKDIR 187
VPEV D+R
Sbjct: 85 LDEVPEVHDVR 95
>gi|70940575|ref|XP_740685.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56518569|emb|CAH83895.1| hypothetical protein PC401665.00.0 [Plasmodium chabaudi chabaudi]
Length = 191
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLK 169
E ++ IK +++ RVRP V DGGDI F + GIV++ ++GAC GC + TL+
Sbjct: 105 EEIMEIISSIKLLIEKRVRPIVVNDGGDIKFVCFDMDSGIVYVQLQGACVGCSQSEVTLQ 164
Query: 170 YGVANILNHFVPEVKDIRTV 189
Y + N+L +++ E+K+I+ +
Sbjct: 165 YMIKNMLTYYISEIKEIKNI 184
>gi|238604262|ref|XP_002396156.1| hypothetical protein MPER_03666 [Moniliophthora perniciosa FA553]
gi|215468178|gb|EEB97086.1| hypothetical protein MPER_03666 [Moniliophthora perniciosa FA553]
Length = 115
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 124 VLDNRVRPAVARDGGDIVFKGYRD---GIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
++ RVRPA+ DGGDI ++G+ + G+V + ++G+C GC S++ TLK G+ +L H++
Sbjct: 21 AVETRVRPAIQEDGGDIEYRGFDEDGSGLVKIKLKGSCRGCDSSTVTLKSGIERMLMHYI 80
Query: 181 PEVKDIRTV 189
PEVK + V
Sbjct: 81 PEVKGVEQV 89
>gi|156081764|ref|XP_001608375.1| hypothetical protein [Plasmodium vivax SaI-1]
gi|148800946|gb|EDL42351.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 191
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVAN 174
++ IK +++ RVRP + DGGDI F + DGIV++ + GAC C + TL+Y + N
Sbjct: 110 IISSIKLLIEKRVRPVIVNDGGDIKFICFDIDDGIVYVQLEGACVTCSQSEITLQYMIKN 169
Query: 175 ILNHFVPEVKDIRTV 189
+L +++ E+K+I+ V
Sbjct: 170 MLTYYISEIKEIKNV 184
>gi|312213452|emb|CBX93534.1| hypothetical protein [Leptosphaeria maculans]
Length = 186
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG--------AIHFSNAKEAEISPLASRIFSIPGIA 52
MFIQTE TPN LKF P VL E S SPLA+ + +I G+
Sbjct: 71 MFIQTEPTPNDDALKFNPNARVLSESISSPYLEYLTPRSTLAPPHPSPLAAALMNIDGVT 130
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPI 91
SV+FG D+ITV KD W H++P V +I E SG I
Sbjct: 131 SVFFGTDYITVTKDSGTPWAHIKPEVFALITEFMTSGQAI 170
>gi|221054900|ref|XP_002258589.1| NifU-like protein [Plasmodium knowlesi strain H]
gi|193808658|emb|CAQ39361.1| NifU-like protein, putative [Plasmodium knowlesi strain H]
Length = 191
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVAN 174
++ IK +++ RVRP + DGGDI F + DGIV++ + GAC C + TL+Y + N
Sbjct: 110 IISSIKLLIEKRVRPVIVNDGGDIKFICFDVDDGIVYVQLEGACVTCSQSEITLQYMIKN 169
Query: 175 ILNHFVPEVKDIRTV 189
+L +++ E+K+I+ V
Sbjct: 170 MLTYYISEIKEIKNV 184
>gi|89900651|ref|YP_523122.1| nitrogen-fixing NifU-like protein [Rhodoferax ferrireducens T118]
gi|89345388|gb|ABD69591.1| nitrogen-fixing NifU-like [Rhodoferax ferrireducens T118]
Length = 186
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 6/184 (3%)
Query: 4 QTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITV 63
+ EDTPNP KF+ + + A + NA++A+ LAS +F+I + +V++ ++TV
Sbjct: 6 EIEDTPNPNARKFVLREPLTWGIAHSYENAEQAQGDALASALFAIDHVTNVFYIDRWLTV 65
Query: 64 GKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIK 122
+D Q +W+ L + + P + D D + I+
Sbjct: 66 TQDGQANWDALVREIAVPL-----RAAPAASEQSAAAVFEARAHVADLSAQDRQRLDDIE 120
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
+LD +RP + DGGD+ G + + +GAC CPSA G+ + L P+
Sbjct: 121 LILDQEIRPYLQSDGGDLHILGLAGNQLIVHYQGACGTCPSAISGTLQGIESRLRTLEPD 180
Query: 183 VKDI 186
++ I
Sbjct: 181 IEVI 184
>gi|82701834|ref|YP_411400.1| nitrogen-fixing NifU-like [Nitrosospira multiformis ATCC 25196]
gi|82409899|gb|ABB74008.1| Nitrogen-fixing NifU-like protein [Nitrosospira multiformis ATCC
25196]
Length = 186
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 6/184 (3%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
++ E TPN LKFI + + + NA++A+ PLA +F I + +V++ +I
Sbjct: 4 IVEIEGTPNRNALKFILKEPLTWGVTRSYDNAEQAKGDPLAEALFDIDHVTNVFYVDRWI 63
Query: 62 TVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
TV +D DW+ L V I + ++ ++ D +
Sbjct: 64 TVTQDGAADWQDLAREVADPIRAAPAADAQTAATIAAAGAEIANLSP-----EDQQRLNL 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I E+LD +RP + DGGD+ G + + +GAC CPS+ G+ N+L
Sbjct: 119 INEMLDEEIRPYLQSDGGDLHVLGLEGNRLSVHYQGACGTCPSSITGTLRGIQNMLRSIE 178
Query: 181 PEVK 184
P+++
Sbjct: 179 PDLE 182
>gi|302342797|ref|YP_003807326.1| nitrogen-fixing NifU domain protein [Desulfarculus baarsii DSM
2075]
gi|301639410|gb|ADK84732.1| nitrogen-fixing NifU domain protein [Desulfarculus baarsii DSM
2075]
Length = 73
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILN 177
QR++E LD ++RPA+ +DGGD+ D G+V + ++GAC GCP + TLK G+ +L
Sbjct: 3 QRVQEALD-KIRPALQKDGGDVKLVDVSDDGVVKVQLQGACHGCPMSQMTLKMGIEKVLK 61
Query: 178 HFVPEVKDIRTV 189
VPEV+ + +V
Sbjct: 62 QNVPEVQKVESV 73
>gi|167756739|ref|ZP_02428866.1| hypothetical protein CLORAM_02286 [Clostridium ramosum DSM 1402]
gi|167702914|gb|EDS17493.1| hypothetical protein CLORAM_02286 [Clostridium ramosum DSM 1402]
Length = 83
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+++ ++ +++V+ N++RP + RDGGDI ++DGIV++ M GAC+GC ETLK GV
Sbjct: 2 ENTSTIEEVEKVI-NKLRPYLNRDGGDIELIDFKDGIVYVKMLGACAGCSMLDETLKDGV 60
Query: 173 ANILNHFVPEVKDIRTV 189
IL VP V ++ +
Sbjct: 61 EQILMEEVPGVLGVQNI 77
>gi|120434576|ref|YP_860269.1| hypothetical protein GFO_0207 [Gramella forsetii KT0803]
gi|117576726|emb|CAL65195.1| conserved hypothetical protein [Gramella forsetii KT0803]
Length = 257
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNPA +KF+ + LV A+ F N +A+ +PL ++F P + ++ ++++
Sbjct: 110 VYAESTPNPAVMKFVANKK-LVLKAVEFKNIDDAKNAPLVQKLFHFPFVKEIFIDENYVS 168
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGL---GDMKLDDMGSGDFIESDSAVV 118
+ K D WE + + I + G+ +++ + D + E+
Sbjct: 169 IQKYDMAGWEEITMELREFIRNYIEEGNEVLNVESVQVAADSSSEKGTKTPEFENLDDTS 228
Query: 119 QRIKEVLDNRVRPAVARDGGDIVF 142
Q+I +LD ++PAVA DGG+I+F
Sbjct: 229 QQIIAILDEYIKPAVASDGGNILF 252
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 8 TPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK-D 66
T P+ KF + + + F N EA SP+A ++F +P + +VY +FI + K D
Sbjct: 11 TTTPSIAKFEADKFLTRHESFEFKNIDEASRSPIAQQLFYLPFVKTVYIAQNFIAIEKYD 70
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIH 93
+WE + V I + G +I
Sbjct: 71 IVEWEDVEKEVAEQIETYLNKGGEVIK 97
>gi|71416241|ref|XP_810158.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70874651|gb|EAN88307.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 452
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 70 WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRV 129
W L+ V ++ +H SG P + + D + E DS VV +KE++ +
Sbjct: 301 WSELKLHVSALLTDHLFSGRPHV-DPDAPHPHPDTLPQ----EGDSEVVLILKELISTTI 355
Query: 130 RPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
RP + DGGDI F G++++ M GAC C S+ TL + H+VPEV ++R
Sbjct: 356 RPQLQLDGGDIRFVSLEGGVMYVEMLGACRRCKSSKTTLSDLIERTTRHWVPEVHEVR 413
>gi|91200475|emb|CAJ73523.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 72
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I+E L +RPA+ DGGDI Y DGIV + ++GAC CPS+ TLKYGV L
Sbjct: 3 EKIEEALKG-IRPALQADGGDIELVDYEDGIVKVRLKGACGSCPSSLATLKYGVEARLKE 61
Query: 179 FVPEVKDI 186
+PE++ +
Sbjct: 62 IIPEIESV 69
>gi|322820651|gb|EFZ27204.1| HIRA-interacting protein 5, putative [Trypanosoma cruzi]
Length = 452
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 70 WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRV 129
W L+ V ++ +H SG P + + D + E DS VV +KE++ +
Sbjct: 300 WSELKLHVSALLTDHLFSGRPHV-DPDAPHPHPDTLPQ----EGDSEVVLILKELISTTI 354
Query: 130 RPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
RP + DGGDI F G++++ M GAC C S+ TL + H+VPEV ++R
Sbjct: 355 RPQLQLDGGDIRFVSLEGGVMYVEMLGACRRCKSSKTTLSDLIERTTRHWVPEVHEVR 412
>gi|312880024|ref|ZP_07739824.1| nitrogen-fixing NifU domain protein [Aminomonas paucivorans DSM
12260]
gi|310783315|gb|EFQ23713.1| nitrogen-fixing NifU domain protein [Aminomonas paucivorans DSM
12260]
Length = 76
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
QR+ +V+ ++RP + GGDI FKG+ + G V +++ GAC GCP A ETL+ V +L
Sbjct: 3 QRVLQVIQEQIRPNLQAHGGDIEFKGFDEVEGAVTVALTGACGGCPFAQETLRVQVEQVL 62
Query: 177 NHFVPEVKDIR 187
+PEVK +R
Sbjct: 63 RAAIPEVKSVR 73
>gi|71665794|ref|XP_819863.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70885183|gb|EAN98012.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 426
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 70 WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRV 129
W L+ V ++ +H SG P + + D + E DS VV +KE++ +
Sbjct: 274 WSELKLHVSALLTDHLFSGRPHV-DPDAPHPHPDTLPQ----EGDSEVVLILKELISTTI 328
Query: 130 RPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
RP + DGGDI F G++++ M GAC C S+ TL + H+VPEV ++R
Sbjct: 329 RPQLQLDGGDIRFVSLEGGVMYVEMLGACRRCKSSKTTLSDLIERTTRHWVPEVHEVR 386
>gi|254439456|ref|ZP_05052950.1| NifU-like domain protein [Octadecabacter antarcticus 307]
gi|198254902|gb|EDY79216.1| NifU-like domain protein [Octadecabacter antarcticus 307]
Length = 414
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 14/178 (7%)
Query: 10 NPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKD-QY 68
+P TL+FI V ++ + +A + +PLA +F+I G+ V I V +
Sbjct: 18 DPQTLRFILDAPVQDSTSVCYDDA--SADAPLARALFAISGVQRVEVDGASIYVSRSADV 75
Query: 69 DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNR 128
DW L+ P+ I + ++ L + + G+ D+ + + ++LD+
Sbjct: 76 DWSALKAPIAAAIRD-------VLEREALPLGQRSEAPKGE----DALLFLAVADLLDSE 124
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
PA+A GG + + + V+L M G C GC ++S TL+ G+ +L +P + +I
Sbjct: 125 ANPAIASHGGSVAVERVENSDVYLRMSGGCQGCAASSATLRQGIETMLRAGLPAIGEI 182
>gi|296005287|ref|XP_002808974.1| NifU-like protein, putative [Plasmodium falciparum 3D7]
gi|225631861|emb|CAX64255.1| NifU-like protein, putative [Plasmodium falciparum 3D7]
Length = 192
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVAN 174
++ IK +++ RVRP + DGGDI F + GIV++ + GAC C + TL+Y + N
Sbjct: 111 IISSIKLLIEKRVRPIILNDGGDIKFICFDVDKGIVYVQLEGACVTCAQSEVTLQYMIKN 170
Query: 175 ILNHFVPEVKDIRTV 189
+L +++ E+K+I+ V
Sbjct: 171 MLTYYISEIKEIKNV 185
>gi|118340603|gb|ABK80653.1| uncharacterized protein [uncultured marine Nitrospinaceae
bacterium]
Length = 253
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 14/189 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+ I+ + +P F + ++ + +F++ + AE S LA R+FS + +V
Sbjct: 61 VLIKAQPSPTGDQCLFTVNRSLMTGHSWYFADFESAEGSSLAERLFSQEDVETVLVCECT 120
Query: 61 ITVG---KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+T+ K +DW L V I E G+ +I + D+ ++ V
Sbjct: 121 VTITRKDKTLFDWGPLAKDVGTAIREAIQDGEGLIAEKIIADLP-----------TEEEV 169
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I++V+D V P VA GG+I R V + M G C GC +A TLK G+
Sbjct: 170 REGIQKVIDVEVNPGVAGHGGNISLLDVRGNSVTIQMGGGCQGCSAADLTLKQGIHTSFR 229
Query: 178 HFVPEVKDI 186
VP+V I
Sbjct: 230 TAVPKVGAI 238
>gi|313683413|ref|YP_004061151.1| nitrogen-fixing nifu domain protein [Sulfuricurvum kujiense DSM
16994]
gi|313156273|gb|ADR34951.1| nitrogen-fixing NifU domain protein [Sulfuricurvum kujiense DSM
16994]
Length = 91
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD ++Q ++ V+D ++RP +A DGGDI F G ++G +++ ++GAC GC S+ TLKYGV
Sbjct: 5 SDEELMQPVRNVID-KIRPTLALDGGDIAFLGVKNGTIYVQLQGACIGCSSSGNTLKYGV 63
Query: 173 ANIL 176
L
Sbjct: 64 ERQL 67
>gi|260892780|ref|YP_003238877.1| nitrogen-fixing NifU domain protein [Ammonifex degensii KC4]
gi|260864921|gb|ACX52027.1| nitrogen-fixing NifU domain protein [Ammonifex degensii KC4]
Length = 72
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 128 RVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
++RP + RDGGD+ DG+V + ++GAC GCP A TLK G+ IL VPEVK++
Sbjct: 11 QIRPHLQRDGGDVELVAVEDGVVKVRLKGACGGCPMAMVTLKQGIERILKEAVPEVKEVV 70
Query: 188 TV 189
V
Sbjct: 71 AV 72
>gi|15615981|ref|NP_244286.1| nitrogen fixation protein (NifU protein) [Bacillus halodurans
C-125]
gi|10176042|dbj|BAB07138.1| nitrogen fixation protein (NifU protein) [Bacillus halodurans
C-125]
Length = 79
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
+E+ + + +++KEVLD ++RP + RDGGD+ DGIV + + GAC CPS++ TLK
Sbjct: 1 METSTEMHEQVKEVLD-KLRPFLLRDGGDVELVDVEDGIVKVRLLGACGSCPSSTITLKA 59
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ L VP VK+I V
Sbjct: 60 GIERALLEEVPGVKEIEQV 78
>gi|237653650|ref|YP_002889964.1| nitrogen-fixing NifU domain protein [Thauera sp. MZ1T]
gi|237624897|gb|ACR01587.1| nitrogen-fixing NifU domain protein [Thauera sp. MZ1T]
Length = 202
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 10/183 (5%)
Query: 8 TPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQ 67
TPNP KF+ + HFS L + ++PG+ +Y FIT+ +D
Sbjct: 10 TPNPLANKFMLDAPLYTGAPRHFSAGVAVVGDTLGESLLAVPGVVDIYCTGGFITITRDP 69
Query: 68 -YDWEHLRPPVLGMIMEHF------ISGDPIIHNGGLGDMKLDDMGSGDFIE---SDSAV 117
W + P V +I H I+ + + + + +E D+ +
Sbjct: 70 GTPWSAIEPAVTELIEGHKARRVIGIANPAGPGGAAGAAIGAGEAVAEEPVEVEADDAEL 129
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ RI ++LD +RP + +DGG + ++ + + +GAC GCPS+S + + N+L
Sbjct: 130 LMRINQILDEHIRPFLDQDGGGLDVVKLKEFTLTVRYKGACGGCPSSSTGTLFAINNLLQ 189
Query: 178 HFV 180
++V
Sbjct: 190 NYV 192
>gi|288553995|ref|YP_003425930.1| hypothetical protein BpOF4_04870 [Bacillus pseudofirmus OF4]
gi|288545155|gb|ADC49038.1| hypothetical protein BpOF4_04870 [Bacillus pseudofirmus OF4]
Length = 79
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + +V++++EVLD ++RP + RDGGD+ DGIV + + GAC CPS++ TLK G+
Sbjct: 3 TSTEMVEQVQEVLD-KLRPFLLRDGGDVELVEVEDGIVKVRLLGACGSCPSSTITLKAGI 61
Query: 173 ANILNHFVPEVKDIRTV 189
L VP VK+I V
Sbjct: 62 ERALLEEVPGVKEIEQV 78
>gi|114331232|ref|YP_747454.1| NifU domain-containing protein [Nitrosomonas eutropha C91]
gi|114308246|gb|ABI59489.1| nitrogen-fixing NifU domain protein [Nitrosomonas eutropha C91]
Length = 186
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 16/187 (8%)
Query: 4 QTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITV 63
+ E TPNP LKFI + + ++NA++A PLA+ +F I + +V++ +IT+
Sbjct: 6 EIEGTPNPNALKFILKEPLTWGVTKSYNNAEQAADDPLAAALFDIDHVINVFYVDRWITI 65
Query: 64 GKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG-----DFIESDSAV 117
+D DW+ L V DPI D + + + E D
Sbjct: 66 TQDGGADWQDLAREV----------ADPIRAAPAATDQSATVVAAASEALANLSEEDQQR 115
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++RI +L+ VRP + DGGD+ ++ + +GAC CPS+ G+ +L
Sbjct: 116 LERINILLEEEVRPYLQHDGGDLHVLALEGSLLRIHYQGACGTCPSSISGTLRGIEQLLR 175
Query: 178 HFVPEVK 184
P+++
Sbjct: 176 TIEPDIR 182
>gi|258514732|ref|YP_003190954.1| nitrogen-fixing NifU domain-containing protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257778437|gb|ACV62331.1| nitrogen-fixing NifU domain protein [Desulfotomaculum acetoxidans
DSM 771]
Length = 73
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++KEVL +VRP + RDGGD+ + DGIV + ++GACSGCP A TLK G+ +L
Sbjct: 3 EKVKEVL-GKVRPYLQRDGGDVELVDITADGIVRVKLKGACSGCPGALITLKQGIERVLK 61
Query: 178 HFVPEVKDI 186
+PEVK +
Sbjct: 62 QEIPEVKGV 70
>gi|294901264|ref|XP_002777311.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
gi|239884853|gb|EER09127.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
Length = 299
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKY 170
S + V +RI+ +LD RVRP +A+DGGD F + + G V L++ G+C GCP + +TLK
Sbjct: 103 SSNEVEERIQSLLDTRVRPVIAQDGGDCEFISFDSQTGRVTLALHGSCEGCPQSVKTLKD 162
Query: 171 GVANILNHFVPEVKDI 186
+ L +V EV +
Sbjct: 163 SIERTLKFYVEEVSSV 178
>gi|291287157|ref|YP_003503973.1| nitrogen-fixing NifU domain protein [Denitrovibrio acetiphilus DSM
12809]
gi|290884317|gb|ADD68017.1| nitrogen-fixing NifU domain protein [Denitrovibrio acetiphilus DSM
12809]
Length = 75
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
QR++EVLD +VRP + DGGDI + DGIV + + GAC CP ++ TLK+GV L
Sbjct: 5 QRVEEVLD-QVRPTLQADGGDIELLDVSEDGIVKVQLTGACGSCPFSTMTLKHGVEARLK 63
Query: 178 HFVPEVKDIRTV 189
+PEVK++ ++
Sbjct: 64 DMIPEVKEVLSI 75
>gi|329904748|ref|ZP_08273923.1| nitrogen-fixing NifU-like protein [Oxalobacteraceae bacterium
IMCC9480]
gi|327547851|gb|EGF32611.1| nitrogen-fixing NifU-like protein [Oxalobacteraceae bacterium
IMCC9480]
Length = 186
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 6/181 (3%)
Query: 4 QTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITV 63
+ +DTPNP +KF + + A + N +A PLA+ +F++ + +V++ ++TV
Sbjct: 6 EIDDTPNPNAVKFTLHEPLSWGVAHAYDNPAQAAGDPLATALFALDHVTNVFYTDRWLTV 65
Query: 64 GKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIK 122
+D + DW P L ++ + P + + E + RI
Sbjct: 66 TQDGEADW-----PALVRLIAVPLRAAPAAAAQSAELVSAARLAVHTMSEDEQDRFARIT 120
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
++LD ++RPA+ DGGD+ G + + +GAC CPS+ + N+L P+
Sbjct: 121 DLLDLQIRPALQADGGDLHVLGLSGDTLSIHYQGACGTCPSSIGGTLASIENLLRSIEPD 180
Query: 183 V 183
+
Sbjct: 181 I 181
>gi|226314372|ref|YP_002774268.1| iron-sulfur cluster assembly protein [Brevibacillus brevis NBRC
100599]
gi|226097322|dbj|BAH45764.1| putative iron-sulfur cluster assembly protein [Brevibacillus brevis
NBRC 100599]
Length = 89
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E + ++ +++EVLD ++RP + RDGGD+ DGIV L + GAC CPS++ TLK G
Sbjct: 12 ECNMDIMDQVQEVLD-KLRPYLQRDGGDVQLVDVEDGIVKLRLMGACGSCPSSTITLKAG 70
Query: 172 VANILNHFVPEVKDIRTV 189
+ L +P +K+++ V
Sbjct: 71 IERALVEEIPGIKEVQQV 88
>gi|237734458|ref|ZP_04564939.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|229382278|gb|EEO32369.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 75
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
N++RP + RDGGDI ++DGIV++ M GAC+GC ETLK GV IL VP V +
Sbjct: 7 NKLRPYLNRDGGDIELIDFKDGIVYVKMLGACAGCSMLDETLKDGVEQILMEEVPGVLGV 66
Query: 187 RTV 189
+ +
Sbjct: 67 QNI 69
>gi|224543029|ref|ZP_03683568.1| hypothetical protein CATMIT_02223 [Catenibacterium mitsuokai DSM
15897]
gi|224524054|gb|EEF93159.1| hypothetical protein CATMIT_02223 [Catenibacterium mitsuokai DSM
15897]
Length = 84
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ IKEV+ +++RP + RDGGD+ F ++DGIV++ M GAC+GC T+K GV IL
Sbjct: 14 IEAIKEVI-HKLRPYLQRDGGDLEFVDFKDGIVYVHMLGACAGCMMLDSTIKDGVEQILI 72
Query: 178 HFVPEVKDIRTV 189
VP V +++ +
Sbjct: 73 EEVPGVIEVQAI 84
>gi|261333257|emb|CBH16252.1| HIRA-interacting protein 5, putative [Trypanosoma brucei gambiense
DAL972]
Length = 337
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 70 WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRV 129
W L+ V ++ +H SG I + D + + DS VV +KE++ +
Sbjct: 209 WSELKLHVSALLTDHLYSGRAHI-DADAPHPHPDTIPQ----DGDSEVVVVLKELISTTI 263
Query: 130 RPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
RP + DGGDI F G D ++ + M GAC C S+ TL+ + H+VPEV+ + V
Sbjct: 264 RPQLQADGGDIRFVGLADSVMLVEMLGACRKCRSSKTTLRDMIERTTRHWVPEVQKVEEV 323
>gi|169333923|ref|ZP_02861116.1| hypothetical protein ANASTE_00309 [Anaerofustis stercorihominis DSM
17244]
gi|169259488|gb|EDS73454.1| hypothetical protein ANASTE_00309 [Anaerofustis stercorihominis DSM
17244]
Length = 100
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 48/72 (66%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
S ++++I++VL+ +VRP++ GGD+V K Y D I+ + + G CSGCP+A T + +
Sbjct: 9 SMMIEKIEKVLNEKVRPSLNSHGGDVVIKSYEDNILRIKLIGKCSGCPAARTTNEDLIKI 68
Query: 175 ILNHFVPEVKDI 186
+ +PEVKD+
Sbjct: 69 SVMEEIPEVKDV 80
>gi|300087175|ref|YP_003757697.1| nitrogen-fixing NifU domain-containing protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299526908|gb|ADJ25376.1| nitrogen-fixing NifU domain protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 74
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++KEVL+ +VRP + DGGD+ + DGIV + + G+C+GCP + TLK G+ IL
Sbjct: 3 EKVKEVLE-QVRPNLQADGGDVELVSVSEDGIVTVKLTGSCAGCPMSQMTLKNGIERILK 61
Query: 178 HFVPEVKDI 186
VPEVK++
Sbjct: 62 REVPEVKEV 70
>gi|157874760|ref|XP_001685794.1| hypothetical protein [Leishmania major strain Friedlin]
gi|68128867|emb|CAJ06031.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 426
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLD 126
+ DW L+ V ++ +H SG+P H D E DS VV IKE++
Sbjct: 216 ETDWSELKLHVSALLTDHICSGNP--HVDPSAPHPHADTAPE---EGDSEVVLMIKELVS 270
Query: 127 NRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVK 184
+RP + DGGD+ F G+ G + + + GAC C S+ TL + H++PEV
Sbjct: 271 TTIRPQLQDDGGDLRFVGFDPVLGDMHVELLGACRTCKSSKTTLVDLIERTTRHWIPEVS 330
Query: 185 DIRTV 189
+R V
Sbjct: 331 AVRDV 335
>gi|322494548|emb|CBZ29850.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 426
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLD 126
+ DW L+ V ++ +H SG+P + + D + E DS VV IKE++
Sbjct: 216 ETDWSELKLHVSALLTDHICSGNPHV-DPSSSHPHADTLPE----EGDSEVVLLIKELVS 270
Query: 127 NRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVK 184
+RP + DGGD+ F G+ G + + + GAC C S+ TL + H++PEV+
Sbjct: 271 TTIRPQLQDDGGDLRFVGFDPVLGDMHVELLGACRTCKSSKTTLVDLIERTTRHWIPEVR 330
Query: 185 DIRTV 189
++ V
Sbjct: 331 AVKDV 335
>gi|319938275|ref|ZP_08012672.1| Fe/S-biogenesis protein NfuA [Coprobacillus sp. 29_1]
gi|319806568|gb|EFW03226.1| Fe/S-biogenesis protein NfuA [Coprobacillus sp. 29_1]
Length = 74
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ IK+V+ +++RP + RDGGDI F + +GIV++ M GAC+GC TLK GV IL
Sbjct: 5 EEIKKVI-HKLRPYLQRDGGDIEFIKFEEGIVYVQMHGACAGCTMLDATLKDGVEQILIE 63
Query: 179 FVPEVKDIRTV 189
VP V +++ +
Sbjct: 64 EVPGVLEVQAI 74
>gi|283768905|ref|ZP_06341815.1| NifU-like domain protein [Bulleidia extructa W1219]
gi|283104458|gb|EFC05832.1| NifU-like domain protein [Bulleidia extructa W1219]
Length = 100
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+++RI+ LD ++RP + DGGD G+ DG V +SM GAC GC TL G+ IL
Sbjct: 17 LLKRIQHTLD-KIRPYIQADGGDCELVGFDDGTVIISMTGACQGCGIIDITLNDGIKAIL 75
Query: 177 NHFVPEVKDIRTV 189
VPEVKD++ +
Sbjct: 76 MDEVPEVKDVKML 88
>gi|294897644|ref|XP_002776034.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
gi|239882510|gb|EER07850.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
Length = 154
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 12/144 (8%)
Query: 48 IPGIASVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHF-ISGDPIIHNGGLG-DMKLDD 104
I G+ V + + V K DW ++P V ++ F + G ++ L + ++++
Sbjct: 1 IEGVERVVLTHHNVAVSKVSSIDWCFVKPKVESVLSNFFAVPGLQSVYRYALQFETEVEE 60
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCP 162
+E RI EVLD+R+RP + DGGD+ + + G++ + ++GAC+GCP
Sbjct: 61 AEKAKLME-------RIAEVLDDRIRPVLQDDGGDVDVADFDEETGVLSVRLKGACAGCP 113
Query: 163 SASETLKYGVANILNHFVPEVKDI 186
+S TL++ + N+L VPEVK +
Sbjct: 114 MSSVTLRFRIENMLVQSVPEVKKV 137
>gi|56964703|ref|YP_176434.1| nitrogen fixation protein [Bacillus clausii KSM-K16]
gi|56910946|dbj|BAD65473.1| nitrogen fixation protein [Bacillus clausii KSM-K16]
Length = 79
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
+E+ + ++++++EVLD ++RP + RDGGD+ DG+V + + GAC CPS++ TLK
Sbjct: 1 METSTELMEQVQEVLD-KLRPFLLRDGGDVELIDVEDGVVKVRLLGACGSCPSSTITLKA 59
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ L VP + +I V
Sbjct: 60 GIERALLEEVPGITEIEQV 78
>gi|71748540|ref|XP_823325.1| HIRA-interacting protein 5 [Trypanosoma brucei TREU927]
gi|70832993|gb|EAN78497.1| HIRA-interacting protein 5, putative [Trypanosoma brucei]
Length = 243
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
DS VV +KE++ +RP + DGGDI F G D ++ + M GAC C S+ TL+ +
Sbjct: 154 DSEVVVVLKELISTTIRPQLQADGGDIRFVGLADSVMLVEMLGACRKCRSSKTTLRDMIE 213
Query: 174 NILNHFVPEVKDIRTV 189
H+VPEV+ + V
Sbjct: 214 RTTRHWVPEVQKVEEV 229
>gi|224437749|ref|ZP_03658696.1| hypothetical protein HcinC1_07235 [Helicobacter cinaedi CCUG 18818]
gi|313144195|ref|ZP_07806388.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313129226|gb|EFR46843.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 86
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q E++ ++VRP + DGGDI G RD V++ + GAC GCPS++ TLKY + N L
Sbjct: 9 LQTPVELVIDKVRPTLTLDGGDITLLGIRDAKVYVRLEGACKGCPSSANTLKYAIENRLK 68
>gi|123976981|ref|XP_001314690.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
gi|121897307|gb|EAY02432.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
Length = 103
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
F ++ ++ V+D RVRP + DGGDIV K DGIV + + G CSGCPS TL
Sbjct: 18 FAKATKEFFDKVNAVIDERVRPVLQMDGGDIVLKDITDGIVSVQLTGHCSGCPSRKNTLN 77
Query: 170 YGVANILNH 178
G+ L
Sbjct: 78 AGILGCLQE 86
>gi|167042854|gb|ABZ07571.1| putative NifU-like domain protein [uncultured marine microorganism
HF4000_ANIW137J11]
Length = 225
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I+ E T + +F+ + L +G F++ AE +PLA +F++P +++V D ++
Sbjct: 6 IRGEPTADQQVCRFVVDRS-LHDGNASFTSTAAAEGAPLAEALFALPDVSAVTIARDTVS 64
Query: 63 VGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K +W + + I SG+P + G+M SG+ + +R+
Sbjct: 65 VTKQGDAEWPEIGKLIGDAIRAQIASGEPAV-----GEMT---PASGE------ELFERV 110
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
+ VL N + P++A GG + + +G ++ M G C GC A TLK+G+ + L VP
Sbjct: 111 QAVLVNEINPSIANHGGVVTLQRIEEGKAYVQMGGGCQGCGMADVTLKHGIESYLRQKVP 170
Query: 182 EVKDI 186
E+ ++
Sbjct: 171 EISEV 175
>gi|189485737|ref|YP_001956678.1| hypothetical protein TGRD_734 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287696|dbj|BAG14217.1| conserved hypothetical protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 75
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++++ L++ VRP + D GD+ + DGIV + + G+C GCP A+ TL+YGV N +
Sbjct: 5 EKVEKALES-VRPHLQADCGDVELIDVSEDGIVKVKLTGSCGGCPMAAMTLQYGVTNTIK 63
Query: 178 HFVPEVKDIRTV 189
VPEVKD++++
Sbjct: 64 QAVPEVKDVQSI 75
>gi|291279936|ref|YP_003496771.1| nitrogen-fixing NifU domain protein [Deferribacter desulfuricans
SSM1]
gi|290754638|dbj|BAI81015.1| nitrogen-fixing NifU domain protein [Deferribacter desulfuricans
SSM1]
Length = 75
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+R++EVL N+VRP + DGGD+ + DG+V + + GAC CP ++ TLK+G+ L
Sbjct: 5 ERVQEVL-NQVRPGLQADGGDVELLDVTEDGVVKVQLTGACGSCPFSTMTLKHGIEMRLK 63
Query: 178 HFVPEVKDI 186
+PEVK++
Sbjct: 64 EMIPEVKEV 72
>gi|317130102|ref|YP_004096384.1| nitrogen-fixing NifU domain protein [Bacillus cellulosilyticus DSM
2522]
gi|315475050|gb|ADU31653.1| nitrogen-fixing NifU domain protein [Bacillus cellulosilyticus DSM
2522]
Length = 78
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+++ + +++EVLD ++RP + RDGGD+ DGIV + + GAC CPS++ TLK G+
Sbjct: 2 AEATMESQVQEVLD-KLRPFLLRDGGDVELVDVEDGIVKVRLMGACGSCPSSTITLKAGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L VP VK++ V
Sbjct: 61 ERALLEEVPGVKELEQV 77
>gi|307720216|ref|YP_003891356.1| nitrogen-fixing NifU domain-containing protein [Sulfurimonas
autotrophica DSM 16294]
gi|306978309|gb|ADN08344.1| nitrogen-fixing NifU domain protein [Sulfurimonas autotrophica DSM
16294]
Length = 91
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD +++ +K V+D +VRP++A DGGDI F ++G V++ ++GAC GC S+ TLKYGV
Sbjct: 5 SDEELLEPVKHVID-KVRPSLALDGGDIDFITVKNGNVYVQLKGACIGCASSGSTLKYGV 63
Query: 173 ANILNHFV-PEV 183
L + PE+
Sbjct: 64 ERQLRMDIHPEI 75
>gi|32267366|ref|NP_861398.1| hypothetical protein HH1867 [Helicobacter hepaticus ATCC 51449]
gi|32263419|gb|AAP78464.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 91
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
E++ +VRP + DGGDI G +D V++ + GAC GCPS++ TLKY + N L
Sbjct: 14 EIVIQKVRPTLTLDGGDITLLGIKDAKVYVRLEGACKGCPSSANTLKYAIENRLKE 69
>gi|146097555|ref|XP_001468136.1| hypothetical protein [Leishmania infantum]
gi|134072503|emb|CAM71216.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 448
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI--ESDSAVVQRIKEV 124
+ DW L+ V ++ +H SG+P + D + E DS VV IKE+
Sbjct: 238 ETDWSELKLHVSALLTDHICSGNPHVDPSA-------PHPHADTVPEEGDSEVVLMIKEL 290
Query: 125 LDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
+ +RP + DGGD+ F G+ G + + + GAC C S+ TL + H++PE
Sbjct: 291 VSTTIRPQLQDDGGDLRFVGFDPVLGDMHVELLGACRTCKSSKTTLVDLIERTTRHWIPE 350
Query: 183 VKDIRTV 189
V ++ V
Sbjct: 351 VSAVKDV 357
>gi|295401381|ref|ZP_06811352.1| nitrogen-fixing NifU domain protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|312109659|ref|YP_003987975.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y4.1MC1]
gi|294976596|gb|EFG52203.1| nitrogen-fixing NifU domain protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|311214760|gb|ADP73364.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y4.1MC1]
Length = 78
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD + ++++EVLD ++RP + RDGGD DG+V L + GAC CPS++ TLK G+
Sbjct: 2 SDQEIKEQVQEVLD-KLRPFLLRDGGDCELIDVEDGVVKLRLLGACGSCPSSTITLKAGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L VP + ++ V
Sbjct: 61 ERALLEEVPGIVEVEQV 77
>gi|322502114|emb|CBZ37197.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 448
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI--ESDSAVVQRIKEV 124
+ DW L+ V ++ +H SG+P + D + E DS VV IKE+
Sbjct: 238 ETDWSELKLHVSALLTDHICSGNPHVDPSA-------PHPHADTVPEEGDSEVVLMIKEL 290
Query: 125 LDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
+ +RP + DGGD+ F G+ G + + + GAC C S+ TL + H++PE
Sbjct: 291 VSTTIRPQLQDDGGDLRFVGFDPVLGDMHVELLGACRTCKSSKTTLVDLIERTTRHWIPE 350
Query: 183 VKDIRTV 189
V ++ V
Sbjct: 351 VSAVKDV 357
>gi|293375093|ref|ZP_06621383.1| NifU-like protein [Turicibacter sanguinis PC909]
gi|325841245|ref|ZP_08167346.1| NifU-like protein [Turicibacter sp. HGF1]
gi|292646287|gb|EFF64307.1| NifU-like protein [Turicibacter sanguinis PC909]
gi|325489926|gb|EGC92273.1| NifU-like protein [Turicibacter sp. HGF1]
Length = 78
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E+L+ ++RP + RDGGD+ + + DGIV++ M GAC GC S TLK G+ IL
Sbjct: 6 KQIVEILE-KLRPYLQRDGGDVEYIKFEDGIVYVRMLGACVGCASMDSTLKDGIEQILLE 64
Query: 179 FVPEVKDIRTV 189
VP V + V
Sbjct: 65 EVPGVIGVENV 75
>gi|71029204|ref|XP_764245.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351199|gb|EAN31962.1| hypothetical protein TP04_0610 [Theileria parva]
Length = 180
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASET 167
+ + D V+ IK ++D R+RP + +DGGD+ F Y G V++ + GAC GC + T
Sbjct: 84 YSDEDIETVESIKILIDKRIRPVIQQDGGDVSFVSYDPSTGYVYVRLSGACVGCIQSDVT 143
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
LK+ + +L H++ E+ + V
Sbjct: 144 LKHMIQGMLCHYLEEITAVYNV 165
>gi|315453542|ref|YP_004073812.1| nifU protein-like protein [Helicobacter felis ATCC 49179]
gi|315132594|emb|CBY83222.1| nifU protein homolog [Helicobacter felis ATCC 49179]
Length = 89
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
I SD + + +++ L+ +VRP + RDGGD+V G ++ V++S+ GAC GC S++ TLK
Sbjct: 1 MIFSDQELQKPVEKALE-KVRPMLLRDGGDVVLLGIKNAKVYVSLEGACKGCASSANTLK 59
Query: 170 YGVANILNH 178
+G+ L
Sbjct: 60 FGIERCLQE 68
>gi|229816700|ref|ZP_04446988.1| hypothetical protein COLINT_03748 [Collinsella intestinalis DSM
13280]
gi|229807752|gb|EEP43566.1| hypothetical protein COLINT_03748 [Collinsella intestinalis DSM
13280]
Length = 98
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+KEVL+ ++RP + DGGD+ + G DG+V L ++GAC+GCP +S TL GV IL
Sbjct: 13 LKEVLE-QIRPNLQADGGDMEYIGVTEDGVVKLELQGACAGCPMSSLTLSMGVERILKEH 71
Query: 180 VPEVKDIRTV 189
VP V + V
Sbjct: 72 VPGVTRVEQV 81
>gi|218192692|gb|EEC75119.1| hypothetical protein OsI_11301 [Oryza sativa Indica Group]
Length = 288
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + + VLD+ VRP + DGGD+ DG++ L + GAC CPS++ T+K G
Sbjct: 72 ETYELTAENVDRVLDD-VRPYLIADGGDVTVASVEDGVISLKLEGACGSCPSSTTTMKMG 130
Query: 172 VANILNH-FVPEVKDIRTV 189
+ +L F VKDIR V
Sbjct: 131 IERVLKEKFGDAVKDIRQV 149
>gi|282875569|ref|ZP_06284440.1| NifU-like protein [Staphylococcus epidermidis SK135]
gi|281295596|gb|EFA88119.1| NifU-like protein [Staphylococcus epidermidis SK135]
Length = 80
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+S + ++ EV++ R+RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 4 ENSTMFDQVAEVIE-RLRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGI 62
Query: 173 ANILNHFVPEVKDIRTV 189
L+ VP V ++ V
Sbjct: 63 ERALHEEVPGVIEVEQV 79
>gi|258516727|ref|YP_003192949.1| nitrogen-fixing NifU domain-containing protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257780432|gb|ACV64326.1| nitrogen-fixing NifU domain protein [Desulfotomaculum acetoxidans
DSM 771]
Length = 73
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILN 177
++++EVL +VRP + RDGGD+ DG+V + ++GACSG P A+ TLK G+ +L
Sbjct: 3 EKVEEVL-GKVRPYLQRDGGDVELVDITPDGVVQVKLKGACSGUPGATITLKQGIERVLK 61
Query: 178 HFVPEVKDI 186
VPEVK +
Sbjct: 62 QEVPEVKGV 70
>gi|295695724|ref|YP_003588962.1| nitrogen-fixing NifU domain protein [Bacillus tusciae DSM 2912]
gi|295411326|gb|ADG05818.1| nitrogen-fixing NifU domain protein [Bacillus tusciae DSM 2912]
Length = 73
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++++E L+ R+RP + DGGD+ DG+V L + GAC CP ++ TLK G+ L
Sbjct: 4 EKVEEALE-RIRPGLQFDGGDVELVDVEDGVVTLHLIGACGACPMSTMTLKMGIERALRA 62
Query: 179 FVPEVKDIRTV 189
VPEVK++ V
Sbjct: 63 AVPEVKEVIAV 73
>gi|15923926|ref|NP_371460.1| hypothetical protein SAV0936 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926525|ref|NP_374058.1| hypothetical protein SA0797 [Staphylococcus aureus subsp. aureus
N315]
gi|21282547|ref|NP_645635.1| hypothetical protein MW0818 [Staphylococcus aureus subsp. aureus
MW2]
gi|49483096|ref|YP_040320.1| hypothetical protein SAR0898 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49485712|ref|YP_042933.1| hypothetical protein SAS0806 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|82750551|ref|YP_416292.1| hypothetical protein SAB0802c [Staphylococcus aureus RF122]
gi|87159950|ref|YP_493539.1| hypothetical protein SAUSA300_0839 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88194630|ref|YP_499426.1| hypothetical protein SAOUHSC_00873 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148267370|ref|YP_001246313.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
JH9]
gi|150393423|ref|YP_001316098.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
JH1]
gi|151221019|ref|YP_001331841.1| hypothetical protein NWMN_0807 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156979262|ref|YP_001441521.1| hypothetical protein SAHV_0931 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161509138|ref|YP_001574797.1| hypothetical protein USA300HOU_0897 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221141927|ref|ZP_03566420.1| hypothetical protein SauraJ_09890 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253316824|ref|ZP_04840037.1| hypothetical protein SauraC_11885 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253731543|ref|ZP_04865708.1| NifU family protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253732709|ref|ZP_04866874.1| NifU family protein [Staphylococcus aureus subsp. aureus TCH130]
gi|255005726|ref|ZP_05144327.2| hypothetical protein SauraM_04635 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257424985|ref|ZP_05601412.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427651|ref|ZP_05604050.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257430286|ref|ZP_05606669.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257432983|ref|ZP_05609343.1| nitrogen fixation protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257435887|ref|ZP_05611935.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|257795329|ref|ZP_05644308.1| nitrogen fixation protein NifU [Staphylococcus aureus A9781]
gi|258406978|ref|ZP_05680131.1| nitrogen fixation protein NifU [Staphylococcus aureus A9763]
gi|258421946|ref|ZP_05684867.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|258424377|ref|ZP_05687257.1| nitrogen fixation protein [Staphylococcus aureus A9635]
gi|258435343|ref|ZP_05689082.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258441555|ref|ZP_05690915.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus A8115]
gi|258447254|ref|ZP_05695403.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|258450014|ref|ZP_05698112.1| nitrogen fixation protein NifU [Staphylococcus aureus A6224]
gi|258452112|ref|ZP_05700128.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|258455527|ref|ZP_05703486.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|262049630|ref|ZP_06022498.1| hypothetical protein SAD30_1213 [Staphylococcus aureus D30]
gi|262052935|ref|ZP_06025116.1| hypothetical protein SA930_0147 [Staphylococcus aureus 930918-3]
gi|269202551|ref|YP_003281820.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
ED98]
gi|282893963|ref|ZP_06302194.1| thioredoxin [Staphylococcus aureus A8117]
gi|282903473|ref|ZP_06311364.1| NifU domain protein [Staphylococcus aureus subsp. aureus C160]
gi|282905251|ref|ZP_06313108.1| thioredoxin-family protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908231|ref|ZP_06316062.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282910512|ref|ZP_06318316.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282913708|ref|ZP_06321497.1| NifU domain protein [Staphylococcus aureus subsp. aureus M899]
gi|282916186|ref|ZP_06323948.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus D139]
gi|282918634|ref|ZP_06326371.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus C427]
gi|282922215|ref|ZP_06329910.1| thioredoxin-like protein [Staphylococcus aureus A9765]
gi|282923624|ref|ZP_06331304.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus C101]
gi|282927159|ref|ZP_06334781.1| thioredoxin-like protein [Staphylococcus aureus A10102]
gi|283770001|ref|ZP_06342893.1| thioredoxin protein [Staphylococcus aureus subsp. aureus H19]
gi|283957674|ref|ZP_06375127.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284023863|ref|ZP_06378261.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
132]
gi|293500750|ref|ZP_06666601.1| thioredoxin protein [Staphylococcus aureus subsp. aureus 58-424]
gi|293509700|ref|ZP_06668411.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus M809]
gi|293524288|ref|ZP_06670975.1| NifU domain protein [Staphylococcus aureus subsp. aureus M1015]
gi|294850211|ref|ZP_06790947.1| thioredoxin-like protein [Staphylococcus aureus A9754]
gi|295405741|ref|ZP_06815550.1| thioredoxin-like protein [Staphylococcus aureus A8819]
gi|295427419|ref|ZP_06820054.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275869|ref|ZP_06858376.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
MR1]
gi|297208429|ref|ZP_06924859.1| NifU domain protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297245332|ref|ZP_06929203.1| hypothetical protein SLAG_01427 [Staphylococcus aureus A8796]
gi|297590221|ref|ZP_06948860.1| NifU domain protein [Staphylococcus aureus subsp. aureus MN8]
gi|300912505|ref|ZP_07129948.1| NifU domain protein [Staphylococcus aureus subsp. aureus TCH70]
gi|304381511|ref|ZP_07364161.1| NifU domain protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|13700740|dbj|BAB42036.1| SA0797 [Staphylococcus aureus subsp. aureus N315]
gi|14246705|dbj|BAB57098.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
Mu50]
gi|21203984|dbj|BAB94683.1| MW0818 [Staphylococcus aureus subsp. aureus MW2]
gi|49241225|emb|CAG39904.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49244155|emb|CAG42581.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|82656082|emb|CAI80490.1| nitrogen fixation protein [Staphylococcus aureus RF122]
gi|87125924|gb|ABD20438.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202188|gb|ABD29998.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147740439|gb|ABQ48737.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus JH9]
gi|149945875|gb|ABR51811.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus JH1]
gi|150373819|dbj|BAF67079.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156721397|dbj|BAF77814.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|160367947|gb|ABX28918.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724786|gb|EES93515.1| NifU family protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253729320|gb|EES98049.1| NifU family protein [Staphylococcus aureus subsp. aureus TCH130]
gi|257272555|gb|EEV04678.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275844|gb|EEV07317.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257279063|gb|EEV09674.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257282398|gb|EEV12533.1| nitrogen fixation protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257285078|gb|EEV15197.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|257789301|gb|EEV27641.1| nitrogen fixation protein NifU [Staphylococcus aureus A9781]
gi|257841517|gb|EEV65958.1| nitrogen fixation protein NifU [Staphylococcus aureus A9763]
gi|257842279|gb|EEV66707.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|257845390|gb|EEV69424.1| nitrogen fixation protein [Staphylococcus aureus A9635]
gi|257849004|gb|EEV72987.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257852345|gb|EEV76271.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus A8115]
gi|257854002|gb|EEV76956.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|257856934|gb|EEV79837.1| nitrogen fixation protein NifU [Staphylococcus aureus A6224]
gi|257860327|gb|EEV83159.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|257862345|gb|EEV85114.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|259159186|gb|EEW44249.1| hypothetical protein SA930_0147 [Staphylococcus aureus 930918-3]
gi|259162272|gb|EEW46846.1| hypothetical protein SAD30_1213 [Staphylococcus aureus D30]
gi|262074841|gb|ACY10814.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
ED98]
gi|269940438|emb|CBI48815.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282314492|gb|EFB44882.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus C101]
gi|282317768|gb|EFB48140.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus C427]
gi|282319626|gb|EFB49974.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus D139]
gi|282322740|gb|EFB53062.1| NifU domain protein [Staphylococcus aureus subsp. aureus M899]
gi|282325904|gb|EFB56212.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282327896|gb|EFB58178.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282331658|gb|EFB61170.1| thioredoxin-family protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282590848|gb|EFB95923.1| thioredoxin-like protein [Staphylococcus aureus A10102]
gi|282593505|gb|EFB98499.1| thioredoxin-like protein [Staphylococcus aureus A9765]
gi|282596428|gb|EFC01389.1| NifU domain protein [Staphylococcus aureus subsp. aureus C160]
gi|282763449|gb|EFC03578.1| thioredoxin [Staphylococcus aureus A8117]
gi|283460148|gb|EFC07238.1| thioredoxin protein [Staphylococcus aureus subsp. aureus H19]
gi|283470135|emb|CAQ49346.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
ST398]
gi|283791125|gb|EFC29940.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285816615|gb|ADC37102.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus
04-02981]
gi|290921251|gb|EFD98312.1| NifU domain protein [Staphylococcus aureus subsp. aureus M1015]
gi|291095755|gb|EFE26016.1| thioredoxin protein [Staphylococcus aureus subsp. aureus 58-424]
gi|291467797|gb|EFF10312.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus M809]
gi|294822985|gb|EFG39418.1| thioredoxin-like protein [Staphylococcus aureus A9754]
gi|294969176|gb|EFG45196.1| thioredoxin-like protein [Staphylococcus aureus A8819]
gi|295128807|gb|EFG58438.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296887168|gb|EFH26071.1| NifU domain protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297177635|gb|EFH36885.1| hypothetical protein SLAG_01427 [Staphylococcus aureus A8796]
gi|297576520|gb|EFH95235.1| NifU domain protein [Staphylococcus aureus subsp. aureus MN8]
gi|298694175|gb|ADI97397.1| nitrogen fixation protein [Staphylococcus aureus subsp. aureus
ED133]
gi|300886751|gb|EFK81953.1| NifU domain protein [Staphylococcus aureus subsp. aureus TCH70]
gi|302332549|gb|ADL22742.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302750764|gb|ADL64941.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304339874|gb|EFM05818.1| NifU domain protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312438702|gb|ADQ77773.1| NifU domain protein [Staphylococcus aureus subsp. aureus TCH60]
gi|312829333|emb|CBX34175.1| nifU-like domain protein [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315130484|gb|EFT86471.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|315194468|gb|EFU24860.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|315197289|gb|EFU27627.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|320141247|gb|EFW33094.1| NifU-like domain protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143019|gb|EFW34810.1| NifU-like domain protein [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323440910|gb|EGA98618.1| NifU domain-containing protein [Staphylococcus aureus O11]
gi|323443798|gb|EGB01410.1| NifU domain-containing protein [Staphylococcus aureus O46]
gi|329313603|gb|AEB88016.1| Nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus T0131]
gi|329726251|gb|EGG62721.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21189]
gi|329728166|gb|EGG64605.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21172]
gi|329733972|gb|EGG70294.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21193]
Length = 80
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
D+ + ++ EV++ R+RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 4 EDTTMFDQVAEVIE-RLRPFLLRDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGI 62
Query: 173 ANILNHFVPEVKDIRTV 189
L+ VP V ++ V
Sbjct: 63 ERALHEEVPGVIEVEQV 79
>gi|189426530|ref|YP_001953707.1| nitrogen-fixing NifU domain protein [Geobacter lovleyi SZ]
gi|189422789|gb|ACD97187.1| nitrogen-fixing NifU domain protein [Geobacter lovleyi SZ]
Length = 74
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
++++++ VLD +VRP + RDGGD+ + + DGIV + ++GAC CP ++ TLK G+
Sbjct: 1 MIEKVQAVLD-QVRPMLQRDGGDVELIEVTADGIVKVKLQGACGSCPMSTMTLKMGIEKA 59
Query: 176 LNHFVPEVKDIRTV 189
+ +PE+ +++ V
Sbjct: 60 IKEQIPEIVEVQQV 73
>gi|222624810|gb|EEE58942.1| hypothetical protein OsJ_10617 [Oryza sativa Japonica Group]
Length = 224
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + + VLD+ VRP + DGGD+ DG++ L + GAC CPS++ T+K G
Sbjct: 72 ETYELTAENVDRVLDD-VRPYLIADGGDVTVASVEDGVISLKLEGACGSCPSSTTTMKMG 130
Query: 172 VANILNH-FVPEVKDIRTV 189
+ +L F VKDIR V
Sbjct: 131 IERVLKEKFGDAVKDIRQV 149
>gi|115452669|ref|NP_001049935.1| Os03g0314700 [Oryza sativa Japonica Group]
gi|108707815|gb|ABF95610.1| NifU-like domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113548406|dbj|BAF11849.1| Os03g0314700 [Oryza sativa Japonica Group]
gi|215697309|dbj|BAG91303.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + + VLD+ VRP + DGGD+ DG++ L + GAC CPS++ T+K G
Sbjct: 72 ETYELTAENVDRVLDD-VRPYLIADGGDVTVASVEDGVISLKLEGACGSCPSSTTTMKMG 130
Query: 172 VANILNH-FVPEVKDIRTV 189
+ +L F VKDIR V
Sbjct: 131 IERVLKEKFGDAVKDIRQV 149
>gi|223984131|ref|ZP_03634283.1| hypothetical protein HOLDEFILI_01575 [Holdemania filiformis DSM
12042]
gi|223963925|gb|EEF68285.1| hypothetical protein HOLDEFILI_01575 [Holdemania filiformis DSM
12042]
Length = 82
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
++K V++ ++RP + RDGGD+ F DGIV + M GACS C S TLK G+ IL
Sbjct: 7 QVKNVIE-KIRPYIQRDGGDVEFVSLEDGIVTVKMLGACSECLSLDATLKDGIEAILLDE 65
Query: 180 VPEVKDIR 187
VP V ++R
Sbjct: 66 VPGVTEVR 73
>gi|332968729|gb|EGK07781.1| NifU domain protein [Desmospora sp. 8437]
Length = 73
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++++EVLD ++RP + RDGGD+ DG+V + + GAC CPS++ TLK G+ L
Sbjct: 3 EQVQEVLD-KLRPFIQRDGGDVELVNVEDGVVKVRLLGACGSCPSSTITLKAGIERALME 61
Query: 179 FVPEVKDIRTV 189
+P V ++ V
Sbjct: 62 EIPGVTEVEQV 72
>gi|229543324|ref|ZP_04432384.1| nitrogen-fixing NifU domain protein [Bacillus coagulans 36D1]
gi|229327744|gb|EEN93419.1| nitrogen-fixing NifU domain protein [Bacillus coagulans 36D1]
Length = 78
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ ++++EVLD ++RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 5 TITEQVQEVLD-KLRPFLLRDGGDCELIDVEDGIVKLRLLGACGSCPSSTITLKAGIERA 63
Query: 176 LNHFVPEVKDIRTV 189
L VP V ++ V
Sbjct: 64 LFEEVPGVMEVEQV 77
>gi|152012745|gb|AAI50438.1| Hirip5 protein [Danio rerio]
Length = 157
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFS---NAKEAEISPLASRIFSIPGIASVYFG 57
MFIQT+DTPNP +LKF+PG+ VL G + F+ +A A+ +P + I +
Sbjct: 51 MFIQTQDTPNPNSLKFLPGRAVLDSGTMDFAGPRDAPRADTAPSEDDDEVVAMIKELLDT 110
Query: 58 YDFITVGKD---QYDWEHLRPPVLGMIMEHFISGDPIIHNG 95
TV +D + +W+ ++P V IM+ F SG P+++
Sbjct: 111 RIRPTVQEDGSGETEWKVIKPDVFATIMDFFTSGLPVVNEA 151
Score = 37.0 bits (84), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 84 HFISGDPIIHNGGLGDMKLDDMGSGDFI--ESDSAVVQRIKEVLDNRVRPAVARDG-GDI 140
F+ G ++ +G + D D E D VV IKE+LD R+RP V DG G+
Sbjct: 65 KFLPGRAVLDSGTMDFAGPRDAPRADTAPSEDDDEVVAMIKELLDTRIRPTVQEDGSGET 124
Query: 141 VFKGYRDGIVFLSMRGACSGCPSASE 166
+K + + M SG P +E
Sbjct: 125 EWKVIKPDVFATIMDFFTSGLPVVNE 150
>gi|313673639|ref|YP_004051750.1| nitrogen-fixing nifu domain protein [Calditerrivibrio nitroreducens
DSM 19672]
gi|312940395|gb|ADR19587.1| nitrogen-fixing NifU domain protein [Calditerrivibrio nitroreducens
DSM 19672]
Length = 75
Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILN 177
+R++EVL +VRPA+ DGGD+ G D G+V + + GAC CP ++ TLK+G+ L
Sbjct: 5 ERVEEVL-KKVRPALQADGGDVELLGVTDDGVVKVQLTGACGSCPFSTMTLKHGIEMRLK 63
Query: 178 HFVPEVKDI 186
+PE+K++
Sbjct: 64 DEIPEIKEV 72
>gi|210630137|ref|ZP_03296252.1| hypothetical protein COLSTE_00136 [Collinsella stercoris DSM 13279]
gi|210160610|gb|EEA91581.1| hypothetical protein COLSTE_00136 [Collinsella stercoris DSM 13279]
Length = 93
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILN 177
Q + EVL+ ++RP + DGGD+ + G D G+V L ++GAC+GCP +S TL G+ IL
Sbjct: 6 QLLLEVLE-QIRPNLQADGGDMAYVGVTDEGVVQLELQGACAGCPMSSLTLSMGIERILK 64
Query: 178 HFVPEVKDIRTV 189
VP V + V
Sbjct: 65 EHVPGVTRVEQV 76
>gi|84997065|ref|XP_953254.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304250|emb|CAI76629.1| hypothetical protein, conserved [Theileria annulata]
Length = 179
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVAN 174
V+ IK ++D R+RP + +DGGD+ F Y G V++ + GAC GC + TLK+ +
Sbjct: 91 TVESIKLLIDKRIRPVIQQDGGDVFFVSYDPSTGYVYVRLSGACVGCIQSDITLKHMIQG 150
Query: 175 ILNHFVPEVKDIRTV 189
+L H++ E+ + V
Sbjct: 151 MLCHYLEEITAVYNV 165
>gi|255536379|ref|YP_003096750.1| Nitrogen-fixing NifU, C-terminal [Flavobacteriaceae bacterium
3519-10]
gi|255342575|gb|ACU08688.1| Nitrogen-fixing NifU, C-terminal [Flavobacteriaceae bacterium
3519-10]
Length = 77
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 128 RVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
++RP + +DGGDI R+ IV++ ++G C+GCP + T+K GV N + PE++++
Sbjct: 15 KIRPFLNKDGGDIELVDVRESIVYVKLQGNCNGCPMSFSTMKLGVENTIKQHAPEIQEVI 74
Query: 188 TV 189
V
Sbjct: 75 NV 76
>gi|322379101|ref|ZP_08053503.1| conserved hypothetical nifU-like protein [Helicobacter suis HS1]
gi|322380564|ref|ZP_08054730.1| NifU-like protein [Helicobacter suis HS5]
gi|321147026|gb|EFX41760.1| NifU-like protein [Helicobacter suis HS5]
gi|321148473|gb|EFX42971.1| conserved hypothetical nifU-like protein [Helicobacter suis HS1]
Length = 89
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD + + ++ L+ ++RP + RDGGD+V G ++ V++S+ GAC GC S++ TLK+G+
Sbjct: 4 SDQELQKPVQRALE-KIRPVLLRDGGDVVLLGIKEAKVYVSLEGACKGCSSSANTLKFGI 62
Query: 173 ANILNH 178
L
Sbjct: 63 ERCLQE 68
>gi|51892183|ref|YP_074874.1| NifU-like nitrogen fixation protein [Symbiobacterium thermophilum
IAM 14863]
gi|51855872|dbj|BAD40030.1| NifU-like nitrogen fixation protein [Symbiobacterium thermophilum
IAM 14863]
Length = 77
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ + +R++ LD +RPA+ DGG++ DG+ + M GAC GCP ++ TLK G+
Sbjct: 2 AEETLFERVERALDL-IRPAIRMDGGEVELVAVEDGVARIRMVGACGGCPMSTMTLKMGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
+ VPE++ + V
Sbjct: 61 ERAVRQQVPEIRAVEAV 77
>gi|126698430|ref|YP_001087327.1| hypothetical protein CD0850 [Clostridium difficile 630]
gi|254974469|ref|ZP_05270941.1| hypothetical protein CdifQC_04113 [Clostridium difficile QCD-66c26]
gi|255091862|ref|ZP_05321340.1| hypothetical protein CdifC_04255 [Clostridium difficile CIP 107932]
gi|255099963|ref|ZP_05328940.1| hypothetical protein CdifQCD-6_04105 [Clostridium difficile
QCD-63q42]
gi|255305852|ref|ZP_05350024.1| hypothetical protein CdifA_04615 [Clostridium difficile ATCC 43255]
gi|255313596|ref|ZP_05355179.1| hypothetical protein CdifQCD-7_04573 [Clostridium difficile
QCD-76w55]
gi|255516280|ref|ZP_05383956.1| hypothetical protein CdifQCD-_04157 [Clostridium difficile
QCD-97b34]
gi|255649377|ref|ZP_05396279.1| hypothetical protein CdifQCD_04212 [Clostridium difficile
QCD-37x79]
gi|255654901|ref|ZP_05400310.1| hypothetical protein CdifQCD-2_04194 [Clostridium difficile
QCD-23m63]
gi|260682549|ref|YP_003213834.1| hypothetical protein CD196_0799 [Clostridium difficile CD196]
gi|260686148|ref|YP_003217281.1| hypothetical protein CDR20291_0780 [Clostridium difficile R20291]
gi|306519465|ref|ZP_07405812.1| hypothetical protein CdifQ_04665 [Clostridium difficile QCD-32g58]
gi|115249867|emb|CAJ67684.1| putative NifU-like protein [Clostridium difficile]
gi|260208712|emb|CBA61527.1| conserved hypothetical protein [Clostridium difficile CD196]
gi|260212164|emb|CBE02822.1| conserved hypothetical protein [Clostridium difficile R20291]
Length = 74
Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++++VL+ +++P + RDGGD+ + +G+V + ++GACSGCP A+ T+K + N+L
Sbjct: 3 EKVEKVLEEKIKPVLQRDGGDVELIDVNENGVVLVRLQGACSGCPGATMTIKAIIENVLV 62
Query: 178 HFVPEVKDI 186
VP V +
Sbjct: 63 SEVPGVTQV 71
>gi|332798963|ref|YP_004460462.1| nitrogen-fixing NifU domain-containing protein [Tepidanaerobacter
sp. Re1]
gi|332696698|gb|AEE91155.1| nitrogen-fixing NifU domain-containing protein [Tepidanaerobacter
sp. Re1]
Length = 74
Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
EV+ N++RP++ DGGD+ + GIV + + GAC GCP A+ TLK G+ L +
Sbjct: 6 EVVLNKIRPSLQADGGDVELVDVDEVAGIVKVRLTGACGGCPFATMTLKNGIEEALKEEI 65
Query: 181 PEVKDIRTV 189
PEVK+++ V
Sbjct: 66 PEVKEVQQV 74
>gi|242308908|ref|ZP_04808063.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239524572|gb|EEQ64438.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 81
Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
F+ SD +++ ++ V++ +VRP + DGG++ +G V++ + GAC GCPS+S+TLK
Sbjct: 2 FVFSDQELLKPVEMVIE-KVRPMLINDGGNVTLLKIENGKVYVRLEGACKGCPSSSQTLK 60
Query: 170 YGVANIL-NHFVPEVKDI 186
+G+ L N P+++ I
Sbjct: 61 FGIERALKNEIHPDIELI 78
>gi|296449646|ref|ZP_06891419.1| NifU family protein [Clostridium difficile NAP08]
gi|296878033|ref|ZP_06902051.1| NifU family protein [Clostridium difficile NAP07]
gi|296261502|gb|EFH08324.1| NifU family protein [Clostridium difficile NAP08]
gi|296430988|gb|EFH16817.1| NifU family protein [Clostridium difficile NAP07]
Length = 95
Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
A+ +++++VL+ +++P + RDGGD+ + +G+V + ++GACSGCP A+ T+K + N
Sbjct: 21 AMREKVEKVLEEKIKPVLQRDGGDVELIDVNENGVVLVRLQGACSGCPGATMTIKAIIEN 80
Query: 175 ILNHFVPEVKDIRTV 189
+L VP V + V
Sbjct: 81 VLVSEVPGVTQVLGV 95
>gi|149183085|ref|ZP_01861537.1| YutI [Bacillus sp. SG-1]
gi|148849214|gb|EDL63412.1| YutI [Bacillus sp. SG-1]
Length = 78
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ +V +++EVLD ++RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 2 TQQELVPQVQEVLD-KLRPFLLRDGGDCELVDIEDGIVKLRLLGACGSCPSSTITLKAGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L VP + ++ V
Sbjct: 61 ERALLEEVPGIVEVEQV 77
>gi|70727016|ref|YP_253930.1| nitrogen fixation protein NifU [Staphylococcus haemolyticus
JCSC1435]
gi|223043066|ref|ZP_03613114.1| nitrogen fixation protein NifU [Staphylococcus capitis SK14]
gi|228474235|ref|ZP_04058970.1| nitrogen fixation protein NifU [Staphylococcus hominis SK119]
gi|239636541|ref|ZP_04677543.1| nitrogen fixation protein NifU [Staphylococcus warneri L37603]
gi|242373103|ref|ZP_04818677.1| nitrogen fixation protein NifU [Staphylococcus epidermidis
M23864:W1]
gi|289551248|ref|YP_003472152.1| nitrogen-fixing NifU domain protein [Staphylococcus lugdunensis
HKU09-01]
gi|314933148|ref|ZP_07840513.1| NifU domain protein [Staphylococcus caprae C87]
gi|314936844|ref|ZP_07844191.1| NifU domain protein [Staphylococcus hominis subsp. hominis C80]
gi|315658750|ref|ZP_07911619.1| NifU domain protein [Staphylococcus lugdunensis M23590]
gi|68447740|dbj|BAE05324.1| nitrogen fixation protein NifU [Staphylococcus haemolyticus
JCSC1435]
gi|222443920|gb|EEE50017.1| nitrogen fixation protein NifU [Staphylococcus capitis SK14]
gi|228271594|gb|EEK12941.1| nitrogen fixation protein NifU [Staphylococcus hominis SK119]
gi|239597896|gb|EEQ80391.1| nitrogen fixation protein NifU [Staphylococcus warneri L37603]
gi|242349257|gb|EES40858.1| nitrogen fixation protein NifU [Staphylococcus epidermidis
M23864:W1]
gi|289180780|gb|ADC88025.1| nitrogen-fixing NifU domain protein [Staphylococcus lugdunensis
HKU09-01]
gi|313653298|gb|EFS17055.1| NifU domain protein [Staphylococcus caprae C87]
gi|313655463|gb|EFS19208.1| NifU domain protein [Staphylococcus hominis subsp. hominis C80]
gi|315496205|gb|EFU84531.1| NifU domain protein [Staphylococcus lugdunensis M23590]
gi|330684919|gb|EGG96601.1| NifU-like protein [Staphylococcus epidermidis VCU121]
Length = 80
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ + ++ EV++ R+RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 4 ENATMFDQVAEVIE-RLRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGI 62
Query: 173 ANILNHFVPEVKDIRTV 189
L+ VP V ++ V
Sbjct: 63 ERALHEEVPGVIEVEQV 79
>gi|297544959|ref|YP_003677261.1| nitrogen-fixing NifU domain-containing protein [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296842734|gb|ADH61250.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 73
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+R++EVL+ +RP++ DGGD+ + +DGIV + + GAC GCP A+ TLK G+ +
Sbjct: 3 ERVEEVLE-LLRPSLQADGGDVELIDVTKDGIVKIRLTGACGGCPFATLTLKEGIERAIK 61
Query: 178 HFVPEVKDI 186
+PEVK++
Sbjct: 62 EEIPEVKEV 70
>gi|152977236|ref|YP_001376753.1| NifU domain-containing protein [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152025988|gb|ABS23758.1| nitrogen-fixing NifU domain protein [Bacillus cytotoxicus NVH
391-98]
Length = 78
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+++ EVLD ++RP + RDGGD+ DGIV L + GAC CPS++ TLK G+ L
Sbjct: 8 EQVLEVLD-KLRPFLLRDGGDVELVDIEDGIVKLRLMGACGSCPSSTITLKAGIERALLE 66
Query: 179 FVPEVKDIRTV 189
VP V ++ V
Sbjct: 67 EVPGVIEVEQV 77
>gi|224126131|ref|XP_002329668.1| predicted protein [Populus trichocarpa]
gi|222870549|gb|EEF07680.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD VRP + RDGG++ +V L ++GAC CPS+S TLK G+ L
Sbjct: 10 ENVEKVLDE-VRPGLMRDGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIETKLRD 68
Query: 179 FVPEVKDIRTV 189
+PE+ D+ +
Sbjct: 69 KIPEIMDVEQI 79
>gi|154148473|ref|YP_001407292.1| NifU family protein [Campylobacter hominis ATCC BAA-381]
gi|153804482|gb|ABS51489.1| NifU family protein [Campylobacter hominis ATCC BAA-381]
Length = 88
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD +++ +++ LD +RP + +DGGD+ G ++ +V++ ++GAC GC ++++TLKYGV
Sbjct: 5 SDDELIEPVQKSLD-LIRPMLQKDGGDLELLGIKNAVVYVRLKGACHGCSASAQTLKYGV 63
Query: 173 ANILN 177
L
Sbjct: 64 ERQLK 68
>gi|52081716|ref|YP_080507.1| hypothetical protein BL02118 [Bacillus licheniformis ATCC 14580]
gi|52787102|ref|YP_092931.1| YutI [Bacillus licheniformis ATCC 14580]
gi|319647633|ref|ZP_08001851.1| nitrogen fixation protein [Bacillus sp. BT1B_CT2]
gi|52004927|gb|AAU24869.1| Conserved protein YutI [Bacillus licheniformis ATCC 14580]
gi|52349604|gb|AAU42238.1| YutI [Bacillus licheniformis ATCC 14580]
gi|317389974|gb|EFV70783.1| nitrogen fixation protein [Bacillus sp. BT1B_CT2]
Length = 79
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++++EVLD ++RP + RDGGD DGIV L + GAC CPS++ TLK G+ L
Sbjct: 9 EQVQEVLD-KLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIERALLE 67
Query: 179 FVPEVKDIRTV 189
VP V ++ V
Sbjct: 68 EVPGVIEVEQV 78
>gi|224126127|ref|XP_002329667.1| predicted protein [Populus trichocarpa]
gi|222870548|gb|EEF07679.1| predicted protein [Populus trichocarpa]
Length = 167
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD VRP + RDGG++ +V L ++GAC CPS+S TLK G+ L
Sbjct: 19 ENVEKVLDE-VRPGLMRDGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIETKLRD 77
Query: 179 FVPEVKDIRTV 189
+PE+ D+ +
Sbjct: 78 KIPEIMDVEQI 88
>gi|58177342|pdb|1XHJ|A Chain A, Solution Structure Of The Staphylococcus Epidermidis
Protein Se0630. Northest Structural Genomics Consortium
Target Ser8
Length = 88
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
++ EV++ R+RP + RDGGD DGIV L + GAC CPS++ TLK G+ L+
Sbjct: 11 QVAEVIE-RLRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEE 69
Query: 180 VPEVKDIRTV 189
VP V ++ V
Sbjct: 70 VPGVIEVEQV 79
>gi|224419202|ref|ZP_03657208.1| hypothetical protein HcanM9_08008 [Helicobacter canadensis MIT
98-5491]
gi|253828131|ref|ZP_04871016.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313142706|ref|ZP_07804899.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253511537|gb|EES90196.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313131737|gb|EFR49354.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 81
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD +++ ++ V+D +VRP + DGG++ +G V++ + GAC GCPS+S+TLK+G+
Sbjct: 5 SDQKLLKPVEIVID-KVRPMLINDGGNVTLLKIENGKVYVRLEGACKGCPSSSKTLKFGI 63
Query: 173 ANIL-NHFVPEVKDI 186
+ L N P+++ I
Sbjct: 64 ESALKNEIHPDIELI 78
>gi|154343762|ref|XP_001567825.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134065159|emb|CAM40585.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 431
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 69 DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES-DSAVVQRIKEVLDN 127
DW L+ V ++ +H SG+P + D + + E+ DS +V IKE++
Sbjct: 223 DWSELKFHVSALLTDHICSGNPHV------DPNAPNPHADTVAEAGDSEIVLMIKELVAT 276
Query: 128 RVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
+RP + DGGD+ F G+ G + + + GAC C ++ L + H++PEVK
Sbjct: 277 TIRPQLQEDGGDLRFVGFDPVLGDMRVELLGACRTCKNSKTALVDLIERTTRHWIPEVKA 336
Query: 186 IRTV 189
++ V
Sbjct: 337 VKEV 340
>gi|118487917|gb|ABK95780.1| unknown [Populus trichocarpa]
Length = 224
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD VRP + RDGG++ +V L ++GAC CPS+S TLK G+ L
Sbjct: 76 ENVEKVLDE-VRPGLMRDGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIETKLRD 134
Query: 179 FVPEVKDIRTV 189
+PE+ D+ +
Sbjct: 135 KIPEIMDVEQI 145
>gi|27467548|ref|NP_764185.1| nitrogen fixation protein NifU [Staphylococcus epidermidis ATCC
12228]
gi|57866465|ref|YP_188114.1| NifU domain-containing protein [Staphylococcus epidermidis RP62A]
gi|242242226|ref|ZP_04796671.1| NifU family protein [Staphylococcus epidermidis W23144]
gi|251810309|ref|ZP_04824782.1| NifU family protein [Staphylococcus epidermidis BCM-HMP0060]
gi|293368312|ref|ZP_06614940.1| NifU domain protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|27315092|gb|AAO04227.1|AE016746_17 nitrogen fixation protein NifU [Staphylococcus epidermidis ATCC
12228]
gi|57637123|gb|AAW53911.1| NifU domain protein [Staphylococcus epidermidis RP62A]
gi|242234321|gb|EES36633.1| NifU family protein [Staphylococcus epidermidis W23144]
gi|251806191|gb|EES58848.1| NifU family protein [Staphylococcus epidermidis BCM-HMP0060]
gi|291317559|gb|EFE57977.1| NifU domain protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|319401786|gb|EFV89994.1| nifU-like domain protein [Staphylococcus epidermidis FRI909]
gi|329726827|gb|EGG63287.1| NifU-like protein [Staphylococcus epidermidis VCU144]
gi|329736812|gb|EGG73077.1| NifU-like protein [Staphylococcus epidermidis VCU028]
gi|329737604|gb|EGG73850.1| NifU-like protein [Staphylococcus epidermidis VCU045]
Length = 80
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
++ EV++ R+RP + RDGGD DGIV L + GAC CPS++ TLK G+ L+
Sbjct: 11 QVAEVIE-RLRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEE 69
Query: 180 VPEVKDIRTV 189
VP V ++ V
Sbjct: 70 VPGVIEVEQV 79
>gi|164688813|ref|ZP_02212841.1| hypothetical protein CLOBAR_02460 [Clostridium bartlettii DSM
16795]
gi|164602289|gb|EDQ95754.1| hypothetical protein CLOBAR_02460 [Clostridium bartlettii DSM
16795]
Length = 73
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++ VLD +VRP + RDGGD+ + + DG+V + ++GACSGCP A+ TLK + N+L
Sbjct: 3 EQVAAVLD-KVRPVLQRDGGDVELVEVSDDGVVLVRLKGACSGCPGATMTLKAVIENLLV 61
Query: 178 HFVPEVKDI 186
VP V +
Sbjct: 62 KEVPGVTRV 70
>gi|156088839|ref|XP_001611826.1| NifU-like domain containing protein [Babesia bovis]
gi|154799080|gb|EDO08258.1| NifU-like domain containing protein [Babesia bovis]
Length = 123
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASET 167
+ E+D VV IK ++D R+ P V +DGGD+ F Y G V++ + GAC GC + T
Sbjct: 26 YSEADLEVVDSIKLLIDKRIAPVVRQDGGDVSFISYDPETGFVYVRLSGACVGCAQSDIT 85
Query: 168 LKYGVANILNHFVPEV 183
LK+ + L H++ +V
Sbjct: 86 LKHMIQGTLCHYLDDV 101
>gi|167465184|ref|ZP_02330273.1| nitrogen-fixing NifU domain protein [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322384547|ref|ZP_08058227.1| iron-sulfur scaffold-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321150602|gb|EFX44079.1| iron-sulfur scaffold-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 82
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
DS + + EVLD ++RP + RDGGD+ DGIV L + GAC CPS++ TLK G+
Sbjct: 6 QDSTMYDEVLEVLD-KLRPFLQRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGI 64
Query: 173 ANILNHFVPEVKDIRTV 189
L V EV+ I+ V
Sbjct: 65 ERAL---VEEVEGIQEV 78
>gi|152993863|ref|YP_001359584.1| hypothetical protein SUN_2287 [Sulfurovum sp. NBC37-1]
gi|151425724|dbj|BAF73227.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 92
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+D + +K+V++ +VRP++ DGGDI +DG+V++ ++GAC GC SA T+K+GV
Sbjct: 5 TDEELEPAVKDVIE-KVRPSIKLDGGDIELVDIKDGVVYVQLQGACVGCGSAGTTIKFGV 63
Query: 173 ANILNHFV-PEV 183
L + PE+
Sbjct: 64 ERQLKTLIHPEI 75
>gi|297583473|ref|YP_003699253.1| nitrogen-fixing NifU domain-containing protein [Bacillus
selenitireducens MLS10]
gi|297141930|gb|ADH98687.1| nitrogen-fixing NifU domain protein [Bacillus selenitireducens
MLS10]
Length = 78
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+++EVLD ++RP + RDGGD+ DG+V + + GAC CPS++ TLK G+ L
Sbjct: 9 QVQEVLD-KLRPFLLRDGGDVELVDVEDGVVKVRLMGACGSCPSSTITLKAGIERALLEE 67
Query: 180 VPEVKDIRTV 189
VP V ++ V
Sbjct: 68 VPGVTELEQV 77
>gi|298528227|ref|ZP_07015631.1| nitrogen-fixing NifU domain protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511879|gb|EFI35781.1| nitrogen-fixing NifU domain protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 73
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++++EVL+ ++RP++ DGGD+ + + D +V + ++GAC GCP + TLK G+ ++
Sbjct: 3 EQVQEVLE-KIRPSLQADGGDVELVEVTEDNVVKVQLQGACKGCPMSQMTLKNGIERLIM 61
Query: 178 HFVPEVKDIRTV 189
+P++K + +V
Sbjct: 62 QELPQIKSVESV 73
>gi|20808161|ref|NP_623332.1| thioredoxin domain-containing protein [Thermoanaerobacter
tengcongensis MB4]
gi|20516751|gb|AAM24936.1| Thioredoxin-like proteins and domains [Thermoanaerobacter
tengcongensis MB4]
Length = 73
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+R++E+L N ++P++ DGGD+ + DG+V + + GAC GCP A+ TLK G+ +
Sbjct: 3 ERVEEIL-NLIKPSLQADGGDVELVDVTEDGVVKVKLTGACGGCPFATLTLKEGIERAIK 61
Query: 178 HFVPEVKDIRTV 189
+PEVK++ V
Sbjct: 62 EEIPEVKEVIAV 73
>gi|162448199|ref|YP_001621331.1| NifU-like domain-containing protein [Acholeplasma laidlawii PG-8A]
gi|161986306|gb|ABX81955.1| NifU-like domain protein [Acholeplasma laidlawii PG-8A]
Length = 77
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%)
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
RVRP + RDGGDI DGIV++ M GAC GC + TLK G+ ++ VP + +
Sbjct: 15 KRVRPYIQRDGGDIELVNIEDGIVYVKMGGACDGCAAIDITLKQGIETMMLENVPGIIAV 74
Query: 187 RTV 189
TV
Sbjct: 75 VTV 77
>gi|311031755|ref|ZP_07709845.1| NifU-like protein [Bacillus sp. m3-13]
Length = 78
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
S+ + +++EVLD ++RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 2 SNPEINAQVQEVLD-KLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L VP + ++ V
Sbjct: 61 ERALLEEVPGIIEVEQV 77
>gi|126652035|ref|ZP_01724224.1| nitrogen fixation protein (NifU protein) [Bacillus sp. B14905]
gi|169826170|ref|YP_001696328.1| NifU-like protein [Lysinibacillus sphaericus C3-41]
gi|299536342|ref|ZP_07049655.1| NifU-like protein [Lysinibacillus fusiformis ZC1]
gi|126591125|gb|EAZ85235.1| nitrogen fixation protein (NifU protein) [Bacillus sp. B14905]
gi|168990658|gb|ACA38198.1| NifU-like protein [Lysinibacillus sphaericus C3-41]
gi|298728328|gb|EFI68890.1| NifU-like protein [Lysinibacillus fusiformis ZC1]
Length = 78
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+++ + +++EVLD ++RP + RDGGD DG+V L + GAC CPS++ TLK G+
Sbjct: 2 AEATINDQVQEVLD-KLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L VP + ++ V
Sbjct: 61 ERALLEEVPGIVEVEQV 77
>gi|261409236|ref|YP_003245477.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|315649387|ref|ZP_07902475.1| nitrogen-fixing NifU domain protein [Paenibacillus vortex V453]
gi|329926903|ref|ZP_08281306.1| NifU-like protein [Paenibacillus sp. HGF5]
gi|261285699|gb|ACX67670.1| nitrogen-fixing NifU domain protein [Paenibacillus sp. Y412MC10]
gi|315275163|gb|EFU38533.1| nitrogen-fixing NifU domain protein [Paenibacillus vortex V453]
gi|328938890|gb|EGG35263.1| NifU-like protein [Paenibacillus sp. HGF5]
Length = 81
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + V + EVLD ++RP + RDGGD+ DGIV L + GAC CPS++ TLK G+
Sbjct: 5 TQTTVYDEVAEVLD-KLRPFLQRDGGDVELVDVEDGIVKLKLMGACGSCPSSTITLKAGI 63
Query: 173 ANILNHFVPEVKDIRTV 189
L V EV+ I+ V
Sbjct: 64 ERAL---VEEVEGIQEV 77
>gi|328954876|ref|YP_004372209.1| nitrogen-fixing NifU domain protein [Coriobacterium glomerans PW2]
gi|328455200|gb|AEB06394.1| nitrogen-fixing NifU domain protein [Coriobacterium glomerans PW2]
Length = 92
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILN 177
+ +K VLD +RP + DGGD+ F G D G+V L ++GAC+GCP +S TL G+ +L
Sbjct: 6 EHLKRVLD-EIRPNLQADGGDLTFVGVDDDGVVQLELQGACAGCPMSSMTLSMGIERVLK 64
Query: 178 HFVPEVKDIRTV 189
V V + V
Sbjct: 65 EHVAGVTRVEAV 76
>gi|289578725|ref|YP_003477352.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter italicus
Ab9]
gi|289528438|gb|ADD02790.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter italicus
Ab9]
Length = 73
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+R++EVL+ +RP++ DGGD+ + DGIV + + GAC GCP A+ TLK G+ +
Sbjct: 3 KRVEEVLE-LLRPSLQADGGDVELIDVTEDGIVKIRLTGACGGCPFATLTLKEGIERAIK 61
Query: 178 HFVPEVKDI 186
+PEVK++
Sbjct: 62 EEIPEVKEV 70
>gi|167037171|ref|YP_001664749.1| NifU domain-containing protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|167040690|ref|YP_001663675.1| NifU domain-containing protein [Thermoanaerobacter sp. X514]
gi|256751269|ref|ZP_05492149.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914731|ref|ZP_07132047.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter sp. X561]
gi|307724035|ref|YP_003903786.1| nitrogen-fixing NifU domain-containing protein [Thermoanaerobacter
sp. X513]
gi|320115589|ref|YP_004185748.1| nitrogen-fixing NifU domain-containing protein [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|166854930|gb|ABY93339.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter sp. X514]
gi|166856005|gb|ABY94413.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256749824|gb|EEU62848.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889666|gb|EFK84812.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter sp. X561]
gi|307581096|gb|ADN54495.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter sp. X513]
gi|319928680|gb|ADV79365.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 73
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+R++EVL+ +RP++ DGGD+ + DGIV + + GAC GCP A+ TLK G+ +
Sbjct: 3 ERVEEVLE-LLRPSLQADGGDVELIDVTEDGIVKVRLTGACGGCPFATLTLKEGIERAIK 61
Query: 178 HFVPEVKDI 186
+PEVK++
Sbjct: 62 EEIPEVKEV 70
>gi|218961333|ref|YP_001741108.1| NifU-like domain protein [Candidatus Cloacamonas acidaminovorans]
gi|167729990|emb|CAO80902.1| NifU-like domain protein [Candidatus Cloacamonas acidaminovorans]
Length = 75
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILN 177
++I+ +L +VRP++ DGGD+ R D ++ + ++G C+GCP A+ TLK G+ ++
Sbjct: 5 EKIESIL-AKVRPSIQADGGDVELINIREDNVIEVRLKGTCNGCPMATLTLKAGIERLIK 63
Query: 178 HFVPEVKDI 186
+PEVK++
Sbjct: 64 EEIPEVKEV 72
>gi|326494232|dbj|BAJ90385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 224
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH-F 179
+ VLD+ VRP + DGGD+ DG+V L + GACS CPS++ T+ G+ +L F
Sbjct: 81 VDRVLDD-VRPYLISDGGDVAVVSVEDGVVSLRLEGACSSCPSSTTTMNMGIERVLKEKF 139
Query: 180 VPEVKDIRTV 189
+KDIR V
Sbjct: 140 GDAIKDIRQV 149
>gi|289523173|ref|ZP_06440027.1| NifU domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503716|gb|EFD24880.1| NifU domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 89
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG--IVFLSMRGACSGCPSASETLKYGV 172
+ V + I +V++ +RPA+ GGDI F GY + V + + GAC GCP A ETL++ V
Sbjct: 11 TQVQKDITDVIEKDIRPALVSHGGDIEFVGYDEAEKKVMVRLTGACGGCPFARETLRFQV 70
Query: 173 ANILNHFVPEV 183
N+L +P++
Sbjct: 71 ENVLKDRLPDI 81
>gi|229916513|ref|YP_002885159.1| nitrogen-fixing NifU domain protein [Exiguobacterium sp. AT1b]
gi|229467942|gb|ACQ69714.1| nitrogen-fixing NifU domain protein [Exiguobacterium sp. AT1b]
Length = 75
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+++EVLD ++RP + RDGGD+ +GIV L + GAC CPS++ TLK G+ L
Sbjct: 6 QVQEVLD-KLRPFLLRDGGDVELVDVEEGIVKLRLMGACGSCPSSTITLKAGIERALIEE 64
Query: 180 VPEVKDIRTV 189
VP + ++ V
Sbjct: 65 VPGIVEVEQV 74
>gi|23099811|ref|NP_693277.1| nitrogen fixation protein [Oceanobacillus iheyensis HTE831]
gi|22778042|dbj|BAC14312.1| nitrogen fixation protein (NifU protein) [Oceanobacillus iheyensis
HTE831]
Length = 74
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++++EVL N++RP + RDGGD+ + +G+V L + GAC CPS++ TLK G+ L
Sbjct: 3 EQVQEVL-NKLRPFLLRDGGDVELIDVDEEGVVLLRLMGACGNCPSSTITLKAGIERALM 61
Query: 178 HFVPEVKDIRTV 189
VP V++I V
Sbjct: 62 AEVPGVREIEQV 73
>gi|254458634|ref|ZP_05072058.1| NifU family protein [Campylobacterales bacterium GD 1]
gi|207084400|gb|EDZ61688.1| NifU family protein [Campylobacterales bacterium GD 1]
Length = 91
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+V N++RP++A DGGDI F ++G V++ ++GAC GC S+ TLKYGV
Sbjct: 14 QVAINKIRPSLALDGGDIDFITVKNGNVYVQLKGACIGCASSGSTLKYGV 63
>gi|228993673|ref|ZP_04153580.1| hypothetical protein bpmyx0001_43990 [Bacillus pseudomycoides DSM
12442]
gi|228999709|ref|ZP_04159285.1| hypothetical protein bmyco0003_42630 [Bacillus mycoides Rock3-17]
gi|229007266|ref|ZP_04164867.1| hypothetical protein bmyco0002_41480 [Bacillus mycoides Rock1-4]
gi|229087461|ref|ZP_04219595.1| hypothetical protein bcere0022_40270 [Bacillus cereus Rock3-44]
gi|228695883|gb|EEL48734.1| hypothetical protein bcere0022_40270 [Bacillus cereus Rock3-44]
gi|228754020|gb|EEM03457.1| hypothetical protein bmyco0002_41480 [Bacillus mycoides Rock1-4]
gi|228760071|gb|EEM09041.1| hypothetical protein bmyco0003_42630 [Bacillus mycoides Rock3-17]
gi|228766102|gb|EEM14749.1| hypothetical protein bpmyx0001_43990 [Bacillus pseudomycoides DSM
12442]
Length = 78
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+++ EVLD ++RP + RDGGD+ +GIV L + GAC CPS++ TLK G+ L
Sbjct: 8 EQVLEVLD-KLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGIERALLE 66
Query: 179 FVPEVKDIRTV 189
VP V ++ V
Sbjct: 67 EVPGVIEVEQV 77
>gi|229032593|ref|ZP_04188558.1| hypothetical protein bcere0028_46300 [Bacillus cereus AH1271]
gi|229135778|ref|ZP_04264548.1| hypothetical protein bcere0014_46610 [Bacillus cereus BDRD-ST196]
gi|228647644|gb|EEL03709.1| hypothetical protein bcere0014_46610 [Bacillus cereus BDRD-ST196]
gi|228728778|gb|EEL79789.1| hypothetical protein bcere0028_46300 [Bacillus cereus AH1271]
Length = 78
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+++ EVLD ++RP + RDGGD+ +GIV L + GAC CPS++ TLK G+ L
Sbjct: 8 EQVLEVLD-KLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGIERALLE 66
Query: 179 FVPEVKDIRTV 189
VP V ++ V
Sbjct: 67 EVPGVIEVEQV 77
>gi|57651628|ref|YP_185809.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
COL]
gi|57285814|gb|AAW37908.1| NifU domain protein [Staphylococcus aureus subsp. aureus COL]
Length = 73
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
++ EV++ R+RP + RDGGD DGIV L + GAC CPS++ TLK G+ L+
Sbjct: 4 QVAEVIE-RLRPFLLRDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEE 62
Query: 180 VPEVKDIRTV 189
VP V ++ V
Sbjct: 63 VPGVIEVEQV 72
>gi|30022992|ref|NP_834623.1| NifU protein [Bacillus cereus ATCC 14579]
gi|30264992|ref|NP_847369.1| NifU domain-containing protein [Bacillus anthracis str. Ames]
gi|42784132|ref|NP_981379.1| NifU domain-containing protein [Bacillus cereus ATCC 10987]
gi|47530492|ref|YP_021841.1| NifU domain-containing protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|47566983|ref|ZP_00237700.1| NifU protein-related protein [Bacillus cereus G9241]
gi|49187811|ref|YP_031064.1| NifU domain-containing protein [Bacillus anthracis str. Sterne]
gi|49481022|ref|YP_038969.1| NifU domain-containing protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52140580|ref|YP_086250.1| NifU domain-containing protein [Bacillus cereus E33L]
gi|75758910|ref|ZP_00739021.1| NifU protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|118480036|ref|YP_897187.1| NifU-like domain-containing protein [Bacillus thuringiensis str. Al
Hakam]
gi|163942665|ref|YP_001647549.1| NifU domain-containing protein [Bacillus weihenstephanensis KBAB4]
gi|165870953|ref|ZP_02215605.1| nifU domain protein [Bacillus anthracis str. A0488]
gi|167634861|ref|ZP_02393179.1| nifU domain protein [Bacillus anthracis str. A0442]
gi|167639907|ref|ZP_02398175.1| nifU domain protein [Bacillus anthracis str. A0193]
gi|170685656|ref|ZP_02876879.1| nifU domain protein [Bacillus anthracis str. A0465]
gi|170706993|ref|ZP_02897450.1| nifU domain protein [Bacillus anthracis str. A0389]
gi|177652329|ref|ZP_02934832.1| nifU domain protein [Bacillus anthracis str. A0174]
gi|190567150|ref|ZP_03020065.1| nifU domain protein [Bacillus anthracis Tsiankovskii-I]
gi|196033148|ref|ZP_03100561.1| nifU domain protein [Bacillus cereus W]
gi|196040592|ref|ZP_03107892.1| nifU domain protein [Bacillus cereus NVH0597-99]
gi|196043939|ref|ZP_03111176.1| nifU domain protein [Bacillus cereus 03BB108]
gi|206970391|ref|ZP_03231344.1| nifU domain protein [Bacillus cereus AH1134]
gi|206976476|ref|ZP_03237383.1| nifU domain protein [Bacillus cereus H3081.97]
gi|217962417|ref|YP_002340989.1| nifU domain protein [Bacillus cereus AH187]
gi|218235090|ref|YP_002369752.1| nifU domain protein [Bacillus cereus B4264]
gi|218900105|ref|YP_002448516.1| nifU domain protein [Bacillus cereus G9842]
gi|218906144|ref|YP_002453978.1| nifU domain protein [Bacillus cereus AH820]
gi|222098402|ref|YP_002532460.1| nitrogen-fixing nifu domain protein [Bacillus cereus Q1]
gi|225866921|ref|YP_002752299.1| nifU domain protein [Bacillus cereus 03BB102]
gi|227817723|ref|YP_002817732.1| nifU domain protein [Bacillus anthracis str. CDC 684]
gi|228903455|ref|ZP_04067581.1| hypothetical protein bthur0014_46170 [Bacillus thuringiensis IBL
4222]
gi|228910790|ref|ZP_04074599.1| hypothetical protein bthur0013_49320 [Bacillus thuringiensis IBL
200]
gi|228917578|ref|ZP_04081122.1| hypothetical protein bthur0012_47840 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228923687|ref|ZP_04086965.1| hypothetical protein bthur0011_46620 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228929976|ref|ZP_04092987.1| hypothetical protein bthur0010_46580 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228936248|ref|ZP_04099047.1| hypothetical protein bthur0009_46860 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228942118|ref|ZP_04104658.1| hypothetical protein bthur0008_47490 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228948675|ref|ZP_04110953.1| hypothetical protein bthur0007_47990 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228955216|ref|ZP_04117224.1| hypothetical protein bthur0006_45740 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228961200|ref|ZP_04122821.1| hypothetical protein bthur0005_46480 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228968061|ref|ZP_04129067.1| hypothetical protein bthur0004_48450 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228975048|ref|ZP_04135607.1| hypothetical protein bthur0003_47960 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981687|ref|ZP_04141982.1| hypothetical protein bthur0002_48460 [Bacillus thuringiensis Bt407]
gi|228988194|ref|ZP_04148291.1| hypothetical protein bthur0001_48520 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229014137|ref|ZP_04171258.1| hypothetical protein bmyco0001_45420 [Bacillus mycoides DSM 2048]
gi|229020189|ref|ZP_04176962.1| hypothetical protein bcere0030_46810 [Bacillus cereus AH1273]
gi|229026415|ref|ZP_04182772.1| hypothetical protein bcere0029_46920 [Bacillus cereus AH1272]
gi|229049643|ref|ZP_04194200.1| hypothetical protein bcere0027_46010 [Bacillus cereus AH676]
gi|229062619|ref|ZP_04199928.1| hypothetical protein bcere0026_46850 [Bacillus cereus AH603]
gi|229072441|ref|ZP_04205643.1| hypothetical protein bcere0025_46020 [Bacillus cereus F65185]
gi|229076327|ref|ZP_04209292.1| hypothetical protein bcere0024_46310 [Bacillus cereus Rock4-18]
gi|229082198|ref|ZP_04214662.1| hypothetical protein bcere0023_48160 [Bacillus cereus Rock4-2]
gi|229094055|ref|ZP_04225139.1| hypothetical protein bcere0021_47700 [Bacillus cereus Rock3-42]
gi|229099409|ref|ZP_04230339.1| hypothetical protein bcere0020_46280 [Bacillus cereus Rock3-29]
gi|229105568|ref|ZP_04236202.1| hypothetical protein bcere0019_46970 [Bacillus cereus Rock3-28]
gi|229112395|ref|ZP_04241933.1| hypothetical protein bcere0018_46350 [Bacillus cereus Rock1-15]
gi|229118422|ref|ZP_04247776.1| hypothetical protein bcere0017_46890 [Bacillus cereus Rock1-3]
gi|229124488|ref|ZP_04253673.1| hypothetical protein bcere0016_47720 [Bacillus cereus 95/8201]
gi|229130213|ref|ZP_04259172.1| hypothetical protein bcere0015_46490 [Bacillus cereus BDRD-Cer4]
gi|229141670|ref|ZP_04270200.1| hypothetical protein bcere0013_47600 [Bacillus cereus BDRD-ST26]
gi|229147497|ref|ZP_04275844.1| hypothetical protein bcere0012_46260 [Bacillus cereus BDRD-ST24]
gi|229153141|ref|ZP_04281320.1| hypothetical protein bcere0011_46710 [Bacillus cereus m1550]
gi|229158547|ref|ZP_04286606.1| hypothetical protein bcere0010_47200 [Bacillus cereus ATCC 4342]
gi|229163931|ref|ZP_04291871.1| hypothetical protein bcere0009_46940 [Bacillus cereus R309803]
gi|229169674|ref|ZP_04297374.1| hypothetical protein bcere0007_46180 [Bacillus cereus AH621]
gi|229175651|ref|ZP_04303159.1| hypothetical protein bcere0006_47280 [Bacillus cereus MM3]
gi|229181250|ref|ZP_04308580.1| hypothetical protein bcere0005_45920 [Bacillus cereus 172560W]
gi|229187187|ref|ZP_04314332.1| hypothetical protein bcere0004_47230 [Bacillus cereus BGSC 6E1]
gi|229193231|ref|ZP_04320182.1| hypothetical protein bcere0002_48780 [Bacillus cereus ATCC 10876]
gi|229199099|ref|ZP_04325782.1| hypothetical protein bcere0001_46120 [Bacillus cereus m1293]
gi|229604077|ref|YP_002869195.1| nifU domain protein [Bacillus anthracis str. A0248]
gi|254687285|ref|ZP_05151142.1| nifU domain protein [Bacillus anthracis str. CNEVA-9066]
gi|254725297|ref|ZP_05187080.1| nifU domain protein [Bacillus anthracis str. A1055]
gi|254735378|ref|ZP_05193086.1| nifU domain protein [Bacillus anthracis str. Western North America
USA6153]
gi|254740645|ref|ZP_05198336.1| nifU domain protein [Bacillus anthracis str. Kruger B]
gi|254753093|ref|ZP_05205129.1| nifU domain protein [Bacillus anthracis str. Vollum]
gi|254761435|ref|ZP_05213456.1| nifU domain protein [Bacillus anthracis str. Australia 94]
gi|296505392|ref|YP_003667092.1| NifU protein [Bacillus thuringiensis BMB171]
gi|301056437|ref|YP_003794648.1| nitrogen-fixing NifU domain-containing protein [Bacillus anthracis
CI]
gi|29898552|gb|AAP11824.1| NifU protein [Bacillus cereus ATCC 14579]
gi|30259669|gb|AAP28855.1| nifU domain protein [Bacillus anthracis str. Ames]
gi|42740063|gb|AAS43987.1| nifU domain protein [Bacillus cereus ATCC 10987]
gi|47505640|gb|AAT34316.1| nifU domain protein [Bacillus anthracis str. 'Ames Ancestor']
gi|47556301|gb|EAL14635.1| NifU protein-related protein [Bacillus cereus G9241]
gi|49181738|gb|AAT57114.1| nifU domain protein [Bacillus anthracis str. Sterne]
gi|49332578|gb|AAT63224.1| nitrogen-fixing NifU domain protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51974049|gb|AAU15599.1| nitrogen-fixing NifU domain protein [Bacillus cereus E33L]
gi|74493584|gb|EAO56689.1| NifU protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|118419261|gb|ABK87680.1| NifU-like domain protein [Bacillus thuringiensis str. Al Hakam]
gi|163864862|gb|ABY45921.1| nitrogen-fixing NifU domain protein [Bacillus weihenstephanensis
KBAB4]
gi|164713462|gb|EDR18987.1| nifU domain protein [Bacillus anthracis str. A0488]
gi|167511988|gb|EDR87366.1| nifU domain protein [Bacillus anthracis str. A0193]
gi|167529611|gb|EDR92360.1| nifU domain protein [Bacillus anthracis str. A0442]
gi|170128096|gb|EDS96966.1| nifU domain protein [Bacillus anthracis str. A0389]
gi|170670120|gb|EDT20860.1| nifU domain protein [Bacillus anthracis str. A0465]
gi|172082335|gb|EDT67401.1| nifU domain protein [Bacillus anthracis str. A0174]
gi|190561654|gb|EDV15624.1| nifU domain protein [Bacillus anthracis Tsiankovskii-I]
gi|195994577|gb|EDX58532.1| nifU domain protein [Bacillus cereus W]
gi|196025275|gb|EDX63945.1| nifU domain protein [Bacillus cereus 03BB108]
gi|196028724|gb|EDX67331.1| nifU domain protein [Bacillus cereus NVH0597-99]
gi|206734968|gb|EDZ52137.1| nifU domain protein [Bacillus cereus AH1134]
gi|206745400|gb|EDZ56800.1| nifU domain protein [Bacillus cereus H3081.97]
gi|217063374|gb|ACJ77624.1| nifU domain protein [Bacillus cereus AH187]
gi|218163047|gb|ACK63039.1| nifU domain protein [Bacillus cereus B4264]
gi|218538404|gb|ACK90802.1| nifU domain protein [Bacillus cereus AH820]
gi|218541315|gb|ACK93709.1| nifU domain protein [Bacillus cereus G9842]
gi|221242461|gb|ACM15171.1| nitrogen-fixing NifU domain protein [Bacillus cereus Q1]
gi|225790034|gb|ACO30251.1| nifU domain protein [Bacillus cereus 03BB102]
gi|227002453|gb|ACP12196.1| nifU domain protein [Bacillus anthracis str. CDC 684]
gi|228584370|gb|EEK42505.1| hypothetical protein bcere0001_46120 [Bacillus cereus m1293]
gi|228590208|gb|EEK48076.1| hypothetical protein bcere0002_48780 [Bacillus cereus ATCC 10876]
gi|228596197|gb|EEK53872.1| hypothetical protein bcere0004_47230 [Bacillus cereus BGSC 6E1]
gi|228602143|gb|EEK59634.1| hypothetical protein bcere0005_45920 [Bacillus cereus 172560W]
gi|228607792|gb|EEK65106.1| hypothetical protein bcere0006_47280 [Bacillus cereus MM3]
gi|228613713|gb|EEK70838.1| hypothetical protein bcere0007_46180 [Bacillus cereus AH621]
gi|228619552|gb|EEK76438.1| hypothetical protein bcere0009_46940 [Bacillus cereus R309803]
gi|228624861|gb|EEK81629.1| hypothetical protein bcere0010_47200 [Bacillus cereus ATCC 4342]
gi|228630240|gb|EEK86890.1| hypothetical protein bcere0011_46710 [Bacillus cereus m1550]
gi|228635923|gb|EEK92406.1| hypothetical protein bcere0012_46260 [Bacillus cereus BDRD-ST24]
gi|228641738|gb|EEK98039.1| hypothetical protein bcere0013_47600 [Bacillus cereus BDRD-ST26]
gi|228653146|gb|EEL09025.1| hypothetical protein bcere0015_46490 [Bacillus cereus BDRD-Cer4]
gi|228658828|gb|EEL14483.1| hypothetical protein bcere0016_47720 [Bacillus cereus 95/8201]
gi|228664992|gb|EEL20480.1| hypothetical protein bcere0017_46890 [Bacillus cereus Rock1-3]
gi|228671043|gb|EEL26349.1| hypothetical protein bcere0018_46350 [Bacillus cereus Rock1-15]
gi|228677838|gb|EEL32081.1| hypothetical protein bcere0019_46970 [Bacillus cereus Rock3-28]
gi|228684033|gb|EEL37981.1| hypothetical protein bcere0020_46280 [Bacillus cereus Rock3-29]
gi|228689267|gb|EEL43086.1| hypothetical protein bcere0021_47700 [Bacillus cereus Rock3-42]
gi|228701116|gb|EEL53638.1| hypothetical protein bcere0023_48160 [Bacillus cereus Rock4-2]
gi|228706762|gb|EEL58970.1| hypothetical protein bcere0024_46310 [Bacillus cereus Rock4-18]
gi|228710417|gb|EEL62390.1| hypothetical protein bcere0025_46020 [Bacillus cereus F65185]
gi|228716589|gb|EEL68286.1| hypothetical protein bcere0026_46850 [Bacillus cereus AH603]
gi|228722556|gb|EEL73944.1| hypothetical protein bcere0027_46010 [Bacillus cereus AH676]
gi|228734878|gb|EEL85516.1| hypothetical protein bcere0029_46920 [Bacillus cereus AH1272]
gi|228741085|gb|EEL91310.1| hypothetical protein bcere0030_46810 [Bacillus cereus AH1273]
gi|228747091|gb|EEL96973.1| hypothetical protein bmyco0001_45420 [Bacillus mycoides DSM 2048]
gi|228771491|gb|EEM19960.1| hypothetical protein bthur0001_48520 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228777799|gb|EEM26071.1| hypothetical protein bthur0002_48460 [Bacillus thuringiensis Bt407]
gi|228784569|gb|EEM32589.1| hypothetical protein bthur0003_47960 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228791616|gb|EEM39212.1| hypothetical protein bthur0004_48450 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228798494|gb|EEM45486.1| hypothetical protein bthur0005_46480 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228804349|gb|EEM50960.1| hypothetical protein bthur0006_45740 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228810982|gb|EEM57325.1| hypothetical protein bthur0007_47990 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228817452|gb|EEM63537.1| hypothetical protein bthur0008_47490 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228823364|gb|EEM69197.1| hypothetical protein bthur0009_46860 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228829656|gb|EEM75282.1| hypothetical protein bthur0010_46580 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228835816|gb|EEM81179.1| hypothetical protein bthur0011_46620 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228842058|gb|EEM87161.1| hypothetical protein bthur0012_47840 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228848741|gb|EEM93586.1| hypothetical protein bthur0013_49320 [Bacillus thuringiensis IBL
200]
gi|228856185|gb|EEN00719.1| hypothetical protein bthur0014_46170 [Bacillus thuringiensis IBL
4222]
gi|229268485|gb|ACQ50122.1| nifU domain protein [Bacillus anthracis str. A0248]
gi|296326444|gb|ADH09372.1| NifU protein [Bacillus thuringiensis BMB171]
gi|300378606|gb|ADK07510.1| nitrogen-fixing NifU domain protein [Bacillus cereus biovar
anthracis str. CI]
gi|324328882|gb|ADY24142.1| nitrogen-fixing NifU domain-containing protein [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|326942769|gb|AEA18665.1| NifU protein [Bacillus thuringiensis serovar chinensis CT-43]
Length = 78
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+++ EVLD ++RP + RDGGD+ +GIV L + GAC CPS++ TLK G+ L
Sbjct: 8 EQVLEVLD-KLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGIERALLE 66
Query: 179 FVPEVKDIRTV 189
VP V ++ V
Sbjct: 67 EVPGVIEVEQV 77
>gi|254455102|ref|ZP_05068538.1| NifU-like domain protein [Octadecabacter antarcticus 238]
gi|198263804|gb|EDY88075.1| NifU-like domain protein [Octadecabacter antarcticus 238]
Length = 419
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 10 NPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQ-Y 68
+P TL+FI V ++ + +A + +PLA +F+I G+ V I V +
Sbjct: 18 DPQTLRFILEAPVQDSTSVCYDDA--SADAPLARALFAISGVQRVEVDGASIYVSRSTDV 75
Query: 69 DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNR 128
DW L+ P+ I + ++ + L + + G+ D+ ++ + E+LD
Sbjct: 76 DWSALKAPIAVAIRD-------VLDSEALPLGQRSEAPKGE----DALLLLAVAELLDCE 124
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
PA+A GG + + + V+L M G C GC ++S TL+ G+ +L +P + +I
Sbjct: 125 ANPAIASHGGSVAVERVENSDVYLRMSGGCQGCAASSATLRQGIETMLRAGLPAIGEI 182
>gi|78224272|ref|YP_386019.1| nitrogen-fixing NifU-like [Geobacter metallireducens GS-15]
gi|78195527|gb|ABB33294.1| Nitrogen-fixing NifU-like protein [Geobacter metallireducens GS-15]
Length = 74
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+++ +K+VLD VRPA+ DGGD+ + + DG+V + + GAC CP ++ TLK G+
Sbjct: 1 MLEEVKKVLDT-VRPALQADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERT 59
Query: 176 LNHFVPEVKDIRTV 189
L VP VK++ +V
Sbjct: 60 LKEKVPGVKEVISV 73
>gi|302389972|ref|YP_003825793.1| nitrogen-fixing NifU domain protein [Thermosediminibacter oceani
DSM 16646]
gi|302200600|gb|ADL08170.1| nitrogen-fixing NifU domain protein [Thermosediminibacter oceani
DSM 16646]
Length = 74
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI--VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++++EVL N++RP++ DGGD+ V GIV + + G+C GCP ++ TLK G+ +L
Sbjct: 3 EKVQEVL-NKIRPSLQADGGDVELVDVDEEKGIVKVRLTGSCFGCPFSTLTLKNGIEQVL 61
Query: 177 NHFVPEVKDIRTV 189
VP VK++++V
Sbjct: 62 KEEVPGVKEVQSV 74
>gi|269792680|ref|YP_003317584.1| nitrogen-fixing NifU domain-containing protein [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100315|gb|ACZ19302.1| nitrogen-fixing NifU domain protein [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 76
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++IK++++ +RPA+ GGDI FKG+ G+V +++ GAC CP A ETL+ V ++
Sbjct: 3 EQIKKLIEEEIRPALQSHGGDIDFKGFDQASGVVTVALTGACGTCPFAQETLRVQVEQVI 62
Query: 177 NHFVPEVKDIR 187
P V ++
Sbjct: 63 RRSFPSVTAVK 73
>gi|304317418|ref|YP_003852563.1| nitrogen-fixing NifU domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778920|gb|ADL69479.1| nitrogen-fixing NifU domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 73
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+R++EVL N +RP++ DGGD+ + DG+V + + GAC GCP A TLK G+ +
Sbjct: 3 ERVEEVL-NLLRPSLQADGGDVELIDVTDDGVVQVKLTGACGGCPFAVMTLKEGIERAIK 61
Query: 178 HFVPEVKDI 186
+PEVK++
Sbjct: 62 EELPEVKEV 70
>gi|154413784|ref|XP_001579921.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
gi|121914133|gb|EAY18935.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
Length = 112
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 96 GLGDMKLDDMGSGDFIESDS-AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSM 154
G G+ + E+D+ + QR+ ++++ +VRP + +D GDI ++G + + +
Sbjct: 11 GFGNFFIRSFAKEAVKETDADKLFQRVNKIIEEKVRPFIKQDHGDIELVDIKNGCMIVQL 70
Query: 155 RGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
GAC GC + TL GV + +PE+ +IR
Sbjct: 71 EGACEGCGCKNTTLYNGVLGTVQEEIPEITNIR 103
>gi|237752984|ref|ZP_04583464.1| NifU family protein [Helicobacter winghamensis ATCC BAA-430]
gi|229375251|gb|EEO25342.1| NifU family protein [Helicobacter winghamensis ATCC BAA-430]
Length = 81
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD+ +++ ++ +D +VRP + +DGG++ +G V++ + GAC GCPS+++TLK+G+
Sbjct: 5 SDTELLKPVEASID-KVRPMLIKDGGNVTLIKIENGKVYVRLEGACKGCPSSTQTLKFGI 63
Query: 173 ANILN 177
L
Sbjct: 64 ERTLK 68
>gi|317154501|ref|YP_004122549.1| nitrogen-fixing NifU domain-containing protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316944752|gb|ADU63803.1| nitrogen-fixing NifU domain protein [Desulfovibrio aespoeensis
Aspo-2]
Length = 74
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILN 177
+++ +VLD +VRPA+ DGGD+ D GIV + + GAC GCP + TLK G+ I+
Sbjct: 3 EKVMKVLD-KVRPALQGDGGDVELVDITDKGIVQVRLTGACKGCPMSQMTLKNGIERIIL 61
Query: 178 HFVPEVKDIRTV 189
+PE+K + V
Sbjct: 62 KEIPEIKGVEAV 73
>gi|198414946|ref|XP_002131248.1| PREDICTED: similar to NFU1 iron-sulfur cluster scaffold homolog
(HIRA-interacting protein 5) [Ciona intestinalis]
Length = 201
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 12/182 (6%)
Query: 16 FIPGQVVL---VEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKD----QY 68
F PG VL E I + + SPL +I I GI SV I V K+
Sbjct: 3 FHPGCPVLHNLNEQKIKYHSRHPCYHSPLVRQIMKIDGIESVTLFTKHIHVQKNTDTLSP 62
Query: 69 DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA--VVQRIKEVLD 126
W ++P ++ ++ F S P + + SG+ + + I ++++
Sbjct: 63 QWSSIKPIIVATLINFFASQLPTTTHHQSKRLHYHK-ESGECVAYGKLDDIEYVIDDLIN 121
Query: 127 NRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVK 184
+R+RP V +GGD+++K + +G V++ + G+C P A+ + +L + VP V
Sbjct: 122 SRIRPTVQDEGGDVIYKDFNRGNGTVYVLLLGSCLYTPKATNAITSATLLLLQYHVPCVT 181
Query: 185 DI 186
+
Sbjct: 182 SV 183
>gi|323488633|ref|ZP_08093875.1| NifU-like protein [Planococcus donghaensis MPA1U2]
gi|323397651|gb|EGA90455.1| NifU-like protein [Planococcus donghaensis MPA1U2]
Length = 78
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+++ + ++ EVLD ++RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 2 TEALLEDQVMEVLD-KLRPFLLRDGGDCELVDIEDGIVKLRLLGACGSCPSSTITLKAGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L VP + ++ V
Sbjct: 61 ERALVEEVPGIVEVEQV 77
>gi|317472464|ref|ZP_07931786.1| NifU domain-containing protein [Anaerostipes sp. 3_2_56FAA]
gi|316900037|gb|EFV22029.1| NifU domain-containing protein [Anaerostipes sp. 3_2_56FAA]
Length = 99
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 45/70 (64%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+++ I++VL+ VRP + G++ Y++GI+ + + G CSGCPSA+ T + +A +
Sbjct: 1 MLREIEKVLEEDVRPYLLEHEGNVRISEYKEGILKVRLTGQCSGCPSAALTTEELIAEAV 60
Query: 177 NHFVPEVKDI 186
+PEVKD+
Sbjct: 61 KKKIPEVKDV 70
>gi|65316943|ref|ZP_00389902.1| COG0694: Thioredoxin-like proteins and domains [Bacillus anthracis
str. A2012]
Length = 95
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+++ EVLD ++RP + RDGGD+ +GIV L + GAC CPS++ TLK G+ L
Sbjct: 8 EQVLEVLD-KLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGIERALLE 66
Query: 179 FVPEVKDIRTV 189
VP V ++ V
Sbjct: 67 EVPGVIEVEQV 77
>gi|218289813|ref|ZP_03494013.1| nitrogen-fixing NifU domain protein [Alicyclobacillus
acidocaldarius LAA1]
gi|258510957|ref|YP_003184391.1| nitrogen-fixing NifU domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|218240104|gb|EED07289.1| nitrogen-fixing NifU domain protein [Alicyclobacillus
acidocaldarius LAA1]
gi|257477683|gb|ACV58002.1| nitrogen-fixing NifU domain protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 81
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILN 177
RI+E +++ +R A+ +DGGD+ F Y D V++S++GAC GCP++ TLK G+ +
Sbjct: 11 RIREAIES-IREAIQQDGGDVEFVSYDDLSKTVYVSLQGACVGCPASVMTLKMGIERAVK 69
Query: 178 HFVPEVKDIRTV 189
P+V+ + V
Sbjct: 70 KVAPDVEYVEAV 81
>gi|313206297|ref|YP_004045474.1| nitrogen-fixing nifu domain protein [Riemerella anatipestifer DSM
15868]
gi|312445613|gb|ADQ81968.1| nitrogen-fixing NifU domain protein [Riemerella anatipestifer DSM
15868]
gi|315023020|gb|EFT36033.1| Nitrogen-fixing NifU, C-terminal [Riemerella anatipestifer RA-YM]
gi|325336260|gb|ADZ12534.1| Thioredoxin-like protein [Riemerella anatipestifer RA-GD]
Length = 78
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
+E++S V R++ L++ +RP + +DGGDI D +V++ + G CSGCP + T+K
Sbjct: 1 MENNSLEV-RVENALES-IRPFLNKDGGDIELIKIEDTVVYVKLLGNCSGCPVSFSTMKL 58
Query: 171 GVANILNHFVPEVKDIRTV 189
GV N + VPE+ + V
Sbjct: 59 GVENTVKEKVPEITRVENV 77
>gi|73663148|ref|YP_301929.1| hypothetical protein SSP1839 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495663|dbj|BAE18984.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 80
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
++ EV++ ++RP + RDGGD DGIV L + GAC CPS++ TLK G+ L+
Sbjct: 11 QVAEVIE-KLRPFLLRDGGDCSLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEE 69
Query: 180 VPEVKDIRTV 189
VP V ++ V
Sbjct: 70 VPGVIEVEQV 79
>gi|163784585|ref|ZP_02179431.1| nifU-like domain protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159880146|gb|EDP73804.1| nifU-like domain protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 89
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 112 ESDSAVVQRIK--EVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETL 168
E++ A + R K EVL+ ++RPA+ DGGD+ DG V++ + GACSGC + TL
Sbjct: 3 ENNQATIDRAKVEEVLE-KIRPALRFDGGDVELVDIGEDGTVYVRLMGACSGCAMSLMTL 61
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PEVK++ V
Sbjct: 62 KGGIEQRLKQEIPEVKEVVAV 82
>gi|258591187|emb|CBE67482.1| conserved protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length = 197
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 101 KLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSG 160
K+D+ SG + + +A VQR V+D R+ P VA GG + +DGI +++ G C G
Sbjct: 91 KIDNPNSG-WTDPVAAAVQR---VIDARINPGVAAHGGYVTLLDVKDGIAYITFGGGCHG 146
Query: 161 CPSASETLKYGVANILNHFVPEVKDI 186
C A TLK GVA + VPE+ +
Sbjct: 147 CGMADVTLKQGVAVEIQKAVPEIHQV 172
>gi|150016970|ref|YP_001309224.1| NifU domain-containing protein [Clostridium beijerinckii NCIMB
8052]
gi|149903435|gb|ABR34268.1| nitrogen-fixing NifU domain protein [Clostridium beijerinckii NCIMB
8052]
Length = 93
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++ I V++ +++P +A GDI +G+ ++ + GACSGCPSA T++ ++ +L
Sbjct: 5 MIDEINNVINTKIKPLLAEHNGDIELVEVNNGVAYVKLLGACSGCPSARFTMEELISCVL 64
Query: 177 NHFVPEVKDIRTV 189
+PE+KD++ V
Sbjct: 65 KE-IPEIKDVQLV 76
>gi|330837803|ref|YP_004412444.1| nitrogen-fixing NifU domain-containing protein [Spirochaeta
coccoides DSM 17374]
gi|329749706|gb|AEC03062.1| nitrogen-fixing NifU domain-containing protein [Spirochaeta
coccoides DSM 17374]
Length = 78
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++IKE ++ +RPA+ DGGDI F D V + + GAC+GCP A TLK GV L+H
Sbjct: 3 EQIKEAIEA-IRPAIQNDGGDIEFVQLDDNKVIVRLTGACAGCPMAKMTLKGGVERYLHH 61
Query: 179 FV 180
V
Sbjct: 62 AV 63
>gi|212640233|ref|YP_002316753.1| thioredoxin-like protein [Anoxybacillus flavithermus WK1]
gi|212561713|gb|ACJ34768.1| Thioredoxin-like protein [Anoxybacillus flavithermus WK1]
Length = 80
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+D + Q+++EVLD ++RP + RDGGD DG+V L + GAC CPS++ TLK G+
Sbjct: 4 ADQDIKQQVQEVLD-KLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGI 62
Query: 173 ANIL 176
L
Sbjct: 63 ERAL 66
>gi|308070638|ref|YP_003872243.1| thioredoxin-like protein [Paenibacillus polymyxa E681]
gi|305859917|gb|ADM71705.1| Thioredoxin-like protein [Paenibacillus polymyxa E681]
Length = 81
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 113 SDSAVVQRIKEVLD--NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
S++ VQ EV D +++RP + RDGGD+ DGIV L + GAC CPS++ TLK
Sbjct: 2 SETQSVQMYDEVADVLDKLRPFLQRDGGDVELVDVEDGIVKLKLVGACGSCPSSTITLKA 61
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ L V V+++ V
Sbjct: 62 GIERALLEEVDGVQEVVQV 80
>gi|332296888|ref|YP_004438810.1| nitrogen-fixing NifU domain-containing protein [Treponema
brennaborense DSM 12168]
gi|332179991|gb|AEE15679.1| nitrogen-fixing NifU domain-containing protein [Treponema
brennaborense DSM 12168]
Length = 76
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYGVANILNH 178
++K+ LD ++RP + DGGD+ F G VF+ + GAC CP A+ TLK GV L
Sbjct: 6 KVKDALD-KIRPQLQADGGDLEFVSMEAGGKVFVKLTGACGNCPMATMTLKQGVERFLKD 64
Query: 179 FVPEVKDI 186
+PEV ++
Sbjct: 65 TIPEVTEV 72
>gi|301168132|emb|CBW27720.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 85
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 45/70 (64%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++++I+ + D +VRPA+A GG++ +G +F+ + G C GC S+S TLK G+ ++
Sbjct: 1 MIRKIENLFDEQVRPALAAHGGNVEVIDIDNGKLFVKLSGGCQGCSSSSATLKDGIERMV 60
Query: 177 NHFVPEVKDI 186
PE++++
Sbjct: 61 KQNFPEIEEV 70
>gi|78776531|ref|YP_392846.1| nitrogen-fixing NifU-like protein [Sulfurimonas denitrificans DSM
1251]
gi|78497071|gb|ABB43611.1| Nitrogen-fixing NifU-like protein [Sulfurimonas denitrificans DSM
1251]
Length = 91
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+D ++ ++ V+D +VRP++A D GDI F ++ V++ ++GAC GC S+ TLKYGV
Sbjct: 5 TDEELMNPVRNVID-KVRPSLALDSGDISFITVKNSKVYIQLKGACVGCASSGTTLKYGV 63
Query: 173 ANILNHFV-PEV 183
L + PE+
Sbjct: 64 ERQLKMDIHPEI 75
>gi|302392635|ref|YP_003828455.1| nitrogen-fixing NifU domain protein [Acetohalobium arabaticum DSM
5501]
gi|302204712|gb|ADL13390.1| nitrogen-fixing NifU domain protein [Acetohalobium arabaticum DSM
5501]
Length = 72
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%)
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+++RP++ DGG + +G+V + + GAC GCP + TLK G+ +L +PEV+ +
Sbjct: 10 DKIRPSLEADGGGVELIDVEEGVVKVKLTGACGGCPMSQMTLKNGIERVLKEEIPEVEKV 69
Query: 187 RTV 189
+V
Sbjct: 70 ESV 72
>gi|113476915|ref|YP_722976.1| nitrogen-fixing NifU-like protein [Trichodesmium erythraeum IMS101]
gi|110167963|gb|ABG52503.1| nitrogen-fixing NifU-like [Trichodesmium erythraeum IMS101]
Length = 80
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
E++ + +RP +A DGG++ IV L ++GACS CPS++ TLK G+ L +PE
Sbjct: 13 EIVLDELRPYLAADGGNVELVDIEGPIVKLRLQGACSSCPSSTMTLKMGIERKLREEIPE 72
Query: 183 VKDIRTV 189
+ ++ +V
Sbjct: 73 IAEVESV 79
>gi|288574803|ref|ZP_06393160.1| nitrogen-fixing NifU domain protein [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288570544|gb|EFC92101.1| nitrogen-fixing NifU domain protein [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 77
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVA 173
+++ RI EV+D +RPA+ GGD+ + G++ ++GAC CP A ETL+ V
Sbjct: 2 SLIDRINEVVDKSIRPALQSHGGDVEVVSFDEESGVISARLQGACGTCPFAQETLRMQVE 61
Query: 174 NILNHFVPEVKDI 186
+L +PEV +
Sbjct: 62 AVLKREIPEVSSV 74
>gi|327439123|dbj|BAK15488.1| thioredoxin-like protein [Solibacillus silvestris StLB046]
Length = 78
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+++EVLD ++RP + RDGGD +GIV L + GAC CPS++ TLK G+ L
Sbjct: 9 QVQEVLD-KLRPFLLRDGGDCELVDIEEGIVKLRLLGACGSCPSSTITLKAGIERALLEE 67
Query: 180 VPEVKDIRTV 189
VP + ++ V
Sbjct: 68 VPGIVEVEQV 77
>gi|258405531|ref|YP_003198273.1| nitrogen-fixing NifU domain-containing protein [Desulfohalobium
retbaense DSM 5692]
gi|257797758|gb|ACV68695.1| nitrogen-fixing NifU domain protein [Desulfohalobium retbaense DSM
5692]
Length = 73
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYGVANILN 177
++I+ LD +VRP + DGGDI D IV + ++GAC GCP + TLK GV +L
Sbjct: 3 EKIEAALD-KVRPVLQADGGDIELVEITDNNIVRVRLQGACKGCPMSQMTLKNGVERVLL 61
Query: 178 HFVPEVKDIRTV 189
VPE+K + +V
Sbjct: 62 KEVPEIKGVESV 73
>gi|195952454|ref|YP_002120744.1| nitrogen-fixing NifU domain protein [Hydrogenobaculum sp. Y04AAS1]
gi|195932066|gb|ACG56766.1| nitrogen-fixing NifU domain protein [Hydrogenobaculum sp. Y04AAS1]
Length = 87
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANI 175
V+ ++E LD +RPA+ DGGDI DG V + + GACSGC ++ TLK GV
Sbjct: 5 TVEEVEEALDE-IRPALRFDGGDIELVSIEEDGTVLVRLMGACSGCGMSTLTLKAGVERA 63
Query: 176 LNHFVPEVKDIRTV 189
L P++K+++ V
Sbjct: 64 LKQKFPDIKEVKDV 77
>gi|300776481|ref|ZP_07086339.1| nitrogen fixation protein NifU [Chryseobacterium gleum ATCC 35910]
gi|300501991|gb|EFK33131.1| nitrogen fixation protein NifU [Chryseobacterium gleum ATCC 35910]
Length = 82
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V R+ E L++ +RP + +DGGDI +D VF+ + G CSGC TLK GV N +
Sbjct: 11 VTRVMEALES-IRPFLNKDGGDIELIDVKDNQVFVKLLGNCSGCSLNFSTLKLGVENTIK 69
Query: 178 HFVPEVKDIRTV 189
PE++ + V
Sbjct: 70 QHAPEIEKVINV 81
>gi|154414462|ref|XP_001580258.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
gi|121914474|gb|EAY19272.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
Length = 103
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
F ++ ++ V++ RVRPA+ DGGDI K DGIV + M G C GCPS TL
Sbjct: 18 FAKASKEFFDKVNAVIEERVRPALLSDGGDITLKDITDGIVTVQMFGHCVGCPSKQITLN 77
Query: 170 YGVANILN 177
+ + L
Sbjct: 78 SRILDCLQ 85
>gi|56421496|ref|YP_148814.1| nitrogen fixation NifU protein [Geobacillus kaustophilus HTA426]
gi|138896548|ref|YP_001127001.1| nitrogen fixation protein NifU [Geobacillus thermodenitrificans
NG80-2]
gi|56381338|dbj|BAD77246.1| nitrogen fixation protein (NifU protein) [Geobacillus kaustophilus
HTA426]
gi|134268061|gb|ABO68256.1| Nitrogen fixation protein NifU [Geobacillus thermodenitrificans
NG80-2]
Length = 80
Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+D + ++++EVLD ++RP + RDGGD DG+V L + GAC CPS++ TLK G+
Sbjct: 4 TDQEIKEQVQEVLD-KLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGI 62
Query: 173 ANIL 176
L
Sbjct: 63 ERAL 66
>gi|319760689|ref|YP_004124627.1| Fe/S biogenesis protein nfuA [Candidatus Blochmannia vafer str.
BVAF]
gi|318039403|gb|ADV33953.1| Fe/S biogenesis protein nfuA [Candidatus Blochmannia vafer str.
BVAF]
Length = 202
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
I ++S++ RIK V+ ++ P +A GG + + K DG+ L G C+GC A T+K
Sbjct: 112 ITNNSSLTDRIKYVITQQINPQLAMHGGSVSLIKVNTDGMAILQFHGGCNGCSMALYTIK 171
Query: 170 YGVANILNHFVPEVKDI 186
G+ L F PE+K +
Sbjct: 172 EGIEKTLKKFFPELKGV 188
>gi|261420397|ref|YP_003254079.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y412MC61]
gi|297528899|ref|YP_003670174.1| nitrogen-fixing NifU domain protein [Geobacillus sp. C56-T3]
gi|319768064|ref|YP_004133565.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y412MC52]
gi|261376854|gb|ACX79597.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y412MC61]
gi|297252151|gb|ADI25597.1| nitrogen-fixing NifU domain protein [Geobacillus sp. C56-T3]
gi|317112930|gb|ADU95422.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y412MC52]
Length = 78
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+D + ++++EVLD ++RP + RDGGD DG+V L + GAC CPS++ TLK G+
Sbjct: 2 TDQEIKEQVQEVLD-KLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGI 60
Query: 173 ANIL 176
L
Sbjct: 61 ERAL 64
>gi|239828215|ref|YP_002950839.1| nitrogen-fixing NifU domain protein [Geobacillus sp. WCH70]
gi|239808508|gb|ACS25573.1| nitrogen-fixing NifU domain protein [Geobacillus sp. WCH70]
Length = 78
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+D + ++++EVLD ++RP + RDGGD DG+V L + GAC CPS++ TLK G+
Sbjct: 2 TDQEIKEQVQEVLD-KLRPFLLRDGGDCELIDVEDGVVKLRLLGACGSCPSSTITLKAGI 60
Query: 173 ANIL 176
L
Sbjct: 61 ERAL 64
>gi|323699074|ref|ZP_08110986.1| nitrogen-fixing NifU domain protein [Desulfovibrio sp. ND132]
gi|323459006|gb|EGB14871.1| nitrogen-fixing NifU domain protein [Desulfovibrio desulfuricans
ND132]
Length = 73
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILN 177
++++ VLD +VRP + DGGD+ D GIV + + GAC GCP + TLK G+ I+
Sbjct: 3 KKVEAVLD-KVRPMLQGDGGDVELVEVTDNGIVKVRLTGACKGCPMSQMTLKNGIERIIL 61
Query: 178 HFVPEVKDIRTV 189
+PEVK + V
Sbjct: 62 KEIPEVKGVEAV 73
>gi|326534082|dbj|BAJ89391.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD VRP++ RDGG++ +V L ++GAC CPS++ TLK G+ + L
Sbjct: 68 ENVERVLDE-VRPSLMRDGGNVALHEIDGLVVVLMLQGACGSCPSSTMTLKMGIESRLRD 126
Query: 179 FVPEVKDIRTV 189
+PE+ ++ +
Sbjct: 127 KIPEILEVEQI 137
>gi|332982274|ref|YP_004463715.1| nitrogen-fixing NifU domain-containing protein [Mahella
australiensis 50-1 BON]
gi|332699952|gb|AEE96893.1| nitrogen-fixing NifU domain protein [Mahella australiensis 50-1
BON]
Length = 73
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 127 NRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
++RPA+ DGGD+ + DG+V + + GAC CP A TLK G+ L VPEVK+
Sbjct: 10 EKIRPALKADGGDVELVDVASDGVVKVKLTGACGACPFALMTLKQGIEETLKESVPEVKE 69
Query: 186 IRTV 189
+ V
Sbjct: 70 VVAV 73
>gi|160915579|ref|ZP_02077790.1| hypothetical protein EUBDOL_01587 [Eubacterium dolichum DSM 3991]
gi|158432699|gb|EDP10988.1| hypothetical protein EUBDOL_01587 [Eubacterium dolichum DSM 3991]
Length = 76
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++ IK V+ N++RP + RDGGD+ F + +GIV + + GAC GC S ET+ G+ IL
Sbjct: 5 IEEIKHVI-NKIRPYIQRDGGDVEFVSFDNGIVAVRLLGACIGCASVDETISGGIEAIL 62
>gi|39995588|ref|NP_951539.1| NifU-like domain-containing protein [Geobacter sulfurreducens PCA]
gi|39982351|gb|AAR33812.1| NifU-like domain protein [Geobacter sulfurreducens PCA]
gi|298504607|gb|ADI83330.1| thioredoxin/NifU-like domain protein [Geobacter sulfurreducens
KN400]
Length = 74
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+++ +K+VLD VRPA+ DGGD+ + + DG+V + + GAC CP ++ TLK G+
Sbjct: 1 MLEDVKKVLD-LVRPALQADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERT 59
Query: 176 LNHFVPEVKDIRTV 189
L VP VK++ +V
Sbjct: 60 LKEKVPGVKEVVSV 73
>gi|83816071|ref|YP_445990.1| hypothetical protein SRU_1878 [Salinibacter ruber DSM 13855]
gi|294507901|ref|YP_003571959.1| conserved hypothetical protein containing thioredoxin-like domain
[Salinibacter ruber M8]
gi|83757465|gb|ABC45578.1| conserved hypothetical protein [Salinibacter ruber DSM 13855]
gi|294344229|emb|CBH25007.1| conserved hypothetical protein containing thioredoxin-like domain
[Salinibacter ruber M8]
Length = 142
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
Q E TPNP +LKF + G + +S+A EA PLA R+F + G+ V+ F+
Sbjct: 55 TQAESTPNPNSLKFTTDDGPFLSGGVAAYSSADEAAEDPLARRLFGVSGVDDVFITPQFV 114
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHF 85
TV K DW ++P V ++ EH
Sbjct: 115 TVSKAPSVDWGSVKPDVETILAEHL 139
>gi|90021654|ref|YP_527481.1| hypothetical protein Sde_2009 [Saccharophagus degradans 2-40]
gi|89951254|gb|ABD81269.1| HesB/YadR/YfhF [Saccharophagus degradans 2-40]
Length = 203
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLK 169
I DS + RI VL N V P +A GG++ + D + + L G C GC + TLK
Sbjct: 113 ITEDSTIEDRINYVLYNEVNPGLAAHGGNVSLEAITDDMHIVLKFGGGCQGCSAVDMTLK 172
Query: 170 YGVANILNHFVPEVKDIR 187
GV L VPE+K +R
Sbjct: 173 QGVEKTLMERVPEIKGVR 190
>gi|134300123|ref|YP_001113619.1| NifU domain-containing protein [Desulfotomaculum reducens MI-1]
gi|134052823|gb|ABO50794.1| nitrogen-fixing NifU domain protein [Desulfotomaculum reducens
MI-1]
Length = 74
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILN 177
+++KE L+ +VRP + RDGGD+ F + G+V + +RGAC CP A TLK G+ +L
Sbjct: 3 EQVKEALE-QVRPFLQRDGGDVEFVDCDEKGVVKVKLRGACGSCPGALYTLKNGIERVLK 61
Query: 178 HFVPEVKDI 186
VP V ++
Sbjct: 62 QQVPGVTEV 70
>gi|57233705|ref|YP_182326.1| NifU-like protein [Dehalococcoides ethenogenes 195]
gi|57224153|gb|AAW39210.1| NifU-like protein [Dehalococcoides ethenogenes 195]
Length = 72
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++++++ VLD ++RPA+ DGG++ DG+V + + GAC+GCP ++ TLK G+ IL
Sbjct: 1 MLEKVEAVLD-KIRPALEADGGNVELVEVVDGVVKVKLVGACAGCPMSTMTLKNGIEKIL 59
Query: 177 NHFVPEVKDI 186
+PEVK++
Sbjct: 60 KREIPEVKEV 69
>gi|257064210|ref|YP_003143882.1| thioredoxin-like protein [Slackia heliotrinireducens DSM 20476]
gi|256791863|gb|ACV22533.1| thioredoxin-like protein [Slackia heliotrinireducens DSM 20476]
Length = 76
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+RI+ VL+ +RP++ DGGD+ DG+V + + GAC+GCP + TL GV +L
Sbjct: 6 ERIERVLE-LIRPSLQADGGDLELVDVGDDGVVTVHLTGACNGCPLSQLTLANGVRRVLK 64
Query: 178 HFVPEVKDIRTV 189
VP V D+R V
Sbjct: 65 ERVPSVTDVRAV 76
>gi|319650406|ref|ZP_08004549.1| nitrogen-fixing NifU-like protein [Bacillus sp. 2_A_57_CT2]
gi|317397967|gb|EFV78662.1| nitrogen-fixing NifU-like protein [Bacillus sp. 2_A_57_CT2]
Length = 79
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ + ++++EVLD ++RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 5 TTMTEQVQEVLD-KLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIER 63
Query: 175 IL 176
L
Sbjct: 64 AL 65
>gi|77919925|ref|YP_357740.1| NifU-like protein [Pelobacter carbinolicus DSM 2380]
gi|77546008|gb|ABA89570.1| NifU-like protein [Pelobacter carbinolicus DSM 2380]
Length = 103
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
Query: 101 KLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACS 159
+LDD G E ++ E+LD ++RP++ DGGD+ + DG+V + ++GAC
Sbjct: 20 ELDDKGRCQMKE-------QVLEILD-KIRPSLQADGGDVELVDISEDGVVKVRLKGACG 71
Query: 160 GCPSASETLKYGVANILNHFVPEVKDI 186
CP ++ TLK G+ L VP VK++
Sbjct: 72 SCPMSTMTLKMGIERTLKAQVPGVKEV 98
>gi|57168801|ref|ZP_00367932.1| nifU protein homolog Cj1639 [Campylobacter coli RM2228]
gi|305432457|ref|ZP_07401619.1| NifU family protein [Campylobacter coli JV20]
gi|57019848|gb|EAL56531.1| nifU protein homolog Cj1639 [Campylobacter coli RM2228]
gi|304444496|gb|EFM37147.1| NifU family protein [Campylobacter coli JV20]
Length = 90
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD ++ +K LD + P + RDGG + F G ++G+V++ + GAC GC S+ TLKYG+
Sbjct: 5 SDEELINPVKASLDKSM-PMLERDGGGLEFLGIKNGVVYVHLIGACKGCASSGTTLKYGL 63
Query: 173 ANILN 177
L
Sbjct: 64 ERQLK 68
>gi|328953813|ref|YP_004371147.1| nitrogen-fixing NifU domain-containing protein [Desulfobacca
acetoxidans DSM 11109]
gi|328454137|gb|AEB09966.1| nitrogen-fixing NifU domain-containing protein [Desulfobacca
acetoxidans DSM 11109]
Length = 72
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 128 RVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
++RP + RDGGD+ G+V + + GAC GCP + TLK G+ +L VP + +
Sbjct: 11 KIRPMLQRDGGDVELVEVEHGVVKVKLTGACKGCPMSQMTLKNGIERLLKQEVPGIVSVE 70
Query: 188 TV 189
+V
Sbjct: 71 SV 72
>gi|307266231|ref|ZP_07547773.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|326390563|ref|ZP_08212119.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter ethanolicus
JW 200]
gi|306918761|gb|EFN48993.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|325993388|gb|EGD51824.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter ethanolicus
JW 200]
Length = 73
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+R++EVL+ +RP++ DGG++ + DGIV + + GAC GCP A+ TLK G+ +
Sbjct: 3 ERVEEVLE-LLRPSLQADGGNVELIDVTEDGIVKVRLTGACGGCPFATLTLKEGIERAIK 61
Query: 178 HFVPEVKDI 186
+PEV+++
Sbjct: 62 EEIPEVREV 70
>gi|4558563|gb|AAD22656.1|AC007138_20 putative NifU-like metallocluster assembly factor [Arabidopsis
thaliana]
gi|7268578|emb|CAB80687.1| putative NifU-like metallocluster assembly factor [Arabidopsis
thaliana]
Length = 174
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
Q + VL++ VRP + DGG++ DG+V L ++GAC+ CPS+S T+ G+ +L
Sbjct: 87 QNVDLVLED-VRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVLKE 145
Query: 179 -FVPEVKDIRTV 189
F +KDIR V
Sbjct: 146 KFGDALKDIRQV 157
>gi|123434403|ref|XP_001308803.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
gi|121890501|gb|EAX95873.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
Length = 114
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 45/71 (63%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ +R+ ++++ +VRP + +GGDI ++G + +S+ GAC+ C S + TL GV +
Sbjct: 34 LFKRVNKIIEEKVRPFIRSEGGDIELVDIKNGCMIVSLEGACTHCGSKNNTLYNGVLGAV 93
Query: 177 NHFVPEVKDIR 187
+PE+++IR
Sbjct: 94 QDEIPEIENIR 104
>gi|296272309|ref|YP_003654940.1| nitrogen-fixing NifU domain-containing protein [Arcobacter
nitrofigilis DSM 7299]
gi|296096483|gb|ADG92433.1| nitrogen-fixing NifU domain protein [Arcobacter nitrofigilis DSM
7299]
Length = 92
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD + +K ++DN++ P +A+DGG + ++G VF+ + GAC GC ++ TLKY V
Sbjct: 5 SDEDLFPVVKNIIDNKIAPMLAQDGGAMTLLDVKNGKVFVQLNGACVGCSASGSTLKYVV 64
>gi|241890053|ref|ZP_04777351.1| Fe/S biogenesis protein NfuA [Gemella haemolysans ATCC 10379]
gi|241863675|gb|EER68059.1| Fe/S biogenesis protein NfuA [Gemella haemolysans ATCC 10379]
Length = 84
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V++IK L+ ++RP + DGG+I F Y+DGI+ + G C+ C + TLKY + L
Sbjct: 9 VEKIKFELE-KIRPKLIMDGGNIEFINYKDGILKVRFLGECAHCELSHITLKYAIEKTLI 67
Query: 178 HFVPEVKDIRTV 189
+PE+K + V
Sbjct: 68 EKIPEIKKVLQV 79
>gi|167747967|ref|ZP_02420094.1| hypothetical protein ANACAC_02699 [Anaerostipes caccae DSM 14662]
gi|167652617|gb|EDR96746.1| hypothetical protein ANACAC_02699 [Anaerostipes caccae DSM 14662]
Length = 116
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+++ I++VL+ VRP + G++ Y++GI+ + + G C GCPSA+ T + +A +
Sbjct: 18 MLREIEKVLEEDVRPYLLEHEGNVRISEYKEGILKVRLTGQCCGCPSAALTTEELIAEAV 77
Query: 177 NHFVPEVKDIRTV 189
+PEVKD+ V
Sbjct: 78 KKKIPEVKDVVLV 90
>gi|18411785|ref|NP_567219.1| NFU1; structural molecule [Arabidopsis thaliana]
gi|75163233|sp|Q93W77|NIFU1_ARATH RecName: Full=NifU-like protein 1, chloroplastic; Short=AtCNfu1;
Short=AtCnfU-IVb; Flags: Precursor
gi|14517434|gb|AAK62607.1| AT4g01940/T7B11_20 [Arabidopsis thaliana]
gi|15215670|gb|AAK91380.1| AT4g01940/T7B11_20 [Arabidopsis thaliana]
gi|20908090|gb|AAM26728.1| AT4g01940/T7B11_20 [Arabidopsis thaliana]
gi|28207816|emb|CAD55558.1| NFU1 protein [Arabidopsis thaliana]
gi|332656703|gb|AEE82103.1| NifU-like protein 1 [Arabidopsis thaliana]
Length = 231
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
Q + VL++ VRP + DGG++ DG+V L ++GAC+ CPS+S T+ G+ +L
Sbjct: 88 QNVDLVLED-VRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVLKE 146
Query: 179 -FVPEVKDIRTV 189
F +KDIR V
Sbjct: 147 KFGDALKDIRQV 158
>gi|90416073|ref|ZP_01224006.1| yhgI protein [marine gamma proteobacterium HTCC2207]
gi|90332447|gb|EAS47644.1| yhgI protein [marine gamma proteobacterium HTCC2207]
Length = 193
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
+ DS + RI +L N + P +A GG + +G L G C GC + S TLK
Sbjct: 104 VNDDSPIEDRINYLLYNEINPGLASHGGVVSLSEMDEGFAVLEFGGGCQGCSAVSMTLKE 163
Query: 171 GVANILNHFVPEVKDIRTV 189
GV L +PE+K +R V
Sbjct: 164 GVEKTLMEKIPELKGVRDV 182
>gi|313675047|ref|YP_004053043.1| nitrogen-fixing nifu domain protein [Marivirga tractuosa DSM 4126]
gi|312941745|gb|ADR20935.1| nitrogen-fixing NifU domain protein [Marivirga tractuosa DSM 4126]
Length = 91
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V+ RI++ LD+ +RP + DGG++ +G++ L + GAC CP ++ TLK GV +
Sbjct: 3 VLDRIEKALDS-IRPYLEADGGNVRILDLNEGVLRLELLGACGNCPMSTMTLKAGVEEAV 61
Query: 177 NHFVPEVKDIRTV 189
VPEV + V
Sbjct: 62 KKSVPEVTSVEAV 74
>gi|297627112|ref|YP_003688875.1| NifU-like protein [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296922877|emb|CBL57457.1| NifU-like protein [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 190
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 36/198 (18%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPG--------IA 52
+ + E T +PATL+++ +L P A + S PG ++
Sbjct: 18 IALHPEATDDPATLRWVVSHHIL----------------PFAGTLASAPGLDDLLADRVS 61
Query: 53 SVYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI 111
V G D + V DW L P V +M D + G D ++ +
Sbjct: 62 RVVVGPDTLLVTLAPGSDWAELGPVVRRALMRALGHTDAWV---GAADARV--------L 110
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
D A+ E+++ + GG I G +DG+V + M GAC GCP+A T+
Sbjct: 111 SGDDALGVCADELIEGPIGDIARAHGGHIALAGVQDGVVTVKMSGACRGCPAAVITMHQR 170
Query: 172 VANILNHFVPEVKDIRTV 189
+ + L VP + D+R++
Sbjct: 171 LEHQLRRRVPGLVDVRSI 188
>gi|331006512|ref|ZP_08329811.1| hypothetical protein IMCC1989_384 [gamma proteobacterium IMCC1989]
gi|330419680|gb|EGG94047.1| hypothetical protein IMCC1989_384 [gamma proteobacterium IMCC1989]
Length = 193
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLK 169
+ DS V RI VL N V P +A GG + + DG L G C GC + S TLK
Sbjct: 103 VNDDSPVEDRINYVLYNEVNPGLASHGGQVDLEDVTEDGFAILKFGGGCQGCSAVSLTLK 162
Query: 170 YGVANILNHFVPEVKDIRTV 189
GV L VPE+K ++ V
Sbjct: 163 EGVEKTLLEKVPELKGVKDV 182
>gi|288818297|ref|YP_003432645.1| NifU-like protein [Hydrogenobacter thermophilus TK-6]
gi|288787697|dbj|BAI69444.1| NifU-like protein [Hydrogenobacter thermophilus TK-6]
gi|308751894|gb|ADO45377.1| nitrogen-fixing NifU domain protein [Hydrogenobacter thermophilus
TK-6]
Length = 87
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I+ VLD +RPA+ DGGD+ + DG V + M GACSGC + TLK G+ L
Sbjct: 7 EEIEAVLDE-IRPALRFDGGDVELVDVLEDGTVLVRMMGACSGCGMSVLTLKAGIERALK 65
Query: 178 HFVPEVKDIRTV 189
+ PE+K+++ +
Sbjct: 66 NKFPEIKEVKDI 77
>gi|309776492|ref|ZP_07671474.1| NifU domain protein [Erysipelotrichaceae bacterium 3_1_53]
gi|308915720|gb|EFP61478.1| NifU domain protein [Erysipelotrichaceae bacterium 3_1_53]
Length = 76
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ IK+ ++ ++RP + RDGGD+ F + DGIV + + GAC GC S +T++ G+ IL
Sbjct: 5 IDEIKQTIE-KIRPYIQRDGGDVEFVSFEDGIVGVRLLGACVGCMSIDDTIQGGIEAILL 63
Query: 178 HFVPEVKDIRTV 189
V V +R V
Sbjct: 64 DEVDGVSGVRLV 75
>gi|220931159|ref|YP_002508067.1| nitrogen-fixing NifU domain protein [Halothermothrix orenii H 168]
gi|219992469|gb|ACL69072.1| nitrogen-fixing NifU domain protein [Halothermothrix orenii H 168]
Length = 74
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 127 NRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVK 184
+++RP++ DGGD+ D GIV + + GAC GCP ++ T+K G+ +L VP VK
Sbjct: 10 DKIRPSLQADGGDVKLVDVDDEKGIVKVKLLGACQGCPMSTMTIKNGIERVLKEKVPGVK 69
Query: 185 DIRTV 189
+++ V
Sbjct: 70 EVKPV 74
>gi|323704659|ref|ZP_08116237.1| nitrogen-fixing NifU domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323536121|gb|EGB25894.1| nitrogen-fixing NifU domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 73
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+R++EVL +RP++ DGGD+ + DG+V + + GAC GCP A TLK G+ +
Sbjct: 3 ERVEEVL-KLLRPSLQADGGDVELVDVTDDGVVQVRLTGACGGCPFAVMTLKEGIERAIK 61
Query: 178 HFVPEVKDI 186
+PEVK++
Sbjct: 62 EEIPEVKEV 70
>gi|302335395|ref|YP_003800602.1| nitrogen-fixing NifU domain protein [Olsenella uli DSM 7084]
gi|301319235|gb|ADK67722.1| nitrogen-fixing NifU domain protein [Olsenella uli DSM 7084]
Length = 85
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKY 170
E+ + + + + E + +R ++ DGGD+ G+ D G+V L M+GAC+GCP +S +
Sbjct: 4 ETKTPINRELLEATLDVIRQSLQADGGDVALVGFNDEGVVTLEMQGACAGCPLSSLDMSE 63
Query: 171 GVANILNHFVPEVKDIR 187
G+ IL VP V +
Sbjct: 64 GIERILKEHVPGVTKVE 80
>gi|57238650|ref|YP_179781.1| NifU family protein [Campylobacter jejuni RM1221]
gi|121612278|ref|YP_001001282.1| NifU family protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|148925779|ref|ZP_01809467.1| nifU protein like protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|153951478|ref|YP_001398916.1| NifU family protein [Campylobacter jejuni subsp. doylei 269.97]
gi|167006176|ref|ZP_02271934.1| NifU family protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|218563228|ref|YP_002345008.1| NifU protein [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|283957025|ref|ZP_06374497.1| NifU family protein [Campylobacter jejuni subsp. jejuni 1336]
gi|2960001|emb|CAA76497.1| hypothetical protein [Campylobacter jejuni]
gi|57167454|gb|AAW36233.1| NifU family protein [Campylobacter jejuni RM1221]
gi|112360935|emb|CAL35736.1| NifU protein homolog [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|121504156|gb|EAQ72687.2| NifU family protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|145845789|gb|EDK22880.1| nifU protein like protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|152938924|gb|ABS43665.1| NifU family protein [Campylobacter jejuni subsp. doylei 269.97]
gi|283791526|gb|EFC30323.1| NifU family protein [Campylobacter jejuni subsp. jejuni 1336]
gi|284926833|gb|ADC29185.1| NifU family protein [Campylobacter jejuni subsp. jejuni IA3902]
gi|315059089|gb|ADT73418.1| NifU-like protein [Campylobacter jejuni subsp. jejuni S3]
gi|315927611|gb|EFV06942.1| nifU-like domain protein [Campylobacter jejuni subsp. jejuni
DFVF1099]
Length = 90
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD ++ +K L+ + P + RDGG + F G ++GIV++ + GAC GC S+ TLKYG+
Sbjct: 5 SDEELINPVKASLEKSL-PMLERDGGGLEFLGIKNGIVYVHLIGACKGCASSGTTLKYGL 63
Query: 173 ANILN 177
L
Sbjct: 64 ERQLK 68
>gi|255548369|ref|XP_002515241.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
gi|223545721|gb|EEF47225.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
Length = 210
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH-FVPEVKDIR 187
VRP + DGG++ DG++ L ++GAC CPS++ T+K G+ +L F VKDIR
Sbjct: 76 VRPYLIADGGNVDVVSVEDGVISLQLQGACGSCPSSTTTMKMGIERVLKEKFGDSVKDIR 135
Query: 188 TV 189
V
Sbjct: 136 QV 137
>gi|301064688|ref|ZP_07205077.1| NifU-like protein [delta proteobacterium NaphS2]
gi|300441230|gb|EFK05606.1| NifU-like protein [delta proteobacterium NaphS2]
Length = 75
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++++ L+ +VRP++ DGGD+ +G+V + + GAC GCP + TLK G+ +L
Sbjct: 5 EKVQDALE-KVRPSLQADGGDVQLVDVDANGLVKVKLTGACGGCPMSQMTLKMGIEKVLK 63
Query: 178 HFVPEVKDIRT 188
VPEV + +
Sbjct: 64 QNVPEVTSVES 74
>gi|188996345|ref|YP_001930596.1| nitrogen-fixing NifU domain protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931412|gb|ACD66042.1| nitrogen-fixing NifU domain protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 79
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
Q+++EVL+ +VRP + DGGD+ DG V++ + GACSGC + TLK GV L
Sbjct: 6 QKVEEVLE-QVRPYLRFDGGDVELVDVGEDGTVYVRLMGACSGCHMSLWTLKGGVETRLK 64
Query: 178 HFVPEVKDI 186
+PEVK++
Sbjct: 65 QAIPEVKEV 73
>gi|116748860|ref|YP_845547.1| NifU domain-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116697924|gb|ABK17112.1| nitrogen-fixing NifU domain protein [Syntrophobacter fumaroxidans
MPOB]
Length = 72
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++++E L ++RP + RDGG + + +V + + GAC GCP + TLK G+ ++
Sbjct: 3 KKVEEAL-AKIRPMLERDGGSVELVDVQGTVVKVRLTGACHGCPMSQMTLKAGIERVVKE 61
Query: 179 FVPEVKDIRTV 189
VPEV ++++V
Sbjct: 62 NVPEVTEVQSV 72
>gi|302848639|ref|XP_002955851.1| hypothetical protein VOLCADRAFT_96828 [Volvox carteri f.
nagariensis]
gi|300258819|gb|EFJ43052.1| hypothetical protein VOLCADRAFT_96828 [Volvox carteri f.
nagariensis]
Length = 540
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V+ ++ L+ VRP + DGGD+ +DGIV+L ++GACS CPS S T+K G+ ++
Sbjct: 396 TVEAVQAALEE-VRPYLMADGGDVEVVEVKDGIVYLRLQGACSSCPSQSATMKGGIERVI 454
Query: 177 NH-FVPEVKDI 186
F +V DI
Sbjct: 455 RQTFGDQVIDI 465
>gi|86149351|ref|ZP_01067582.1| NifU family protein [Campylobacter jejuni subsp. jejuni CF93-6]
gi|86152315|ref|ZP_01070526.1| NifU family protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|86152773|ref|ZP_01070978.1| NifU family protein [Campylobacter jejuni subsp. jejuni HB93-13]
gi|88596032|ref|ZP_01099269.1| NifU family protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|85840133|gb|EAQ57391.1| NifU family protein [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85840804|gb|EAQ58055.1| NifU family protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|85843658|gb|EAQ60868.1| NifU family protein [Campylobacter jejuni subsp. jejuni HB93-13]
gi|88190873|gb|EAQ94845.1| NifU family protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|315928875|gb|EFV08137.1| nifU-like domain protein [Campylobacter jejuni subsp. jejuni 305]
Length = 89
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD ++ +K L+ + P + RDGG + F G ++GIV++ + GAC GC S+ TLKYG+
Sbjct: 4 SDEELINPVKASLEKSL-PMLERDGGGLEFLGIKNGIVYVHLIGACKGCASSGTTLKYGL 62
Query: 173 ANILN 177
L
Sbjct: 63 ERQLK 67
>gi|315187331|gb|EFU21087.1| nitrogen-fixing NifU domain protein [Spirochaeta thermophila DSM
6578]
Length = 74
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 127 NRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
N +RPA+ DGGDI + + G+V + + GAC GCP + TLK GV L +PE+
Sbjct: 11 NEIRPALKADGGDIQLLEVTEQGVVKVRLTGACHGCPMSQITLKQGVEAYLKRKLPEISS 70
Query: 186 IRTV 189
+ V
Sbjct: 71 VEAV 74
>gi|117924033|ref|YP_864650.1| NifU domain-containing protein [Magnetococcus sp. MC-1]
gi|117607789|gb|ABK43244.1| nitrogen-fixing NifU domain protein [Magnetococcus sp. MC-1]
Length = 76
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 129 VRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
+RP + RDGGD+ F D +V + +RGAC CP A TLK G+ ++ +PEV +
Sbjct: 12 IRPMLQRDGGDVEFVDLTEDNVVQVRLRGACGSCPGAMMTLKGGIERLMKERIPEVHSVE 71
Query: 188 TV 189
V
Sbjct: 72 NV 73
>gi|328949227|ref|YP_004366564.1| nitrogen-fixing NifU domain-containing protein [Treponema
succinifaciens DSM 2489]
gi|328449551|gb|AEB15267.1| nitrogen-fixing NifU domain-containing protein [Treponema
succinifaciens DSM 2489]
Length = 78
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGV 172
D A++ ++KE L+ RP + DGGD+ F D V L + GAC CP A+ TLK G+
Sbjct: 3 DEALIAKVKETLE-AFRPQLNADGGDMEFINIDDENKVHLKLTGACGSCPMATMTLKMGI 61
Query: 173 ANILNHFVPEVKDI 186
L PE+ ++
Sbjct: 62 ERYLKETCPEISEV 75
>gi|152990000|ref|YP_001355722.1| hypothetical protein NIS_0251 [Nitratiruptor sp. SB155-2]
gi|151421861|dbj|BAF69365.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 100
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD + +++V++ +++P +A DGGDI G ++G VF+ + GAC GC ++ TLKYGV
Sbjct: 6 SDEDLYPAVEKVIE-KIKPMLALDGGDIKLLGVKNGRVFVQLGGACVGCSASGNTLKYGV 64
Query: 173 ANILN 177
L
Sbjct: 65 ERQLK 69
>gi|310643822|ref|YP_003948580.1| nifu-like protein [Paenibacillus polymyxa SC2]
gi|309248772|gb|ADO58339.1| NifU-like protein [Paenibacillus polymyxa SC2]
Length = 81
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 113 SDSAVVQRIKEVLD--NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
S++ VQ EV D +++RP + RDGGD+ DGIV L + GAC CPS++ TLK
Sbjct: 2 SEAQSVQMYDEVADVLDKLRPFLQRDGGDVELVDVEDGIVKLKLVGACGSCPSSTITLKA 61
Query: 171 GVANIL 176
G+ L
Sbjct: 62 GIERAL 67
>gi|293402218|ref|ZP_06646356.1| NifU domain protein [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304325|gb|EFE45576.1| NifU domain protein [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 78
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
++RP + RDGGD+ + + DGIV + + GAC GC S +TLK G+ I+ V V ++
Sbjct: 13 EKIRPYIQRDGGDVEYVSFTDGIVRVRLLGACVGCMSIGDTLKDGIEAIIMDEVAGVSEV 72
Query: 187 R 187
R
Sbjct: 73 R 73
>gi|225848086|ref|YP_002728249.1| hypothetical protein SULAZ_0254 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643275|gb|ACN98325.1| conserved domain protein [Sulfurihydrogenibium azorense Az-Fu1]
Length = 79
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
Q+++EVL+ +VRP + DGGD+ + DG V++ + G+CSGC + TLK GV L
Sbjct: 6 QKVEEVLE-QVRPYLRFDGGDVELVDVSEDGTVYVRLMGSCSGCAMSLWTLKGGVEARLK 64
Query: 178 HFVPEVKDIRTV 189
+PEVK++ V
Sbjct: 65 QAIPEVKEVVAV 76
>gi|237756555|ref|ZP_04585079.1| putative conserved hypothetical protein [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691283|gb|EEP60367.1| putative conserved hypothetical protein [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 78
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
Q+++EVL+ +VRP + DGGD+ DG V++ + GACSGC + TLK GV L
Sbjct: 6 QKVEEVLE-QVRPYLRFDGGDVELVDVGEDGTVYVRLMGACSGCHMSLWTLKGGVEARLK 64
Query: 178 HFVPEVKDIRTV 189
+PEVK++ V
Sbjct: 65 QAIPEVKEVVAV 76
>gi|2688826|gb|AAB88877.1| putative NifU protein [Prunus armeniaca]
Length = 76
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH-FVPEVKDIR 187
VRP + DGGD+ DG+V L ++GAC CPS++ T+K G+ +L F +KDI+
Sbjct: 14 VRPYLIADGGDVDVVSVEDGVVSLKLQGACGSCPSSTTTMKMGIERVLKEKFGDALKDIQ 73
Query: 188 TV 189
V
Sbjct: 74 QV 75
>gi|148263012|ref|YP_001229718.1| NifU domain-containing protein [Geobacter uraniireducens Rf4]
gi|146396512|gb|ABQ25145.1| nitrogen-fixing NifU domain protein [Geobacter uraniireducens Rf4]
Length = 73
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+++ +K+VLD +RP + DGGD+ + + DG+V + + GAC CP ++ TLK G+
Sbjct: 1 MIEEVKKVLD-LIRPNLQADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERT 59
Query: 176 LNHFVPEVKDIRTV 189
L VP VK++ +V
Sbjct: 60 LKEKVPGVKEVISV 73
>gi|57505611|ref|ZP_00371538.1| NifU domain protein [Campylobacter upsaliensis RM3195]
gi|57016158|gb|EAL52945.1| NifU domain protein [Campylobacter upsaliensis RM3195]
Length = 90
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD ++ +K+ L+ + P + RDGG + F G ++GIV++ + GAC GC S+S TLKY +
Sbjct: 5 SDEELINPVKKSLEKSL-PILERDGGGLEFLGVKNGIVYVHLIGACKGCASSSITLKYSL 63
Query: 173 ANILNHFV-PEVKDI 186
L + PE+ I
Sbjct: 64 ERQLKMDIHPEISII 78
>gi|294660416|ref|NP_853167.2| hypothetical protein MGA_0005 [Mycoplasma gallisepticum str.
R(low)]
gi|284812075|gb|AAP56735.2| conserved hypothetical protein [Mycoplasma gallisepticum str.
R(low)]
gi|284930649|gb|ADC30588.1| conserved hypothetical protein [Mycoplasma gallisepticum str.
R(high)]
Length = 99
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 133 VARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+ RDGGD+ F+GY GIV + + G C GC T K GV IL +PEVK +
Sbjct: 23 IKRDGGDLSFEGYEKGIVTIKLLGNCDGCSLVDMTYKDGVETILKAEIPEVKSV 76
>gi|290967833|ref|ZP_06559386.1| NifU-like protein [Megasphaera genomosp. type_1 str. 28L]
gi|290782192|gb|EFD94767.1| NifU-like protein [Megasphaera genomosp. type_1 str. 28L]
Length = 94
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 43/68 (63%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+++ +L ++RP++ GG++ Y DGI+ + + G CSGCPSA+ T + + I+
Sbjct: 6 QLETLLAEKIRPSLQAHGGNVEIISYTDGILRIRLTGRCSGCPSATLTTEEFINQIVQTA 65
Query: 180 VPEVKDIR 187
P+V+++R
Sbjct: 66 FPDVREVR 73
>gi|256372488|ref|YP_003110312.1| nitrogen-fixing NifU domain protein [Acidimicrobium ferrooxidans
DSM 10331]
gi|256009072|gb|ACU54639.1| nitrogen-fixing NifU domain protein [Acidimicrobium ferrooxidans
DSM 10331]
Length = 204
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
S + +R+ +L +V PA+A GG G D + ++ M G C GC AS TL G+A
Sbjct: 114 SDLARRVDSILQEQVNPAIAAHGGYAELVGVVDEVAYVLMGGGCQGCGLASATLTQGIAV 173
Query: 175 ILNHFVPEVKDI 186
+ VPE++D+
Sbjct: 174 AIRDAVPEIRDV 185
>gi|157415859|ref|YP_001483115.1| NifU family protein [Campylobacter jejuni subsp. jejuni 81116]
gi|157386823|gb|ABV53138.1| NifU-like protein [Campylobacter jejuni subsp. jejuni 81116]
gi|307748496|gb|ADN91766.1| NifU family protein [Campylobacter jejuni subsp. jejuni M1]
gi|315931685|gb|EFV10646.1| nifU-like domain protein [Campylobacter jejuni subsp. jejuni 327]
Length = 90
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD ++ +K L+ + P + RDGG + F G ++G+V++ + GAC GC S+ TLKYG+
Sbjct: 5 SDEELINPVKASLEKSL-PMLERDGGGLEFLGIKNGVVYVHLIGACKGCASSGTTLKYGL 63
Query: 173 ANILN 177
L
Sbjct: 64 ERQLK 68
>gi|218886099|ref|YP_002435420.1| nitrogen-fixing NifU domain protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757053|gb|ACL07952.1| nitrogen-fixing NifU domain protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 77
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
A+ +R++ LD +VRP + DGGD+ + + DG+V + + GAC GCP + +TLK GV
Sbjct: 4 AIHERVQAALD-KVRPYLQGDGGDVELVEITADGVVRVRLTGACKGCPMSQQTLKGGVER 62
Query: 175 ILNHFVPEVKDIRTV 189
++ V EVK + V
Sbjct: 63 MVLKEVAEVKRVEAV 77
>gi|291333447|gb|ADD93149.1| nitrogen fixing NifU-like protein [uncultured archaeon
MedDCM-OCT-S05-C57]
Length = 160
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 14/147 (9%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I+ E T +P +F+ VL + F + +PLA R+ ++P IA V +T
Sbjct: 8 IRGEPTADPQKCRFVLEAEVLSRSPVSFDRESDTSKAPLAERLLALPYIAGVSISGSAVT 67
Query: 63 VGKDQYD-WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
+ D + W + + G+I E +G+P + ++ D+G D ++
Sbjct: 68 LTGDNVESWPAIGKEIGGVIREQIKTGEPAVEE------EVMDIGDADLF-------TQV 114
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDG 148
++ N V P++A GG I DG
Sbjct: 115 NLLIKNDVNPSIASHGGTITLHSVNDG 141
>gi|205355651|ref|ZP_03222421.1| NifU protein [Campylobacter jejuni subsp. jejuni CG8421]
gi|205346428|gb|EDZ33061.1| NifU protein [Campylobacter jejuni subsp. jejuni CG8421]
Length = 90
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD ++ +K L+ + P + RDGG + F G ++GIV++ + GAC GC S+ TLKYG+
Sbjct: 5 SDEELINPVKASLEKSL-PMLERDGGGLEFLGIKNGIVYVHLIGACKGCVSSGTTLKYGL 63
>gi|224064633|ref|XP_002301529.1| predicted protein [Populus trichocarpa]
gi|222843255|gb|EEE80802.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
Q + VL+ VRP + DGG++ DG++ L ++GAC CPS++ T+K G+ +L
Sbjct: 73 QNVDLVLE-EVRPYLIADGGNVDVVSVEDGVISLKLQGACGDCPSSTTTMKMGIERVLKE 131
Query: 179 -FVPEVKDIRTV 189
F +KDIR V
Sbjct: 132 KFGDAIKDIRQV 143
>gi|254422508|ref|ZP_05036226.1| hypothetical protein S7335_2660 [Synechococcus sp. PCC 7335]
gi|196189997|gb|EDX84961.1| hypothetical protein S7335_2660 [Synechococcus sp. PCC 7335]
Length = 79
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+++VLD +RP + DGG++ IV L ++GAC CPS++ TL+ G+ L F+
Sbjct: 11 VEKVLDE-LRPYLMADGGNVELVELDGPIVKLRLQGACGSCPSSAMTLRMGIERRLREFI 69
Query: 181 PEVKDIRTV 189
PE+ +I V
Sbjct: 70 PEIAEIEQV 78
>gi|257459224|ref|ZP_05624343.1| NifU family protein [Campylobacter gracilis RM3268]
gi|257443609|gb|EEV18733.1| NifU family protein [Campylobacter gracilis RM3268]
Length = 88
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+D ++ +++ L+ +RP + DGGD+ G ++G+V++ + G C GC ++S+TLKYGV
Sbjct: 5 TDEELLAPVQDSLE-LIRPMLQNDGGDMKLLGIKNGVVYVRLTGHCHGCAASSQTLKYGV 63
Query: 173 ANIL 176
L
Sbjct: 64 ERQL 67
>gi|206890081|ref|YP_002249266.1| thioredoxin family protein [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206742019|gb|ACI21076.1| thioredoxin family protein [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 74
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
++++VL ++R + DGG+I +D IV++ ++GAC CP A+ TLK V L
Sbjct: 6 KVEQVL-GKIRVGLMADGGNIDLVDIKDNIVYVKLKGACGTCPMATLTLKNWVEKTLKSE 64
Query: 180 VPEVKDIRTV 189
+PEVK++ V
Sbjct: 65 IPEVKEVVAV 74
>gi|118578775|ref|YP_900025.1| NifU domain-containing protein [Pelobacter propionicus DSM 2379]
gi|118501485|gb|ABK97967.1| nitrogen-fixing NifU domain protein [Pelobacter propionicus DSM
2379]
Length = 74
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 128 RVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+VRPA+ DGGD+ + + DGIV + ++GAC CP ++ TLK G+ + +P VK++
Sbjct: 11 QVRPALQADGGDVELVEVTADGIVKVRLKGACGSCPMSTMTLKMGIERAMKEQIPAVKEV 70
Query: 187 RTV 189
V
Sbjct: 71 VQV 73
>gi|218438992|ref|YP_002377321.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 7424]
gi|218171720|gb|ACK70453.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 7424]
Length = 81
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + +++VLD +RP + DGG++ IV L ++GAC CPS++ TLK G
Sbjct: 4 ETLPLTTENVEQVLDE-LRPYLMADGGNVELVEIDGPIVKLRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDI 186
+ L ++PE+ ++
Sbjct: 63 IERRLREYIPEIAEV 77
>gi|124009117|ref|ZP_01693800.1| conserved domain protein [Microscilla marina ATCC 23134]
gi|123985331|gb|EAY25251.1| conserved domain protein [Microscilla marina ATCC 23134]
Length = 84
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+++R+ LD +RP + DGGD+ V + DG+V L + G+C CP ++ TLK G+
Sbjct: 7 MIERVDNALDT-IRPYLKTDGGDVKVLEVSEDGVVKLELMGSCGSCPMSAMTLKAGIEES 65
Query: 176 LNHFVPEVKDIRTV 189
+ VPE+ + +
Sbjct: 66 IRKAVPEITAVEAI 79
>gi|89100547|ref|ZP_01173407.1| nitrogen fixation protein (NifU protein) [Bacillus sp. NRRL
B-14911]
gi|89084734|gb|EAR63875.1| nitrogen fixation protein (NifU protein) [Bacillus sp. NRRL
B-14911]
Length = 77
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++ ++EVLD ++RP + RDGGD DGIV L + GAC CPS++ TLK G+ L
Sbjct: 5 IISDVQEVLD-KLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIERAL 63
>gi|110738975|dbj|BAF01408.1| nitrogen fixation like protein [Arabidopsis thaliana]
gi|227206276|dbj|BAH57193.1| AT4G25910 [Arabidopsis thaliana]
Length = 155
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD VRP++ DGG++ +V L ++GAC CPS+S TLK G+ + L
Sbjct: 6 ENVERVLDE-VRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRD 64
Query: 179 FVPEVKDI 186
+PE+ +
Sbjct: 65 KIPEIMSV 72
>gi|303245787|ref|ZP_07332070.1| nitrogen-fixing NifU domain protein [Desulfovibrio fructosovorans
JJ]
gi|302493050|gb|EFL52915.1| nitrogen-fixing NifU domain protein [Desulfovibrio fructosovorans
JJ]
Length = 73
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 128 RVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
++RP++ DGGD+ DG IV + + GAC GCP + TLK G+ IL VP VK +
Sbjct: 11 KIRPSLQADGGDVELVEVTDGGIVKVRLTGACKGCPMSQMTLKNGIERILMQSVPGVKAV 70
Query: 187 RTV 189
V
Sbjct: 71 EAV 73
>gi|148907013|gb|ABR16650.1| unknown [Picea sitchensis]
Length = 465
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH-FVPEVKD 185
N VRP + DGG++ DG++ L ++GAC CPS++ T+K G+ +L F +K+
Sbjct: 329 NDVRPYLVADGGNVEVASVEDGVISLRLQGACGTCPSSTTTMKMGIERVLKEKFGDVLKE 388
Query: 186 IRTV 189
IR V
Sbjct: 389 IRQV 392
>gi|157736773|ref|YP_001489456.1| NifU-like protein [Arcobacter butzleri RM4018]
gi|315635952|ref|ZP_07891213.1| NifU family protein [Arcobacter butzleri JV22]
gi|157698627|gb|ABV66787.1| conserved hypothetical NifU-like protein [Arcobacter butzleri
RM4018]
gi|315479736|gb|EFU70408.1| NifU family protein [Arcobacter butzleri JV22]
Length = 92
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+D + + +++N++ P +ARDGG I ++ +F+ ++GAC GC ++S TLKY V
Sbjct: 5 TDEDLQNPVSSIIENKISPMLARDGGAIKLLAIKNARIFVQLQGACVGCSASSSTLKYIV 64
>gi|224373701|ref|YP_002608073.1| NifU family protein [Nautilia profundicola AmH]
gi|223588484|gb|ACM92220.1| NifU family protein [Nautilia profundicola AmH]
Length = 98
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
S+ + + + VLD VRP + DGGD+ R IVF+ ++G C GC SA TLKYG+
Sbjct: 7 SNEDLKEAVAGVLD-EVRPMLQMDGGDVTLIDVRKPIVFVQLQGGCVGCASAGATLKYGI 65
Query: 173 ANILNHFV-PEV 183
L + PE+
Sbjct: 66 EKALKEKIHPEL 77
>gi|218778425|ref|YP_002429743.1| nitrogen-fixing NifU domain protein [Desulfatibacillum alkenivorans
AK-01]
gi|218759809|gb|ACL02275.1| nitrogen-fixing NifU domain protein [Desulfatibacillum alkenivorans
AK-01]
Length = 74
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++K +D +RP + RDGGD+ + + DG+V + + GAC GCP + +TLK G+ +
Sbjct: 3 EQVKAAIDE-IRPTLQRDGGDVELVEVGDDGVVKVRLVGACKGCPMSQQTLKNGIEKYMK 61
Query: 178 HFVPEVKDIRTV 189
+P VK + V
Sbjct: 62 KNIPGVKSVEGV 73
>gi|253575294|ref|ZP_04852632.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251845291|gb|EES73301.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 81
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ EVLD ++RP + RDGGD+ DGIV L + GAC CPS++ TLK G+ L
Sbjct: 12 EVLEVLD-KLRPFLQRDGGDVELVDVEDGIVKLKLMGACGSCPSSTITLKAGIERAL 67
>gi|85859635|ref|YP_461837.1| nifU-like domain-containing protein [Syntrophus aciditrophicus SB]
gi|85722726|gb|ABC77669.1| nifU-like domain protein [Syntrophus aciditrophicus SB]
Length = 73
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 120 RIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+++E +D VRP + DGGD+ + DG+V + + GAC GC + TLK G+ L
Sbjct: 4 KVQEAIDQ-VRPGLQADGGDVELVDVTEDGVVKVRLVGACRGCAMSQMTLKMGIERFLKE 62
Query: 179 FVPEVKDIRTV 189
+PEVK++ V
Sbjct: 63 RIPEVKEVVAV 73
>gi|269216053|ref|ZP_06159907.1| NifU family protein [Slackia exigua ATCC 700122]
gi|269130312|gb|EEZ61390.1| NifU family protein [Slackia exigua ATCC 700122]
Length = 76
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+R+ VLD VRP++ DGGD+ + DGIV + ++GAC+GC +S T+ GV IL
Sbjct: 6 KRVSRVLD-MVRPSLQADGGDLELVDITDDGIVRVRLQGACNGCALSSLTIANGVERILK 64
Query: 178 HFVPEVKDI 186
VPEV +
Sbjct: 65 EHVPEVAKV 73
>gi|18416645|ref|NP_567735.1| NFU3; structural molecule [Arabidopsis thaliana]
gi|75147908|sp|Q84RQ7|NIFU3_ARATH RecName: Full=NifU-like protein 3, chloroplastic; Short=AtCNfu3;
Short=AtCnfU-IVa; Flags: Precursor
gi|28207820|emb|CAD55560.1| NFU3 protein [Arabidopsis thaliana]
gi|88196759|gb|ABD43022.1| At4g25910 [Arabidopsis thaliana]
gi|222423670|dbj|BAH19802.1| AT4G25910 [Arabidopsis thaliana]
gi|332659732|gb|AEE85132.1| NifU-like protein 3 [Arabidopsis thaliana]
Length = 236
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD VRP++ DGG++ +V L ++GAC CPS+S TLK G+ + L
Sbjct: 87 ENVERVLDE-VRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRD 145
Query: 179 FVPEVKDI 186
+PE+ +
Sbjct: 146 KIPEIMSV 153
>gi|322420167|ref|YP_004199390.1| nitrogen-fixing NifU domain-containing protein [Geobacter sp. M18]
gi|320126554|gb|ADW14114.1| nitrogen-fixing NifU domain protein [Geobacter sp. M18]
Length = 73
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ +K +L+N +RPA+ DGGD+ + + DG+V + + GAC CP ++ TLK G+ +
Sbjct: 3 EEVKAILEN-IRPALQADGGDVELVEVTDDGVVKVRLVGACGHCPMSTMTLKMGIERTIK 61
Query: 178 HFVPEVKDIRTV 189
+P VK++ +V
Sbjct: 62 EKIPGVKEVVSV 73
>gi|4538920|emb|CAB39656.1| nitrogen fixation like protein [Arabidopsis thaliana]
gi|7269442|emb|CAB79446.1| nitrogen fixation like protein [Arabidopsis thaliana]
Length = 224
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD VRP++ DGG++ +V L ++GAC CPS+S TLK G+ + L
Sbjct: 75 ENVERVLDE-VRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRD 133
Query: 179 FVPEVKDI 186
+PE+ +
Sbjct: 134 KIPEIMSV 141
>gi|297803520|ref|XP_002869644.1| hypothetical protein ARALYDRAFT_492226 [Arabidopsis lyrata subsp.
lyrata]
gi|297315480|gb|EFH45903.1| hypothetical protein ARALYDRAFT_492226 [Arabidopsis lyrata subsp.
lyrata]
Length = 238
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD VRP++ DGG++ +V L ++GAC CPS+S TLK G+ + L
Sbjct: 89 ENVERVLDE-VRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRD 147
Query: 179 FVPEVKDI 186
+PE+ +
Sbjct: 148 KIPEIMSV 155
>gi|222054851|ref|YP_002537213.1| nitrogen-fixing NifU domain protein [Geobacter sp. FRC-32]
gi|221564140|gb|ACM20112.1| nitrogen-fixing NifU domain protein [Geobacter sp. FRC-32]
Length = 73
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+++ +K+VLD +RP + DGGD+ + + DG+V + + GAC CP ++ TLK G+
Sbjct: 1 MIEDVKKVLDT-IRPNLQADGGDVELVEVGEDGVVKVKLVGACGHCPMSTMTLKMGIERT 59
Query: 176 LNHFVPEVKDIRTV 189
L VP VK++ +V
Sbjct: 60 LKEKVPGVKEVISV 73
>gi|118475450|ref|YP_891271.1| NifU family protein [Campylobacter fetus subsp. fetus 82-40]
gi|118414676|gb|ABK83096.1| NifU family protein [Campylobacter fetus subsp. fetus 82-40]
Length = 88
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD +++ +KE L + P + +DGG + G ++G+V++ + G C GC ++S+TLKYGV
Sbjct: 5 SDEELLEPVKESL-KVIMPMLEQDGGGMELLGIKNGVVYVRLTGHCHGCAASSQTLKYGV 63
Query: 173 ANILN 177
L
Sbjct: 64 ERQLK 68
>gi|21554503|gb|AAM63593.1| nitrogen fixation like protein [Arabidopsis thaliana]
Length = 236
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD VRP++ DGG++ +V L ++GAC CPS+S TLK G+ + L
Sbjct: 87 ENVERVLDE-VRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRD 145
Query: 179 FVPEVKDI 186
+PE+ +
Sbjct: 146 KIPEIMSV 153
>gi|251798821|ref|YP_003013552.1| nitrogen-fixing NifU domain protein [Paenibacillus sp. JDR-2]
gi|247546447|gb|ACT03466.1| nitrogen-fixing NifU domain protein [Paenibacillus sp. JDR-2]
Length = 80
Score = 54.3 bits (129), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 123 EVLD--NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
EVLD +++RP + RDGGD+ DGIV L + GAC CPS++ TLK G+ L
Sbjct: 11 EVLDVLDKLRPFLQRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERAL 66
>gi|284929666|ref|YP_003422188.1| thioredoxin-like protein [cyanobacterium UCYN-A]
gi|284810110|gb|ADB95807.1| thioredoxin-like protein [cyanobacterium UCYN-A]
Length = 76
Score = 54.3 bits (129), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+++VLD +RP + DGG++ IV L ++GAC CPS++ TLK G+ L +
Sbjct: 8 VEQVLDE-LRPYLIADGGNVELVEIDGAIVKLRLQGACGSCPSSTMTLKMGIERRLKEMI 66
Query: 181 PEVKDI 186
PEV ++
Sbjct: 67 PEVSEV 72
>gi|283953743|ref|ZP_06371274.1| NifU family protein [Campylobacter jejuni subsp. jejuni 414]
gi|283794784|gb|EFC33522.1| NifU family protein [Campylobacter jejuni subsp. jejuni 414]
Length = 90
Score = 54.3 bits (129), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD ++ +K L+ + P + RDGG + F G ++G+V++ + GAC GC S+ TLKYG+
Sbjct: 5 SDEELINPVKASLEKSL-PMLERDGGGLEFLGIKNGVVYVHLIGACKGCTSSGITLKYGL 63
Query: 173 ANILN 177
L
Sbjct: 64 ERQLK 68
>gi|157693637|ref|YP_001488099.1| iron-sulfur assembly protein [Bacillus pumilus SAFR-032]
gi|194015287|ref|ZP_03053903.1| conserved domain protein [Bacillus pumilus ATCC 7061]
gi|157682395|gb|ABV63539.1| possible iron-sulfur assembly protein [Bacillus pumilus SAFR-032]
gi|194012691|gb|EDW22257.1| conserved domain protein [Bacillus pumilus ATCC 7061]
Length = 78
Score = 54.3 bits (129), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+++EVLD ++RP + RDGGD DGIV L + GAC CPS++ TLK G+ L
Sbjct: 9 QVQEVLD-KLRPFLLRDGGDCELVDIEDGIVKLRLLGACGSCPSSTITLKAGIERAL 64
>gi|308272822|emb|CBX29426.1| hypothetical protein N47_J04070 [uncultured Desulfobacterium sp.]
Length = 61
Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
+RP + +DGGD+ +GIV + ++GAC+GCP + TLK G+ +L VP VK +
Sbjct: 1 MRPMLQKDGGDVEIVDVSEGIVKVRLQGACAGCPMSQMTLKNGIEKLLMQDVPGVKSVVA 60
Query: 189 V 189
V
Sbjct: 61 V 61
>gi|242277615|ref|YP_002989744.1| Fe-S cluster assembly protein NifU [Desulfovibrio salexigens DSM
2638]
gi|242120509|gb|ACS78205.1| Fe-S cluster assembly protein NifU [Desulfovibrio salexigens DSM
2638]
Length = 279
Score = 54.3 bits (129), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
Q + +V+D +RPA+ +DGGDI V +S+RGAC GCPS+ TLK V L
Sbjct: 209 QLVTKVIDEEIRPALNKDGGDIELIDIDGHEVIVSLRGACVGCPSSGRTLKDFVERRLKE 268
Query: 179 FV-PEV 183
V PE+
Sbjct: 269 TVEPEI 274
>gi|168037489|ref|XP_001771236.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677477|gb|EDQ63947.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 165
Score = 54.3 bits (129), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V+ + +VLD VRP + DGG++ +DG+V L ++GAC CPS++ T+K G+ +L
Sbjct: 24 VENVDKVLD-EVRPYLIADGGNVEVVAVKDGVVSLRLQGACGTCPSSTSTMKMGIERVL 81
>gi|255582605|ref|XP_002532084.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
gi|223528244|gb|EEF30298.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
Length = 220
Score = 54.3 bits (129), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD VRP + DGG++V +V L ++GAC CPS++ TLK G+ L
Sbjct: 72 ENVEKVLDE-VRPGLMADGGNVVLHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRD 130
Query: 179 FVPEVKDIRTV 189
+PE+ + +
Sbjct: 131 KIPEIMAVEQI 141
>gi|270308880|ref|YP_003330938.1| NifU domain protein [Dehalococcoides sp. VS]
gi|270154772|gb|ACZ62610.1| NifU domain protein [Dehalococcoides sp. VS]
Length = 72
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++++++ VLD ++RPA+ DGG++ DG+V + + GAC+GCP ++ TLK G+ IL
Sbjct: 1 MLEKVEAVLD-KIRPALEADGGNVELVDVVDGVVKVKLVGACAGCPMSTMTLKNGIERIL 59
Query: 177 NHFVPEVKDI 186
+PEVK++
Sbjct: 60 KREIPEVKEV 69
>gi|329769819|ref|ZP_08261220.1| hypothetical protein HMPREF0433_00984 [Gemella sanguinis M325]
gi|328838181|gb|EGF87799.1| hypothetical protein HMPREF0433_00984 [Gemella sanguinis M325]
Length = 84
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
++RP + DGGDI F ++DGI+ L +G C+ C + T+K+ + + +PEVK +
Sbjct: 17 EKIRPKLIMDGGDIEFVNFKDGILKLRFKGECAHCELSHITMKFAIEKNILEKIPEVKKV 76
Query: 187 RTV 189
V
Sbjct: 77 TEV 79
>gi|163781905|ref|ZP_02176905.1| nifU-like domain protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159883125|gb|EDP76629.1| nifU-like domain protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 87
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ +++VLD +RPA+ DGGD+ + DG V + + GACSGC + TLK G+ L
Sbjct: 7 EEVEKVLDE-IRPALRFDGGDVELVDIQEDGTVLVRLVGACSGCGMSVLTLKAGIERALK 65
Query: 178 HFVPEVKDIRTV 189
PE+K+++ V
Sbjct: 66 QKFPEIKEVKDV 77
>gi|254415273|ref|ZP_05029035.1| hypothetical protein MC7420_2699 [Microcoleus chthonoplastes PCC
7420]
gi|196178079|gb|EDX73081.1| hypothetical protein MC7420_2699 [Microcoleus chthonoplastes PCC
7420]
Length = 84
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD +RP + DGG++ IV L ++GAC CPS++ TLK G+ L
Sbjct: 14 ENVEAVLDE-LRPYLMADGGNVDLVEIDGPIVKLRLQGACGSCPSSAMTLKMGIERRLRE 72
Query: 179 FVPEVKDIRTV 189
F+PE+ ++ V
Sbjct: 73 FIPEIVEVEQV 83
>gi|325954760|ref|YP_004238420.1| nitrogen-fixing NifU domain-containing protein [Weeksella virosa
DSM 16922]
gi|323437378|gb|ADX67842.1| nitrogen-fixing NifU domain-containing protein [Weeksella virosa
DSM 16922]
Length = 93
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
++ ++ + + LD +RP + DGGDI +D +V + ++GAC+ C TLK GV
Sbjct: 2 NTELIDNVHKALD-EIRPFLNSDGGDIELVEVKDNVVKVRLKGACTSCSVNQMTLKAGVE 60
Query: 174 NILNHFVPEV 183
+ FVPE+
Sbjct: 61 TTVKKFVPEI 70
>gi|309389827|gb|ADO77707.1| nitrogen-fixing NifU domain protein [Halanaerobium praevalens DSM
2228]
Length = 73
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 127 NRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
+++RP++ DGGD+ + + GIV + + GACSGCP ++ T+K G+ L V VK+
Sbjct: 10 DKIRPSLQADGGDVELIEVTEAGIVKVKLLGACSGCPMSTLTIKNGIEKTLKQNVEGVKE 69
Query: 186 IRTV 189
+++V
Sbjct: 70 VQSV 73
>gi|323453984|gb|EGB09855.1| hypothetical protein AURANDRAFT_6483 [Aureococcus anophagefferens]
Length = 114
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
E++ + +RP + DGG++ G +V L + GAC CPS++ T+K G+ L +PE
Sbjct: 11 ELILDELRPYLMSDGGNVRIAGIEGPVVKLELEGACGTCPSSTMTMKMGLERRLKEAIPE 70
Query: 183 VKDI 186
+ D+
Sbjct: 71 ISDV 74
>gi|187250677|ref|YP_001875159.1| thioredoxin-like protein [Elusimicrobium minutum Pei191]
gi|186970837|gb|ACC97822.1| Thioredoxin-like protein [Elusimicrobium minutum Pei191]
Length = 74
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILN 177
+I+EV+ +++P + DGGD+ F + + G V++S++G C GCP+A TLK + +
Sbjct: 4 KIEEVI-AKIKPVLQADGGDLEFVSFDENTGTVYVSLKGRCGGCPAAQMTLKAVIERKIM 62
Query: 178 HFVPEVKDIRTV 189
+PEVK + V
Sbjct: 63 QEIPEVKAVERV 74
>gi|219120702|ref|XP_002181084.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407800|gb|EEC47736.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 225
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
++ VLD +RP + +DGG+++ +V L ++GAC CPS+++T+K G+ L +
Sbjct: 76 VEAVLDE-MRPYLIQDGGNVIISDIDGPVVKLELQGACGTCPSSTQTMKMGLERGLREKI 134
Query: 181 PEVKDI 186
PE++++
Sbjct: 135 PEIQEV 140
>gi|124360086|gb|ABN08102.1| Nitrogen-fixing NifU, C-terminal [Medicago truncatula]
Length = 242
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD VRP + DGG++ +V L ++GAC CPS++ TLK G+ L
Sbjct: 94 ENVEKVLDE-VRPGLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRD 152
Query: 179 FVPEVKDIRTV 189
+PE+ ++ +
Sbjct: 153 KIPEILEVEQI 163
>gi|294501686|ref|YP_003565386.1| NifU-like domain-containing protein [Bacillus megaterium QM B1551]
gi|295707034|ref|YP_003600109.1| NifU-like domain-containing protein [Bacillus megaterium DSM 319]
gi|294351623|gb|ADE71952.1| NifU-like domain protein [Bacillus megaterium QM B1551]
gi|294804693|gb|ADF41759.1| NifU-like domain protein [Bacillus megaterium DSM 319]
Length = 76
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
S + ++++EVL+ ++RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 2 SEMHEQVQEVLE-KLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIER 60
Query: 175 IL 176
L
Sbjct: 61 AL 62
>gi|255632161|gb|ACU16433.1| unknown [Glycine max]
Length = 221
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 124 VLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH-FVPE 182
VLD+ VRP + DGG++ DG+V L + GAC CPS++ T+ G+ +L F
Sbjct: 81 VLDD-VRPYLIADGGNVDVVSVEDGVVSLRLEGACESCPSSTTTMTMGIERVLKEKFGDA 139
Query: 183 VKDIRTV 189
VKDIR V
Sbjct: 140 VKDIRQV 146
>gi|313902071|ref|ZP_07835484.1| nitrogen-fixing NifU domain protein [Thermaerobacter subterraneus
DSM 13965]
gi|313467680|gb|EFR63181.1| nitrogen-fixing NifU domain protein [Thermaerobacter subterraneus
DSM 13965]
Length = 73
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++++ L++ +RPA+ DGGDI +G+V + + GAC GCP + TLK G+ IL
Sbjct: 3 EQVEQALES-IRPAIQMDGGDIELVDVDENGVVRVRLIGACVGCPMSIMTLKAGIERILR 61
Query: 178 HFVPEVKDIRTV 189
VP V D+ V
Sbjct: 62 ERVPGVTDVEAV 73
>gi|255525728|ref|ZP_05392659.1| nitrogen-fixing NifU domain protein [Clostridium carboxidivorans
P7]
gi|296188013|ref|ZP_06856405.1| NifU-like domain protein [Clostridium carboxidivorans P7]
gi|255510551|gb|EET86860.1| nitrogen-fixing NifU domain protein [Clostridium carboxidivorans
P7]
gi|296047139|gb|EFG86581.1| NifU-like domain protein [Clostridium carboxidivorans P7]
Length = 73
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 127 NRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
N++RP + RDGGD+ + DGIV + M+GAC CP A T+K + L VP VK+
Sbjct: 10 NKIRPMLQRDGGDVELVDVSSDGIVSVKMQGACGNCPGAMMTIKGVIEATLKEEVPGVKE 69
Query: 186 I 186
+
Sbjct: 70 V 70
>gi|172035933|ref|YP_001802434.1| NifU-like protein [Cyanothece sp. ATCC 51142]
gi|171697387|gb|ACB50368.1| NifU-like protein [Cyanothece sp. ATCC 51142]
Length = 80
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+++VLD +RP + DGG++ IV L ++GAC CPS++ TLK G+ L +
Sbjct: 12 VEQVLDE-MRPYLMADGGNVELVEIEGPIVKLRLQGACGSCPSSTMTLKMGIERRLREMI 70
Query: 181 PEVKDI 186
PE+ ++
Sbjct: 71 PEIAEV 76
>gi|73749405|ref|YP_308644.1| nifU protein,-like protein [Dehalococcoides sp. CBDB1]
gi|147670014|ref|YP_001214832.1| NifU domain-containing protein [Dehalococcoides sp. BAV1]
gi|289433363|ref|YP_003463236.1| nitrogen-fixing NifU domain protein [Dehalococcoides sp. GT]
gi|73661121|emb|CAI83728.1| nifU protein, homolog [Dehalococcoides sp. CBDB1]
gi|146270962|gb|ABQ17954.1| nitrogen-fixing NifU domain protein [Dehalococcoides sp. BAV1]
gi|288947083|gb|ADC74780.1| nitrogen-fixing NifU domain protein [Dehalococcoides sp. GT]
Length = 72
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++++++ VLD ++RPA+ DGG++ DG+V + + GAC+GCP ++ TLK G+ IL
Sbjct: 1 MLEKVEAVLD-KIRPALEADGGNVELVDVVDGVVKVKLVGACAGCPMSTMTLKNGIERIL 59
Query: 177 NHFVPEVKDI 186
+PE+K++
Sbjct: 60 KREIPEIKEV 69
>gi|303246717|ref|ZP_07332995.1| Fe-S cluster assembly protein NifU [Desulfovibrio fructosovorans
JJ]
gi|302492057|gb|EFL51935.1| Fe-S cluster assembly protein NifU [Desulfovibrio fructosovorans
JJ]
Length = 279
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V+R+ +V+D +RP + +DGGDI V +++RGAC GCP ++ TL V L
Sbjct: 206 VKRVTQVMDEEIRPNLKKDGGDIELLDIEGKTVLVALRGACQGCPVSNVTLTEFVQKRLR 265
Query: 178 HFV 180
V
Sbjct: 266 ELV 268
>gi|313897537|ref|ZP_07831079.1| NifU-like protein [Clostridium sp. HGF2]
gi|312957489|gb|EFR39115.1| NifU-like protein [Clostridium sp. HGF2]
Length = 76
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ IK+ ++ ++RP + RDGGD+ F + DGIV + + GAC GC S +T++ G+ IL
Sbjct: 5 IDEIKQTIE-KIRPYIQRDGGDVEFVSFEDGIVGVRLLGACVGCMSIDDTIQGGIEAIL 62
>gi|224476033|ref|YP_002633639.1| hypothetical protein Sca_0540 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222420640|emb|CAL27454.1| hypothetical protein with NifU domain [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 80
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 124 VLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V+ R+RP + RDGGD DGIV L + GAC+ CPS++ TLK G+ L
Sbjct: 14 VVIERLRPFLLRDGGDCTLIDVEDGIVKLQLHGACNTCPSSTITLKAGIERAL 66
>gi|2183204|gb|AAC33371.1| NifU [Cyanothece sp. PCC 8801]
Length = 294
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV-ANILNHF 179
I+++LD ++PA+A+DGGD+ +V + ++GAC C S+++TLK G+ A +
Sbjct: 226 IQQILDEEIKPALAKDGGDVELFDVEGDLVKVILQGACGSCASSTQTLKMGIEARLRERV 285
Query: 180 VPEV 183
PE+
Sbjct: 286 SPEL 289
>gi|257059658|ref|YP_003137546.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 8802]
gi|256589824|gb|ACV00711.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 8802]
Length = 294
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV-ANILNHF 179
I+++LD ++PA+A+DGGD+ +V + ++GAC C S+++TLK G+ A +
Sbjct: 226 IQQILDEEIKPALAKDGGDVELFDVEGDLVKVILQGACGSCASSTQTLKMGIEARLRERV 285
Query: 180 VPEV 183
PE+
Sbjct: 286 SPEL 289
>gi|225437626|ref|XP_002278510.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297744011|emb|CBI36981.3| unnamed protein product [Vitis vinifera]
Length = 213
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH-FVPEVKDIR 187
VRP + DGG++ DG++ L ++GAC CPS++ T+ G+ +L F VKDIR
Sbjct: 79 VRPYLISDGGNVDVVSVEDGVISLKLQGACGSCPSSTTTMTMGIERVLKEKFGDAVKDIR 138
Query: 188 TV 189
V
Sbjct: 139 QV 140
>gi|300785684|ref|YP_003765975.1| thioredoxin-like protein [Amycolatopsis mediterranei U32]
gi|299795198|gb|ADJ45573.1| thioredoxin-like protein [Amycolatopsis mediterranei U32]
Length = 172
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+R+ E LD +VRP + GD+ F DG++ L ++G C GCPS++ T KY + ++
Sbjct: 78 ERVTEALD-KVRPYLGSHAGDVEFVEIADGVLRLRLQGTCDGCPSSTVTAKYAIERVVRE 136
Query: 179 FVP 181
P
Sbjct: 137 AAP 139
>gi|225446006|ref|XP_002268218.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297735420|emb|CBI17860.3| unnamed protein product [Vitis vinifera]
Length = 237
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD VRP + DGG++ +V L ++GAC CPS++ TLK G+ L
Sbjct: 88 ENVEKVLDE-VRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRD 146
Query: 179 FVPEVKDIRTV 189
+PE++ + +
Sbjct: 147 KIPEIEAVEQI 157
>gi|218246615|ref|YP_002371986.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 8801]
gi|218167093|gb|ACK65830.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 8801]
Length = 294
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV-ANILNHF 179
I+++LD ++PA+A+DGGD+ +V + ++GAC C S+++TLK G+ A +
Sbjct: 226 IQQILDEEIKPALAKDGGDVELFDVEGDLVKVILQGACGSCASSTQTLKMGIEARLRERV 285
Query: 180 VPEV 183
PE+
Sbjct: 286 SPEL 289
>gi|172058330|ref|YP_001814790.1| NifU domain-containing protein [Exiguobacterium sibiricum 255-15]
gi|171990851|gb|ACB61773.1| nitrogen-fixing NifU domain protein [Exiguobacterium sibiricum
255-15]
Length = 75
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++ EVL+ ++RP + RDGGD+ DGIV L + GAC CPS++ TLK G+ L
Sbjct: 6 QVNEVLE-KLRPFLLRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERAL 61
>gi|119511776|ref|ZP_01630878.1| Nitrogen-fixing NifU-like protein [Nodularia spumigena CCY9414]
gi|119463549|gb|EAW44484.1| Nitrogen-fixing NifU-like protein [Nodularia spumigena CCY9414]
Length = 76
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD +RP + DGG++ IV L ++GAC CPS++ TL+ G+ L
Sbjct: 6 ENVETVLDE-MRPYLMSDGGNVELVELDGPIVKLRLQGACGSCPSSAMTLRMGIERRLKE 64
Query: 179 FVPEVKDIRTV 189
+PE+ +I V
Sbjct: 65 MIPEIAEIEQV 75
>gi|312144147|ref|YP_003995593.1| nitrogen-fixing NifU domain protein [Halanaerobium sp.
'sapolanicus']
gi|311904798|gb|ADQ15239.1| nitrogen-fixing NifU domain protein [Halanaerobium sp.
'sapolanicus']
Length = 73
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ +++ LD ++RP++ DGGD+ + + +GIV + + GACSGCP ++ T+K G+ L
Sbjct: 3 EEVQKYLD-KIRPSLQADGGDVELVEVTEEGIVKVKLLGACSGCPMSTLTIKNGIERTLK 61
Query: 178 HFVPEVKDIRTV 189
V VK+++ V
Sbjct: 62 QNVDGVKEVQPV 73
>gi|302340763|ref|YP_003805969.1| nitrogen-fixing NifU domain protein [Spirochaeta smaragdinae DSM
11293]
gi|301637948|gb|ADK83375.1| nitrogen-fixing NifU domain protein [Spirochaeta smaragdinae DSM
11293]
Length = 77
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++K+ + + +RP++ DGGDI +G V + + GAC+GCP A TLK GV L
Sbjct: 8 KVKKAIQD-IRPSLQADGGDIELVTVGENGKVSVRLTGACNGCPMAQITLKQGVERYLKE 66
Query: 179 FVPEVKDIRTV 189
+PE+K + V
Sbjct: 67 TIPEIKSVDAV 77
>gi|254786162|ref|YP_003073591.1| gluconate transport associated thioredoxin-like protein YhgI
[Teredinibacter turnerae T7901]
gi|259511746|sp|C5BJC0|NFUA_TERTT RecName: Full=Fe/S biogenesis protein nfuA
gi|237684627|gb|ACR11891.1| putative gluconate transport associated thioredoxin-like protein
YhgI [Teredinibacter turnerae T7901]
Length = 194
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
I DS + +I VL N V P +A GG++ + D G+ L G C GC + TLK
Sbjct: 104 ISDDSPIEDKINYVLYNEVNPGLASHGGNVSLERLTDDGMAILRFGGGCQGCSAVDMTLK 163
Query: 170 YGVANILNHFVPEVKDIRTV 189
GV L +PE+ +R V
Sbjct: 164 QGVEKTLMERIPELAGVRDV 183
>gi|159474062|ref|XP_001695148.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
gi|158276082|gb|EDP01856.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
Length = 154
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD VRP + DGG++ F +V L ++GAC CPS++ T+ G+ L
Sbjct: 7 ENVEKVLD-EVRPYLMADGGNVEFMEIDGLVVKLKLQGACGSCPSSTTTMTMGIKRRLME 65
Query: 179 FVPEVKDIRTV 189
+PE+ D+ V
Sbjct: 66 RIPEILDVEQV 76
>gi|110004115|emb|CAK98454.1| hypothetical nitrogen fixation protein [Spiroplasma citri]
Length = 75
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
K+++DN +RP + +DGGDI F ++ IV++ + GAC GC T+K GV I+ +P
Sbjct: 8 KDIIDN-LRPYINQDGGDIEFVEVKNNIVYVRLAGACVGCGLIDSTIKDGVEQIVKQEMP 66
Query: 182 EV 183
++
Sbjct: 67 DI 68
>gi|72383588|ref|YP_292943.1| NifU-like protein [Prochlorococcus marinus str. NATL2A]
gi|124025184|ref|YP_001014300.1| NifU-like protein [Prochlorococcus marinus str. NATL1A]
gi|72003438|gb|AAZ59240.1| NifU-like protein [Prochlorococcus marinus str. NATL2A]
gi|123960252|gb|ABM75035.1| NifU-like protein [Prochlorococcus marinus str. NATL1A]
Length = 81
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + + +++VLD +RP + DGG++ IV + ++GAC CPS++ TLK G
Sbjct: 4 ETLALTTENVEKVLDE-LRPFLMADGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDI 186
+ L +PEV ++
Sbjct: 63 IERKLREMIPEVSEV 77
>gi|302770961|ref|XP_002968899.1| hypothetical protein SELMODRAFT_16556 [Selaginella moellendorffii]
gi|300163404|gb|EFJ30015.1| hypothetical protein SELMODRAFT_16556 [Selaginella moellendorffii]
Length = 170
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 106 GSGDF-IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSA 164
GSG + E+ + + +VLD VRP + DGG++ DG V L ++GAC CPS+
Sbjct: 19 GSGLYSTETYDFTAENVDKVLD-EVRPYLVADGGNVAVVSVADGTVSLELQGACGTCPSS 77
Query: 165 SETLKYGVANILNH----FVPEVKDI 186
+ T+K G+ +L V EV DI
Sbjct: 78 TSTMKMGIERVLREKFGDAVKEVVDI 103
>gi|298492022|ref|YP_003722199.1| nitrogen-fixing NifU domain-containing protein ['Nostoc azollae'
0708]
gi|298233940|gb|ADI65076.1| nitrogen-fixing NifU domain protein ['Nostoc azollae' 0708]
Length = 79
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ ++ VLD +RP + DGG++ IV L ++GAC CPS++ TL+ G+ L
Sbjct: 8 LENVETVLDE-MRPYLMSDGGNVEVVELDGPIVKLRLQGACGSCPSSAMTLRMGIERRLK 66
Query: 178 HFVPEVKDIRTV 189
+PE+ +I V
Sbjct: 67 ELIPEIAEIEQV 78
>gi|332702422|ref|ZP_08422510.1| Fe-S cluster assembly protein NifU [Desulfovibrio africanus str.
Walvis Bay]
gi|332552571|gb|EGJ49615.1| Fe-S cluster assembly protein NifU [Desulfovibrio africanus str.
Walvis Bay]
Length = 285
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYGVANIL 176
+Q + +V+D +RP++ +DGGDI DG+ V +S+RGAC GCPSA TLK V L
Sbjct: 213 MQLVSKVIDEEIRPSLKKDGGDIELIDI-DGLNVVVSLRGACVGCPSAQLTLKQLVERRL 271
Query: 177 NHFV 180
V
Sbjct: 272 RETV 275
>gi|222823154|ref|YP_002574727.1| NifU family protein [Campylobacter lari RM2100]
gi|222538375|gb|ACM63476.1| conserved hypothetical protein, NifU family protein [Campylobacter
lari RM2100]
Length = 91
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD +++ +K L + + DGG + F G ++G+V++ + GAC GCPS+ TLKYG+
Sbjct: 6 SDEELIEPVKASLAKTMH-ILENDGGGLDFLGVKNGVVYVKLTGACHGCPSSGTTLKYGL 64
Query: 173 ANIL 176
L
Sbjct: 65 EKQL 68
>gi|302784600|ref|XP_002974072.1| hypothetical protein SELMODRAFT_58377 [Selaginella moellendorffii]
gi|300158404|gb|EFJ25027.1| hypothetical protein SELMODRAFT_58377 [Selaginella moellendorffii]
Length = 162
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 106 GSGDF-IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSA 164
GSG + E+ + + +VLD VRP + DGG++ DG V L ++GAC CPS+
Sbjct: 8 GSGLYSAETYDFTAENVDKVLD-EVRPYLVADGGNVAVVSVADGTVSLELQGACGTCPSS 66
Query: 165 SETLKYGVANILNH----FVPEVKDI 186
+ T+K G+ +L V EV DI
Sbjct: 67 TSTMKMGIERVLREKFGDAVKEVVDI 92
>gi|226503511|ref|NP_001150793.1| NFU3 [Zea mays]
gi|195641898|gb|ACG40417.1| NFU3 [Zea mays]
Length = 213
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD VRP++ DGG++ +V L ++GAC CPS++ TLK G+ L
Sbjct: 65 ENVEKVLDE-VRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRD 123
Query: 179 FVPEVKDIRTV 189
+P++ ++ +
Sbjct: 124 KIPDILEVEQI 134
>gi|78778799|ref|YP_396911.1| NifU-like protein [Prochlorococcus marinus str. MIT 9312]
gi|123968006|ref|YP_001008864.1| NifU-like protein [Prochlorococcus marinus str. AS9601]
gi|126695776|ref|YP_001090662.1| NifU-like protein [Prochlorococcus marinus str. MIT 9301]
gi|157412831|ref|YP_001483697.1| NifU-like protein [Prochlorococcus marinus str. MIT 9215]
gi|254525524|ref|ZP_05137576.1| NifU domain protein [Prochlorococcus marinus str. MIT 9202]
gi|78712298|gb|ABB49475.1| NifU-like protein [Prochlorococcus marinus str. MIT 9312]
gi|91070321|gb|ABE11238.1| NifU-like protein [uncultured Prochlorococcus marinus clone
HF10-88F10]
gi|123198116|gb|ABM69757.1| NifU-like protein [Prochlorococcus marinus str. AS9601]
gi|126542819|gb|ABO17061.1| NifU-like protein [Prochlorococcus marinus str. MIT 9301]
gi|157387406|gb|ABV50111.1| NifU-like protein [Prochlorococcus marinus str. MIT 9215]
gi|221536948|gb|EEE39401.1| NifU domain protein [Prochlorococcus marinus str. MIT 9202]
Length = 81
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ S + +++VLD +RP + DGG++ IV + ++GAC CPS++ TLK G
Sbjct: 4 ETLSLTNENVEKVLD-ELRPFLISDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDIRTV 189
+ L +PE+ ++ V
Sbjct: 63 IERKLKEMIPEISEVVQV 80
>gi|218282608|ref|ZP_03488846.1| hypothetical protein EUBIFOR_01432 [Eubacterium biforme DSM 3989]
gi|218216479|gb|EEC90017.1| hypothetical protein EUBIFOR_01432 [Eubacterium biforme DSM 3989]
Length = 79
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILN 177
+ + + LD ++RP + DGGDI G + +V++S +GAC GC ASE G+ +L
Sbjct: 8 KAVNDCLD-KIRPYIQHDGGDIELLGVDEFNVVYVSFKGACQGCMMASEDFSSGIKELLL 66
Query: 178 HFVPEVKDIRTV 189
VP ++D+ V
Sbjct: 67 EEVPNIRDVVLV 78
>gi|22298836|ref|NP_682083.1| NifU protein [Thermosynechococcus elongatus BP-1]
gi|22295017|dbj|BAC08845.1| tsl1293 [Thermosynechococcus elongatus BP-1]
Length = 89
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD +RP + DGG++ +V L ++GAC CPS++ TL+ G+ L
Sbjct: 19 ENVEKVLDE-LRPYLMADGGNVELVEIEGPVVRLRLQGACGACPSSTMTLRMGIERKLKE 77
Query: 179 FVPEVKDIRTV 189
+PE+ +++ V
Sbjct: 78 SIPEIAEVQQV 88
>gi|317121652|ref|YP_004101655.1| nitrogen-fixing NifU domain protein [Thermaerobacter marianensis
DSM 12885]
gi|315591632|gb|ADU50928.1| nitrogen-fixing NifU domain protein [Thermaerobacter marianensis
DSM 12885]
Length = 73
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 129 VRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
+RPA+ DGGDI +G+V + + GAC GCP + TLK G+ IL VP V D+
Sbjct: 12 IRPAIQMDGGDIELVDVDENGVVRVRLIGACVGCPMSIMTLKAGIERILRERVPGVTDVE 71
Query: 188 TV 189
V
Sbjct: 72 AV 73
>gi|226493520|ref|NP_001152596.1| LOC100286236 [Zea mays]
gi|195657915|gb|ACG48425.1| NFU3 [Zea mays]
Length = 221
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ + VLD+ VRP + DGG++ DG++ L + GAC CPS++ T+ G+ +L
Sbjct: 76 ENVDRVLDD-VRPYLISDGGNVTVVAVEDGVISLKLEGACGSCPSSTTTMNMGIERVLKE 134
Query: 179 -FVPEVKDIRTV 189
F K+IR V
Sbjct: 135 KFGDAFKEIRQV 146
>gi|300867628|ref|ZP_07112276.1| nitrogen-fixing NifU-like [Oscillatoria sp. PCC 6506]
gi|300334389|emb|CBN57446.1| nitrogen-fixing NifU-like [Oscillatoria sp. PCC 6506]
Length = 79
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD +RP + DGG++ +V L ++GAC CPS++ TL+ G+ L
Sbjct: 9 ENVEQVLDE-LRPYLMSDGGNVELVEIEGPVVQLRLQGACGSCPSSAMTLRMGIERRLRE 67
Query: 179 FVPEVKDIRTV 189
+PE+ ++ V
Sbjct: 68 TIPEIAEVEQV 78
>gi|242094042|ref|XP_002437511.1| hypothetical protein SORBIDRAFT_10g028390 [Sorghum bicolor]
gi|241915734|gb|EER88878.1| hypothetical protein SORBIDRAFT_10g028390 [Sorghum bicolor]
Length = 240
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD VRP++ DGG++ +V L ++GAC CPS++ TLK G+ L
Sbjct: 92 ENVEKVLDE-VRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRD 150
Query: 179 FVPEVKDIRTV 189
+P++ ++ +
Sbjct: 151 KIPDILEVEQI 161
>gi|223993177|ref|XP_002286272.1| nifU like protein [Thalassiosira pseudonana CCMP1335]
gi|220977587|gb|EED95913.1| nifU like protein [Thalassiosira pseudonana CCMP1335]
Length = 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 52 ASVYFGY----DFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNG-GLGDMKLDDMG 106
A++ FG+ + I++ ++ RP + I+ F + + +G G+ +G
Sbjct: 17 AAMAFGHHGARNHISLSTRRHSPFSTRPQLRMTIVSPFDNTEDSDESGEGVATATYTSLG 76
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
S D E + + VL+ +RP + +DGG++ IV L ++GAC CPS+++
Sbjct: 77 SDD--EPLDLTWENVDMVLE-EMRPFLLQDGGNVAISEIDGPIVKLELQGACGTCPSSTQ 133
Query: 167 TLKYGVANILNHFVPEVKDI 186
T+K G+ L +PE++++
Sbjct: 134 TMKMGLERKLRERIPEIQEV 153
>gi|299139675|ref|ZP_07032848.1| nitrogen-fixing NifU domain protein [Acidobacterium sp. MP5ACTX8]
gi|298598299|gb|EFI54464.1| nitrogen-fixing NifU domain protein [Acidobacterium sp. MP5ACTX8]
Length = 197
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%)
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
VRP + GGD G +GIV L + G C CPS+S TLK V L P++K+I
Sbjct: 122 VRPYLQEHGGDCELAGLDNGIVRLRLHGNCGSCPSSSLTLKNAVEEALFQAAPDIKEI 179
>gi|257456257|ref|ZP_05621454.1| NifU-like domain protein [Treponema vincentii ATCC 35580]
gi|257446343|gb|EEV21389.1| NifU-like domain protein [Treponema vincentii ATCC 35580]
Length = 75
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANIL 176
V +K+ LD VRP + DGGD+ F D G+V + ++GAC CP A TLK G+ L
Sbjct: 4 VDEVKQALDV-VRPHLQADGGDVEFVSLSDDGVVSVRLKGACGSCPVALMTLKSGIEAQL 62
Query: 177 NHFVPEVKDIRTV 189
P++K + ++
Sbjct: 63 KESYPDIKKVVSI 75
>gi|332707425|ref|ZP_08427474.1| thioredoxin-like protein [Lyngbya majuscula 3L]
gi|332353776|gb|EGJ33267.1| thioredoxin-like protein [Lyngbya majuscula 3L]
Length = 80
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + + ++ VLD +RP + DGG++ V L ++GAC CPS++ TL+ G
Sbjct: 3 ETMALTPENVETVLDE-MRPYLMADGGNVELVELDGPTVKLRLQGACGSCPSSTMTLRMG 61
Query: 172 VANILNHFVPEVKDIRTV 189
+ L F+PE+ ++ V
Sbjct: 62 IERRLKEFIPEILEVEQV 79
>gi|115469688|ref|NP_001058443.1| Os06g0694500 [Oryza sativa Japonica Group]
gi|53791826|dbj|BAD53892.1| putative Nuclear-encoded plastid gene, NifU1 [Oryza sativa Japonica
Group]
gi|53792847|dbj|BAD53880.1| putative Nuclear-encoded plastid gene, NifU1 [Oryza sativa Japonica
Group]
gi|113596483|dbj|BAF20357.1| Os06g0694500 [Oryza sativa Japonica Group]
gi|215678926|dbj|BAG96356.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695250|dbj|BAG90441.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218198813|gb|EEC81240.1| hypothetical protein OsI_24300 [Oryza sativa Indica Group]
gi|222636145|gb|EEE66277.1| hypothetical protein OsJ_22478 [Oryza sativa Japonica Group]
Length = 219
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD +VRP++ DGG++ +V L ++GAC CPS++ TLK G+ L
Sbjct: 71 ENVEMVLD-QVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRD 129
Query: 179 FVPEV 183
+PE+
Sbjct: 130 KIPEI 134
>gi|223948699|gb|ACN28433.1| unknown [Zea mays]
Length = 221
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ + VLD+ VRP + DGG++ DG++ L + GAC CPS++ T+ G+ +L
Sbjct: 76 ENVDRVLDD-VRPYLISDGGNVTVVAVEDGVISLKLEGACGSCPSSTTTMNMGIERVLKE 134
Query: 179 -FVPEVKDIRTV 189
F K+IR V
Sbjct: 135 KFGDAFKEIRQV 146
>gi|242041121|ref|XP_002467955.1| hypothetical protein SORBIDRAFT_01g037130 [Sorghum bicolor]
gi|241921809|gb|EER94953.1| hypothetical protein SORBIDRAFT_01g037130 [Sorghum bicolor]
Length = 222
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ + VLD+ VRP + DGG++ DG++ L + GAC CPS++ T+ G+ +L
Sbjct: 77 ENVDRVLDD-VRPYLISDGGNVTVVAVEDGVISLKLEGACGSCPSSTTTMNMGIERVLKE 135
Query: 179 -FVPEVKDIRTV 189
F K+IR V
Sbjct: 136 KFGDAFKEIRQV 147
>gi|226363961|ref|YP_002781743.1| hypothetical protein ROP_45510 [Rhodococcus opacus B4]
gi|226242450|dbj|BAH52798.1| hypothetical protein [Rhodococcus opacus B4]
Length = 278
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V R+ LD+ VRP + GGD+ G DG+V L + G+C CPS++ TL+ V + +
Sbjct: 59 VETRVATALDS-VRPYLGSHGGDVELLGVVDGVVRLRLTGSCKSCPSSAVTLELAVKDAV 117
Query: 177 NHFVPEVKDIRTV 189
PE DI V
Sbjct: 118 LAAAPETVDIEVV 130
>gi|221311164|ref|ZP_03593011.1| hypothetical protein Bsubs1_17486 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315491|ref|ZP_03597296.1| hypothetical protein BsubsN3_17402 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320406|ref|ZP_03601700.1| hypothetical protein BsubsJ_17365 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324690|ref|ZP_03605984.1| hypothetical protein BsubsS_17516 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|296331794|ref|ZP_06874261.1| putative iron-sulfur scaffold protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675816|ref|YP_003867488.1| putative iron-sulfur scaffold protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|311069717|ref|YP_003974640.1| putative iron-sulfur scaffold protein [Bacillus atrophaeus 1942]
gi|321312766|ref|YP_004205053.1| putative iron-sulfur scaffold protein [Bacillus subtilis BSn5]
gi|291485686|dbj|BAI86761.1| hypothetical protein BSNT_04769 [Bacillus subtilis subsp. natto
BEST195]
gi|296151119|gb|EFG92001.1| putative iron-sulfur scaffold protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414060|gb|ADM39179.1| putative iron-sulfur scaffold protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|310870234|gb|ADP33709.1| putative iron-sulfur scaffold protein [Bacillus atrophaeus 1942]
gi|320019040|gb|ADV94026.1| putative iron-sulfur scaffold protein [Bacillus subtilis BSn5]
Length = 78
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++++EVLD ++RP + RDGGD +GIV L + GAC CPS++ TLK G+ L
Sbjct: 8 EQVQEVLD-KLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERAL 64
>gi|308174916|ref|YP_003921621.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens DSM 7]
gi|307607780|emb|CBI44151.1| putative iron-sulfur scaffold protein [Bacillus amyloliquefaciens
DSM 7]
gi|328554923|gb|AEB25415.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens TA208]
gi|328913234|gb|AEB64830.1| Putative nitrogen fixation protein yutI [Bacillus amyloliquefaciens
LL3]
Length = 78
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++++EVLD ++RP + RDGGD +GIV L + GAC CPS++ TLK G+ L
Sbjct: 8 EQVQEVLD-KLRPFLLRDGGDCELVDIDEGIVKLRLLGACGSCPSSTITLKAGIERAL 64
>gi|307153189|ref|YP_003888573.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
7822]
gi|306983417|gb|ADN15298.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 7822]
Length = 78
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
++ VLD +RP + DGG++ IV L ++GAC CPS++ TLK G+ L ++
Sbjct: 10 VETVLDE-MRPYLMADGGNVELVEIDGPIVKLRLQGACGSCPSSTMTLKMGIERRLREYI 68
Query: 181 PEVKDIRTV 189
PE+ ++ V
Sbjct: 69 PEIVEVEQV 77
>gi|315639115|ref|ZP_07894282.1| NifU family protein [Campylobacter upsaliensis JV21]
gi|315480819|gb|EFU71456.1| NifU family protein [Campylobacter upsaliensis JV21]
Length = 90
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD ++ +K+ L+ + P + RDGG + F G ++G+V++ + GAC GC S+ TLKY +
Sbjct: 5 SDEELINPVKKSLEKSL-PILERDGGGLEFLGVKNGVVYVHLIGACKGCASSGITLKYSL 63
Query: 173 ANILNHFV-PEVKDI 186
L + PE+ I
Sbjct: 64 ERQLKMDIHPEISII 78
>gi|220907447|ref|YP_002482758.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
7425]
gi|219864058|gb|ACL44397.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 7425]
Length = 76
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+++VLD +RP + DGG++ IV L ++GAC CPS++ TL+ G+ L +
Sbjct: 8 VEKVLDE-LRPYLMADGGNVELVELEGPIVRLRLQGACGSCPSSTMTLRMGIERKLRESI 66
Query: 181 PEVKDIRTV 189
PE+ ++ V
Sbjct: 67 PEIAEVEQV 75
>gi|154687334|ref|YP_001422495.1| YutI [Bacillus amyloliquefaciens FZB42]
gi|154353185|gb|ABS75264.1| YutI [Bacillus amyloliquefaciens FZB42]
Length = 86
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
G + ++ + ++++EVLD ++RP + RDGGD +GIV L + GAC CPS++
Sbjct: 4 KGANLMTEVEMKEQVQEVLD-KLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTI 62
Query: 167 TLKYGVANIL 176
TLK G+ L
Sbjct: 63 TLKAGIERAL 72
>gi|126660171|ref|ZP_01731289.1| putative NifU-like protein [Cyanothece sp. CCY0110]
gi|126618536|gb|EAZ89287.1| putative NifU-like protein [Cyanothece sp. CCY0110]
Length = 80
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
++ VLD +RP + DGG++ IV L ++GAC CPS++ TLK G+ L +
Sbjct: 12 VETVLDE-MRPYLMADGGNVELVEIEGPIVKLRLQGACGSCPSSTMTLKMGIERRLREMI 70
Query: 181 PEVKDI 186
PE+ ++
Sbjct: 71 PEIAEV 76
>gi|119503957|ref|ZP_01626038.1| hypothetical protein MGP2080_09413 [marine gamma proteobacterium
HTCC2080]
gi|119459960|gb|EAW41054.1| hypothetical protein MGP2080_09413 [marine gamma proteobacterium
HTCC2080]
Length = 191
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
++ DS + RI VL N V P++A GG++ + + D + L G C GC + S TLK
Sbjct: 101 VDVDSPIEDRINYVLYNEVNPSLAAHGGEVSLVEITDDALAILRFGGGCQGCSAVSMTLK 160
Query: 170 YGVANILNHFVPEVKDIRTV 189
GV L VPE+ +R V
Sbjct: 161 DGVEKTLLEQVPELSGVRDV 180
>gi|284053033|ref|ZP_06383243.1| nitrogen-fixing NifU domain protein [Arthrospira platensis str.
Paraca]
gi|291566311|dbj|BAI88583.1| iron-sulfur cluster assembly factor [Arthrospira platensis NIES-39]
Length = 79
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD +RP + DGG++ IV L ++GAC CPS++ TLK G+ L
Sbjct: 9 ENVETVLDE-LRPYLMADGGNVEIVELDGPIVRLRLQGACGSCPSSTMTLKMGIERRLRE 67
Query: 179 FVPEVKDIRTV 189
+PE+ ++ +V
Sbjct: 68 KIPEIAEVESV 78
>gi|256827631|ref|YP_003151590.1| thioredoxin-like protein [Cryptobacterium curtum DSM 15641]
gi|256583774|gb|ACU94908.1| thioredoxin-like protein [Cryptobacterium curtum DSM 15641]
Length = 75
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 129 VRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
VRP++ DGGD+ + DG V + ++GAC GCP + TL +G+ IL VP V+ +
Sbjct: 14 VRPSLQADGGDVRLVDVMEDGTVTVELQGACQGCPMSQMTLAHGIERILKDRVPGVQQV 72
>gi|197119169|ref|YP_002139596.1| thioredoxin/NifU-like domain-containing protein [Geobacter
bemidjiensis Bem]
gi|197088529|gb|ACH39800.1| thioredoxin/NifU-like domain protein [Geobacter bemidjiensis Bem]
Length = 73
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ +K +L+ ++RPA+ DGGD+ + + DGIV + + GAC CP ++ TLK G+ +
Sbjct: 3 EEVKAILE-QIRPALQADGGDVELVEVTDDGIVKVRLVGACGHCPMSTMTLKMGIERTIK 61
Query: 178 HFVPEVKDIRTV 189
VP +K++ V
Sbjct: 62 EKVPGIKEVVAV 73
>gi|16080275|ref|NP_391102.1| iron-sulfur scaffold protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|81342154|sp|O32119|YUTI_BACSU RecName: Full=Putative nitrogen fixation protein yutI
gi|2635719|emb|CAB15212.1| putative iron-sulfur scaffold protein [Bacillus subtilis subsp.
subtilis str. 168]
Length = 111
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
G + ++ + ++++EVLD ++RP + RDGGD +GIV L + GAC CPS++
Sbjct: 29 KGANVMTEVEMKEQVQEVLD-KLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTI 87
Query: 167 TLKYGVANIL 176
TLK G+ L
Sbjct: 88 TLKAGIERAL 97
>gi|239906346|ref|YP_002953087.1| nitrogen fixation protein NifU [Desulfovibrio magneticus RS-1]
gi|239796212|dbj|BAH75201.1| nitrogen fixation protein NifU [Desulfovibrio magneticus RS-1]
Length = 281
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+ +V++ +RP + +DGGDI VF+S+RGAC GCPS++ TL V L V
Sbjct: 212 VTKVMEEEIRPNLKKDGGDIELVDIDGQTVFVSLRGACKGCPSSNVTLTEFVQKRLQELV 271
>gi|268317872|ref|YP_003291591.1| nitrogen-fixing NifU domain-containing protein [Rhodothermus
marinus DSM 4252]
gi|262335406|gb|ACY49203.1| nitrogen-fixing NifU domain protein [Rhodothermus marinus DSM 4252]
Length = 96
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSAS 165
+G D + +RI+E LD +RP + DGG + + D +V L + GAC CP +
Sbjct: 10 TGPLAPDDPELHRRIEEALDM-IRPYLMTDGGSVRLLNVTEDYVVELELLGACGTCPMSL 68
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TL+ G+ +L VPE+ + V
Sbjct: 69 MTLRAGIEQVLKRAVPEITRVEAV 92
>gi|123965714|ref|YP_001010795.1| NifU-like protein [Prochlorococcus marinus str. MIT 9515]
gi|123200080|gb|ABM71688.1| NifU-like protein [Prochlorococcus marinus str. MIT 9515]
Length = 81
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD +RP + DGG++ IV + ++GAC CPS++ TLK G+ L
Sbjct: 11 ENVEKVLD-ELRPFLISDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKLKE 69
Query: 179 FVPEVKDIRTV 189
+PE+ ++ V
Sbjct: 70 MIPEISEVVQV 80
>gi|295107477|emb|CBL05020.1| Thioredoxin-like proteins and domains [Gordonibacter pamelaeae
7-10-1-b]
Length = 78
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 129 VRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
+RP++ DGGD+ F DG+V + ++GAC GCP + TL GV IL VP V +
Sbjct: 14 IRPSLQADGGDVRFVDVDEDGVVSVELQGACKGCPMSEMTLANGVERILKERVPGVTKVV 73
Query: 188 TV 189
V
Sbjct: 74 AV 75
>gi|209523451|ref|ZP_03272006.1| nitrogen-fixing NifU domain protein [Arthrospira maxima CS-328]
gi|209496193|gb|EDZ96493.1| nitrogen-fixing NifU domain protein [Arthrospira maxima CS-328]
Length = 79
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD +RP + DGG++ IV L ++GAC CPS++ TLK G+ L
Sbjct: 9 ENVETVLDE-LRPYLMADGGNVEVVELDGPIVRLRLQGACGSCPSSTMTLKMGIERRLRE 67
Query: 179 FVPEVKDIRTV 189
+PE+ ++ +V
Sbjct: 68 RIPEIAEVESV 78
>gi|186681985|ref|YP_001865181.1| NifU domain-containing protein [Nostoc punctiforme PCC 73102]
gi|186464437|gb|ACC80238.1| nitrogen-fixing NifU domain protein [Nostoc punctiforme PCC 73102]
Length = 76
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ ++ VLD +RP + DGG++ +V L ++GAC CPS++ TL+ G+ L
Sbjct: 5 IDNVETVLDE-MRPYLMSDGGNVELVELDGPVVKLRLQGACGSCPSSAMTLRMGIERRLK 63
Query: 178 HFVPEVKDIRTV 189
+PE+ +I V
Sbjct: 64 EMIPEIAEIEQV 75
>gi|158334696|ref|YP_001515868.1| NifU domain-containing protein [Acaryochloris marina MBIC11017]
gi|158304937|gb|ABW26554.1| NifU domain protein [Acaryochloris marina MBIC11017]
Length = 80
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD +RP + DGG++ +V L ++GAC CPS++ TLK G+ L
Sbjct: 10 ENVETVLDE-LRPYLMADGGNVELVEVEGPVVKLRLQGACGSCPSSAMTLKMGIERKLRD 68
Query: 179 FVPEVKDIRTV 189
+PE+ ++ V
Sbjct: 69 TIPEIAEVEQV 79
>gi|289548959|ref|YP_003473947.1| nitrogen-fixing NifU domain protein [Thermocrinis albus DSM 14484]
gi|289182576|gb|ADC89820.1| nitrogen-fixing NifU domain protein [Thermocrinis albus DSM 14484]
Length = 85
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I+ VLD +RPA+ DGGD+ + DG V + M GAC+GC + TLK G+ L
Sbjct: 5 EEIEAVLDE-IRPALRFDGGDVELVDVLEDGTVLVRMIGACAGCGMSVLTLKAGIERALK 63
Query: 178 HFVPEVKDIRTV 189
P++K+++ V
Sbjct: 64 SRFPDIKEVKDV 75
>gi|225850623|ref|YP_002730857.1| hypothetical protein PERMA_1071 [Persephonella marina EX-H1]
gi|225646187|gb|ACO04373.1| conserved domain protein [Persephonella marina EX-H1]
Length = 89
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
Q ++EVL N++RPA+A D G+I + V+L + GACS CP T+ + + H
Sbjct: 10 QEVEEVL-NKIRPALALDQGNIKLIKVENNDVYLELLGACSTCPVPDITMNDVIITTIKH 68
Query: 179 FVPEVKDIR 187
+P V+ +
Sbjct: 69 LLPWVETVH 77
>gi|304408198|ref|ZP_07389847.1| nitrogen-fixing NifU domain protein [Paenibacillus curdlanolyticus
YK9]
gi|304342886|gb|EFM08731.1| nitrogen-fixing NifU domain protein [Paenibacillus curdlanolyticus
YK9]
Length = 81
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 123 EVLD--NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
EVLD +++RP + RDGGD+ +GIV L + GAC CPS++ TLK G+ L
Sbjct: 12 EVLDVLDKLRPFLQRDGGDVELVDVEEGIVKLRLVGACGSCPSSTITLKAGIERAL 67
>gi|317494418|ref|ZP_07952832.1| IscR-regulated protein YhgI [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917668|gb|EFV39013.1| IscR-regulated protein YhgI [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 191
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
++ D+ +++R++ VL +++ P +A GG + + + DGI L G C+GC TLK
Sbjct: 101 VDDDAPLIERVEYVLQSQINPQLAGHGGKVTLMEITEDGIAILQFGGGCNGCSMVDYTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLQKFPELKGVR 178
>gi|294625346|ref|ZP_06703982.1| thioredoxin-like protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294664692|ref|ZP_06730025.1| thioredoxin-like protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292600364|gb|EFF44465.1| thioredoxin-like protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292605545|gb|EFF48863.1| thioredoxin-like protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 199
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASE 166
G+ +++V+R++ V++N V P +A GG + + DG+V L G C GC A
Sbjct: 100 GEAPAESASMVERVRWVVENEVNPQLASHGGRVAVQEVSADGVVLLRFGGGCHGCGMADV 159
Query: 167 TLKYGVANILNHFVPEVKDIR 187
TLK G+ L VP V +R
Sbjct: 160 TLKQGIEKTLMGRVPGVTAVR 180
>gi|261886108|ref|ZP_06010147.1| NifU family protein [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 88
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD +++ +KE L + P + +DGG + G ++G+V++ + G C GC ++S+TLKYG
Sbjct: 5 SDEELLEPVKESL-KVIMPMLEQDGGGMELLGIKNGVVYVRLTGHCHGCAASSQTLKYGA 63
Query: 173 ANILN 177
L+
Sbjct: 64 ERQLS 68
>gi|17228804|ref|NP_485352.1| hypothetical protein asr1309 [Nostoc sp. PCC 7120]
gi|75909243|ref|YP_323539.1| nitrogen-fixing NifU-like protein [Anabaena variabilis ATCC 29413]
gi|17130656|dbj|BAB73266.1| asr1309 [Nostoc sp. PCC 7120]
gi|75702968|gb|ABA22644.1| Nitrogen-fixing NifU-like protein [Anabaena variabilis ATCC 29413]
Length = 76
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ ++ VLD +RP + DGG++ IV L ++GAC CPS++ TL+ G+ L
Sbjct: 5 IDNVETVLDE-MRPYLISDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGIERRLR 63
Query: 178 HFVPEVKDIRTV 189
+PE+ ++ V
Sbjct: 64 EMIPEIAEVEQV 75
>gi|284162204|ref|YP_003400827.1| nitrogen-fixing NifU domain protein [Archaeoglobus profundus DSM
5631]
gi|284012201|gb|ADB58154.1| nitrogen-fixing NifU domain protein [Archaeoglobus profundus DSM
5631]
Length = 77
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++++EV++ +RP + DGG+I ++GIV + + GAC GCP A TL V L
Sbjct: 5 EKVEEVVNKEIRPYLMADGGNIAVVDVDEKEGIVKVKLMGACYGCPMAQITLTAFVEQHL 64
Query: 177 NHFVPEVKDI 186
+PEVK +
Sbjct: 65 KSRIPEVKKV 74
>gi|225010130|ref|ZP_03700602.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-3C]
gi|225005609|gb|EEG43559.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-3C]
Length = 79
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++Q++++ LD +RP + DGGDI +G V + + GAC GC TLK GV +
Sbjct: 6 LLQQVEKALD-EIRPFLQSDGGDIALEGIEGNTVKVRLMGACVGCSVNQMTLKSGVELTI 64
Query: 177 NHFVPEVKDI 186
+ P+++ +
Sbjct: 65 KKYAPQIEQV 74
>gi|116781227|gb|ABK22014.1| unknown [Picea sitchensis]
Length = 238
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V+ I+ +LD VRP + DGG++ +V L ++GAC CPS+ T+K G+ L
Sbjct: 89 TVENIEMILD-EVRPYLMADGGNVELHEIDGNVVTLKLQGACGSCPSSMTTMKTGIEGRL 147
Query: 177 NHFVPEVKDIRTV 189
+PE+ ++ V
Sbjct: 148 MEKIPEIIAVKQV 160
>gi|237751304|ref|ZP_04581784.1| NifU family protein [Helicobacter bilis ATCC 43879]
gi|229372670|gb|EEO23061.1| NifU family protein [Helicobacter bilis ATCC 43879]
Length = 95
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD+ ++ +++ + N VRP + +DGGDI ++ VF+ GACSGCPS + TL +
Sbjct: 20 SDTELLAPVRQSI-NSVRPILLKDGGDIEIVEIKNACVFVRFHGACSGCPSKNATLHNAI 78
Query: 173 ANILNHFV-PEVK 184
L + P++K
Sbjct: 79 LATLQRDIHPDIK 91
>gi|258404239|ref|YP_003196981.1| Fe-S cluster assembly protein NifU [Desulfohalobium retbaense DSM
5692]
gi|257796466|gb|ACV67403.1| Fe-S cluster assembly protein NifU [Desulfohalobium retbaense DSM
5692]
Length = 283
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q + +V++ +RP++ +DGGDI V +++RG CSGCPS+ TLK V L
Sbjct: 210 MQLVNDVIEKEIRPSLQKDGGDIELIDIEGREVQVALRGMCSGCPSSQLTLKNVVERRLQ 269
Query: 178 HFV-PEV 183
V PE+
Sbjct: 270 ERVEPEI 276
>gi|282898150|ref|ZP_06306143.1| Nitrogen-fixing NifU-like protein [Raphidiopsis brookii D9]
gi|281196974|gb|EFA71877.1| Nitrogen-fixing NifU-like protein [Raphidiopsis brookii D9]
Length = 76
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ ++ VLD +RP + DGG++ IV L ++GAC CPS++ TL+ G+ L
Sbjct: 5 LENVETVLDE-MRPYLMSDGGNVEVVELDGPIVKLRLQGACGSCPSSTMTLRMGIERRLK 63
Query: 178 HFVPEVKDIRTV 189
+PE+ ++ V
Sbjct: 64 EMIPEIGEVEQV 75
>gi|33860975|ref|NP_892536.1| NifU-like protein [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33639707|emb|CAE18877.1| NifU-like protein [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 81
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD +RP + DGG++ IV + ++GAC CPS++ TLK G+ L
Sbjct: 11 ENVETVLD-ELRPFLISDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKLKE 69
Query: 179 FVPEVKDIRTV 189
+PE+ ++ V
Sbjct: 70 MIPEISEVVQV 80
>gi|126656503|ref|ZP_01727764.1| Fe-S cluster assembly protein NifU [Cyanothece sp. CCY0110]
gi|126622189|gb|EAZ92896.1| Fe-S cluster assembly protein NifU [Cyanothece sp. CCY0110]
Length = 293
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV-ANILNHF 179
I++VL+ VRPA+A+DGGD+ +V + ++GAC CPS++ TLK + A + +
Sbjct: 225 IQQVLEEEVRPALAQDGGDVDLFDVDGDLVKVILKGACDSCPSSTATLKMAIEARLRDRV 284
Query: 180 VPEV 183
P++
Sbjct: 285 SPDL 288
>gi|282900620|ref|ZP_06308562.1| Nitrogen-fixing NifU-like protein [Cylindrospermopsis raciborskii
CS-505]
gi|281194420|gb|EFA69375.1| Nitrogen-fixing NifU-like protein [Cylindrospermopsis raciborskii
CS-505]
Length = 76
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ ++ VLD +RP + DGG++ IV L ++GAC CPS++ TL+ G+ L
Sbjct: 5 LENVETVLDE-MRPYLISDGGNVEVVELDGPIVKLRLQGACGSCPSSTMTLRMGIERRLK 63
Query: 178 HFVPEVKDIRTV 189
+PE+ ++ V
Sbjct: 64 EMIPEIGEVEQV 75
>gi|218245975|ref|YP_002371346.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
8801]
gi|257059024|ref|YP_003136912.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 8802]
gi|218166453|gb|ACK65190.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 8801]
gi|256589190|gb|ACV00077.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 8802]
Length = 79
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
++ VLD +RP + DGG++ +V L ++GAC CPS++ TL+ G+ L +
Sbjct: 11 VETVLDE-MRPYLMADGGNVELVELDGPVVKLRLQGACGSCPSSTMTLRMGIERRLREMI 69
Query: 181 PEVKDIRTV 189
PE+ ++ V
Sbjct: 70 PEIAEVEQV 78
>gi|91201114|emb|CAJ74173.1| strongly similar to iron sulfur [Fe-S] cofactor protein NifU
[Candidatus Kuenenia stuttgartiensis]
Length = 284
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
++E ++ +RPA+ DGGDI V +S RG+CS CPS+ TLK V L FV
Sbjct: 214 VQETIEREIRPALLADGGDIELIDIDGDRVMVSFRGSCSACPSSGVTLKSTVEAKLREFV 273
Query: 181 PEV 183
+
Sbjct: 274 TDT 276
>gi|78047985|ref|YP_364160.1| thioredoxin-like protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|325927803|ref|ZP_08189028.1| thioredoxin-like protein [Xanthomonas perforans 91-118]
gi|123584909|sp|Q3BSV3|NFUA_XANC5 RecName: Full=Fe/S biogenesis protein nfuA
gi|78036415|emb|CAJ24106.1| thioredoxin-like protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|325541793|gb|EGD13310.1| thioredoxin-like protein [Xanthomonas perforans 91-118]
Length = 199
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASE 166
G+ +++V+R++ V++N + P +A GG + + DG+V L G C GC A
Sbjct: 100 GEAPAESASMVERVRWVVENEINPQLASHGGRVAVQEVSADGVVLLRFGGGCHGCGMADV 159
Query: 167 TLKYGVANILNHFVPEVKDIR 187
TLK G+ L VP V +R
Sbjct: 160 TLKQGIEKTLMGRVPGVTAVR 180
>gi|166364297|ref|YP_001656570.1| NifU-like protein [Microcystis aeruginosa NIES-843]
gi|166086670|dbj|BAG01378.1| NifU-like protein [Microcystis aeruginosa NIES-843]
Length = 78
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+++VLD +RP + DGG++ +V L ++GAC CPS++ TLK G+ L +
Sbjct: 10 VEQVLDE-MRPYLMADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLKMGIERRLREVI 68
Query: 181 PEVKDI 186
PE+ ++
Sbjct: 69 PEIAEV 74
>gi|67921653|ref|ZP_00515171.1| Nitrogen-fixing NifU, C-terminal [Crocosphaera watsonii WH 8501]
gi|67856765|gb|EAM52006.1| Nitrogen-fixing NifU, C-terminal [Crocosphaera watsonii WH 8501]
Length = 80
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
++ VLD +RP + DGG++ +V L ++GAC CPS++ TL+ G+ L +
Sbjct: 12 VETVLDE-MRPYLMADGGNVELVDIEGPVVKLRLQGACGSCPSSTMTLRMGIERRLREMI 70
Query: 181 PEVKDIRTV 189
PE+ ++ V
Sbjct: 71 PEIGEVEQV 79
>gi|163848313|ref|YP_001636357.1| Rieske (2Fe-2S) domain-containing protein [Chloroflexus aurantiacus
J-10-fl]
gi|163669602|gb|ABY35968.1| Rieske (2Fe-2S) domain protein [Chloroflexus aurantiacus J-10-fl]
Length = 293
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ R + VLD+ RP + GGD RDG+ +L + G+C+GC ++ TL+ V +L
Sbjct: 100 ITRARRVLDS-ARPYMQSHGGDAELIDVRDGVAYLRLHGSCNGCSLSAFTLRKHVEEVLL 158
Query: 178 HFVPEVKDIRTV 189
VPE+ + V
Sbjct: 159 REVPEITRLEVV 170
>gi|317495423|ref|ZP_07953792.1| NifU domain-containing protein [Gemella moribillum M424]
gi|316914482|gb|EFV35959.1| NifU domain-containing protein [Gemella moribillum M424]
Length = 84
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+V +IK L+ ++RP + DGG+I F Y+DGI+ + G C+ C + TLK+ + +
Sbjct: 8 IVDKIKLELE-KIRPKLIADGGNIEFINYKDGILKIRFLGECAHCELSHITLKFAIEKNI 66
Query: 177 NHFVPEVKDIRTV 189
+PEV + V
Sbjct: 67 KEKIPEVNKVIEV 79
>gi|86134908|ref|ZP_01053490.1| NifU-like protein [Polaribacter sp. MED152]
gi|85821771|gb|EAQ42918.1| NifU-like protein [Polaribacter sp. MED152]
Length = 78
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+++ LD +RP + DGG+I D IV + ++GAC+GC TLK GV + +
Sbjct: 9 NVEKALD-EIRPFLMSDGGNIKLLSIEDAIVKVQLQGACTGCSVNQMTLKNGVEATIKKY 67
Query: 180 VPEVKDIRTV 189
P+++ + V
Sbjct: 68 APQIEQVINV 77
>gi|253700042|ref|YP_003021231.1| nitrogen-fixing NifU domain protein [Geobacter sp. M21]
gi|251774892|gb|ACT17473.1| nitrogen-fixing NifU domain protein [Geobacter sp. M21]
Length = 73
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ +K +L+ ++RPA+ DGGD+ + + DGIV + + GAC CP ++ TLK G+ +
Sbjct: 3 EEVKAILE-QIRPALQADGGDVELVEVTDDGIVKVRLVGACGHCPMSTMTLKMGIERTIK 61
Query: 178 HFVPEVKDIRTV 189
+P +K++ V
Sbjct: 62 DKIPGIKEVVAV 73
>gi|319891909|ref|YP_004148784.1| Nitrogen-fixing NifU domain protein [Staphylococcus
pseudintermedius HKU10-03]
gi|317161605|gb|ADV05148.1| Nitrogen-fixing NifU domain protein [Staphylococcus
pseudintermedius HKU10-03]
gi|323465000|gb|ADX77153.1| nitrogen fixation protein NifU [Staphylococcus pseudintermedius
ED99]
Length = 80
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ + ++ EV++ ++RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 4 ENATMYDQVAEVIE-KLRPFLLRDGGDCELVDVEDGIVKLQLLGACGTCPSSTITLKAGI 62
Query: 173 ANIL 176
L
Sbjct: 63 ERAL 66
>gi|323343211|ref|ZP_08083442.1| Fe/S-biogenesis protein NfuA [Erysipelothrix rhusiopathiae ATCC
19414]
gi|322463275|gb|EFY08470.1| Fe/S-biogenesis protein NfuA [Erysipelothrix rhusiopathiae ATCC
19414]
Length = 79
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+RI E LD ++RP + RDGGD+ F +G+V + + GAC GC TLK GV +L
Sbjct: 5 ERIIESLD-KIRPYIQRDGGDMEFVSVDENGVVTVKLLGACIGCGLIDYTLKGGVEALLM 63
Query: 178 HFVPEV 183
+PEV
Sbjct: 64 DEIPEV 69
>gi|111021577|ref|YP_704549.1| nitrogen fixation protein [Rhodococcus jostii RHA1]
gi|110821107|gb|ABG96391.1| possible nitrogen fixation protein [Rhodococcus jostii RHA1]
Length = 318
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V R+ LD+ VRP + GGD+ G +G+V L + G+C CPS++ TL+ V + +
Sbjct: 99 VETRVATALDS-VRPYLGSHGGDVELLGVVEGVVRLRLTGSCQSCPSSAVTLELAVKDAV 157
Query: 177 NHFVPEVKDIRTV 189
PE DI V
Sbjct: 158 LAAAPETVDIEVV 170
>gi|222526228|ref|YP_002570699.1| Rieske (2Fe-2S) domain-containing protein [Chloroflexus sp.
Y-400-fl]
gi|222450107|gb|ACM54373.1| Rieske (2Fe-2S) domain protein [Chloroflexus sp. Y-400-fl]
Length = 285
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ R + VLD+ RP + GGD RDG+ +L + G+C+GC ++ TL+ V +L
Sbjct: 92 ITRARRVLDS-ARPYMQSHGGDAELIDVRDGVAYLRLHGSCNGCSLSAFTLRKHVEEVLL 150
Query: 178 HFVPEVKDIRTV 189
VPE+ + V
Sbjct: 151 REVPEITRLEVV 162
>gi|158520102|ref|YP_001527972.1| NifU domain-containing protein [Desulfococcus oleovorans Hxd3]
gi|158508928|gb|ABW65895.1| nitrogen-fixing NifU domain protein [Desulfococcus oleovorans Hxd3]
Length = 72
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+++K LD ++RP + DGGD+ +G V + ++GAC+GCP + TLK + L
Sbjct: 3 EQVKAALD-KIRPQLQADGGDVELVDVENGNVSVRLKGACAGCPMSQITLKQRIEAYLKK 61
Query: 179 FVPEVKDIRTV 189
VP V ++ V
Sbjct: 62 TVPGVINVEKV 72
>gi|116072270|ref|ZP_01469537.1| NifU-like protein [Synechococcus sp. BL107]
gi|116064792|gb|EAU70551.1| NifU-like protein [Synechococcus sp. BL107]
Length = 81
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + ++ ++ VLD +RP + DGG++ IV + ++GAC CPS++ TLK G
Sbjct: 4 ETKALTLENVETVLDE-LRPFLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDI 186
+ + +PEV ++
Sbjct: 63 IERKMRESIPEVSEV 77
>gi|82548259|gb|ABB82950.1| uncharacterized protein with NifU-like and HesB-like domains
[uncultured organism HF70_19B12]
Length = 187
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 8/167 (4%)
Query: 25 EGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEH 84
E +H+S+ E E LA RI I G F YD + + + V G +
Sbjct: 10 EMLLHYSSQAE-EGDSLALRI-EIVGRGPKGFQYDLQFIDISDASADDVAQEVRGFQVRI 67
Query: 85 FISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV-----VQRIKEVLDNRVRPAVARDGGD 139
+ + L D K MG G E+ + + QR+ EV+D V PAVA GG
Sbjct: 68 AMRSAKYLEGATL-DFKETLMGGGFSFENPNPLWIDDLSQRVAEVIDKNVNPAVASHGGH 126
Query: 140 IVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+ G ++ G C GC A TLK GV ++ VPE+ ++
Sbjct: 127 VDLVGVDANKAIIAFGGGCQGCGMADVTLKQGVEVMIMDNVPEIIEV 173
>gi|33866219|ref|NP_897778.1| NifU-like protein [Synechococcus sp. WH 8102]
gi|78212340|ref|YP_381119.1| NifU-like protein [Synechococcus sp. CC9605]
gi|33639194|emb|CAE08202.1| NifU-like protein [Synechococcus sp. WH 8102]
gi|78196799|gb|ABB34564.1| NifU-like protein [Synechococcus sp. CC9605]
Length = 81
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + ++ +++VLD +RP + DGG++ IV + ++GAC CPS++ TLK G
Sbjct: 4 ETMALTLENVEKVLDE-LRPFLMADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDIRTV 189
+ + +PEV ++ V
Sbjct: 63 IERKMRESIPEVSEVVQV 80
>gi|269928406|ref|YP_003320727.1| nitrogen-fixing NifU domain-containing protein [Sphaerobacter
thermophilus DSM 20745]
gi|269787763|gb|ACZ39905.1| nitrogen-fixing NifU domain protein [Sphaerobacter thermophilus DSM
20745]
Length = 290
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V +R+ + LD RVRP + GGD+ DG+ + +RG C GCP+++ TL+ + +
Sbjct: 88 VEERVGQALD-RVRPYLHSHGGDVDLLEIVDGVARVRLRGTCRGCPASAVTLRLAIERAV 146
Query: 177 NHFVPEVKDIRTV 189
+ P++ I V
Sbjct: 147 HELAPDLDGIEAV 159
>gi|254524604|ref|ZP_05136659.1| protein GntY [Stenotrophomonas sp. SKA14]
gi|219722195|gb|EED40720.1| protein GntY [Stenotrophomonas sp. SKA14]
Length = 199
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVA 173
+++V+R+ V++N + P +A GG + + DG+V L G C GC A TLK G+
Sbjct: 107 ASLVERVHWVVENEINPQLASHGGKVAVQEVSADGVVLLRFGGGCQGCGMADVTLKQGIE 166
Query: 174 NILNHFVPEVKDIR 187
L VP V +R
Sbjct: 167 KTLMGRVPGVTAVR 180
>gi|88801953|ref|ZP_01117481.1| NifU-like protein [Polaribacter irgensii 23-P]
gi|88782611|gb|EAR13788.1| NifU-like protein [Polaribacter irgensii 23-P]
Length = 78
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 122 KEVLDN------RVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+E L+N +RP + DGG+I DG+V + + GAC+GC TLK GV
Sbjct: 4 EETLENVEKALEEIRPFLMSDGGNIKLLSIEDGVVKVQLEGACTGCSVNQMTLKNGVEAT 63
Query: 176 LNHFVPEVKDIRTV 189
+ + P++ ++ V
Sbjct: 64 IKKYAPQIVEVINV 77
>gi|159902957|ref|YP_001550301.1| NifU-like protein [Prochlorococcus marinus str. MIT 9211]
gi|159888133|gb|ABX08347.1| NifU-like protein [Prochlorococcus marinus str. MIT 9211]
Length = 81
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+++VLD +RP + DGG++ IV + ++GAC CPS++ TLK G+ L +
Sbjct: 13 VEKVLDE-LRPFLMADGGNVEIVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKLREMI 71
Query: 181 PEVKDI 186
PEV ++
Sbjct: 72 PEVSEV 77
>gi|268325898|emb|CBH39486.1| conserved hypothetical protein, containing NifU-like domain
[uncultured archaeon]
Length = 116
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
++KEV++ ++P A DGG I D L + GAC+GCP + TL V L
Sbjct: 4 KVKEVIEKELKPLFAVDGGGIELVSVDDSEAKLKLSGACAGCPMSQYTLANIVEVTLKEK 63
Query: 180 VPEVKDI 186
VPE+K++
Sbjct: 64 VPELKEV 70
>gi|325972864|ref|YP_004249055.1| nitrogen-fixing NifU domain-containing protein [Spirochaeta sp.
Buddy]
gi|324028102|gb|ADY14861.1| nitrogen-fixing NifU domain-containing protein [Spirochaeta sp.
Buddy]
Length = 75
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
++K +++ +RP++ DGGDI F V + ++GAC+GCP + TLK GV L +F
Sbjct: 4 KVKRAIED-IRPSLQNDGGDIEFVSLVGSDVTVRLKGACAGCPMSQMTLKSGVERYLRNF 62
Query: 180 V 180
V
Sbjct: 63 V 63
>gi|16332125|ref|NP_442853.1| NifU protein [Synechocystis sp. PCC 6803]
gi|1653754|dbj|BAA18665.1| NifU protein [Synechocystis sp. PCC 6803]
Length = 76
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ ++ VLD +RP + DGG++ IV + ++GAC CPS++ TLK G+ L
Sbjct: 5 LNNVETVLDE-LRPYLMADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLKMGIERKLR 63
Query: 178 HFVPEVKDIRTV 189
+PE+ ++ V
Sbjct: 64 EMIPEIAEVEQV 75
>gi|78189610|ref|YP_379948.1| NifU protein, putative [Chlorobium chlorochromatii CaD3]
gi|78171809|gb|ABB28905.1| NifU protein, putative [Chlorobium chlorochromatii CaD3]
Length = 84
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSAS 165
S D++ S ++ R+ L+ VRP + DGGD G +D +V + + GAC CP ++
Sbjct: 2 SKDYLPSSDSLYDRVIAALET-VRPYLQADGGDCQLVGISKDMVVDVKLLGACGSCPMST 60
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TL+ GV + +PE+ + +V
Sbjct: 61 LTLRAGVEQAIKKAIPEIVRVESV 84
>gi|95929342|ref|ZP_01312085.1| nitrogen-fixing NifU-like [Desulfuromonas acetoxidans DSM 684]
gi|95134458|gb|EAT16114.1| nitrogen-fixing NifU-like [Desulfuromonas acetoxidans DSM 684]
Length = 74
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILN 177
++I+ LD VRP + DGG++ D G+V + + GAC CP ++ TLK G+ IL
Sbjct: 3 EQIEAALDE-VRPTLLADGGNVELVDVSDDGVVSVKLVGACGSCPMSTVTLKMGIERILL 61
Query: 178 HFVPEVKDIRTV 189
VP VK++ V
Sbjct: 62 EKVPGVKEVVQV 73
>gi|283851976|ref|ZP_06369252.1| Fe-S cluster assembly protein NifU [Desulfovibrio sp. FW1012B]
gi|283572700|gb|EFC20684.1| Fe-S cluster assembly protein NifU [Desulfovibrio sp. FW1012B]
Length = 283
Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+ +V++ +RP + +DGGDI V +S+RGAC GCP ++ TL V N L V
Sbjct: 213 VTKVMEEEIRPNLKKDGGDIELVDIDGHTVVVSLRGACKGCPKSNLTLTEFVQNRLRELV 272
Query: 181 -PEV 183
PE+
Sbjct: 273 EPEI 276
>gi|192359576|ref|YP_001983001.1| yhgI protein [Cellvibrio japonicus Ueda107]
gi|190685741|gb|ACE83419.1| yhgI protein [Cellvibrio japonicus Ueda107]
Length = 197
Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ DS + RI VL N V P++A GG++ + + D I L G C GC S + TLK
Sbjct: 107 VTDDSPLEDRINYVLYNDVNPSLAAHGGNVSLVEVTEDMIAILKFGGGCQGCGSVALTLK 166
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ L +PE+K IR V
Sbjct: 167 QGIEVQLMDKLPELKGIRDV 186
>gi|56751077|ref|YP_171778.1| putative NifU-like protein [Synechococcus elongatus PCC 6301]
gi|81299261|ref|YP_399469.1| putative NifU-like protein [Synechococcus elongatus PCC 7942]
gi|24414813|emb|CAD55626.1| putative NifU-like protein [Synechococcus elongatus PCC 7942]
gi|56686036|dbj|BAD79258.1| putative NifU-like protein [Synechococcus elongatus PCC 6301]
gi|81168142|gb|ABB56482.1| putative NifU-like protein [Synechococcus elongatus PCC 7942]
Length = 81
Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD +RP + DGG++ IV L + GAC CPS++ TL+ G+ L
Sbjct: 11 ENVETVLDE-LRPYLIADGGNVELVELDGPIVKLRLNGACGSCPSSTMTLRMGIERKLRE 69
Query: 179 FVPEVKDIRTV 189
+PE+ ++ V
Sbjct: 70 SIPEISEVEQV 80
>gi|315225280|ref|ZP_07867097.1| nitrogen fixation protein NifU [Capnocytophaga ochracea F0287]
gi|314944963|gb|EFS96995.1| nitrogen fixation protein NifU [Capnocytophaga ochracea F0287]
Length = 79
Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYGVANILN 177
Q++ + LD ++RP + DGGDI DG IV + + G C+ C TLK GV +
Sbjct: 8 QKVIKALD-KIRPYLQNDGGDISLVDIEDGKIVKVRLEGTCTNCSVNQLTLKSGVEMTIK 66
Query: 178 HFVPEVKDIRTV 189
FVP+++ + +V
Sbjct: 67 EFVPQIEKVISV 78
>gi|87125583|ref|ZP_01081428.1| NifU-like protein [Synechococcus sp. RS9917]
gi|86166883|gb|EAQ68145.1| NifU-like protein [Synechococcus sp. RS9917]
Length = 81
Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD +RP + DGG++ +V + ++GAC CPS++ TLK G+ L
Sbjct: 11 ENVEKVLDE-LRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMGIERKLRE 69
Query: 179 FVPEVKDIRTV 189
+PEV ++ V
Sbjct: 70 MIPEVSEVVQV 80
>gi|257790861|ref|YP_003181467.1| nitrogen-fixing NifU domain-containing protein [Eggerthella lenta
DSM 2243]
gi|317488428|ref|ZP_07946981.1| NifU-like domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|325831888|ref|ZP_08164985.1| NifU-like protein [Eggerthella sp. HGA1]
gi|257474758|gb|ACV55078.1| nitrogen-fixing NifU domain protein [Eggerthella lenta DSM 2243]
gi|316912472|gb|EFV34028.1| NifU-like domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|325486209|gb|EGC88661.1| NifU-like protein [Eggerthella sp. HGA1]
Length = 77
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 129 VRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+RP++ DGGD+ + DG+V + ++GAC GCP + TL GV IL VP V +
Sbjct: 14 IRPSLQADGGDVRLVDVNEDGVVSVELQGACKGCPMSQMTLANGVERILKERVPGVTKV 72
>gi|255069975|ref|XP_002507069.1| iron-sulfur cluster scaffold protein, plastid precursor [Micromonas
sp. RCC299]
gi|226522344|gb|ACO68327.1| iron-sulfur cluster scaffold protein, plastid precursor [Micromonas
sp. RCC299]
Length = 393
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%)
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
N VRP +A DGGD+ G DGIV + M GAC C S++ TLK G+ L
Sbjct: 250 NEVRPFLAADGGDVEVVGIEDGIVAVRMFGACGTCSSSTATLKGGIEATL 299
>gi|297792273|ref|XP_002864021.1| hypothetical protein ARALYDRAFT_331396 [Arabidopsis lyrata subsp.
lyrata]
gi|297309856|gb|EFH40280.1| hypothetical protein ARALYDRAFT_331396 [Arabidopsis lyrata subsp.
lyrata]
Length = 707
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD +RP + DGG++ IV + ++GAC CPS++ T+K G+ L
Sbjct: 87 ENVESVLDE-IRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRLME 145
Query: 179 FVPEVKDIRTV 189
+PE+ + V
Sbjct: 146 KIPEIVAVEAV 156
>gi|189345962|ref|YP_001942491.1| nitrogen-fixing NifU domain protein [Chlorobium limicola DSM 245]
gi|189340109|gb|ACD89512.1| nitrogen-fixing NifU domain protein [Chlorobium limicola DSM 245]
Length = 86
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSAS 165
S D++ + A+ R+ L+ VRP + DGGD G +D +V + + GAC CP ++
Sbjct: 4 SKDYLPNSDALYDRVIAALET-VRPYLQVDGGDCQLVGITKDMVVDVKLLGACGSCPMST 62
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TL+ GV + +PE+ + +V
Sbjct: 63 ITLRAGVEQAIKKAIPEIARVESV 86
>gi|119493943|ref|ZP_01624504.1| putative NifU-like protein [Lyngbya sp. PCC 8106]
gi|119452300|gb|EAW33495.1| putative NifU-like protein [Lyngbya sp. PCC 8106]
Length = 79
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD +RP + DGG++ IV L ++GAC CPS++ TLK G+ L
Sbjct: 9 ENVETVLDE-LRPYLMADGGNVEIVELDGPIVRLRLQGACGSCPSSTMTLKMGIERRLRE 67
Query: 179 FVPEVKDIRTV 189
+PE+ ++ V
Sbjct: 68 KIPEIAEVVAV 78
>gi|330720100|gb|EGG98512.1| hypothetical protein imdm_2277 [gamma proteobacterium IMCC2047]
Length = 195
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIV-FLSMRGACSGCPSASETLK 169
+ +S + +R+ VL V P +A GG++ D V L G C GC S TLK
Sbjct: 105 VNENSTLEERVNYVLWTEVNPMLASHGGEVSLMEIADETVAVLKFGGGCQGCSSVDVTLK 164
Query: 170 YGVANILNHFVPEVKDIR 187
GV L +PE+ +IR
Sbjct: 165 EGVEKTLREHIPELTEIR 182
>gi|149195166|ref|ZP_01872257.1| Nitrogen-fixing NifU-like protein [Caminibacter mediatlanticus
TB-2]
gi|149134718|gb|EDM23203.1| Nitrogen-fixing NifU-like protein [Caminibacter mediatlanticus
TB-2]
Length = 98
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+RP + DGGD+ + IVF+ ++G C GC SA TLKYG+ L
Sbjct: 20 EEIRPMLQMDGGDVKLIDVKKPIVFVQLQGGCVGCASAGATLKYGIEKALKE 71
>gi|257457207|ref|ZP_05622382.1| nitrogen-fixing NifU domain protein [Treponema vincentii ATCC
35580]
gi|257445358|gb|EEV20426.1| nitrogen-fixing NifU domain protein [Treponema vincentii ATCC
35580]
Length = 94
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++ LD VRP + GGD+ + DG+V + G C+GCP+A T + + L
Sbjct: 3 EELEKTLDTYVRPLLRTHGGDMQVVDFTDGVVKFKLHGHCAGCPAADFTTENLIQTELMA 62
Query: 179 FVPEVK 184
+PEVK
Sbjct: 63 HLPEVK 68
>gi|121534267|ref|ZP_01666091.1| nitrogen-fixing NifU domain protein [Thermosinus carboxydivorans
Nor1]
gi|121307037|gb|EAX47955.1| nitrogen-fixing NifU domain protein [Thermosinus carboxydivorans
Nor1]
Length = 98
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNHF 179
I++VLD +VRP++ GGDI + D G + + + GACS CP A +TL V L
Sbjct: 8 IQQVLDEKVRPSLLSHGGDISLQEITDDGYIKVRLTGACSTCPGAQQTLAEVVEAALRDA 67
Query: 180 VPEVK 184
P+++
Sbjct: 68 CPDLQ 72
>gi|332292115|ref|YP_004430724.1| nitrogen-fixing NifU domain protein [Krokinobacter diaphorus
4H-3-7-5]
gi|332170201|gb|AEE19456.1| nitrogen-fixing NifU domain protein [Krokinobacter diaphorus
4H-3-7-5]
Length = 80
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVA 173
+ + Q++++ L+ +RP + DGGDI G D IV + ++GAC GC TLK GV
Sbjct: 4 AELTQKVEDALE-EIRPFLQSDGGDITLLGIENDTIVRVQLQGACVGCSVNQMTLKSGVE 62
Query: 174 NILNHFVPEVKDIRTV 189
+ P+++++ V
Sbjct: 63 MTIKKHAPQIEEVINV 78
>gi|296171555|ref|ZP_06852819.1| Rieske family iron-sulfur cluster-binding protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295894117|gb|EFG73878.1| Rieske family iron-sulfur cluster-binding protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 305
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+R+ + LD RVRP + GGD+ + + DG+V L+ G+C CPS++ TL+ V + +
Sbjct: 104 RRVSDALD-RVRPYLGSHGGDVDLLEITDDGVVRLAFAGSCKSCPSSAVTLELAVQDAVC 162
Query: 178 HFVPEVKDIRTV 189
PEV I V
Sbjct: 163 AAAPEVSSIEAV 174
>gi|58582689|ref|YP_201705.1| hypothetical protein XOO3066 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58427283|gb|AAW76320.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 211
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASE 166
G+ +++V+R++ V++N + P +A GG + + DG+V L G C GC A
Sbjct: 112 GEAPAESASMVERVRWVVENEINPQLASHGGRVAVQEVSADGVVLLRFGGGCHGCGMADV 171
Query: 167 TLKYGVANILNHFVPEVKDIR 187
TLK G+ L VP V +R
Sbjct: 172 TLKQGIEKTLMGRVPGVIAVR 192
>gi|84624576|ref|YP_451948.1| hypothetical protein XOO_2919 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|166712246|ref|ZP_02243453.1| hypothetical protein Xoryp_12525 [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|123521499|sp|Q2P1A3|NFUA_XANOM RecName: Full=Fe/S biogenesis protein nfuA
gi|84368516|dbj|BAE69674.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 199
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASE 166
G+ +++V+R++ V++N + P +A GG + + DG+V L G C GC A
Sbjct: 100 GEAPAESASMVERVRWVVENEINPQLASHGGRVAVQEVSADGVVLLRFGGGCHGCGMADV 159
Query: 167 TLKYGVANILNHFVPEVKDIR 187
TLK G+ L VP V +R
Sbjct: 160 TLKQGIEKTLMGRVPGVIAVR 180
>gi|289665916|ref|ZP_06487497.1| hypothetical protein XcampvN_23290 [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 199
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASE 166
G+ +++V+R++ V++N + P +A GG + + DG+V L G C GC A
Sbjct: 100 GEAPAESASMVERVRWVVENEINPQLASHGGRVAVQEVSADGVVLLRFGGGCHGCGMADV 159
Query: 167 TLKYGVANILNHFVPEVKDIR 187
TLK G+ L VP V +R
Sbjct: 160 TLKQGIEKTLMGRVPGVIAVR 180
>gi|37522446|ref|NP_925823.1| hypothetical protein gsl2877 [Gloeobacter violaceus PCC 7421]
gi|35213447|dbj|BAC90818.1| gsl2877 [Gloeobacter violaceus PCC 7421]
Length = 85
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
E++ + +RP + DGG++ IV L ++GAC CPS++ TLK G+ + +P
Sbjct: 18 ELVLDELRPYLMSDGGNVELVEIEGPIVKLRLQGACGSCPSSTYTLKLGIERRMRELIPA 77
Query: 183 VKDIRTV 189
V ++ V
Sbjct: 78 VAEVEQV 84
>gi|78186286|ref|YP_374329.1| NifU protein, putative [Chlorobium luteolum DSM 273]
gi|78166188|gb|ABB23286.1| NifU protein, putative [Chlorobium luteolum DSM 273]
Length = 89
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSAS 165
S D++ + A+ R+ L+ VRP + DGGD G +D +V + + GAC CP ++
Sbjct: 7 SKDYLPNSDALYDRVIAALET-VRPYLQVDGGDCQLVGITKDMVVDVKLLGACGSCPMST 65
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TL+ GV + +PE+ + +V
Sbjct: 66 LTLRAGVEQAIKKAIPEIVRVESV 89
>gi|51246082|ref|YP_065966.1| nitrogen fixation protein (NifU) [Desulfotalea psychrophila LSv54]
gi|50877119|emb|CAG36959.1| probable nitrogen fixation protein (NifU) [Desulfotalea
psychrophila LSv54]
Length = 277
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++I+EVLD +RP + +D GDI V +S+RGAC C ++ T+K V L
Sbjct: 206 IKKIEEVLDKVIRPVLKKDDGDIELVDVDGDFVTVSLRGACKSCSNSQTTIKEYVEKKLR 265
Query: 178 HFVPE 182
V E
Sbjct: 266 ELVLE 270
>gi|255526287|ref|ZP_05393203.1| nitrogen-fixing NifU domain protein [Clostridium carboxidivorans
P7]
gi|296185211|ref|ZP_06853621.1| NifU-like domain protein [Clostridium carboxidivorans P7]
gi|255510000|gb|EET86324.1| nitrogen-fixing NifU domain protein [Clostridium carboxidivorans
P7]
gi|296050045|gb|EFG89469.1| NifU-like domain protein [Clostridium carboxidivorans P7]
Length = 96
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I++V++ +V+P + GDI F +GIV + + G CSGC SA T++ V +
Sbjct: 4 EKIQKVIEEKVKPYLREHNGDIKFLEIENGIVKVKLLGQCSGCVSAKYTVENIVEAAMKE 63
Query: 179 FVPEVKDIRTV 189
+PEV+ + +
Sbjct: 64 EIPEVERVELI 74
>gi|255994758|ref|ZP_05427893.1| NifU family protein [Eubacterium saphenum ATCC 49989]
gi|255993471|gb|EEU03560.1| NifU family protein [Eubacterium saphenum ATCC 49989]
Length = 74
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILN 177
+ IK L+ +VRPA+ DGGD+ F + D +V + ++G C GCP + T+K + L
Sbjct: 3 EEIKAALE-KVRPALQMDGGDVEFVDFTDDKVVKVKLQGHCCGCPMSQMTVKGFIEKALR 61
Query: 178 HFVPEVKDIRTV 189
P++K + TV
Sbjct: 62 ESFPDIKGVETV 73
>gi|194476553|ref|YP_002048732.1| NifU-like protein [Paulinella chromatophora]
gi|171191560|gb|ACB42522.1| NifU-like protein [Paulinella chromatophora]
Length = 81
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + ++ ++ VL N +RP + DGG++ +V + ++GAC CPS++ TLK G
Sbjct: 4 ENLALTLENVETVL-NELRPFLIADGGNVEVAEIDGPVVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDI 186
+ L +PEV ++
Sbjct: 63 IERKLREAIPEVSEV 77
>gi|159028416|emb|CAO89859.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 78
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+++VLD +RP + DGG++ +V + ++GAC CPS++ TLK G+ L +
Sbjct: 10 VEKVLDE-MRPYLMSDGGNVELVEIDGPVVKVRLQGACGSCPSSTMTLKMGIERRLREMI 68
Query: 181 PEVKDI 186
PE+ ++
Sbjct: 69 PEIAEV 74
>gi|298527898|ref|ZP_07015302.1| Fe-S cluster assembly protein NifU [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511550|gb|EFI35452.1| Fe-S cluster assembly protein NifU [Desulfonatronospira
thiodismutans ASO3-1]
Length = 281
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q + V+D +RP++ +DGGDI V +S RGAC+GCPS+ T K V L
Sbjct: 208 MQLVTRVVDEEIRPSLHKDGGDIELVDIEGPKVMVSFRGACAGCPSSHLTAKEVVEKKLK 267
Query: 178 HFVP---EVKDIR 187
V +V+++R
Sbjct: 268 ERVDSQIQVEEVR 280
>gi|219847420|ref|YP_002461853.1| nitrogen-fixing NifU domain-containing protein [Chloroflexus
aggregans DSM 9485]
gi|219541679|gb|ACL23417.1| nitrogen-fixing NifU domain protein [Chloroflexus aggregans DSM
9485]
Length = 286
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V R + VLDN RP + GGD RDG+ ++ + G+C+GC ++ TL+ V L
Sbjct: 93 VTRARRVLDN-ARPYMQSHGGDAELVDVRDGVAYVRLHGSCNGCSLSAFTLRKHVEEALL 151
Query: 178 HFVPEVKDIRTV 189
VPE+ + V
Sbjct: 152 REVPEMTRLEVV 163
>gi|33862527|ref|NP_894087.1| NifU-like protein [Prochlorococcus marinus str. MIT 9313]
gi|124023791|ref|YP_001018098.1| NifU-like protein [Prochlorococcus marinus str. MIT 9303]
gi|33640640|emb|CAE20429.1| NifU-like protein [Prochlorococcus marinus str. MIT 9313]
gi|123964077|gb|ABM78833.1| NifU-like protein [Prochlorococcus marinus str. MIT 9303]
Length = 81
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD +RP + DGG++ +V + ++GAC CPS++ TLK G+ L
Sbjct: 11 ENVETVLDE-LRPFLMADGGNVEIVEIDGPVVKVRLQGACGSCPSSTMTLKMGIERKLRE 69
Query: 179 FVPEVKDIRTV 189
+PEV ++ V
Sbjct: 70 MIPEVSEVVQV 80
>gi|188577468|ref|YP_001914397.1| protein GntY [Xanthomonas oryzae pv. oryzae PXO99A]
gi|254767336|sp|B2STN5|NFUA_XANOP RecName: Full=Fe/S biogenesis protein nfuA
gi|188521920|gb|ACD59865.1| protein GntY [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 199
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASE 166
G+ +++V+R++ V++N + P +A GG + + DG+V L G C GC A
Sbjct: 100 GEAPAESASMVERVRWVVENEINPQLASHGGRVAVQEVSADGVVLLRFGGGCHGCGMADV 159
Query: 167 TLKYGVANILNHFVPEVKDIR 187
TLK G+ L VP V +R
Sbjct: 160 TLKQGIEKTLMGRVPGVIAVR 180
>gi|46579079|ref|YP_009887.1| nitrogen fixation protein nifU [Desulfovibrio vulgaris str.
Hildenborough]
gi|120603338|ref|YP_967738.1| Fe-S cluster assembly protein NifU [Desulfovibrio vulgaris DP4]
gi|46448492|gb|AAS95146.1| nitrogen fixation protein nifU [Desulfovibrio vulgaris str.
Hildenborough]
gi|120563567|gb|ABM29311.1| Fe-S cluster assembly protein NifU [Desulfovibrio vulgaris DP4]
gi|311232925|gb|ADP85779.1| Fe-S cluster assembly protein NifU [Desulfovibrio vulgaris RCH1]
Length = 281
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q + +VLD +RP + +DGGDI V +++RG C+ CPS+ TLK V L
Sbjct: 208 MQLVMKVLDGEIRPRLQQDGGDIELVDMNGTEVMVALRGMCTSCPSSQLTLKEFVERTLR 267
Query: 178 HFVPEVKDIRTV 189
V + +R V
Sbjct: 268 DHVDQEIVVREV 279
>gi|150015239|ref|YP_001307493.1| NifU domain-containing protein [Clostridium beijerinckii NCIMB
8052]
gi|149901704|gb|ABR32537.1| nitrogen-fixing NifU domain protein [Clostridium beijerinckii NCIMB
8052]
Length = 73
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 127 NRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
+++RP + RDGGD+ + DG+V + M+GAC CP A T+K + L VP V +
Sbjct: 10 DKIRPMLQRDGGDVELVDVSNDGVVSVKMQGACGNCPGAMMTIKMIIEQKLKEEVPGVTE 69
Query: 186 I 186
+
Sbjct: 70 V 70
>gi|145219268|ref|YP_001129977.1| NifU domain-containing protein [Prosthecochloris vibrioformis DSM
265]
gi|145205432|gb|ABP36475.1| nitrogen-fixing NifU domain protein [Chlorobium phaeovibrioides DSM
265]
Length = 86
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSAS 165
S D++ + A+ R+ L+ VRP + DGGD G +D +V + + GAC CP ++
Sbjct: 4 SKDYLPNSDALYDRVIAALET-VRPYLQVDGGDCQLVGISKDMVVDVKLLGACGSCPMST 62
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TL+ GV + +PE+ + +V
Sbjct: 63 LTLRAGVEQAIKKAIPEIVRVESV 86
>gi|110637337|ref|YP_677544.1| hypothetical protein CHU_0925 [Cytophaga hutchinsonii ATCC 33406]
gi|110280018|gb|ABG58204.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
Length = 86
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ ++ R+++ L++ +RP + DGG++ + + D IV L + GAC CP ++ TLK GV
Sbjct: 7 NTELLDRVEQALES-IRPYLITDGGNVRLVEITEDMIVKLELLGACGTCPMSAMTLKAGV 65
Query: 173 ANILNHFVPEVKDI 186
+ VPE+K +
Sbjct: 66 EESIRKAVPEIKGV 79
>gi|42525980|ref|NP_971078.1| NifU domain-containing protein [Treponema denticola ATCC 35405]
gi|41816030|gb|AAS10959.1| NifU domain protein [Treponema denticola ATCC 35405]
Length = 75
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 129 VRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
VRP + DGGDI + G V++ ++GAC CP A TLK GV L PEV ++
Sbjct: 14 VRPYLQADGGDIELDSVDEAGKVYVKLKGACGSCPMAIYTLKMGVEEQLKDMFPEVTEVV 73
Query: 188 TV 189
V
Sbjct: 74 AV 75
>gi|310643918|ref|YP_003948676.1| nifu-like protein [Paenibacillus polymyxa SC2]
gi|309248868|gb|ADO58435.1| NifU-like protein [Paenibacillus polymyxa SC2]
Length = 79
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
++ + + + EVL ++RP + RDGGD +GI L GAC+GCPSA+ TLK
Sbjct: 1 MDENGVLFDEVSEVL-LKLRPFLLRDGGDAELVEVENGIAKLRFLGACNGCPSATITLKV 59
Query: 171 GVANILNHFVPEVKDIRTV 189
+ + + ++K++ V
Sbjct: 60 AIERAILEEIDDIKEVVQV 78
>gi|120554445|ref|YP_958796.1| HesB/YadR/YfhF-family protein [Marinobacter aquaeolei VT8]
gi|120324294|gb|ABM18609.1| HesB/YadR/YfhF-family protein [Marinobacter aquaeolei VT8]
Length = 195
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ + +R+ VL + + P +A GGD+ D + L G C GC + S TLK
Sbjct: 104 VADDAPLPERVNYVLASEINPNLAAHGGDVSLVEIVDESVAVLRFGGGCQGCSAVSLTLK 163
Query: 170 YGVANILNHFVPEVKDIRTV 189
GV L VPE+ +R V
Sbjct: 164 QGVEKTLKERVPEISAVRDV 183
>gi|225849734|ref|YP_002729968.1| hypothetical protein PERMA_0171 [Persephonella marina EX-H1]
gi|225645990|gb|ACO04176.1| conserved domain protein [Persephonella marina EX-H1]
Length = 91
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSAS 165
G+ + D A +++EVL+ ++RP + DGGD+ DG V++ + G+C GC +
Sbjct: 5 QGNKVNIDRA---KVEEVLE-QIRPMLRFDGGDVELVDIGEDGTVYVRLMGSCHGCAMSL 60
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TLK G+ L +PEVK++ V
Sbjct: 61 VTLKGGIEMKLKEAIPEVKEVVAV 84
>gi|86608468|ref|YP_477230.1| NifU domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557010|gb|ABD01967.1| NifU domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 80
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VL N +RP + DGG++ +V L ++GAC CPS++ TLK G+ L
Sbjct: 10 ENVEKVL-NELRPYLMADGGNVELVEIDGPVVKLRLQGACGACPSSTMTLKMGIERKLRE 68
Query: 179 FVPEVKDIRTV 189
+P++ ++ V
Sbjct: 69 SIPDILEVEQV 79
>gi|325921235|ref|ZP_08183096.1| thioredoxin-like protein [Xanthomonas gardneri ATCC 19865]
gi|325548298|gb|EGD19291.1| thioredoxin-like protein [Xanthomonas gardneri ATCC 19865]
Length = 199
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 113 SDSA-VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKY 170
+DSA +V+R++ V++N + P +A GG + + DG+V L G C GC A TLK
Sbjct: 104 ADSASMVERVRWVVENEINPQLASHGGRVAVQEVSADGVVLLRFGGGCHGCGMADVTLKQ 163
Query: 171 GVANILNHFVPEVKDIR 187
G+ L VP V +R
Sbjct: 164 GIEKTLMGRVPGVIAVR 180
>gi|325918641|ref|ZP_08180745.1| thioredoxin-like protein [Xanthomonas vesicatoria ATCC 35937]
gi|325535148|gb|EGD07040.1| thioredoxin-like protein [Xanthomonas vesicatoria ATCC 35937]
Length = 199
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 113 SDSA-VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKY 170
+DSA +V+R++ V++N + P +A GG + + DG+V L G C GC A TLK
Sbjct: 104 ADSASMVERVRWVVENEINPQLASHGGRVAVQEVSADGVVLLRFGGGCHGCGMADVTLKQ 163
Query: 171 GVANILNHFVPEVKDIR 187
G+ L VP V +R
Sbjct: 164 GIEKTLMGRVPGVIAVR 180
>gi|312132200|ref|YP_003999540.1| nitrogeN-fixing nifu domain protein [Leadbetterella byssophila DSM
17132]
gi|311908746|gb|ADQ19187.1| nitrogen-fixing NifU domain protein [Leadbetterella byssophila DSM
17132]
Length = 83
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 120 RIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++++ LDN +RP + DGG++ V + D +V L G+C CP +S T K G+ +
Sbjct: 7 KVEQALDN-IRPYLIADGGNVKVLEITEDKVVKLEFTGSCGSCPMSSMTFKAGLEEAILK 65
Query: 179 FVPEVKDIRTV 189
VPE+K + V
Sbjct: 66 NVPEIKSVEAV 76
>gi|87303149|ref|ZP_01085947.1| NifU-like protein [Synechococcus sp. WH 5701]
gi|87282316|gb|EAQ74276.1| NifU-like protein [Synechococcus sp. WH 5701]
Length = 97
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V+ ++ VLD +RP + DGG++ V + ++GAC CPS++ TLK G+ L
Sbjct: 26 VENVERVLDE-LRPYLMADGGNVEIVEIDGPTVKVRLQGACGSCPSSTMTLKMGIERKLR 84
Query: 178 HFVPEVKDI 186
+PEV ++
Sbjct: 85 EAIPEVNEV 93
>gi|86605616|ref|YP_474379.1| NifU domain-containing protein [Synechococcus sp. JA-3-3Ab]
gi|86554158|gb|ABC99116.1| NifU domain protein [Synechococcus sp. JA-3-3Ab]
Length = 80
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VL N +RP + DGG++ +V L ++GAC CPS++ TLK G+ L
Sbjct: 10 ENVEKVL-NELRPYLQADGGNVELVEIDGPVVKLRLQGACGACPSSTLTLKMGIERKLRE 68
Query: 179 FVPEVKDIRTV 189
+P++ ++ V
Sbjct: 69 SIPDILEVEQV 79
>gi|308234420|ref|ZP_07665157.1| nitrogen-fixing NifU domain protein [Atopobium vaginae DSM 15829]
gi|328944265|ref|ZP_08241729.1| YhgI protein [Atopobium vaginae DSM 15829]
gi|327491184|gb|EGF22959.1| YhgI protein [Atopobium vaginae DSM 15829]
Length = 189
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I E + +R ++ DGGDIV D G+V L M GAC+GCP ++ + GV IL
Sbjct: 115 REILEATLDVIRESLQADGGDIVLVNVSDDGVVTLDMVGACAGCPMSAYDMSEGVERILK 174
Query: 178 HFVP 181
VP
Sbjct: 175 EHVP 178
>gi|33239869|ref|NP_874811.1| NifU-like protein [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33237395|gb|AAP99463.1| Thioredoxin family protein [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
Length = 81
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+++VLD +RP + DGG++ IV + ++GAC CPS++ TLK G+ L +
Sbjct: 13 VEKVLD-ELRPFLMADGGNVEIVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKLCEMI 71
Query: 181 PEVKDI 186
PEV ++
Sbjct: 72 PEVSEV 77
>gi|218186519|gb|EEC68946.1| hypothetical protein OsI_37662 [Oryza sativa Indica Group]
Length = 221
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
++ VLD +VRP + DGGD+ +V L ++GAC CPS+ T+K G+ L +
Sbjct: 75 VESVLD-QVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIERRLMEKI 133
Query: 181 PEVKDIRTV 189
P+V + V
Sbjct: 134 PDVAAVEPV 142
>gi|172035474|ref|YP_001801975.1| iron-sulfur cluster assembly protein [Cyanothece sp. ATCC 51142]
gi|171696928|gb|ACB49909.1| iron-sulfur cluster assembly protein [Cyanothece sp. ATCC 51142]
Length = 293
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV-ANILNHF 179
I++VL+ +RP +A+DGGD+ +V ++++GAC C S++ TLK G+ A +
Sbjct: 225 IQQVLEEEIRPFLAKDGGDLELIDIEGDLVKVTLQGACGSCASSTATLKGGIEARLKERV 284
Query: 180 VPEV 183
PE+
Sbjct: 285 SPEL 288
>gi|115487614|ref|NP_001066294.1| Os12g0176200 [Oryza sativa Japonica Group]
gi|75147032|sp|Q84LK7|NIFU1_ORYSJ RecName: Full=NifU-like protein 1, chloroplastic; AltName:
Full=OsNifu1; Flags: Precursor
gi|30698492|dbj|BAC76603.1| NifU1 [Oryza sativa Japonica Group]
gi|77553807|gb|ABA96603.1| nitrogen fixation protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113648801|dbj|BAF29313.1| Os12g0176200 [Oryza sativa Japonica Group]
Length = 226
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
++ VLD +VRP + DGGD+ +V L ++GAC CPS+ T+K G+ L +
Sbjct: 80 VESVLD-QVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIERRLMEKI 138
Query: 181 PEVKDIRTV 189
P+V + V
Sbjct: 139 PDVAAVEPV 147
>gi|8777425|dbj|BAA97015.1| unnamed protein product [Arabidopsis thaliana]
Length = 684
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD +RP + DGG++ IV + ++GAC CPS++ T+K G+ L
Sbjct: 88 ENVESVLDE-IRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRLME 146
Query: 179 FVPEV 183
+PE+
Sbjct: 147 KIPEI 151
>gi|239624672|ref|ZP_04667703.1| predicted protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521058|gb|EEQ60924.1| predicted protein [Clostridiales bacterium 1_7_47FAA]
Length = 96
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
I+ VL+ VRP ++ GG + V +GI+++ M+G C+GCPSA ET+K V L
Sbjct: 9 IEAVLNLFVRPQLSSHGGGLEVVDLDENGILWIEMQGGCAGCPSADETVKNLVQKELVTR 68
Query: 180 VPEVKDIR 187
+P++K +
Sbjct: 69 IPQIKGVE 76
>gi|329767228|ref|ZP_08258755.1| hypothetical protein HMPREF0428_00452 [Gemella haemolysans M341]
gi|328836895|gb|EGF86542.1| hypothetical protein HMPREF0428_00452 [Gemella haemolysans M341]
Length = 84
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +IK L+ ++RP + +DGG+I F +++GI+ + G C+ C + TLKY + +
Sbjct: 9 VDKIKFELE-KIRPKLIKDGGNIEFINFKNGILKIRFLGECAHCELSHITLKYAIEKTIV 67
Query: 178 HFVPEVKDI 186
+PEV +
Sbjct: 68 EKIPEVNKV 76
>gi|256819880|ref|YP_003141159.1| nitrogen-fixing NifU domain-containing protein [Capnocytophaga
ochracea DSM 7271]
gi|256581463|gb|ACU92598.1| nitrogen-fixing NifU domain protein [Capnocytophaga ochracea DSM
7271]
Length = 79
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYGVANILN 177
Q + + LD ++RP + DGGDI DG IV + + G C+ C TLK GV +
Sbjct: 8 QEVIKALD-KIRPYLQNDGGDISLVDIEDGKIVKVRLEGTCTNCSVNQLTLKSGVEMTIK 66
Query: 178 HFVPEVKDIRTV 189
FVP+++ + +V
Sbjct: 67 EFVPQIEKVISV 78
>gi|222616724|gb|EEE52856.1| hypothetical protein OsJ_35404 [Oryza sativa Japonica Group]
Length = 219
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
++ VLD +VRP + DGGD+ +V L ++GAC CPS+ T+K G+ L +
Sbjct: 73 VESVLD-QVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIERRLMEKI 131
Query: 181 PEVKDIRTV 189
P+V + V
Sbjct: 132 PDVAAVEPV 140
>gi|57864812|gb|AAW56987.1| nitrogen fixation protein U [Cyanothece sp. ATCC 51142]
Length = 285
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV-ANILNHF 179
I++VL+ +RP +A+DGGD+ +V ++++GAC C S++ TLK G+ A +
Sbjct: 217 IQQVLEEEIRPFLAKDGGDLELIDIEGDLVKVTLQGACGSCASSTATLKGGIEARLKERV 276
Query: 180 VPEV 183
PE+
Sbjct: 277 SPEL 280
>gi|21242852|ref|NP_642434.1| hypothetical protein XAC2117 [Xanthomonas axonopodis pv. citri str.
306]
gi|51702177|sp|Q8PKQ2|NFUA_XANAC RecName: Full=Fe/S biogenesis protein nfuA
gi|21108342|gb|AAM36970.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 199
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASE 166
G+ +++V+R++ V++N + P +A GG + + +G+V L G C GC A
Sbjct: 100 GEAPAESASMVERVRWVVENEINPQLASHGGRVAVQEVSAEGVVLLRFGGGCHGCGMADV 159
Query: 167 TLKYGVANILNHFVPEVKDIR 187
TLK G+ L VP V +R
Sbjct: 160 TLKQGIEKTLMGRVPGVTAVR 180
>gi|319787304|ref|YP_004146779.1| HesB/YadR/YfhF-family protein [Pseudoxanthomonas suwonensis 11-1]
gi|317465816|gb|ADV27548.1| HesB/YadR/YfhF-family protein [Pseudoxanthomonas suwonensis 11-1]
Length = 198
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVA 173
+++V+R++ V++N + P +A GG + DG V+L G C GC A TLK G+
Sbjct: 106 ASIVERVRWVMENEINPQLASHGGRATVEEVSADGTVWLRFGGGCHGCGMADVTLKQGIE 165
Query: 174 NILNHFVPEVKDIR 187
L VP V +R
Sbjct: 166 KTLIARVPGVTAVR 179
>gi|67922888|ref|ZP_00516385.1| Aminotransferase, class V:Nitrogen-fixing NifU, C-terminal
[Crocosphaera watsonii WH 8501]
gi|67855238|gb|EAM50500.1| Aminotransferase, class V:Nitrogen-fixing NifU, C-terminal
[Crocosphaera watsonii WH 8501]
Length = 469
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV-ANILNHF 179
I+++L+ V+P +A+DGGDI +V + ++GAC CPS++ TLK + A + +
Sbjct: 401 IQQILEEEVKPFLAQDGGDIDLYDIEGDLVKVVLKGACDACPSSTATLKLAIEARLKDRV 460
Query: 180 VPEVKDI 186
PE+ I
Sbjct: 461 DPELTVI 467
>gi|302784594|ref|XP_002974069.1| hypothetical protein SELMODRAFT_16558 [Selaginella moellendorffii]
gi|300158401|gb|EFJ25024.1| hypothetical protein SELMODRAFT_16558 [Selaginella moellendorffii]
Length = 170
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 106 GSGDF-IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSA 164
GSG + E+ + + +VLD VRP + DGG++ DG V L ++ AC CPS+
Sbjct: 19 GSGLYSAETYDFTAENVDKVLD-EVRPYLVADGGNVAVVSVADGTVSLELQRACGTCPSS 77
Query: 165 SETLKYGVANILNH----FVPEVKDI 186
+ T+K G+ +L V EV DI
Sbjct: 78 TSTMKMGIERVLREKFGDAVKEVVDI 103
>gi|224130940|ref|XP_002320962.1| predicted protein [Populus trichocarpa]
gi|222861735|gb|EEE99277.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
Q + VL+ VRP + DGG++ DG++ L ++GAC C S+ T+K G+ +L
Sbjct: 77 QNVDLVLE-EVRPYLISDGGNVDVVSVEDGVITLKLQGACGNCASSETTMKMGIERVLKE 135
Query: 179 -FVPEVKDIRTV 189
F V+DIR +
Sbjct: 136 KFGDAVQDIRQL 147
>gi|77917669|ref|YP_355484.1| Fe-S cluster assembly protein NifU [Pelobacter carbinolicus DSM
2380]
gi|77543752|gb|ABA87314.1| Fe-S cluster assembly protein NifU [Pelobacter carbinolicus DSM
2380]
Length = 281
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
S+ ++ I+E+L+ + P + DGGD+ V +++RG CS CP +S TLK+ V
Sbjct: 203 SNLQKIRLIEEILEREILPPIRSDGGDLELIDIDGSKVLVALRGTCSFCPQSSFTLKHFV 262
Query: 173 ANILNHFV-PEVK 184
L FV PE++
Sbjct: 263 EAKLREFVSPEIE 275
>gi|18423084|ref|NP_568715.1| NFU2 (NIFU-LIKE PROTEIN 2); structural molecule [Arabidopsis
thaliana]
gi|75163219|sp|Q93W20|NIFU2_ARATH RecName: Full=NifU-like protein 2, chloroplastic; Short=AtCNfu2;
Short=AtCnfU-V; Flags: Precursor
gi|13878181|gb|AAK44168.1|AF370353_1 unknown protein [Arabidopsis thaliana]
gi|16226434|gb|AAL16167.1|AF428399_1 AT5g49940/K9P8_8 [Arabidopsis thaliana]
gi|17104539|gb|AAL34158.1| unknown protein [Arabidopsis thaliana]
gi|26452324|dbj|BAC43248.1| unknown protein [Arabidopsis thaliana]
gi|28207818|emb|CAD55559.1| NFU2 protein [Arabidopsis thaliana]
gi|332008490|gb|AED95873.1| NifU-like protein 2 [Arabidopsis thaliana]
Length = 235
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD +RP + DGG++ IV + ++GAC CPS++ T+K G+ L
Sbjct: 88 ENVESVLDE-IRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRLME 146
Query: 179 FVPEV 183
+PE+
Sbjct: 147 KIPEI 151
>gi|325475673|gb|EGC78849.1| NifU domain-containing protein [Treponema denticola F0402]
Length = 75
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 129 VRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
+RP + DGGDI + G V++ ++GAC CP A TLK GV L PEV ++
Sbjct: 14 IRPYLQADGGDIELDSVDEAGKVYVKLKGACGSCPMAIYTLKMGVEEQLKDMFPEVTEVV 73
Query: 188 TV 189
V
Sbjct: 74 AV 75
>gi|163310812|pdb|2JNV|A Chain A, Solution Structure Of C-Terminal Domain Of Nifu-Like
Protein From Oryza Sativa
Length = 91
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
++ VLD +VRP + DGGD+ +V L ++GAC CPS+ T+K G+ L +
Sbjct: 10 VESVLD-QVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIERRLMEKI 68
Query: 181 PEVKDIRTV 189
P+V + V
Sbjct: 69 PDVAAVEPV 77
>gi|90655381|gb|ABD96222.1| NifU-like protein [uncultured marine type-A Synechococcus GOM 3M9]
Length = 81
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD +RP + DGG++ IV + ++GAC CPS++ TLK G+ +
Sbjct: 11 ENVEKVLDE-LRPFLMADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLKMGIERKMRE 69
Query: 179 FVPEVKDIRTV 189
+PEV ++ V
Sbjct: 70 AIPEVSEVVQV 80
>gi|149374734|ref|ZP_01892507.1| Thioredoxin-like protein [Marinobacter algicola DG893]
gi|149360623|gb|EDM49074.1| Thioredoxin-like protein [Marinobacter algicola DG893]
Length = 195
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
++ ++ + RI+ +L + + P +A GG++ + + + I L G C GC + S TLK
Sbjct: 104 VDENAPLPDRIQYILASEINPNLAAHGGEVSLVEVAEESIAVLRFGGGCQGCSAVSLTLK 163
Query: 170 YGVANILNHFVPEVKDIRTV 189
GV + L VPE+ +R V
Sbjct: 164 QGVESTLKERVPEITAVRDV 183
>gi|260436644|ref|ZP_05790614.1| NifU domain protein [Synechococcus sp. WH 8109]
gi|260414518|gb|EEX07814.1| NifU domain protein [Synechococcus sp. WH 8109]
Length = 76
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ +++VLD +RP + DGG++ IV + ++GAC CPS++ TLK G+ +
Sbjct: 5 LENVEKVLDE-LRPFLMADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLKMGIERKMR 63
Query: 178 HFVPEVKDIRTV 189
+PEV ++ V
Sbjct: 64 ESIPEVSEVVQV 75
>gi|190575128|ref|YP_001972973.1| putative iron-sulphur cluster/NifU like protein [Stenotrophomonas
maltophilia K279a]
gi|254767331|sp|B2FM87|NFUA_STRMK RecName: Full=Fe/S biogenesis protein nfuA
gi|190013050|emb|CAQ46682.1| putative iron-sulphur cluster/NifU like protein [Stenotrophomonas
maltophilia K279a]
Length = 199
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVA 173
+++V+R+ V++N + P +A GG + + +G+V L G C GC A TLK G+
Sbjct: 107 ASLVERVHWVVENEINPQLASHGGKVAVQEVSAEGVVLLRFGGGCQGCGMADVTLKQGIE 166
Query: 174 NILNHFVPEVKDIR 187
L VP V +R
Sbjct: 167 KTLMGRVPGVTAVR 180
>gi|326526691|dbj|BAK00734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
E++ + VRP + DGG++V +V L ++GAC CP++ T+K G+ L +PE
Sbjct: 80 ELVLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGACGSCPASVTTMKMGIERRLMEKIPE 139
Query: 183 V 183
+
Sbjct: 140 I 140
>gi|194319991|pdb|2Z51|A Chain A, Crystal Structure Of Arabidopsis Cnfu Involved In Iron-
Sulfur Cluster Biosynthesis
Length = 154
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD +RP + DGG++ +V + ++GAC CPS++ T+K G+ L
Sbjct: 7 ENVESVLDE-IRPYLMSDGGNVALHEIDGNVVRVKLQGACGSCPSSTMTMKMGIERRLME 65
Query: 179 FVPEV 183
+PE+
Sbjct: 66 KIPEI 70
>gi|332878832|ref|ZP_08446547.1| NifU-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332683183|gb|EGJ56065.1| NifU-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 78
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILN 177
+ +K LD ++RP + DGGDI D IV + + G C+ C TLK GV +
Sbjct: 8 EEVKNALD-KIRPYLQNDGGDITLVDIEDDKIVKVRLEGTCTNCAVNQMTLKSGVEMTIK 66
Query: 178 HFVPEVKDI 186
FVP+++ +
Sbjct: 67 EFVPQIEQV 75
>gi|78185152|ref|YP_377587.1| NifU-like protein [Synechococcus sp. CC9902]
gi|78169446|gb|ABB26543.1| NifU-like protein [Synechococcus sp. CC9902]
Length = 81
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + + +++VLD +RP + DGG++ IV + ++GAC CPS++ TLK G
Sbjct: 4 ETMALTLDNVEKVLDE-LRPFLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDIRTV 189
+ + +PEV ++ V
Sbjct: 63 IERKMRESIPEVSEVVQV 80
>gi|34558002|ref|NP_907817.1| hypothetical protein WS1690 [Wolinella succinogenes DSM 1740]
gi|34483720|emb|CAE10717.1| conserved hypothetical protein-Thioredoxin-like proteins and
domains [Wolinella succinogenes]
Length = 91
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD +++ ++ VL+ +VRP +A DGGD+ G V++ + GAC GC S++ TLK G+
Sbjct: 5 SDDDLLKPVERVLE-KVRPTLALDGGDVSLIGVAAPKVYVRLEGACKGCASSALTLKNGI 63
>gi|326530153|dbj|BAK08356.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 227
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
E++ + VRP + DGG++V +V L ++GAC CP++ T+K G+ L +PE
Sbjct: 82 ELVLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGACGSCPASVTTMKMGIERRLMEKIPE 141
Query: 183 V 183
+
Sbjct: 142 I 142
>gi|15597044|ref|NP_250538.1| hypothetical protein PA1847 [Pseudomonas aeruginosa PAO1]
gi|107101280|ref|ZP_01365198.1| hypothetical protein PaerPA_01002314 [Pseudomonas aeruginosa PACS2]
gi|116049799|ref|YP_791394.1| hypothetical protein PA14_40630 [Pseudomonas aeruginosa UCBPP-PA14]
gi|152984911|ref|YP_001348805.1| hypothetical protein PSPA7_3445 [Pseudomonas aeruginosa PA7]
gi|218892197|ref|YP_002441064.1| hypothetical protein PLES_34781 [Pseudomonas aeruginosa LESB58]
gi|254234942|ref|ZP_04928265.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254240240|ref|ZP_04933562.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296389760|ref|ZP_06879235.1| hypothetical protein PaerPAb_16491 [Pseudomonas aeruginosa PAb1]
gi|313110548|ref|ZP_07796433.1| hypothetical protein PA39016_002410135 [Pseudomonas aeruginosa
39016]
gi|51702153|sp|Q9I2P8|NFUA_PSEAE RecName: Full=Fe/S biogenesis protein nfuA
gi|122258910|sp|Q02KZ2|NFUA_PSEAB RecName: Full=Fe/S biogenesis protein nfuA
gi|254767309|sp|A6V6X0|NFUA_PSEA7 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767310|sp|B7VB28|NFUA_PSEA8 RecName: Full=Fe/S biogenesis protein nfuA
gi|9947835|gb|AAG05236.1|AE004611_1 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115585020|gb|ABJ11035.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126166873|gb|EAZ52384.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126193618|gb|EAZ57681.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|150960069|gb|ABR82094.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
gi|218772423|emb|CAW28205.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
gi|310882935|gb|EFQ41529.1| hypothetical protein PA39016_002410135 [Pseudomonas aeruginosa
39016]
Length = 194
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETL 168
+ DS + +RI L + P +A GG + + D I L G C GC TL
Sbjct: 103 MVNEDSPITERINYYLQTEINPGLASHGGQVSLVDVVEDNIAVLRFGGGCQGCGMVDMTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K GV L +PE+K +R V
Sbjct: 163 KDGVEKTLIERIPELKGVRDV 183
>gi|302792717|ref|XP_002978124.1| hypothetical protein SELMODRAFT_108525 [Selaginella moellendorffii]
gi|300154145|gb|EFJ20781.1| hypothetical protein SELMODRAFT_108525 [Selaginella moellendorffii]
Length = 185
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD VRP + DGG++ + +V L ++GAC CPS+ T+K G+ L
Sbjct: 38 ENVEMVLDE-VRPYLMSDGGNVALEEIDGLVVKLKLQGACGSCPSSLMTMKMGIEARLKE 96
Query: 179 FVPEVKDIRTV 189
+PE+ + V
Sbjct: 97 KIPEIIGVEQV 107
>gi|268323348|emb|CBH36936.1| conserved hypothetical protein, NifU-like domain family [uncultured
archaeon]
Length = 87
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANI 175
+++ +K V++ +RP + +GG I KG D G+V + + GAC+GCP + TL V
Sbjct: 1 MLEEVKGVIEKDIRPLLEMEGGSIELKGVDDDGVVRVQLTGACAGCPMSQYTLVNFVEAT 60
Query: 176 LNHFVPEVKDI 186
L VP VK +
Sbjct: 61 LKDKVPGVKQV 71
>gi|49082646|gb|AAT50723.1| PA1847 [synthetic construct]
Length = 195
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETL 168
+ DS + +RI L + P +A GG + + D I L G C GC TL
Sbjct: 103 MVNEDSPITERINYYLQTEINPGLASHGGQVSLVDVVEDNIAVLRFGGGCQGCGMVDMTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K GV L +PE+K +R V
Sbjct: 163 KDGVEKTLIERIPELKGVRDV 183
>gi|194366446|ref|YP_002029056.1| HesB/YadR/YfhF-family protein [Stenotrophomonas maltophilia R551-3]
gi|254767330|sp|B4SPV3|NFUA_STRM5 RecName: Full=Fe/S biogenesis protein nfuA
gi|194349250|gb|ACF52373.1| HesB/YadR/YfhF-family protein [Stenotrophomonas maltophilia R551-3]
Length = 199
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVA 173
+++V+R+ V++N + P +A GG + + +G+V L G C GC A TLK G+
Sbjct: 107 ASLVERVHWVVENEINPQLASHGGKVAVQEVSAEGVVLLRFGGGCQGCGMADVTLKQGIE 166
Query: 174 NILNHFVPEVKDIR 187
L VP V +R
Sbjct: 167 KTLMGRVPGVTAVR 180
>gi|254430627|ref|ZP_05044330.1| NifU domain protein [Cyanobium sp. PCC 7001]
gi|197625080|gb|EDY37639.1| NifU domain protein [Cyanobium sp. PCC 7001]
Length = 88
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ ++ LD +RP + DGG++ IV + ++GAC CPS++ TLK G+ L
Sbjct: 17 IENVERTLDE-LRPYLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKLR 75
Query: 178 HFVPEVKDI 186
+PEV ++
Sbjct: 76 EAIPEVSEV 84
>gi|145334787|ref|NP_001078739.1| NFU2 (NIFU-LIKE PROTEIN 2); structural molecule [Arabidopsis
thaliana]
gi|222422967|dbj|BAH19468.1| AT5G49940 [Arabidopsis thaliana]
gi|332008491|gb|AED95874.1| NifU-like protein 2 [Arabidopsis thaliana]
Length = 185
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD +RP + DGG++ IV + ++GAC CPS++ T+K G+ L
Sbjct: 88 ENVESVLDE-IRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRLME 146
Query: 179 FVPEV 183
+PE+
Sbjct: 147 KIPEI 151
>gi|317967928|ref|ZP_07969318.1| NifU-like protein [Synechococcus sp. CB0205]
Length = 92
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ ++ LD +RP + DGG++ IV + ++GAC CPS++ TLK G+ L
Sbjct: 21 IENVERTLDE-LRPYLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKLR 79
Query: 178 HFVPEVKDI 186
+PEV ++
Sbjct: 80 EAIPEVSEV 88
>gi|255083372|ref|XP_002504672.1| predicted protein [Micromonas sp. RCC299]
gi|226519940|gb|ACO65930.1| predicted protein [Micromonas sp. RCC299]
Length = 192
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 106 GSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSAS 165
G E +++VLD VRP + DGGD+ +V L + GAC CPS++
Sbjct: 31 GESSISEKLELTADNVEKVLDE-VRPYLIADGGDVELVEIDGLVVRLKLNGACGSCPSST 89
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
T++ G+ L +PE+ ++ +
Sbjct: 90 VTMRMGIEKRLMEKIPEIMEVEQI 113
>gi|193215039|ref|YP_001996238.1| nitrogen-fixing NifU domain-containing protein [Chloroherpeton
thalassium ATCC 35110]
gi|193088516|gb|ACF13791.1| nitrogen-fixing NifU domain protein [Chloroherpeton thalassium ATCC
35110]
Length = 95
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETL 168
++ + + R+ E L N +RP + DGGD G D +V L + GAC CP ++ TL
Sbjct: 15 YLPGNDPIYARVTEAL-NSIRPYLQADGGDCELVGITDEQVVDLRLVGACGSCPMSAMTL 73
Query: 169 KYGVANILNHFVPEV 183
+ GV + VPE+
Sbjct: 74 RAGVEQAIKRAVPEI 88
>gi|226225813|ref|YP_002759919.1| hypothetical protein GAU_0407 [Gemmatimonas aurantiaca T-27]
gi|226089004|dbj|BAH37449.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 296
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
R+ V++N +RP GGD+ VF+ + G+C+GC +S TL+ G+ L
Sbjct: 105 RVARVVEN-LRPYTQSHGGDVTLVDVTSDTVFVKLSGSCNGCSMSSVTLRNGIEEALKEQ 163
Query: 180 VPEVKDIRTV 189
VPE+ I V
Sbjct: 164 VPEITRIEVV 173
>gi|153833894|ref|ZP_01986561.1| thioredoxin [Vibrio harveyi HY01]
gi|156972936|ref|YP_001443843.1| putative DNA uptake protein [Vibrio harveyi ATCC BAA-1116]
gi|166990532|sp|A7MST1|NFUA_VIBHB RecName: Full=Fe/S biogenesis protein nfuA
gi|148869732|gb|EDL68709.1| thioredoxin [Vibrio harveyi HY01]
gi|156524530|gb|ABU69616.1| hypothetical protein VIBHAR_00614 [Vibrio harveyi ATCC BAA-1116]
Length = 194
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +V+R++ V+ +V P +A GG + + + DGI ++ G C+GC TLK
Sbjct: 103 VSDDAPLVERVEYVIQTQVNPQLAGHGGHVNLVEITDDGIAIVAFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN FV E+ +R
Sbjct: 163 EGIEKELLNQFVGELTAVR 181
>gi|254228559|ref|ZP_04921984.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262392653|ref|YP_003284507.1| NfuA Fe-S protein maturation [Vibrio sp. Ex25]
gi|151938941|gb|EDN57774.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262336247|gb|ACY50042.1| NfuA Fe-S protein maturation [Vibrio sp. Ex25]
Length = 194
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +V+R++ V+ +V P +A GG + + + DGI ++ G C+GC TLK
Sbjct: 103 VADDAPLVERVEYVIQTQVNPQLAGHGGHVNLVEITEDGIAIVAFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F+ E+ +R
Sbjct: 163 EGIEKELLNQFIGELTAVR 181
>gi|320354901|ref|YP_004196240.1| Fe-S cluster assembly protein NifU [Desulfobulbus propionicus DSM
2032]
gi|320123403|gb|ADW18949.1| Fe-S cluster assembly protein NifU [Desulfobulbus propionicus DSM
2032]
Length = 278
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++I+EV++ ++P + +DGGDI V +S+RG+C+ C S+ TLK V L
Sbjct: 206 IKKIEEVIEREIKPTLKKDGGDIQLIDVDGDFVTVSLRGSCANCYSSRTTLKEYVEKKLR 265
Query: 178 HFVPE 182
V E
Sbjct: 266 EQVLE 270
>gi|284931439|gb|ADC31377.1| conserved hypothetical protein [Mycoplasma gallisepticum str. F]
Length = 99
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 137 GGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
GGD+ F+GY GIV + + G C GC T K GV IL +PEVK +
Sbjct: 27 GGDLSFEGYEKGIVTIRLLGNCDGCSLVDMTYKDGVETILKAEIPEVKSV 76
>gi|46580957|ref|YP_011765.1| NifU family protein [Desulfovibrio vulgaris str. Hildenborough]
gi|46450377|gb|AAS97025.1| NifU family protein [Desulfovibrio vulgaris str. Hildenborough]
Length = 81
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 129 VRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
VRP + +DGGD+ +G+V + + G C GCP + +TLK V ++ FVP V+ +
Sbjct: 18 VRPLLQQDGGDVELVDITPEGVVRVRLTGRCKGCPMSQKTLKNSVEKMVLKFVPAVQRVE 77
Query: 188 TV 189
V
Sbjct: 78 AV 79
>gi|302342126|ref|YP_003806655.1| Fe-S cluster assembly protein NifU [Desulfarculus baarsii DSM 2075]
gi|301638739|gb|ADK84061.1| Fe-S cluster assembly protein NifU [Desulfarculus baarsii DSM 2075]
Length = 285
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
++E L+ VRPA+ +DGGDI V +S+RG CS C ++ TL V L FV
Sbjct: 215 VEETLEREVRPALKQDGGDIELIDIDGDKVLVSLRGMCSSCAASQATLSQFVQAKLREFV 274
Query: 181 PE 182
+
Sbjct: 275 TD 276
>gi|237756604|ref|ZP_04585121.1| conserved domain protein [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691235|gb|EEP60326.1| conserved domain protein [Sulfurihydrogenibium yellowstonense SS-5]
Length = 73
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
Q ++E+LD +VRPA+ D G+I + VFL + G C CP A T+K V +
Sbjct: 8 QEVREILD-KVRPALLADAGNIELVKVENDEVFLKLYGTCQTCPVADMTMKDLVIYTIKE 66
Query: 179 FVPEVK 184
+P VK
Sbjct: 67 SLPWVK 72
>gi|148252075|ref|YP_001236660.1| putative nitrogen-fixing NifU, Rieske (2Fe-2S) region
[Bradyrhizobium sp. BTAi1]
gi|146404248|gb|ABQ32754.1| putative nitrogen-fixing NifU , Rieske (2Fe-2S) region
[Bradyrhizobium sp. BTAi1]
Length = 289
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+R++ LD+ VRP +A GGD+ R + + GAC GCP+++ T GV +
Sbjct: 96 ERLETALDS-VRPILASHGGDVELIAVRPPAIEVRFTGACDGCPASALTFHAGVKKAVEE 154
Query: 179 FVPEVKDIRTV 189
PE+ DI V
Sbjct: 155 ACPEITDILQV 165
>gi|255637868|gb|ACU19253.1| unknown [Glycine max]
Length = 219
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD +RP + DGG++ +V L ++GAC CPS+ T+K G+ L
Sbjct: 72 ENVESVLDE-IRPYLIADGGNVALHQIDGNVVRLKLQGACGSCPSSVTTMKMGIERRLME 130
Query: 179 FVPEV 183
+PE+
Sbjct: 131 KIPEI 135
>gi|318040472|ref|ZP_07972428.1| NifU-like protein [Synechococcus sp. CB0101]
Length = 96
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ ++ LD +RP + DGG++ IV + ++GAC CPS++ TLK G+ L
Sbjct: 25 IENVERTLDE-LRPYLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKLR 83
Query: 178 HFVPEVKDI 186
+PEV ++
Sbjct: 84 EAIPEVSEV 92
>gi|295098862|emb|CBK87951.1| Thioredoxin-like proteins and domains [Eubacterium cylindroides
T2-87]
Length = 83
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
E +++RP + DGGDI G + V+++ RGAC+GC A+E G+ +L VP
Sbjct: 15 EACLDKIRPYIQHDGGDIELLGIDEHAYVYVAFRGACAGCMMATEDFSSGIKLLLMDEVP 74
Query: 182 EVKDIRTV 189
++D+ V
Sbjct: 75 GIRDVILV 82
>gi|188997215|ref|YP_001931466.1| nitrogen-fixing NifU domain protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932282|gb|ACD66912.1| nitrogen-fixing NifU domain protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 84
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
Q ++E+LD +VRPA+ D G+I + VFL + G C CP A T+K V +
Sbjct: 8 QEVREILD-KVRPALLADAGNIELVKVENDEVFLKLYGTCQTCPVADMTMKDLVIYTIKE 66
Query: 179 FVPEVKDI 186
+P VK +
Sbjct: 67 SLPWVKAV 74
>gi|307105277|gb|EFN53527.1| hypothetical protein CHLNCDRAFT_58507 [Chlorella variabilis]
Length = 496
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V+ + LD+ VRP + DGG++ DG VFL ++GAC CPS++ T+K G+ L
Sbjct: 340 TVEAVDAALDD-VRPYLIADGGNVDVVAVEDGRVFLQLQGACGTCPSSTATMKMGIERSL 398
Query: 177 N 177
Sbjct: 399 K 399
>gi|269959406|ref|ZP_06173789.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835843|gb|EEZ89919.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 194
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +V+R++ V+ +V P +A GG + + + DGI ++ G C+GC TLK
Sbjct: 103 VADDAPLVERVEYVIQTQVNPQLAGHGGHVNLVEITDDGIAIVAFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN FV E+ +R
Sbjct: 163 EGIEKELLNQFVGELTAVR 181
>gi|75910444|ref|YP_324740.1| Fe-S cluster assembly protein NifU [Anabaena variabilis ATCC 29413]
gi|1236928|gb|AAA93019.1| NifU2 [Anabaena variabilis ATCC 29413]
gi|75704169|gb|ABA23845.1| Fe-S cluster assembly protein NifU [Anabaena variabilis ATCC 29413]
Length = 309
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I++VLD VRP + DGGDI + V + ++GAC CPS++ TLK V L V
Sbjct: 231 IQKVLDEEVRPLLIADGGDIELYDVQGDNVQVVLQGACGSCPSSTATLKVAVEAKLQERV 290
Query: 181 PEVKDIRTV 189
+ + V
Sbjct: 291 SQSLRVEAV 299
>gi|242082972|ref|XP_002441911.1| hypothetical protein SORBIDRAFT_08g004740 [Sorghum bicolor]
gi|241942604|gb|EES15749.1| hypothetical protein SORBIDRAFT_08g004740 [Sorghum bicolor]
Length = 227
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
++ VLD VRP + DGGD+ +V L ++GAC CPS+ T+K + L +
Sbjct: 81 VESVLDE-VRPYLIADGGDVALHEINGNVVRLKLQGACGSCPSSVTTMKMRIQRRLMENI 139
Query: 181 PEVKDIRTV 189
PE+ + V
Sbjct: 140 PEISAVERV 148
>gi|108805648|ref|YP_645585.1| nitrogen-fixing NifU-like protein [Rubrobacter xylanophilus DSM
9941]
gi|108766891|gb|ABG05773.1| nitrogen-fixing NifU-like protein [Rubrobacter xylanophilus DSM
9941]
Length = 80
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGD--IVFKGYRDGIVFLSMRGACSGCPSASETL 168
+E+ + R++ L +VRPA+ DGGD +V G V + M GACSGCP +
Sbjct: 1 MEAKPDMRSRVEAAL-GKVRPAMQADGGDARVVDCDEETGSVKIQMLGACSGCPLSQLDF 59
Query: 169 KYGVANILNHFVPEVKDIRTV 189
Y + +++ VPEV++I V
Sbjct: 60 VYAIESLIRREVPEVREILAV 80
>gi|120601745|ref|YP_966145.1| NifU domain-containing protein [Desulfovibrio vulgaris DP4]
gi|120561974|gb|ABM27718.1| nitrogen-fixing NifU domain protein [Desulfovibrio vulgaris DP4]
gi|311234644|gb|ADP87498.1| nitrogen-fixing NifU domain protein [Desulfovibrio vulgaris RCH1]
Length = 75
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 129 VRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
VRP + +DGGD+ +G+V + + G C GCP + +TLK V ++ FVP V+ +
Sbjct: 12 VRPLLQQDGGDVELVDITPEGVVRVRLTGRCKGCPMSQKTLKNSVEKMVLKFVPAVQRVE 71
Query: 188 TV 189
V
Sbjct: 72 AV 73
>gi|225448154|ref|XP_002264418.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297739542|emb|CBI29724.3| unnamed protein product [Vitis vinifera]
Length = 227
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 114 DSAV-----VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
DSAV + ++ VLD +RP + DGG++ +V L ++GAC CPS+ T+
Sbjct: 70 DSAVELPLTAENVESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTM 128
Query: 169 KYGVANILNHFVPEV 183
K G+ L +PE+
Sbjct: 129 KMGIERRLMEKIPEI 143
>gi|303290897|ref|XP_003064735.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453761|gb|EEH51069.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 153
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD VRP + DGGD+ +V L + GAC CPS++ T++ G+ L
Sbjct: 6 ENVEKVLDE-VRPYLIADGGDVELVEIDGLVVRLKLNGACGSCPSSTVTMRMGIERRLLE 64
Query: 179 FVPEV 183
+PE+
Sbjct: 65 VIPEI 69
>gi|88809237|ref|ZP_01124746.1| NifU-like protein [Synechococcus sp. WH 7805]
gi|88787179|gb|EAR18337.1| NifU-like protein [Synechococcus sp. WH 7805]
Length = 81
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD +RP + DGG++ +V + ++GAC CPS++ TLK G+ +
Sbjct: 11 ENVEKVLDE-LRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMGIERKMRE 69
Query: 179 FVPEVKDI 186
+PEV ++
Sbjct: 70 TIPEVSEV 77
>gi|417363|sp|P33179|NIFU_ANASL RecName: Full=Nitrogen fixation protein nifU
gi|2126543|pir||I39609 nifU protein - Anabaena sp. (fragment)
gi|142056|gb|AAA22013.1| NifU [Anabaena sp. L-31]
Length = 112
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
I++VLD VRP + DGGD+ IV + ++GAC CPS++ TLK + + L
Sbjct: 44 IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIESRL 99
>gi|148238937|ref|YP_001224324.1| NifU-like protein [Synechococcus sp. WH 7803]
gi|147847476|emb|CAK23027.1| NifU-like protein [Synechococcus sp. WH 7803]
Length = 81
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD +RP + DGG++ +V + ++GAC CPS++ TLK G+ +
Sbjct: 11 ENVEKVLDE-LRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMGIERKMRE 69
Query: 179 FVPEVKDIRTV 189
+PEV ++ V
Sbjct: 70 AIPEVSEVVQV 80
>gi|311694682|gb|ADP97555.1| yhgI protein [marine bacterium HP15]
Length = 195
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
I+ D+ + R+ +L + + P +A GG++ D + L G C GC + S TLK
Sbjct: 104 IDDDAPLPDRVNYILASEINPNLAAHGGEVSLVEIVDESVAVLRFGGGCQGCSAVSLTLK 163
Query: 170 YGVANILNHFVPEVKDIRTV 189
GV + L VPE+ +R V
Sbjct: 164 QGVESTLKERVPEITAVRDV 183
>gi|116073290|ref|ZP_01470552.1| NifU-like protein [Synechococcus sp. RS9916]
gi|116068595|gb|EAU74347.1| NifU-like protein [Synechococcus sp. RS9916]
Length = 81
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD +RP + DGG++ +V + ++GAC CPS++ TLK G+ +
Sbjct: 11 ENVEKVLDE-LRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMGIERKMRE 69
Query: 179 FVPEVKDI 186
+PEV ++
Sbjct: 70 AIPEVSEV 77
>gi|83815451|ref|YP_444955.1| hypothetical protein SRU_0820 [Salinibacter ruber DSM 13855]
gi|294506813|ref|YP_003570871.1| hypothetical protein SRM_00998 [Salinibacter ruber M8]
gi|83756845|gb|ABC44958.1| conserved domain protein [Salinibacter ruber DSM 13855]
gi|294343141|emb|CBH23919.1| conserved hypothetical protein [Salinibacter ruber M8]
Length = 101
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
D + I+E LD +RP + DGG + + D +V L + GAC CP ++ TL+ G+
Sbjct: 20 DPELRDNIEEALDT-IRPYLMADGGSVRLLNVTADYVVELELLGACGSCPMSTMTLRAGI 78
Query: 173 ANILNHFVPEVKDIRTV 189
L VP+VK + V
Sbjct: 79 EQALKRSVPKVKRVEAV 95
>gi|125995235|dbj|BAF47150.1| NifU [Gloeothece sp. KO68DGA]
Length = 293
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV-ANILNHF 179
I++VL+ V+PA+A+DGGD +V + ++GAC C S+++TLK + A + +
Sbjct: 225 IQQVLEEEVKPALAQDGGDCDLFDVDGDLVKVVLKGACGSCASSTQTLKIAIEARLRDRI 284
Query: 180 VPEV 183
PE+
Sbjct: 285 SPEL 288
>gi|303233008|ref|ZP_07319687.1| NifU-like protein [Atopobium vaginae PB189-T1-4]
gi|302480879|gb|EFL43960.1| NifU-like protein [Atopobium vaginae PB189-T1-4]
Length = 178
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANI 175
+ + I E + +R ++ DGGD+V D G+V L M GAC+GCP + + G+ I
Sbjct: 102 INREILEATIDVIRESLQADGGDVVLVNVSDDGVVTLEMTGACAGCPLSEYDMTEGIERI 161
Query: 176 LNHFVPEVKDIR 187
L VP V +
Sbjct: 162 LKEHVPGVTKVE 173
>gi|255576215|ref|XP_002529001.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
gi|223531541|gb|EEF33371.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
Length = 226
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD VRP + DGG++ +V L ++GAC CPS+ T+K G+ L
Sbjct: 79 ENVESVLDE-VRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 137
Query: 179 FVPEV 183
+PE+
Sbjct: 138 KIPEI 142
>gi|323483740|ref|ZP_08089120.1| nitrogen-fixing NifU domain-containing protein [Clostridium
symbiosum WAL-14163]
gi|323692707|ref|ZP_08106936.1| nitrogen-fixing NifU domain-containing protein [Clostridium
symbiosum WAL-14673]
gi|323402931|gb|EGA95249.1| nitrogen-fixing NifU domain-containing protein [Clostridium
symbiosum WAL-14163]
gi|323503261|gb|EGB19094.1| nitrogen-fixing NifU domain-containing protein [Clostridium
symbiosum WAL-14673]
Length = 118
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMR--GACSGCPSASETLKYGV 172
+ +++RI++VL+ VRP++ G++ Y + L +R G CSGCPSA T + +
Sbjct: 2 AEMIERIEKVLEQDVRPSLLSHEGNVQIVSYEEKSKILRVRLTGQCSGCPSAQLTTEEVI 61
Query: 173 ANILNHFVPEVKDI 186
+ +PEV+ +
Sbjct: 62 EKAVKEKIPEVEQV 75
>gi|302766397|ref|XP_002966619.1| hypothetical protein SELMODRAFT_230831 [Selaginella moellendorffii]
gi|300166039|gb|EFJ32646.1| hypothetical protein SELMODRAFT_230831 [Selaginella moellendorffii]
Length = 144
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 124 VLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEV 183
VLD VRP + DGG++ + +V L ++GAC CPS+ T+K G+ L +PE+
Sbjct: 2 VLDE-VRPYLMSDGGNVALEEIDGLVVKLKLQGACGSCPSSLMTMKMGIEARLKEKIPEI 60
Query: 184 KDIRTV 189
+ V
Sbjct: 61 IGVEQV 66
>gi|92114011|ref|YP_573939.1| HesB/YadR/YfhF [Chromohalobacter salexigens DSM 3043]
gi|91797101|gb|ABE59240.1| HesB/YadR/YfhF [Chromohalobacter salexigens DSM 3043]
Length = 196
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ +DS + R+ VL + + P +A GG+I + + + + L G C GC + TLK
Sbjct: 105 VNADSPLEDRVNYVLYSEINPGLAAHGGEIRLMQLTEENVAVLQFGGGCQGCAAVDLTLK 164
Query: 170 YGVANILNHFVPEVKDIRTV 189
GV L VPE+ IR V
Sbjct: 165 EGVEKTLIERVPELAGIRDV 184
>gi|148241647|ref|YP_001226804.1| NifU-like protein [Synechococcus sp. RCC307]
gi|147849957|emb|CAK27451.1| NifU-like protein [Synechococcus sp. RCC307]
Length = 88
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ ++ LD +RP + DGG++ IV + ++GAC CPS++ TLK G+ L
Sbjct: 17 LENVERTLDE-LRPFLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKLR 75
Query: 178 HFVPEVKDI 186
+PEV ++
Sbjct: 76 EAIPEVSEV 84
>gi|91224982|ref|ZP_01260241.1| hypothetical protein V12G01_11188 [Vibrio alginolyticus 12G01]
gi|269965876|ref|ZP_06179969.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|91190228|gb|EAS76498.1| hypothetical protein V12G01_11188 [Vibrio alginolyticus 12G01]
gi|269829429|gb|EEZ83670.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 194
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +V+R++ V+ +V P +A GG + + + DG+ ++ G C+GC TLK
Sbjct: 103 VADDAPLVERVEYVIQTQVNPQLAGHGGHVNLVEITEDGVAIVAFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F+ E+ +R
Sbjct: 163 EGIEKELLNQFIGELTAVR 181
>gi|212711654|ref|ZP_03319782.1| hypothetical protein PROVALCAL_02729 [Providencia alcalifaciens DSM
30120]
gi|212685756|gb|EEB45284.1| hypothetical protein PROVALCAL_02729 [Providencia alcalifaciens DSM
30120]
Length = 192
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 79/172 (45%), Gaps = 16/172 (9%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
HF+ E++ S R+F I PG + G + G + + L+ L ++ +
Sbjct: 11 HFAKLLESQESGTQIRVFVINPGTPTAECGVSYCPPGAVEATDKELKFEKLSAYVDEISA 70
Query: 88 GDPIIHNGGLGDMKLDDMGSGDFIES----------DSAVVQRIKEVLDNRVRPAVARDG 137
P + + + D D +GS +++ D+ +++R++ VL +++ P +A G
Sbjct: 71 --PFLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVSDDAPLIERVEYVLQSQINPQLASHG 127
Query: 138 GDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGV-ANILNHFVPEVKDIR 187
G + + + +G L G C+GC TLK G+ +L F E+K ++
Sbjct: 128 GRVSLMEITEEGFAILQFGGGCNGCSMVDVTLKEGIEKELLKMFEGELKGVK 179
>gi|113954347|ref|YP_729865.1| NifU domain-containing protein [Synechococcus sp. CC9311]
gi|113881698|gb|ABI46656.1| NifU domain protein [Synechococcus sp. CC9311]
Length = 81
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD +RP + DGG++ +V + ++GAC CPS++ TLK G+ +
Sbjct: 11 ENVEKVLDE-LRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMGIERKMRE 69
Query: 179 FVPEVKDI 186
+PEV ++
Sbjct: 70 SIPEVSEV 77
>gi|37524219|ref|NP_927563.1| putative DNA uptake protein [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|51701988|sp|Q7N9W2|NFUA_PHOLL RecName: Full=Fe/S biogenesis protein nfuA
gi|36783642|emb|CAE12493.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 191
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ DS + +R++ VL +++ P +A GG + + + DG L G C+GC TLK
Sbjct: 101 VSDDSPLAERVEYVLQSQINPQLAGHGGRVSLMEITDDGFAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L + PE+K ++
Sbjct: 161 EGIEKELLNMFPELKGVK 178
>gi|116750110|ref|YP_846797.1| Fe-S cluster assembly protein NifU [Syntrophobacter fumaroxidans
MPOB]
gi|116699174|gb|ABK18362.1| Fe-S cluster assembly protein NifU [Syntrophobacter fumaroxidans
MPOB]
Length = 276
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ I+E +D +RP++ +DGGDI V ++ RGAC+ C +A+ TLK V L
Sbjct: 203 IRLIEETIDQEIRPSLKQDGGDIELVDVVGNRVLVATRGACASCQAANRTLKNFVEVKLR 262
Query: 178 HFV-PEV 183
V PE+
Sbjct: 263 ELVLPEL 269
>gi|163802249|ref|ZP_02196144.1| hypothetical protein 1103602000603_AND4_17694 [Vibrio sp. AND4]
gi|159174054|gb|EDP58864.1| hypothetical protein AND4_17694 [Vibrio sp. AND4]
Length = 194
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +V+R++ V+ +V P +A GG + + + DGI ++ G C+GC TLK
Sbjct: 103 VADDAPLVERVEYVIQTQVNPQLAGHGGHVNLVEITDDGIAIVAFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F+ E+ +R
Sbjct: 163 EGIEKELLNQFIGELTAVR 181
>gi|195941174|ref|ZP_03086556.1| putative DNA uptake protein [Escherichia coli O157:H7 str. EC4024]
Length = 152
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + + + DG+ L G C+GC TLK
Sbjct: 62 VSDDAPLMERVEYLLQSQINPQLAGHGGRVSLMEITEDGLAILQFGGGCNGCSMVDVTLK 121
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 122 EGIEKQMLNEF-PELKGVR 139
>gi|226942441|ref|YP_002797514.1| NifU C-terminal domain-containing protein VnfU [Azotobacter
vinelandii DJ]
gi|732317|sp|P40432|YVN2_AZOVI RecName: Full=Uncharacterized 10.3 kDa protein in vnfA 5'region
gi|1088269|gb|AAA82515.1| unknown protein [Azotobacter vinelandii]
gi|226717368|gb|ACO76539.1| NifU C-terminal domain-containing protein, VnfU [Azotobacter
vinelandii DJ]
Length = 96
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
++E ++ R+RP V RDGGD+ +D IV L ++GAC GC +++TL
Sbjct: 28 VRETVE-RLRPGVQRDGGDLELVAVQDNIVRLRLKGACVGCAMSAQTL 74
>gi|293393405|ref|ZP_06637716.1| Fe/S-biogenesis protein NfuA [Serratia odorifera DSM 4582]
gi|291424006|gb|EFE97224.1| Fe/S-biogenesis protein NfuA [Serratia odorifera DSM 4582]
Length = 191
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
++ ++ +++R++ VL +++ P +A GG + + + DG+ L G C+GC TLK
Sbjct: 101 VDENAPLMERVEYVLQSQINPQLAGHGGRVTLMEITEDGLAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLQKFPELKGVR 178
>gi|149371976|ref|ZP_01891295.1| nifU-like domain protein [unidentified eubacterium SCB49]
gi|149355116|gb|EDM43677.1| nifU-like domain protein [unidentified eubacterium SCB49]
Length = 80
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYGVANILNHFVP 181
E+ + +RP + DGGDI+ G DG V + ++GAC GC TLK GV + P
Sbjct: 11 EIALDEIRPFLQTDGGDILLLGIEDGTTVKVQLQGACVGCSVNQMTLKSGVEMTIKKHAP 70
Query: 182 EVKDIRTV 189
+++ + V
Sbjct: 71 QIERVINV 78
>gi|295097023|emb|CBK86113.1| IscR-regulated protein YhgI [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 191
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + + + DG+ L G C+GC TLK
Sbjct: 101 VSDDAPLMERVEYLLQSQINPQLAGHGGRVSLMEITEDGLAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQLLNEF-PELKGVR 178
>gi|91794875|ref|YP_564526.1| putative DNA uptake protein [Shewanella denitrificans OS217]
gi|119370613|sp|Q12IC3|NFUA_SHEDO RecName: Full=Fe/S biogenesis protein nfuA
gi|91716877|gb|ABE56803.1| HesB/YadR/YfhF [Shewanella denitrificans OS217]
Length = 192
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +V+RI+ V+ + + P +A GG+I+ + DG+ L G C+GC TLK
Sbjct: 101 VSGDAPLVERIEYVIQSEINPQLASHGGNIMLVEVTDDGVAVLQFGGGCNGCSQVDITLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L+ F E+ +R V
Sbjct: 161 DGIEKQLLDLFTGELTGVRDV 181
>gi|253746010|gb|EET01549.1| Hypothetical protein GL50581_1173 [Giardia intestinalis ATCC 50581]
Length = 197
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 12/160 (7%)
Query: 37 EISPLASRIFSIPGIASVYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNG 95
E S L + + G+ + +TV + Q W +R + I F P H
Sbjct: 41 EASSLQCDLLKVKGVKKLSITPTGVTVTVRSQGLWPSIRSEIENKIYSAFDPDTP--HTP 98
Query: 96 GLGDMKLDD-MGSGDFIESDSAVVQRIKEVL-DNRVRPAVARDGGDIVFKGYRDG----I 149
+ + D + +G S+ +++ E+L + P +ARDGG +K Y I
Sbjct: 99 DELRLAIQDILSTGSLSPSN---IRKASELLIRAAINPFLARDGGSCSYKRYESTDEGLI 155
Query: 150 VFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
V++ + G CSGC ++ T+ V ++P V ++ +
Sbjct: 156 VYIELHGNCSGCSKSANTMNNFVIGEFKKYIPNVSTVKCI 195
>gi|218185367|gb|EEC67794.1| hypothetical protein OsI_35353 [Oryza sativa Indica Group]
Length = 228
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
E++ + VRP + DGG++ +V L ++GAC CP++ T+K G+ L +PE
Sbjct: 83 EIVLDEVRPYLMADGGNVALHEIDGNVVRLKLQGACGSCPASVTTMKMGIERRLMEKIPE 142
Query: 183 V 183
+
Sbjct: 143 I 143
>gi|115484477|ref|NP_001065900.1| Os11g0181500 [Oryza sativa Japonica Group]
gi|108864066|gb|ABG22389.1| nitrogen fixation protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113644604|dbj|BAF27745.1| Os11g0181500 [Oryza sativa Japonica Group]
gi|215695304|dbj|BAG90495.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765607|dbj|BAG87304.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615626|gb|EEE51758.1| hypothetical protein OsJ_33192 [Oryza sativa Japonica Group]
Length = 228
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
E++ + VRP + DGG++ +V L ++GAC CP++ T+K G+ L +PE
Sbjct: 83 EIVLDEVRPYLMADGGNVALHEIDGNVVRLKLQGACGSCPASVTTMKMGIERRLMEKIPE 142
Query: 183 V 183
+
Sbjct: 143 I 143
>gi|290473229|ref|YP_003466094.1| Fe/S biogenesis protein [Xenorhabdus bovienii SS-2004]
gi|289172527|emb|CBJ79294.1| Fe/S biogenesis protein [Xenorhabdus bovienii SS-2004]
Length = 191
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ VL +++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VTDDAPLIERVEYVLQSQINPQLAGHGGRVSLMEITDAGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L + PE+K +R
Sbjct: 161 EGIEKELLNMFPELKGVR 178
>gi|170078022|ref|YP_001734660.1| NifU like protein [Synechococcus sp. PCC 7002]
gi|169885691|gb|ACA99404.1| NifU like protein [Synechococcus sp. PCC 7002]
Length = 78
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ LD +RP + DGG++ +V L ++GAC CPS++ TL+ G+ L
Sbjct: 6 TTENVEATLDE-LRPYLKADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLRMGIERRL 64
Query: 177 NHFVPEVKDIRTV 189
+PE+ ++ V
Sbjct: 65 RENIPEIAEVEQV 77
>gi|261341914|ref|ZP_05969772.1| IscR-regulated protein YhgI [Enterobacter cancerogenus ATCC 35316]
gi|288315816|gb|EFC54754.1| IscR-regulated protein YhgI [Enterobacter cancerogenus ATCC 35316]
Length = 191
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + + + DG+ L G C+GC TLK
Sbjct: 101 VSDDAPLMERVEYMLQSQINPQLAGHGGRVTLMEITEDGLAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQLLNEF-PELKGVR 178
>gi|110596893|ref|ZP_01385183.1| Nitrogen-fixing NifU-like [Chlorobium ferrooxidans DSM 13031]
gi|110341580|gb|EAT60040.1| Nitrogen-fixing NifU-like [Chlorobium ferrooxidans DSM 13031]
Length = 86
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSAS 165
S D++ + A+ R+ L+ VRP + DGGD G +D +V + + GAC CP ++
Sbjct: 4 SKDYLPNSDAIYDRVIAALET-VRPYLQVDGGDCQLVGISKDMVVDVKLLGACGSCPMST 62
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TL+ GV + PE+ + +V
Sbjct: 63 LTLRAGVEQAIKKANPEIVRVESV 86
>gi|189500939|ref|YP_001960409.1| nitrogen-fixing NifU domain-containing protein [Chlorobium
phaeobacteroides BS1]
gi|189496380|gb|ACE04928.1| nitrogen-fixing NifU domain protein [Chlorobium phaeobacteroides
BS1]
Length = 86
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSAS 165
+ D++ + R+ + L+ VRP + DGGD G +D +V + + GAC CP ++
Sbjct: 4 TKDYLPDTDPLYDRVIKALEE-VRPYLQADGGDCQLVGITKDMLVDVKLLGACGSCPMST 62
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TL+ GV + VPE+ + V
Sbjct: 63 LTLRAGVEQAIKKAVPEIARVEAV 86
>gi|225849266|ref|YP_002729430.1| hypothetical protein SULAZ_1463 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643887|gb|ACN98937.1| conserved domain protein [Sulfurihydrogenibium azorense Az-Fu1]
Length = 84
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
Q +KEVL+ ++RPA+ D G I + VFL + G C CP A T+K V +
Sbjct: 8 QEVKEVLE-KIRPALMADAGKIDLVKIENDEVFLKLYGTCQTCPVADMTMKDLVVYTIKE 66
Query: 179 FVPEVK 184
+P VK
Sbjct: 67 SLPWVK 72
>gi|83645334|ref|YP_433769.1| thioredoxin-like protein [Hahella chejuensis KCTC 2396]
gi|83633377|gb|ABC29344.1| Thioredoxin-like protein [Hahella chejuensis KCTC 2396]
Length = 192
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
++ S + RI +L + P +A GG++ D + L G C GC + TLK
Sbjct: 102 VDESSPLPDRINYILYTEINPGLASHGGEVSLVEVVDDVAVLKFGGGCQGCSAVDFTLKQ 161
Query: 171 GVANILNHFVPEVKDIR 187
GV L +PE+K +R
Sbjct: 162 GVEKTLLSKIPELKGVR 178
>gi|254480747|ref|ZP_05093994.1| IscR-regulated protein YhgI [marine gamma proteobacterium HTCC2148]
gi|214039330|gb|EEB79990.1| IscR-regulated protein YhgI [marine gamma proteobacterium HTCC2148]
Length = 191
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
++ +S + RI VL N V PA+A GG++ + + D L G C GC + +TLK
Sbjct: 101 VDENSPMEDRINYVLYNEVNPALAAHGGEVSLVEITEDNFAVLRFGGGCQGCSAVDQTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
GV L +P++ +R
Sbjct: 161 GGVEKTLLEQLPQLAGVR 178
>gi|285018390|ref|YP_003376101.1| protein gnty [Xanthomonas albilineans GPE PC73]
gi|283473608|emb|CBA16111.1| probable protein gnty [Xanthomonas albilineans]
Length = 198
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVA 173
+++V+R++ V++N V P +A GG + + DG+V L G C GC A TLK G+
Sbjct: 106 ASLVERVRWVVENEVNPQLAEHGGRVAVQEVSADGVVVLRFGGGCHGCGMADVTLKQGIE 165
Query: 174 NILNHFVPEVKDIR 187
L V V +R
Sbjct: 166 KTLMGRVSGVTAVR 179
>gi|146313459|ref|YP_001178533.1| putative DNA uptake protein [Enterobacter sp. 638]
gi|166990523|sp|A4WFK2|NFUA_ENT38 RecName: Full=Fe/S biogenesis protein nfuA
gi|145320335|gb|ABP62482.1| HesB/YadR/YfhF-family protein [Enterobacter sp. 638]
Length = 191
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + + + DG+ L G C+GC TLK
Sbjct: 101 VSDDAPLMERVEYLLQSQINPQLAGHGGRVTLMEITEDGLAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQMLNEF-PELKGVR 178
>gi|194337374|ref|YP_002019168.1| nitrogen-fixing NifU domain protein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309851|gb|ACF44551.1| nitrogen-fixing NifU domain protein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 86
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSAS 165
+ D++ + A+ R+ L+ VRP + DGGD G +D V + + GAC CP ++
Sbjct: 4 TKDYLPNSDALYDRVIAALET-VRPYLQVDGGDCQIVGITKDMTVDVKLLGACGSCPMST 62
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TL+ GV + VPE+ + +V
Sbjct: 63 LTLRAGVEQAIKKAVPEIVRVESV 86
>gi|320354022|ref|YP_004195361.1| nitrogen-fixing NifU domain-containing protein [Desulfobulbus
propionicus DSM 2032]
gi|320122524|gb|ADW18070.1| nitrogen-fixing NifU domain protein [Desulfobulbus propionicus DSM
2032]
Length = 77
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 128 RVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
++RP + RDGGD+ F D I+ + + GAC GCP + TLK G+ + +P ++ +
Sbjct: 14 QIRPTLQRDGGDVEFVELGPDQILKVRLTGACQGCPMSRITLKEGIEKFVKGELPTIRAV 73
Query: 187 RTV 189
V
Sbjct: 74 EAV 76
>gi|253987620|ref|YP_003038976.1| DNA uptake protein [Photorhabdus asymbiotica subsp. asymbiotica
ATCC 43949]
gi|253779070|emb|CAQ82230.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 191
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +V+R++ VL +++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VSDDAPLVERVEYVLQSQINPQLAGHGGRVSLMEITDEGFAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L + PE+K ++
Sbjct: 161 EGIEKELLNMFPELKGVK 178
>gi|68349029|gb|AAY96420.1| YhgI [Halomonas elongata]
Length = 196
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ +DS + R+ VL + + P +A GG+I + + + + L+ G C GC + TLK
Sbjct: 105 VNADSPLEDRVNYVLYSEINPGLAAHGGEIKLVQLTEEQVAVLAFGGGCQGCAAVDLTLK 164
Query: 170 YGVANILNHFVPEVKDIRTV 189
GV L +PE+ IR V
Sbjct: 165 EGVERTLMERIPELSGIRDV 184
>gi|225012595|ref|ZP_03703030.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-2A]
gi|225003128|gb|EEG41103.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-2A]
Length = 84
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYGVANILNH 178
+I+E L+ +RP + DGGDI DG V + + GAC GC TLK GV +
Sbjct: 9 KIREALE-EIRPFLKSDGGDISLVSVEDGKHVKVQLHGACVGCSVNQMTLKSGVELTIKK 67
Query: 179 FVPEVKDIRTV 189
++P+++ + ++
Sbjct: 68 YLPQIETVTSI 78
>gi|226495405|ref|NP_001148901.1| NFU3 [Zea mays]
gi|195623070|gb|ACG33365.1| NFU3 [Zea mays]
Length = 226
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD VRP + DGG++ +V L ++GAC CP++ T+K G+ L
Sbjct: 78 ENVEMVLDE-VRPYLMADGGNVALHEIDGNVVRLKLQGACGSCPASVTTMKMGIERRLME 136
Query: 179 FVPEV 183
+PE+
Sbjct: 137 KIPEI 141
>gi|62734078|gb|AAX96187.1| Similar to seven transmembrane protein Mlo4 [Oryza sativa Japonica
Group]
Length = 980
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
E++ + VRP + DGG++ +V L ++GAC CP++ T+K G+ L +PE
Sbjct: 576 EIVLDEVRPYLMADGGNVALHEIDGNVVRLKLQGACGSCPASVTTMKMGIERRLMEKIPE 635
Query: 183 V 183
+
Sbjct: 636 I 636
>gi|88703284|ref|ZP_01101000.1| HesB/YadR/YfhF family protein [Congregibacter litoralis KT71]
gi|88701998|gb|EAQ99101.1| HesB/YadR/YfhF family protein [Congregibacter litoralis KT71]
Length = 191
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ DS + RI VL N V P++A GG++ + + D L G C GC + TLK
Sbjct: 101 VSDDSPIEDRINYVLYNEVNPSLAAHGGEVSLVEVTDDAFAVLRFGGGCQGCSAVDMTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
GV L +P++K +R
Sbjct: 161 DGVEKTLLDQLPQLKGVR 178
>gi|156743727|ref|YP_001433856.1| NifU domain-containing protein [Roseiflexus castenholzii DSM 13941]
gi|156235055|gb|ABU59838.1| nitrogen-fixing NifU domain protein [Roseiflexus castenholzii DSM
13941]
Length = 291
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+V R+ VLD RP + GGD+ R+ +V++ + G+C+GC ++ TL+ + L
Sbjct: 95 IVARVSRVLDA-ARPYIRSHGGDVELVEVRENVVYVRLHGSCNGCSLSAVTLRNEIEAAL 153
Query: 177 NHFVPEVKDIRTV 189
VPE+ ++ V
Sbjct: 154 RANVPEIVGVQVV 166
>gi|195361607|ref|XP_002045503.1| GM19271 [Drosophila sechellia]
gi|194128907|gb|EDW50950.1| GM19271 [Drosophila sechellia]
Length = 110
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH-FSNAKEAEISPLA 42
MFIQT+DTPNP +LKF+PG VL +G + F N A SPL
Sbjct: 67 MFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHSSPLG 109
>gi|255321743|ref|ZP_05362898.1| NifU family protein [Campylobacter showae RM3277]
gi|255301223|gb|EET80485.1| NifU family protein [Campylobacter showae RM3277]
Length = 89
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+D +++ +K L +V P + DGG + G ++G +++ + G C GC ++S TLKYG+
Sbjct: 5 TDEELLKPVKASL-QKVLPMLENDGGGMELLGIKNGKIYVRLTGHCHGCAASSTTLKYGI 63
Query: 173 ANIL 176
L
Sbjct: 64 ERQL 67
>gi|240171478|ref|ZP_04750137.1| hypothetical protein MkanA1_19346 [Mycobacterium kansasii ATCC
12478]
Length = 301
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V +R+ + L+ RVRP + GGD+ D +V L+ G+C CPS++ TL+ V + +
Sbjct: 94 VHRRVSDALE-RVRPYLGSHGGDVDLLEVTDTVVRLAFTGSCKSCPSSAVTLELAVQDAI 152
Query: 177 NHFVPEVKDIRTV 189
PE+ I V
Sbjct: 153 RAAAPEICAIELV 165
>gi|86607917|ref|YP_476679.1| Fe-S cluster assembly protein NifU [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556459|gb|ABD01416.1| Fe-S cluster assembly protein NifU [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 312
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ RI+ VL+ VRP + DGGD+ V++ ++G+C+ CPS TL+ + L
Sbjct: 241 IARIQAVLEEEVRPLLLADGGDVELYDLEGDQVWVRLKGSCTTCPSQQNTLRLLIETRLQ 300
Query: 178 HFV 180
V
Sbjct: 301 EQV 303
>gi|86606476|ref|YP_475239.1| Fe-S cluster assembly protein NifU [Synechococcus sp. JA-3-3Ab]
gi|86555018|gb|ABC99976.1| Fe-S cluster assembly protein NifU [Synechococcus sp. JA-3-3Ab]
Length = 312
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ RI+ VL+ VRP + DGGD+ V++ ++G+C+ CPS TL+ + L
Sbjct: 241 IARIQAVLEEEVRPLLLADGGDVELYDLEGDQVWVRLKGSCTTCPSQQNTLRLLIETRLQ 300
Query: 178 HFV 180
V
Sbjct: 301 EQV 303
>gi|21231527|ref|NP_637444.1| hypothetical protein XCC2079 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768417|ref|YP_243179.1| hypothetical protein XC_2103 [Xanthomonas campestris pv. campestris
str. 8004]
gi|51702176|sp|Q8P8Z9|NFUA_XANCP RecName: Full=Fe/S biogenesis protein nfuA
gi|81305609|sp|Q4UUW4|NFUA_XANC8 RecName: Full=Fe/S biogenesis protein nfuA
gi|21113208|gb|AAM41368.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573749|gb|AAY49159.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 199
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASE 166
G+ +++V+R++ V++N + P +A GG + + +G+V L G C GC A
Sbjct: 100 GEAPAESASMVERVRWVVENEINPQLASHGGRVAVQEVSAEGVVLLRFGGGCHGCGMADV 159
Query: 167 TLKYGVANILNHFVPEVKDIR 187
TLK G+ L +P V +R
Sbjct: 160 TLKQGIEKTLMGRLPGVIAVR 180
>gi|226327547|ref|ZP_03803065.1| hypothetical protein PROPEN_01418 [Proteus penneri ATCC 35198]
gi|225204073|gb|EEG86427.1| hypothetical protein PROPEN_01418 [Proteus penneri ATCC 35198]
Length = 192
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+++D+ +++R++ VL +++ P +A GG + + + DG L G C+GC TLK
Sbjct: 101 VDADAPLIERVEYVLQSQINPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMIDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F E+K ++
Sbjct: 161 DGIEKELLNQFPNELKGVK 179
>gi|218887746|ref|YP_002437067.1| Fe-S cluster assembly protein NifU [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758700|gb|ACL09599.1| Fe-S cluster assembly protein NifU [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 281
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 118 VQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
VQR++ +VL+ +RP + +DGGDI V++++RG C+ CPS+ TL+ V
Sbjct: 205 VQRMQLVLKVLEGEIRPRLQQDGGDIELVDMDGTTVYVALRGMCTSCPSSRLTLEGFVEK 264
Query: 175 ILNHFVPE 182
L V E
Sbjct: 265 TLRDHVDE 272
>gi|298708751|emb|CBJ30713.1| NifU-like protein 2, chloroplast precursor (AtCNfu2) (AtCnfU-V)
[Ectocarpus siliculosus]
Length = 276
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++ ++ VLD +RP + DGG++ +V L + GAC CPS++ T+K G+ L
Sbjct: 123 TLENVETVLDE-MRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLERRL 181
Query: 177 NHFVPEVKDI 186
+PE+ ++
Sbjct: 182 VQRIPEISEV 191
>gi|330443916|ref|YP_004376902.1| NifU-like protein [Chlamydophila pecorum E58]
gi|328807026|gb|AEB41199.1| NifU-like protein [Chlamydophila pecorum E58]
Length = 275
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
IE+ AV++ I E ++ P +A DGG + K + IV ++ G CSGCPS+ T
Sbjct: 182 IENKIAVLRTITE---EKISPYIALDGGAVSIKTLENNIVTIAYSGNCSGCPSSIGTTLN 238
Query: 171 GVANILNHFV-PEVK 184
+ +L +V PE++
Sbjct: 239 SIGQLLRTYVYPELQ 253
>gi|227112203|ref|ZP_03825859.1| putative DNA uptake protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 191
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
++ ++ +++R++ VL +++ P +A GG + D G+ L G C+GC TLK
Sbjct: 101 VDDNAPLMERVEYVLQSQINPQLAGHGGRVTLMEITDDGLAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLQTFPELKGVR 178
>gi|254410535|ref|ZP_05024314.1| Fe-S cluster assembly protein NifU [Microcoleus chthonoplastes PCC
7420]
gi|196182741|gb|EDX77726.1| Fe-S cluster assembly protein NifU [Microcoleus chthonoplastes PCC
7420]
Length = 315
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I++VL+ +RP +A DGGD+ V + ++G+C GCPS TLK + L V
Sbjct: 246 IQQVLETEIRPTLAYDGGDVELYDVEGDRVKVILKGSCDGCPSVMITLKMAIEKRLQERV 305
>gi|56459359|ref|YP_154640.1| putative DNA uptake protein [Idiomarina loihiensis L2TR]
gi|81363232|sp|Q5QZC8|NFUA_IDILO RecName: Full=Fe/S biogenesis protein nfuA
gi|56178369|gb|AAV81091.1| hypothetical protein IL0248 [Idiomarina loihiensis L2TR]
Length = 192
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 16/159 (10%)
Query: 44 RIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKL 102
R+F + PG+A+ G + + D E L P G P + + + D +
Sbjct: 26 RVFVVNPGMANAECGVSYCPPDSVEPDDERL--PFNGFDAVVDSGSAPFLEDAAI-DFEE 82
Query: 103 DDMGS----------GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVF 151
+MGS + D+ +++R++ V+ + P +A GG ++ D G+
Sbjct: 83 QEMGSQLTLKAPNAKARKVADDAPLIERVEYVIQAEINPQLASHGGQVMISEITDDGVAI 142
Query: 152 LSMRGACSGCPSASETLKYGV-ANILNHFVPEVKDIRTV 189
L G C+GC TLK G+ +L F EVK +R +
Sbjct: 143 LQFGGGCNGCSMIDVTLKNGIEKELLERFPEEVKGVRDI 181
>gi|323436167|ref|ZP_01051062.2| NifU-like protein [Dokdonia donghaensis MED134]
gi|321496482|gb|EAQ38213.2| NifU-like protein [Dokdonia donghaensis MED134]
Length = 88
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYG 171
S + + Q++++ L+ +RP + DGGDI G D +V + ++GAC GC TLK G
Sbjct: 10 STAELTQKVEDALEE-IRPFLQSDGGDISLLGIDDDRVVRVQLQGACVGCSVNQMTLKSG 68
Query: 172 VANILNHFVPEVKDIRTV 189
V + P+++ + V
Sbjct: 69 VEMTIKKHAPQIEQVINV 86
>gi|123468395|ref|XP_001317416.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
gi|121900149|gb|EAY05193.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
Length = 65
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 25/43 (58%)
Query: 136 DGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
DGGDIV K DGIV + + G CSGCPS TL G+ L
Sbjct: 2 DGGDIVLKDITDGIVSVQLMGHCSGCPSRRNTLNAGILGCLQE 44
>gi|238014236|gb|ACR38153.1| unknown [Zea mays]
Length = 226
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD VRP + DGG++ +V L ++GAC CP++ T+K G+ L
Sbjct: 78 ENVEMVLDE-VRPYLMADGGNVALHEIDGNVVRLKLQGACGSCPASVTTMKMGIERRLME 136
Query: 179 FVPEV 183
+PE+
Sbjct: 137 KIPEI 141
>gi|222824470|ref|YP_002576044.1| NifU-like protein [Campylobacter lari RM2100]
gi|222539691|gb|ACM64792.1| NifU-like protein [Campylobacter lari RM2100]
Length = 323
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 101 KLDDMGSGDFIESDSAVVQRIKEV---LDNRVRPAVARDGGDI----VFKGYRDGI-VFL 152
KL D D D +V+++K V LD+ VRP + DGGD+ + K I +++
Sbjct: 227 KLKDQSKTDIAFDDMTMVKQLKAVEAVLDSDVRPMLHGDGGDLEVIDIQKSENKNIDIYI 286
Query: 153 SMRGACSGCPSASETLKYGVANILNH 178
GACSGC S S Y + NIL
Sbjct: 287 RYLGACSGCSSGSGATLYAIENILQE 312
>gi|242067665|ref|XP_002449109.1| hypothetical protein SORBIDRAFT_05g005270 [Sorghum bicolor]
gi|241934952|gb|EES08097.1| hypothetical protein SORBIDRAFT_05g005270 [Sorghum bicolor]
Length = 225
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD VRP + DGG++ +V L ++GAC CP++ T+K G+ L
Sbjct: 77 ENVEMVLDE-VRPYLMADGGNVALHEIDGNMVRLKLQGACGSCPASVTTMKMGIERRLME 135
Query: 179 FVPEV 183
+PE+
Sbjct: 136 KIPEI 140
>gi|254514377|ref|ZP_05126438.1| IscR-regulated protein YhgI [gamma proteobacterium NOR5-3]
gi|219676620|gb|EED32985.1| IscR-regulated protein YhgI [gamma proteobacterium NOR5-3]
Length = 196
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ DS + RI +L N V P++A GG++ + + D L G C GC + TLK
Sbjct: 106 VSDDSPIEDRINYLLYNEVNPSLAAHGGEVSLVEVTEDAYAVLRFGGGCQGCSAVDMTLK 165
Query: 170 YGVANILNHFVPEVKDIR 187
GV L +P++K +R
Sbjct: 166 DGVEKTLLDQLPQLKGVR 183
>gi|239993300|ref|ZP_04713824.1| putative DNA uptake protein [Alteromonas macleodii ATCC 27126]
Length = 192
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 70/176 (39%), Gaps = 16/176 (9%)
Query: 25 EGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIME 83
E HF + S R+F + PG +S G + D + R P G
Sbjct: 7 EAQAHFVKLLSKQESGTNIRVFVVNPGTSSAECGVSYCP--PDAVEETDTRLPFNGFDAV 64
Query: 84 HFISGDPIIHNGGLGDMKLDDMGS----------GDFIESDSAVVQRIKEVLDNRVRPAV 133
P + + D D MGS + D+ +++RI ++++ + P +
Sbjct: 65 VDEESAPYLEEAEI-DYVTDQMGSQLTLKAPNAKARKVSDDAPLIERINYMIESEINPQL 123
Query: 134 ARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGV-ANILNHFVPEVKDIR 187
A GG++V DG L G C+GC TLK G+ ++ F E+K +R
Sbjct: 124 ASHGGNVVLTELTDDGYAILQFGGGCNGCSMVDVTLKEGIEKQMVEQFAGELKGVR 179
>gi|261344535|ref|ZP_05972179.1| IscR-regulated protein YhgI [Providencia rustigianii DSM 4541]
gi|282567449|gb|EFB72984.1| IscR-regulated protein YhgI [Providencia rustigianii DSM 4541]
Length = 192
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 16/172 (9%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
HFS E + R+F I PG + G + G + + L+ L ++ +
Sbjct: 11 HFSKLLEGQEPGTQIRVFVINPGTPTAECGVSYCPPGAVEATDKELKFEKLSAYVDEISA 70
Query: 88 GDPIIHNGGLGDMKLDDMGSGDFIES----------DSAVVQRIKEVLDNRVRPAVARDG 137
P + + + D D +GS +++ D+ +++R++ VL +++ P +A G
Sbjct: 71 --PFLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVSDDAPLIERVEYVLQSQINPQLAGHG 127
Query: 138 GDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGV-ANILNHFVPEVKDIR 187
G + + + DG L G C+GC TLK G+ +L F E+K ++
Sbjct: 128 GRVSLMEITEDGFAILQFGGGCNGCSMVDVTLKEGIEKELLKMFDGELKGVK 179
>gi|218667970|ref|YP_002425198.1| iron-sulfur cluster-binding protein, Rieske family
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|218520183|gb|ACK80769.1| iron-sulfur cluster-binding protein, Rieske family
[Acidithiobacillus ferrooxidans ATCC 23270]
Length = 296
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVAN 174
++ +RI+ LD+ VRP + GG++ R V L + G+C GCPS+S TL GV
Sbjct: 92 SLQERIEAALDS-VRPGLEGHGGNVELVELRLPDTVILRLLGSCHGCPSSSLTLSDGVEK 150
Query: 175 ILNHFVPEVKDIRTV 189
+ PE++ I T
Sbjct: 151 AIRDACPEIRHIETA 165
>gi|198282994|ref|YP_002219315.1| Rieske (2Fe-2S) domain-containing protein [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|198247515|gb|ACH83108.1| Rieske (2Fe-2S) domain protein [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 301
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVAN 174
++ +RI+ LD+ VRP + GG++ R V L + G+C GCPS+S TL GV
Sbjct: 97 SLQERIEAALDS-VRPGLEGHGGNVELVELRLPDTVILRLLGSCHGCPSSSLTLSDGVEK 155
Query: 175 ILNHFVPEVKDIRTV 189
+ PE++ I T
Sbjct: 156 AIRDACPEIRHIETA 170
>gi|33520016|ref|NP_878848.1| hypothetical protein Bfl573 [Candidatus Blochmannia floridanus]
gi|51701996|sp|Q7VRN1|NFUA_BLOFL RecName: Full=Fe/S biogenesis protein nfuA
gi|33504362|emb|CAD83255.1| Thioredoxin-like proteins and domains [Candidatus Blochmannia
floridanus]
Length = 205
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+IK +L +++ P +A GG + + K D I L G C+GC A T+K G+ L
Sbjct: 123 QIKHILTHQINPQLAMHGGSVSLVKITSDSIAILKFHGGCNGCAMAFYTIKEGIEKTLKK 182
Query: 179 FVPEV 183
PE+
Sbjct: 183 LCPEL 187
>gi|152972292|ref|YP_001337438.1| putative DNA uptake protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|206576923|ref|YP_002236213.1| IscR-regulated protein YhgI [Klebsiella pneumoniae 342]
gi|238896881|ref|YP_002921626.1| putative DNA uptake protein [Klebsiella pneumoniae NTUH-K2044]
gi|262045250|ref|ZP_06018276.1| Fe/S-biogenesis protein NfuA [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|288933201|ref|YP_003437260.1| IscR-regulated protein YhgI [Klebsiella variicola At-22]
gi|290512005|ref|ZP_06551373.1| IscR-regulated protein YhgI [Klebsiella sp. 1_1_55]
gi|330012478|ref|ZP_08307392.1| IscR-regulated protein YhgI [Klebsiella sp. MS 92-3]
gi|166990527|sp|A6TF37|NFUA_KLEP7 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767307|sp|B5XTS2|NFUA_KLEP3 RecName: Full=Fe/S biogenesis protein nfuA
gi|150957141|gb|ABR79171.1| membrane-bound protein in GNT I transport system [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206565981|gb|ACI07757.1| IscR-regulated protein YhgI [Klebsiella pneumoniae 342]
gi|238549208|dbj|BAH65559.1| membrane-bound protein in GNT I transport system [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|259037460|gb|EEW38705.1| Fe/S-biogenesis protein NfuA [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|288887930|gb|ADC56248.1| IscR-regulated protein YhgI [Klebsiella variicola At-22]
gi|289775795|gb|EFD83795.1| IscR-regulated protein YhgI [Klebsiella sp. 1_1_55]
gi|328533829|gb|EGF60508.1| IscR-regulated protein YhgI [Klebsiella sp. MS 92-3]
Length = 191
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + + + DG+ L G C+GC TLK
Sbjct: 101 VSDDAPLMERVEYLLQSQINPQLAGHGGRVSLMEITDDGLAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQLLNEF-PELKGVR 178
>gi|307545194|ref|YP_003897673.1| thioredoxin [Halomonas elongata DSM 2581]
gi|307217218|emb|CBV42488.1| K07400 thioredoxin-like protein [Halomonas elongata DSM 2581]
Length = 250
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ +DS + R+ VL + + P +A GG+I + + + + L+ G C GC + TLK
Sbjct: 159 VNADSPLEDRVNYVLYSEINPGLAAHGGEIKLVQLTEEQVAVLAFGGGCQGCAAVDLTLK 218
Query: 170 YGVANILNHFVPEVKDIRTV 189
GV L +PE+ IR V
Sbjct: 219 EGVERTLMERIPELSGIRDV 238
>gi|119357807|ref|YP_912451.1| NifU domain-containing protein [Chlorobium phaeobacteroides DSM
266]
gi|119355156|gb|ABL66027.1| nitrogen-fixing NifU domain protein [Chlorobium phaeobacteroides
DSM 266]
Length = 86
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETL 168
++ + A+ R+ L+ VRP + DGGD G +D +V + + GAC CP ++ TL
Sbjct: 7 YLPNSDALYDRVIAALET-VRPYLQVDGGDCQLVGISKDMVVDVKLLGACGSCPMSTLTL 65
Query: 169 KYGVANILNHFVPEVKDIRTV 189
+ GV + +PE+ + +V
Sbjct: 66 RAGVEQAIKKAIPEIARVESV 86
>gi|213961919|ref|ZP_03390184.1| conserved domain protein [Capnocytophaga sputigena Capno]
gi|213955272|gb|EEB66589.1| conserved domain protein [Capnocytophaga sputigena Capno]
Length = 77
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 127 NRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
+++RP + DGGDI DG IV + + G C+ C TL+ GV + +VP+++
Sbjct: 13 DKIRPYLQNDGGDITLVDIEDGKIVKVRLEGTCTNCSVNQLTLRSGVEMTIKEYVPQIEK 72
Query: 186 IRTV 189
+ +V
Sbjct: 73 VISV 76
>gi|212637526|ref|YP_002314051.1| putative DNA uptake protein [Shewanella piezotolerans WP3]
gi|254767327|sp|B8CUY8|NFUA_SHEPW RecName: Full=Fe/S biogenesis protein nfuA
gi|212559010|gb|ACJ31464.1| HesB/YadR/YfhF:Nitrogen-fixing NifU [Shewanella piezotolerans WP3]
Length = 192
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +V+RI+ V+ + + P +A GG+I+ + DGI L G C+GC TLK
Sbjct: 101 VSGDAPLVERIEYVIQSEINPQLASHGGNIMLVEITEDGIAVLQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L+ F E+ ++ V
Sbjct: 161 DGIEKQLLDMFPGELTGVKDV 181
>gi|119776634|ref|YP_929374.1| putative DNA uptake protein [Shewanella amazonensis SB2B]
gi|150383447|sp|A1SBE8|NFUA_SHEAM RecName: Full=Fe/S biogenesis protein nfuA
gi|119769134|gb|ABM01705.1| YhgI protein [Shewanella amazonensis SB2B]
Length = 192
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ +D+++V+RI+ V+ + P +A GG+I+ + DG+ + G C+GC TLK
Sbjct: 101 VSADASLVERIEYVIQAEINPQLASHGGNILLVEVTDDGVAVIQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L+ F E+ ++R
Sbjct: 161 DGIEKQLLDMFPGELTEVR 179
>gi|317485383|ref|ZP_07944262.1| NifU-like N terminal domain-containing protein [Bilophila
wadsworthia 3_1_6]
gi|316923342|gb|EFV44549.1| NifU-like N terminal domain-containing protein [Bilophila
wadsworthia 3_1_6]
Length = 282
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+Q++ +VL + VRP +A DGGDI V +++RG CS C S + TLK V IL
Sbjct: 209 MQKVMQVLQDEVRPRLAADGGDIELVDVDGHRVVVALRGLCSNCSSRTVTLKDLVEKIL 267
>gi|326487760|dbj|BAK05552.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
DS++ E++ ++VRP + DGG++ +V L ++GAC CP + T++ G+
Sbjct: 65 DSSLTAENVELVLDQVRPYLMADGGNVALHEIDGNVVRLKLQGACGACPGSVMTMRMGIQ 124
Query: 174 NILNHFVPEVKDIRTV 189
L +PE+ + +
Sbjct: 125 RRLMDEIPEIAAVEAI 140
>gi|168012112|ref|XP_001758746.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689883|gb|EDQ76252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 153
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
E++ + VRP + DGG++ +V L ++GAC CPS++ T++ G+ L +PE
Sbjct: 9 ELVLDEVRPYLISDGGNVALHEIDGLVVKLKLQGACGSCPSSTMTMRMGIERRLIERIPE 68
Query: 183 V 183
+
Sbjct: 69 I 69
>gi|256827894|ref|YP_003156622.1| nitrogen-fixing NifU domain-containing protein [Desulfomicrobium
baculatum DSM 4028]
gi|256577070|gb|ACU88206.1| nitrogen-fixing NifU domain protein [Desulfomicrobium baculatum DSM
4028]
Length = 73
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++++ LD VRP + DGG + + GIV + M GAC GCP A TLK + +
Sbjct: 3 EQVEKALDT-VRPILQADGGYVELVNILPSGIVQVRMSGACKGCPMAQMTLKSSIERAVK 61
Query: 178 HFVPEVKDIRTV 189
VP +K + V
Sbjct: 62 KMVPGIKAVEAV 73
>gi|154173987|ref|YP_001409127.1| NifU family protein [Campylobacter curvus 525.92]
gi|112802254|gb|EAT99598.1| NifU family protein [Campylobacter curvus 525.92]
Length = 89
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD +++ + L +V P + DGG + G ++G ++L + G C GC +++ TLKYG+
Sbjct: 5 SDEELLKPVTASL-QKVLPMLENDGGGMELLGIKNGKIYLRLTGHCHGCAASTTTLKYGI 63
Query: 173 ANIL 176
L
Sbjct: 64 ERQL 67
>gi|295697085|ref|YP_003590323.1| nitrogen-fixing NifU domain protein [Bacillus tusciae DSM 2912]
gi|295412687|gb|ADG07179.1| nitrogen-fixing NifU domain protein [Bacillus tusciae DSM 2912]
Length = 277
Score = 47.4 bits (111), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
R+ VL+ VRP + GGD+ +V++ + GACSGC ++ TL+ GV +
Sbjct: 89 RVAAVLEE-VRPYMRSHGGDVELVKVEADVVYVRLHGACSGCSLSALTLRDGVEEAVKAR 147
Query: 180 VPEVKDI 186
VPEV+ +
Sbjct: 148 VPEVRRV 154
>gi|194334614|ref|YP_002016474.1| nitrogen-fixing NifU domain-containing protein [Prosthecochloris
aestuarii DSM 271]
gi|194312432|gb|ACF46827.1| nitrogen-fixing NifU domain protein [Prosthecochloris aestuarii DSM
271]
Length = 86
Score = 47.4 bits (111), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSAS 165
S ++ + R+ L++ VRP + DGGD G +D +V + + GAC CP ++
Sbjct: 4 SKQYLPDTDPLYDRVINALED-VRPYLQADGGDCQLVGITKDMVVDVKLLGACGSCPMST 62
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TL+ GV + +PEV + +V
Sbjct: 63 LTLRAGVEQAVKKAIPEVARVESV 86
>gi|163753376|ref|ZP_02160500.1| nifU-like domain protein [Kordia algicida OT-1]
gi|161327108|gb|EDP98433.1| nifU-like domain protein [Kordia algicida OT-1]
Length = 79
Score = 47.4 bits (111), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+++ LD +RP + DGGDI G D +V + + GAC GC TLK GV +
Sbjct: 10 VQKALD-EIRPFLQSDGGDIKLVGIENDTLVKVQLEGACVGCSVNQMTLKSGVEMTIKKH 68
Query: 180 VPEVKDIRTV 189
VP+++ + +V
Sbjct: 69 VPQIEKVISV 78
>gi|193212089|ref|YP_001998042.1| nitrogen-fixing NifU domain-containing protein [Chlorobaculum
parvum NCIB 8327]
gi|193085566|gb|ACF10842.1| nitrogen-fixing NifU domain protein [Chlorobaculum parvum NCIB
8327]
Length = 83
Score = 47.4 bits (111), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASET 167
D++ + + R+ L+ VRP + DGGD G +D +V + + GAC CP ++ T
Sbjct: 3 DYLPNSDPLYDRVISALET-VRPYLQVDGGDCQLIGITKDMVVDVKLLGACGSCPMSTLT 61
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
L+ GV + +PE+ + V
Sbjct: 62 LRAGVEQAIKKAIPEIARVEQV 83
>gi|119486794|ref|ZP_01620769.1| Fe-S cluster assembly protein NifU [Lyngbya sp. PCC 8106]
gi|119456087|gb|EAW37220.1| Fe-S cluster assembly protein NifU [Lyngbya sp. PCC 8106]
Length = 300
Score = 47.4 bits (111), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I++VL +++P +A+DGG++ V + ++GACS C S++ETLK + L V
Sbjct: 232 IQQVLTEQIKPVLAKDGGNVELFDVEGDRVKVILQGACSSCASSTETLKIAIEGTLRATV 291
Query: 181 P 181
Sbjct: 292 S 292
>gi|294138942|ref|YP_003554920.1| yhgI protein [Shewanella violacea DSS12]
gi|293325411|dbj|BAJ00142.1| yhgI protein [Shewanella violacea DSS12]
Length = 192
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ SD+++ +RI+ V+ + + P +A GG+I+ + +G+ L G C+GC TLK
Sbjct: 101 VNSDASLNERIEYVIQSEINPQLASHGGNIMLMEVSEEGVAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L+ F E+ +R +
Sbjct: 161 NGIEKQLLDMFPGELTGVRDI 181
>gi|148244538|ref|YP_001219232.1| hypothetical protein COSY_0386 [Candidatus Vesicomyosocius okutanii
HA]
gi|254767332|sp|A5CX22|NFUA_VESOH RecName: Full=Fe/S biogenesis protein nfuA
gi|146326365|dbj|BAF61508.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii
HA]
Length = 192
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 106 GSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSA 164
G+ + D+ + ++IK V+ + P +A GG + G I V L+ G C GC S
Sbjct: 97 AKGEEPKEDAPLEEKIKYVIAADITPGLASHGGFVELVGITKQIDVILNFGGGCQGCSSV 156
Query: 165 SETLKYGVANILNHFVPEVKDIRTV 189
TL+ GV L PE+K +R V
Sbjct: 157 KSTLEQGVEAQLKARFPEIKSVRDV 181
>gi|261823348|ref|YP_003261454.1| DNA uptake protein [Pectobacterium wasabiae WPP163]
gi|261607361|gb|ACX89847.1| IscR-regulated protein YhgI [Pectobacterium wasabiae WPP163]
Length = 191
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
++ + +++R++ VL +++ P +A GG + D G+ L G C+GC TLK
Sbjct: 101 VDDSAPLMERVEYVLQSQINPQLAGHGGRVTLMEITDDGLAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLQTFPELKGVR 178
>gi|221135019|ref|ZP_03561322.1| putative DNA uptake protein [Glaciecola sp. HTCC2999]
Length = 192
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 16/157 (10%)
Query: 44 RIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKL 102
R+F + PG ++ G + T D + +R P G P + + D
Sbjct: 26 RVFVVNPGTSTAECGVSYCT--PDAVEATDIRLPFNGFDAVVDQESAPFLEEAEI-DFVT 82
Query: 103 DDMGS----------GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVF 151
D MGS I D+ ++ R++ ++ + P +A G + G D GI
Sbjct: 83 DQMGSQLTLKAPNAKARKIADDAPLIDRVEYLIQTEINPQLANHNGQVTLTGITDDGIAI 142
Query: 152 LSMRGACSGCPSASETLKYGV-ANILNHFVPEVKDIR 187
L G C+GC TLK G+ +L F E+ +R
Sbjct: 143 LQFGGGCNGCSMVDVTLKDGIEKQMLEQFAGELTGVR 179
>gi|113476874|ref|YP_722935.1| nitrogen-fixing NifU-like protein [Trichodesmium erythraeum IMS101]
gi|110167922|gb|ABG52462.1| nitrogen-fixing NifU-like [Trichodesmium erythraeum IMS101]
Length = 173
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNH 178
RI++ LD VRP + GD+ G + V + + G CS CP+++ T+K GV +
Sbjct: 98 RIQQALD-EVRPGLQSHNGDVELVGIKLPDTVEVKLVGNCSNCPASTLTMKDGVEQAIKT 156
Query: 179 FVPEVKDIRTV 189
PE+K++ +V
Sbjct: 157 HCPEIKNVVSV 167
>gi|308808272|ref|XP_003081446.1| NifU-like domain-containing proteins (ISS) [Ostreococcus tauri]
gi|116059909|emb|CAL55968.1| NifU-like domain-containing proteins (ISS) [Ostreococcus tauri]
Length = 203
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYGVANILNHF 179
I++VLD VRP + DGGD+ DG+ V L ++GAC CPS++ T++ G+ L
Sbjct: 57 IEKVLDE-VRPYLIADGGDVELVEI-DGLSVKLKLKGACGSCPSSTVTMRMGIEKRLLEK 114
Query: 180 VPEVKDI 186
+P++ ++
Sbjct: 115 IPDIMEV 121
>gi|322830955|ref|YP_004210982.1| IscR-regulated protein YhgI [Rahnella sp. Y9602]
gi|321166156|gb|ADW71855.1| IscR-regulated protein YhgI [Rahnella sp. Y9602]
Length = 191
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ L +++ P +A GG + + + DGI L G C+GC TLK
Sbjct: 101 VSDDAPLMERVEYQLQSQINPQLASHGGRVSLMEITDDGIAILQFGGGCNGCSMIDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 DGIEKELLQNFPELKGVR 178
>gi|224129660|ref|XP_002328771.1| predicted protein [Populus trichocarpa]
gi|222839069|gb|EEE77420.1| predicted protein [Populus trichocarpa]
Length = 234
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
++ VLD VRP + DGG++ +V L ++GACS C ++ T+K G+ L +
Sbjct: 89 VESVLDE-VRPYLISDGGNVALHEIDGNVVRLKLQGACSSCSASVTTMKMGIERRLMEKI 147
Query: 181 PEVKDIRTV 189
PE+ + +
Sbjct: 148 PEIVAVEAI 156
>gi|126172396|ref|YP_001048545.1| putative DNA uptake protein [Shewanella baltica OS155]
gi|153002690|ref|YP_001368371.1| putative DNA uptake protein [Shewanella baltica OS185]
gi|160877426|ref|YP_001556742.1| putative DNA uptake protein [Shewanella baltica OS195]
gi|217975268|ref|YP_002360019.1| putative DNA uptake protein [Shewanella baltica OS223]
gi|304412256|ref|ZP_07393864.1| IscR-regulated protein YhgI [Shewanella baltica OS183]
gi|307306040|ref|ZP_07585785.1| IscR-regulated protein YhgI [Shewanella baltica BA175]
gi|166990529|sp|A3CYW3|NFUA_SHEB5 RecName: Full=Fe/S biogenesis protein nfuA
gi|166990530|sp|A6WU19|NFUA_SHEB8 RecName: Full=Fe/S biogenesis protein nfuA
gi|189041728|sp|A9KUY3|NFUA_SHEB9 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767326|sp|B8ECN4|NFUA_SHEB2 RecName: Full=Fe/S biogenesis protein nfuA
gi|125995601|gb|ABN59676.1| HesB/YadR/YfhF-family protein [Shewanella baltica OS155]
gi|151367308|gb|ABS10308.1| HesB/YadR/YfhF-family protein [Shewanella baltica OS185]
gi|160862948|gb|ABX51482.1| IscR-regulated protein YhgI [Shewanella baltica OS195]
gi|217500403|gb|ACK48596.1| IscR-regulated protein YhgI [Shewanella baltica OS223]
gi|304349291|gb|EFM13701.1| IscR-regulated protein YhgI [Shewanella baltica OS183]
gi|306910913|gb|EFN41340.1| IscR-regulated protein YhgI [Shewanella baltica BA175]
gi|315269629|gb|ADT96482.1| IscR-regulated protein YhgI [Shewanella baltica OS678]
Length = 192
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +V+RI+ V+ + + P +A GG+I+ + ++G+ L G C+GC TLK
Sbjct: 101 VSGDAPLVERIEYVIQSEINPQLAGHGGNIMLVEITKEGVAVLQFGGGCNGCSQVDITLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L+ F E+ +R V
Sbjct: 161 DGIEKQLLDMFPGELTGVRDV 181
>gi|149911004|ref|ZP_01899633.1| Thioredoxin-like protein [Moritella sp. PE36]
gi|149805907|gb|EDM65893.1| Thioredoxin-like protein [Moritella sp. PE36]
Length = 192
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ + +R+ V+ V P +A GG++V D GI L G C+GC TLK
Sbjct: 101 VADDAPLTERVDYVIQTEVNPQLAGHGGNVVLTEITDDGIAILQFGGGCNGCSQVDFTLK 160
Query: 170 YGVANILNHFVPE 182
G+ L PE
Sbjct: 161 EGIEKQLLELFPE 173
>gi|303327402|ref|ZP_07357843.1| Fe-S cluster assembly protein NifU [Desulfovibrio sp. 3_1_syn3]
gi|302862342|gb|EFL85275.1| Fe-S cluster assembly protein NifU [Desulfovibrio sp. 3_1_syn3]
Length = 278
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 118 VQRIKEVL---DNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
VQR+++VL D +RP +A DGGDI V +S+RG CS C S+ T++ V
Sbjct: 204 VQRMQQVLKTIDEEIRPQLAADGGDIELVDVDGKRVTVSLRGRCSHCRSSEVTIRNLVER 263
Query: 175 IL-NHFVPEV 183
+L H P++
Sbjct: 264 LLREHVEPDI 273
>gi|255994079|ref|ZP_05427214.1| NifU-related protein [Eubacterium saphenum ATCC 49989]
gi|255993747|gb|EEU03836.1| NifU-related protein [Eubacterium saphenum ATCC 49989]
Length = 100
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+D +VQ +KE +V P +A G + +G+ + + GAC+ CPSA T++ V
Sbjct: 8 TDKKLVQTLKE----KVDPLLAEHLGGSELVDFENGVARVRLTGACATCPSAELTMESVV 63
Query: 173 ANILNHFVPEVKDI 186
I+ PEVKD+
Sbjct: 64 KEIVLENCPEVKDV 77
>gi|217979852|ref|YP_002363999.1| Rieske (2Fe-2S) domain protein [Methylocella silvestris BL2]
gi|217505228|gb|ACK52637.1| Rieske (2Fe-2S) domain protein [Methylocella silvestris BL2]
Length = 290
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+RI+ L+ VRP +A GGD+ R + + G+C GCP++S T GV +
Sbjct: 96 ERIESALEG-VRPMLAAHGGDVELVSVRPPAIEVRFVGSCDGCPASSMTFHAGVKKAVAE 154
Query: 179 FVPEVKDIRTV 189
PE+ DI V
Sbjct: 155 ACPEITDILQV 165
>gi|194430959|ref|ZP_03063252.1| protein GntY [Shigella dysenteriae 1012]
gi|194420414|gb|EDX36490.1| protein GntY [Shigella dysenteriae 1012]
gi|332085774|gb|EGI90938.1| nifU-like domain protein [Shigella dysenteriae 155-74]
Length = 191
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + + + DG L G C+GC TLK
Sbjct: 101 VADDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ ++LN F PE+K +R
Sbjct: 161 EGIEKHLLNEF-PELKGVR 178
>gi|309810977|ref|ZP_07704775.1| NifU-like protein [Dermacoccus sp. Ellin185]
gi|308434941|gb|EFP58775.1| NifU-like protein [Dermacoccus sp. Ellin185]
Length = 219
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 104 DMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPS 163
D G+ D D+ + ++ + V+ + GGDI G G+V +S+ GAC GCP+
Sbjct: 113 DEGAAD----DTEIAEQARVVVADVAEQVAHSHGGDITLLGVERGVVTVSLTGACDGCPA 168
Query: 164 ASETLKYGVANILNHFVPEVKDIRT 188
A+ TL + + L V V+++R
Sbjct: 169 AAMTLHRRIEDELRARVGGVREVRA 193
>gi|145351003|ref|XP_001419878.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580111|gb|ABO98171.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 213
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASE 166
G ++ I+ VLD VRP + DGGD+ DG+ V L ++GAC CPS++
Sbjct: 54 GSLTDTLELTADNIESVLDE-VRPYLIADGGDVELVEI-DGLSVKLKLKGACGSCPSSTV 111
Query: 167 TLKYGVANILNHFVPEVKDI 186
T++ G+ L +P++ ++
Sbjct: 112 TMRMGIEKRLLEKIPDIMEV 131
>gi|298706477|emb|CBJ29464.1| iron-sulfur cluster assembly protein, similar to nifU [Ectocarpus
siliculosus]
Length = 494
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVAN 174
++ + +VLD VRP + DGG++ G +V L+++GAC CPS++ T+K G+
Sbjct: 344 TLENVDKVLDE-VRPYLIADGGNVRVMGVDIDRRVVKLALQGACGSCPSSTTTMKMGIER 402
Query: 175 ILNH 178
+LN
Sbjct: 403 VLNE 406
>gi|226944949|ref|YP_002800022.1| NfuA protein [Azotobacter vinelandii DJ]
gi|259511740|sp|C1DLW0|NFUA_AZOVD RecName: Full=Fe/S biogenesis protein nfuA
gi|226719876|gb|ACO79047.1| NfuA protein [Azotobacter vinelandii DJ]
Length = 194
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETL 168
I+ DS + +RI L + P +A GG + + +GI L G C GC TL
Sbjct: 103 MIDEDSPLGERINYYLQTEINPGLASHGGQVSLVDIVEEGIAVLRFGGGCQGCGMVDMTL 162
Query: 169 KYGVANILNHFVPEVKDIR 187
K GV L +P++K +R
Sbjct: 163 KDGVEKTLLERIPDLKGVR 181
>gi|114049364|ref|YP_739914.1| putative DNA uptake protein [Shewanella sp. MR-7]
gi|119370616|sp|Q0HPU8|NFUA_SHESR RecName: Full=Fe/S biogenesis protein nfuA
gi|113890806|gb|ABI44857.1| HesB/YadR/YfhF-family protein [Shewanella sp. MR-7]
Length = 192
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ SD+ + +R++ V+ + + P +A GG+I+ + ++G+ L G C+GC TLK
Sbjct: 101 VSSDAPLAERVEYVIQSEINPQLASHGGNIMLVEITQEGVAVLQFGGGCNGCSQVDITLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L+ F E+ +R V
Sbjct: 161 DGIEKQLLDMFPGELTGVRDV 181
>gi|15803918|ref|NP_289954.1| putative DNA uptake protein [Escherichia coli O157:H7 EDL933]
gi|15833510|ref|NP_312283.1| DNA uptake protein [Escherichia coli O157:H7 str. Sakai]
gi|16131290|ref|NP_417873.1| Fe/S biogenesis protein; possible scaffold/chaperone for damaged
Fe/S proteins [Escherichia coli str. K-12 substr.
MG1655]
gi|24114681|ref|NP_709191.1| putative DNA uptake protein [Shigella flexneri 2a str. 301]
gi|26250015|ref|NP_756055.1| putative DNA uptake protein [Escherichia coli CFT073]
gi|30065301|ref|NP_839472.1| putative DNA uptake protein [Shigella flexneri 2a str. 2457T]
gi|74313917|ref|YP_312336.1| putative DNA uptake protein [Shigella sonnei Ss046]
gi|82545771|ref|YP_409718.1| DNA uptake protein [Shigella boydii Sb227]
gi|82778770|ref|YP_405119.1| putative DNA uptake protein [Shigella dysenteriae Sd197]
gi|89110596|ref|AP_004376.1| predicted gluconate transport associated protein [Escherichia coli
str. K-12 substr. W3110]
gi|91212889|ref|YP_542875.1| putative DNA uptake protein [Escherichia coli UTI89]
gi|110643647|ref|YP_671377.1| putative DNA uptake protein [Escherichia coli 536]
gi|110807249|ref|YP_690769.1| putative DNA uptake protein [Shigella flexneri 5 str. 8401]
gi|117625679|ref|YP_859002.1| putative DNA uptake protein [Escherichia coli APEC O1]
gi|157155730|ref|YP_001464872.1| putative DNA uptake protein [Escherichia coli E24377A]
gi|157162891|ref|YP_001460209.1| putative DNA uptake protein [Escherichia coli HS]
gi|168747108|ref|ZP_02772130.1| protein GntY [Escherichia coli O157:H7 str. EC4113]
gi|168753167|ref|ZP_02778174.1| protein GntY [Escherichia coli O157:H7 str. EC4401]
gi|168759439|ref|ZP_02784446.1| protein GntY [Escherichia coli O157:H7 str. EC4501]
gi|168765762|ref|ZP_02790769.1| protein GntY [Escherichia coli O157:H7 str. EC4486]
gi|168772693|ref|ZP_02797700.1| protein GntY [Escherichia coli O157:H7 str. EC4196]
gi|168779498|ref|ZP_02804505.1| protein GntY [Escherichia coli O157:H7 str. EC4076]
gi|168785219|ref|ZP_02810226.1| protein GntY [Escherichia coli O157:H7 str. EC869]
gi|168797185|ref|ZP_02822192.1| protein GntY [Escherichia coli O157:H7 str. EC508]
gi|170018350|ref|YP_001723304.1| putative DNA uptake protein [Escherichia coli ATCC 8739]
gi|170082930|ref|YP_001732250.1| gluconate transport associated protein [Escherichia coli str. K-12
substr. DH10B]
gi|170681204|ref|YP_001745662.1| putative DNA uptake protein [Escherichia coli SMS-3-5]
gi|170766983|ref|ZP_02901436.1| protein GntY [Escherichia albertii TW07627]
gi|187731025|ref|YP_001882093.1| putative DNA uptake protein [Shigella boydii CDC 3083-94]
gi|188492005|ref|ZP_02999275.1| protein GntY [Escherichia coli 53638]
gi|191167295|ref|ZP_03029112.1| protein GntY [Escherichia coli B7A]
gi|191167903|ref|ZP_03029707.1| protein GntY [Escherichia coli B7A]
gi|191171521|ref|ZP_03033069.1| protein GntY [Escherichia coli F11]
gi|193061845|ref|ZP_03042942.1| protein GntY [Escherichia coli E22]
gi|193068805|ref|ZP_03049765.1| protein GntY [Escherichia coli E110019]
gi|194426967|ref|ZP_03059519.1| protein GntY [Escherichia coli B171]
gi|194435891|ref|ZP_03067994.1| protein GntY [Escherichia coli 101-1]
gi|195934903|ref|ZP_03080285.1| putative DNA uptake protein [Escherichia coli O157:H7 str. EC4024]
gi|208809095|ref|ZP_03251432.1| protein GntY [Escherichia coli O157:H7 str. EC4206]
gi|208811856|ref|ZP_03253185.1| protein GntY [Escherichia coli O157:H7 str. EC4045]
gi|208821055|ref|ZP_03261375.1| protein GntY [Escherichia coli O157:H7 str. EC4042]
gi|209396437|ref|YP_002272850.1| protein GntY [Escherichia coli O157:H7 str. EC4115]
gi|209920872|ref|YP_002294956.1| putative DNA uptake protein [Escherichia coli SE11]
gi|215488695|ref|YP_002331126.1| putative DNA uptake protein [Escherichia coli O127:H6 str.
E2348/69]
gi|217325780|ref|ZP_03441864.1| protein GntY [Escherichia coli O157:H7 str. TW14588]
gi|218550672|ref|YP_002384463.1| DNA uptake protein [Escherichia fergusonii ATCC 35469]
gi|218555963|ref|YP_002388876.1| putative DNA uptake protein [Escherichia coli IAI1]
gi|218560472|ref|YP_002393385.1| DNA uptake protein [Escherichia coli S88]
gi|218691690|ref|YP_002399902.1| putative DNA uptake protein [Escherichia coli ED1a]
gi|218697097|ref|YP_002404764.1| putative DNA uptake protein [Escherichia coli 55989]
gi|218707005|ref|YP_002414524.1| putative DNA uptake protein [Escherichia coli UMN026]
gi|227883548|ref|ZP_04001353.1| HesB family protein [Escherichia coli 83972]
gi|237703145|ref|ZP_04533626.1| Fe/S biogenesis protein nfuA [Escherichia sp. 3_2_53FAA]
gi|238902505|ref|YP_002928301.1| putative gluconate transport associated protein [Escherichia coli
BW2952]
gi|253771757|ref|YP_003034588.1| DNA uptake protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254038582|ref|ZP_04872638.1| GntY [Escherichia sp. 1_1_43]
gi|254163342|ref|YP_003046450.1| putative DNA uptake protein [Escherichia coli B str. REL606]
gi|254795329|ref|YP_003080166.1| putative DNA uptake protein [Escherichia coli O157:H7 str. TW14359]
gi|256020759|ref|ZP_05434624.1| putative DNA uptake protein [Shigella sp. D9]
gi|256025858|ref|ZP_05439723.1| putative DNA uptake protein [Escherichia sp. 4_1_40B]
gi|260846198|ref|YP_003223976.1| putative gluconate transport associated protein [Escherichia coli
O103:H2 str. 12009]
gi|260857521|ref|YP_003231412.1| putative gluconate transport associated protein [Escherichia coli
O26:H11 str. 11368]
gi|260870140|ref|YP_003236542.1| putative gluconate transport associated protein [Escherichia coli
O111:H- str. 11128]
gi|261224695|ref|ZP_05938976.1| predicted gluconate transport associated protein [Escherichia coli
O157:H7 str. FRIK2000]
gi|261254410|ref|ZP_05946943.1| putative gluconate transport associated protein [Escherichia coli
O157:H7 str. FRIK966]
gi|291284750|ref|YP_003501568.1| Fe/S biogenesis protein nfuA [Escherichia coli O55:H7 str. CB9615]
gi|293406992|ref|ZP_06650916.1| DNA uptake protein [Escherichia coli FVEC1412]
gi|293412832|ref|ZP_06655500.1| IscR-regulated protein YhgI [Escherichia coli B354]
gi|293416816|ref|ZP_06659453.1| IscR-regulated protein YhgI [Escherichia coli B185]
gi|293453720|ref|ZP_06664139.1| IscR-regulated protein YhgI [Escherichia coli B088]
gi|298382734|ref|ZP_06992329.1| DNA uptake protein [Escherichia coli FVEC1302]
gi|300815387|ref|ZP_07095612.1| IscR-regulated protein YhgI [Escherichia coli MS 107-1]
gi|300822787|ref|ZP_07102924.1| IscR-regulated protein YhgI [Escherichia coli MS 119-7]
gi|300898897|ref|ZP_07117198.1| IscR-regulated protein YhgI [Escherichia coli MS 198-1]
gi|300907442|ref|ZP_07125089.1| IscR-regulated protein YhgI [Escherichia coli MS 84-1]
gi|300919299|ref|ZP_07135813.1| IscR-regulated protein YhgI [Escherichia coli MS 115-1]
gi|300926895|ref|ZP_07142661.1| IscR-regulated protein YhgI [Escherichia coli MS 182-1]
gi|300931053|ref|ZP_07146409.1| IscR-regulated protein YhgI [Escherichia coli MS 187-1]
gi|300937287|ref|ZP_07152130.1| IscR-regulated protein YhgI [Escherichia coli MS 21-1]
gi|300946843|ref|ZP_07161084.1| IscR-regulated protein YhgI [Escherichia coli MS 116-1]
gi|300956744|ref|ZP_07169013.1| IscR-regulated protein YhgI [Escherichia coli MS 175-1]
gi|300985358|ref|ZP_07177414.1| IscR-regulated protein YhgI [Escherichia coli MS 45-1]
gi|300987300|ref|ZP_07178108.1| IscR-regulated protein YhgI [Escherichia coli MS 200-1]
gi|301019565|ref|ZP_07183727.1| IscR-regulated protein YhgI [Escherichia coli MS 69-1]
gi|301023028|ref|ZP_07186838.1| IscR-regulated protein YhgI [Escherichia coli MS 196-1]
gi|301050374|ref|ZP_07197263.1| IscR-regulated protein YhgI [Escherichia coli MS 185-1]
gi|301302293|ref|ZP_07208425.1| IscR-regulated protein YhgI [Escherichia coli MS 124-1]
gi|301329725|ref|ZP_07222468.1| IscR-regulated protein YhgI [Escherichia coli MS 78-1]
gi|301645854|ref|ZP_07245768.1| IscR-regulated protein YhgI [Escherichia coli MS 146-1]
gi|306816248|ref|ZP_07450386.1| putative DNA uptake protein [Escherichia coli NC101]
gi|307140100|ref|ZP_07499456.1| putative DNA uptake protein [Escherichia coli H736]
gi|307311921|ref|ZP_07591559.1| IscR-regulated protein YhgI [Escherichia coli W]
gi|309785841|ref|ZP_07680472.1| nifU-like domain protein [Shigella dysenteriae 1617]
gi|309794685|ref|ZP_07689107.1| IscR-regulated protein YhgI [Escherichia coli MS 145-7]
gi|312968274|ref|ZP_07782484.1| nifU-like domain protein [Escherichia coli 2362-75]
gi|312972322|ref|ZP_07786496.1| nifU-like domain protein [Escherichia coli 1827-70]
gi|331644114|ref|ZP_08345243.1| IscR-regulated protein YhgI [Escherichia coli H736]
gi|331654992|ref|ZP_08355991.1| IscR-regulated protein YhgI [Escherichia coli M718]
gi|331659703|ref|ZP_08360641.1| IscR-regulated protein YhgI [Escherichia coli TA206]
gi|331665020|ref|ZP_08365921.1| IscR-regulated protein YhgI [Escherichia coli TA143]
gi|331670236|ref|ZP_08371075.1| IscR-regulated protein YhgI [Escherichia coli TA271]
gi|331674902|ref|ZP_08375659.1| IscR-regulated protein YhgI [Escherichia coli TA280]
gi|331679478|ref|ZP_08380148.1| IscR-regulated protein YhgI [Escherichia coli H591]
gi|331685056|ref|ZP_08385642.1| IscR-regulated protein YhgI [Escherichia coli H299]
gi|332281961|ref|ZP_08394374.1| Fe/S biogenesis protein nfuA [Shigella sp. D9]
gi|51702267|sp|P63020|NFUA_ECOLI RecName: Full=Fe/S biogenesis protein nfuA
gi|51702268|sp|P63021|NFUA_ECOL6 RecName: Full=Fe/S biogenesis protein nfuA
gi|51702269|sp|P63022|NFUA_ECO57 RecName: Full=Fe/S biogenesis protein nfuA
gi|51702270|sp|P63023|NFUA_SHIFL RecName: Full=Fe/S biogenesis protein nfuA
gi|119370608|sp|Q0TC53|NFUA_ECOL5 RecName: Full=Fe/S biogenesis protein nfuA
gi|119370609|sp|Q1R5M0|NFUA_ECOUT RecName: Full=Fe/S biogenesis protein nfuA
gi|119370617|sp|Q31VL8|NFUA_SHIBS RecName: Full=Fe/S biogenesis protein nfuA
gi|119370618|sp|Q32AM7|NFUA_SHIDS RecName: Full=Fe/S biogenesis protein nfuA
gi|119370619|sp|Q3YWL1|NFUA_SHISS RecName: Full=Fe/S biogenesis protein nfuA
gi|122957141|sp|Q0SZQ1|NFUA_SHIF8 RecName: Full=Fe/S biogenesis protein nfuA
gi|150383445|sp|A1AGT8|NFUA_ECOK1 RecName: Full=Fe/S biogenesis protein nfuA
gi|166990521|sp|A7ZSU3|NFUA_ECO24 RecName: Full=Fe/S biogenesis protein nfuA
gi|166990522|sp|A8A5M2|NFUA_ECOHS RecName: Full=Fe/S biogenesis protein nfuA
gi|189041724|sp|B1IP51|NFUA_ECOLC RecName: Full=Fe/S biogenesis protein nfuA
gi|254767294|sp|B7UKB9|NFUA_ECO27 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767295|sp|B7MDP0|NFUA_ECO45 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767296|sp|B7L4U4|NFUA_ECO55 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767297|sp|B5YTW5|NFUA_ECO5E RecName: Full=Fe/S biogenesis protein nfuA
gi|254767299|sp|B7N147|NFUA_ECO81 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767300|sp|B7M1X0|NFUA_ECO8A RecName: Full=Fe/S biogenesis protein nfuA
gi|254767301|sp|B1X760|NFUA_ECODH RecName: Full=Fe/S biogenesis protein nfuA
gi|254767302|sp|B7NE19|NFUA_ECOLU RecName: Full=Fe/S biogenesis protein nfuA
gi|254767303|sp|B6I2X8|NFUA_ECOSE RecName: Full=Fe/S biogenesis protein nfuA
gi|254767304|sp|B1LHL4|NFUA_ECOSM RecName: Full=Fe/S biogenesis protein nfuA
gi|254767306|sp|B7LSB7|NFUA_ESCF3 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767329|sp|B2U3M4|NFUA_SHIB3 RecName: Full=Fe/S biogenesis protein nfuA
gi|259511741|sp|C4ZVW3|NFUA_ECOBW RecName: Full=Fe/S biogenesis protein nfuA
gi|12518044|gb|AAG58515.1|AE005563_9 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|26110444|gb|AAN82629.1|AE016768_47 Protein yhgI [Escherichia coli CFT073]
gi|606349|gb|AAA58212.1| ORF_o191 [Escherichia coli str. K-12 substr. MG1655]
gi|1789819|gb|AAC76439.1| Fe/S biogenesis protein; possible scaffold/chaperone for damaged
Fe/S proteins [Escherichia coli str. K-12 substr.
MG1655]
gi|13363730|dbj|BAB37679.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|24053889|gb|AAN44898.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30043563|gb|AAP19283.1| hypothetical protein S4328 [Shigella flexneri 2a str. 2457T]
gi|73857394|gb|AAZ90101.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81242918|gb|ABB63628.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|81247182|gb|ABB67890.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|85676627|dbj|BAE77877.1| predicted gluconate transport associated protein [Escherichia coli
str. K12 substr. W3110]
gi|91074463|gb|ABE09344.1| hypothetical protein UTI89_C3915 [Escherichia coli UTI89]
gi|110345239|gb|ABG71476.1| hypothetical protein YhgI (HesB-like domain) [Escherichia coli 536]
gi|110616797|gb|ABF05464.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|115514803|gb|ABJ02878.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|157068571|gb|ABV07826.1| protein GntY [Escherichia coli HS]
gi|157077760|gb|ABV17468.1| protein GntY [Escherichia coli E24377A]
gi|169753278|gb|ACA75977.1| IscR-regulated protein YhgI [Escherichia coli ATCC 8739]
gi|169890765|gb|ACB04472.1| predicted gluconate transport associated protein [Escherichia coli
str. K-12 substr. DH10B]
gi|170124421|gb|EDS93352.1| protein GntY [Escherichia albertii TW07627]
gi|170518922|gb|ACB17100.1| protein GntY [Escherichia coli SMS-3-5]
gi|187428017|gb|ACD07291.1| protein GntY [Shigella boydii CDC 3083-94]
gi|187771744|gb|EDU35588.1| protein GntY [Escherichia coli O157:H7 str. EC4196]
gi|188018489|gb|EDU56611.1| protein GntY [Escherichia coli O157:H7 str. EC4113]
gi|188487204|gb|EDU62307.1| protein GntY [Escherichia coli 53638]
gi|189002308|gb|EDU71294.1| protein GntY [Escherichia coli O157:H7 str. EC4076]
gi|189359050|gb|EDU77469.1| protein GntY [Escherichia coli O157:H7 str. EC4401]
gi|189364704|gb|EDU83123.1| protein GntY [Escherichia coli O157:H7 str. EC4486]
gi|189369561|gb|EDU87977.1| protein GntY [Escherichia coli O157:H7 str. EC4501]
gi|189374586|gb|EDU93002.1| protein GntY [Escherichia coli O157:H7 str. EC869]
gi|189380102|gb|EDU98518.1| protein GntY [Escherichia coli O157:H7 str. EC508]
gi|190902076|gb|EDV61821.1| protein GntY [Escherichia coli B7A]
gi|190902647|gb|EDV62379.1| protein GntY [Escherichia coli B7A]
gi|190908148|gb|EDV67739.1| protein GntY [Escherichia coli F11]
gi|192932635|gb|EDV85232.1| protein GntY [Escherichia coli E22]
gi|192957881|gb|EDV88324.1| protein GntY [Escherichia coli E110019]
gi|194414928|gb|EDX31198.1| protein GntY [Escherichia coli B171]
gi|194425434|gb|EDX41418.1| protein GntY [Escherichia coli 101-1]
gi|208728896|gb|EDZ78497.1| protein GntY [Escherichia coli O157:H7 str. EC4206]
gi|208733133|gb|EDZ81820.1| protein GntY [Escherichia coli O157:H7 str. EC4045]
gi|208741178|gb|EDZ88860.1| protein GntY [Escherichia coli O157:H7 str. EC4042]
gi|209157837|gb|ACI35270.1| protein GntY [Escherichia coli O157:H7 str. EC4115]
gi|209756428|gb|ACI76526.1| hypothetical protein ECs4256 [Escherichia coli]
gi|209756430|gb|ACI76527.1| hypothetical protein ECs4256 [Escherichia coli]
gi|209756432|gb|ACI76528.1| hypothetical protein ECs4256 [Escherichia coli]
gi|209756434|gb|ACI76529.1| hypothetical protein ECs4256 [Escherichia coli]
gi|209756436|gb|ACI76530.1| hypothetical protein ECs4256 [Escherichia coli]
gi|209914131|dbj|BAG79205.1| conserved hypothetical protein [Escherichia coli SE11]
gi|215266767|emb|CAS11207.1| predicted gluconate transport associated protein [Escherichia coli
O127:H6 str. E2348/69]
gi|217322001|gb|EEC30425.1| protein GntY [Escherichia coli O157:H7 str. TW14588]
gi|218353829|emb|CAV00186.1| putative gluconate transport associated protein [Escherichia coli
55989]
gi|218358213|emb|CAQ90860.1| putative gluconate transport associated protein [Escherichia
fergusonii ATCC 35469]
gi|218362731|emb|CAR00357.1| putative gluconate transport associated protein [Escherichia coli
IAI1]
gi|218367241|emb|CAR05015.1| putative gluconate transport associated protein [Escherichia coli
S88]
gi|218429254|emb|CAR10065.1| putative gluconate transport associated protein [Escherichia coli
ED1a]
gi|218434102|emb|CAR15019.1| putative gluconate transport associated protein [Escherichia coli
UMN026]
gi|226839088|gb|EEH71111.1| GntY [Escherichia sp. 1_1_43]
gi|226902409|gb|EEH88668.1| Fe/S biogenesis protein nfuA [Escherichia sp. 3_2_53FAA]
gi|227839427|gb|EEJ49893.1| HesB family protein [Escherichia coli 83972]
gi|238862428|gb|ACR64426.1| predicted gluconate transport associated protein [Escherichia coli
BW2952]
gi|242378937|emb|CAQ33735.1| iron-sulfur cluster scaffold protein [Escherichia coli BL21(DE3)]
gi|253322801|gb|ACT27403.1| IscR-regulated protein YhgI [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253975243|gb|ACT40914.1| predicted gluconate transport associated protein [Escherichia coli
B str. REL606]
gi|253979399|gb|ACT45069.1| predicted gluconate transport associated protein [Escherichia coli
BL21(DE3)]
gi|254594729|gb|ACT74090.1| predicted gluconate transport associated protein [Escherichia coli
O157:H7 str. TW14359]
gi|257756170|dbj|BAI27672.1| predicted gluconate transport associated protein [Escherichia coli
O26:H11 str. 11368]
gi|257761345|dbj|BAI32842.1| predicted gluconate transport associated protein [Escherichia coli
O103:H2 str. 12009]
gi|257766496|dbj|BAI37991.1| predicted gluconate transport associated protein [Escherichia coli
O111:H- str. 11128]
gi|260447567|gb|ACX37989.1| IscR-regulated protein YhgI [Escherichia coli DH1]
gi|281180446|dbj|BAI56776.1| conserved hypothetical protein [Escherichia coli SE15]
gi|281602769|gb|ADA75753.1| predicted gluconate transport-associated protein [Shigella flexneri
2002017]
gi|284822069|gb|ADB98039.1| conserved hypothetical protein [Escherichia coli]
gi|284923406|emb|CBG36500.1| putative competence protein [Escherichia coli 042]
gi|290764623|gb|ADD58584.1| Fe/S biogenesis protein nfuA [Escherichia coli O55:H7 str. CB9615]
gi|291321846|gb|EFE61277.1| IscR-regulated protein YhgI [Escherichia coli B088]
gi|291425803|gb|EFE98837.1| DNA uptake protein [Escherichia coli FVEC1412]
gi|291431392|gb|EFF04377.1| IscR-regulated protein YhgI [Escherichia coli B185]
gi|291468479|gb|EFF10972.1| IscR-regulated protein YhgI [Escherichia coli B354]
gi|294494004|gb|ADE92760.1| protein GntY [Escherichia coli IHE3034]
gi|298276570|gb|EFI18088.1| DNA uptake protein [Escherichia coli FVEC1302]
gi|299880991|gb|EFI89202.1| IscR-regulated protein YhgI [Escherichia coli MS 196-1]
gi|300298003|gb|EFJ54388.1| IscR-regulated protein YhgI [Escherichia coli MS 185-1]
gi|300306168|gb|EFJ60688.1| IscR-regulated protein YhgI [Escherichia coli MS 200-1]
gi|300316464|gb|EFJ66248.1| IscR-regulated protein YhgI [Escherichia coli MS 175-1]
gi|300357459|gb|EFJ73329.1| IscR-regulated protein YhgI [Escherichia coli MS 198-1]
gi|300399190|gb|EFJ82728.1| IscR-regulated protein YhgI [Escherichia coli MS 69-1]
gi|300400857|gb|EFJ84395.1| IscR-regulated protein YhgI [Escherichia coli MS 84-1]
gi|300408099|gb|EFJ91637.1| IscR-regulated protein YhgI [Escherichia coli MS 45-1]
gi|300413614|gb|EFJ96924.1| IscR-regulated protein YhgI [Escherichia coli MS 115-1]
gi|300417099|gb|EFK00410.1| IscR-regulated protein YhgI [Escherichia coli MS 182-1]
gi|300453498|gb|EFK17118.1| IscR-regulated protein YhgI [Escherichia coli MS 116-1]
gi|300457646|gb|EFK21139.1| IscR-regulated protein YhgI [Escherichia coli MS 21-1]
gi|300461108|gb|EFK24601.1| IscR-regulated protein YhgI [Escherichia coli MS 187-1]
gi|300524787|gb|EFK45856.1| IscR-regulated protein YhgI [Escherichia coli MS 119-7]
gi|300532279|gb|EFK53341.1| IscR-regulated protein YhgI [Escherichia coli MS 107-1]
gi|300842456|gb|EFK70216.1| IscR-regulated protein YhgI [Escherichia coli MS 124-1]
gi|300844197|gb|EFK71957.1| IscR-regulated protein YhgI [Escherichia coli MS 78-1]
gi|301075843|gb|EFK90649.1| IscR-regulated protein YhgI [Escherichia coli MS 146-1]
gi|305850644|gb|EFM51101.1| putative DNA uptake protein [Escherichia coli NC101]
gi|306908065|gb|EFN38565.1| IscR-regulated protein YhgI [Escherichia coli W]
gi|307555500|gb|ADN48275.1| putative thioredoxin-like protein [Escherichia coli ABU 83972]
gi|307628476|gb|ADN72780.1| putative DNA uptake protein [Escherichia coli UM146]
gi|308121735|gb|EFO58997.1| IscR-regulated protein YhgI [Escherichia coli MS 145-7]
gi|308926961|gb|EFP72437.1| nifU-like domain protein [Shigella dysenteriae 1617]
gi|309703824|emb|CBJ03165.1| putative competence protein [Escherichia coli ETEC H10407]
gi|310334699|gb|EFQ00904.1| nifU-like domain protein [Escherichia coli 1827-70]
gi|312287099|gb|EFR15009.1| nifU-like domain protein [Escherichia coli 2362-75]
gi|312947962|gb|ADR28789.1| putative DNA uptake protein [Escherichia coli O83:H1 str. NRG 857C]
gi|313647284|gb|EFS11736.1| nifU-like domain protein [Shigella flexneri 2a str. 2457T]
gi|315062692|gb|ADT77019.1| predicted gluconate transport associated protein [Escherichia coli
W]
gi|315137990|dbj|BAJ45149.1| Fe/S biogenesis protein nfuA [Escherichia coli DH1]
gi|315256005|gb|EFU35973.1| IscR-regulated protein YhgI [Escherichia coli MS 85-1]
gi|315286086|gb|EFU45524.1| IscR-regulated protein YhgI [Escherichia coli MS 110-3]
gi|315291745|gb|EFU51101.1| IscR-regulated protein YhgI [Escherichia coli MS 153-1]
gi|315295925|gb|EFU55234.1| IscR-regulated protein YhgI [Escherichia coli MS 16-3]
gi|315614682|gb|EFU95322.1| nifU-like domain protein [Escherichia coli 3431]
gi|320175494|gb|EFW50592.1| NfuA Fe-S protein maturation [Shigella dysenteriae CDC 74-1112]
gi|320185943|gb|EFW60692.1| NfuA Fe-S protein maturation [Shigella flexneri CDC 796-83]
gi|320197373|gb|EFW71988.1| NfuA Fe-S protein maturation [Escherichia coli WV_060327]
gi|320199587|gb|EFW74177.1| NfuA Fe-S protein maturation [Escherichia coli EC4100B]
gi|320639696|gb|EFX09290.1| Fe/S biogenesis protein NfuA [Escherichia coli O157:H7 str. G5101]
gi|320645194|gb|EFX14210.1| Fe/S biogenesis protein NfuA [Escherichia coli O157:H- str. 493-89]
gi|320650505|gb|EFX18971.1| Fe/S biogenesis protein NfuA [Escherichia coli O157:H- str. H 2687]
gi|320655697|gb|EFX23620.1| Fe/S biogenesis protein NfuA [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320661481|gb|EFX28896.1| Fe/S biogenesis protein NfuA [Escherichia coli O55:H7 str. USDA
5905]
gi|320666504|gb|EFX33487.1| Fe/S biogenesis protein NfuA [Escherichia coli O157:H7 str. LSU-61]
gi|323154249|gb|EFZ40452.1| nifU-like domain protein [Escherichia coli EPECa14]
gi|323162799|gb|EFZ48636.1| nifU-like domain protein [Escherichia coli E128010]
gi|323164978|gb|EFZ50769.1| nifU-like domain protein [Shigella sonnei 53G]
gi|323174049|gb|EFZ59677.1| nifU-like domain protein [Escherichia coli LT-68]
gi|323179060|gb|EFZ64634.1| nifU-like domain protein [Escherichia coli 1180]
gi|323182875|gb|EFZ68276.1| nifU-like domain protein [Escherichia coli 1357]
gi|323188996|gb|EFZ74280.1| nifU-like domain protein [Escherichia coli RN587/1]
gi|323376720|gb|ADX48988.1| IscR-regulated protein YhgI [Escherichia coli KO11]
gi|323934596|gb|EGB30996.1| IscR-regulated protein YhgI [Escherichia coli E1520]
gi|323939366|gb|EGB35577.1| IscR-regulated protein YhgI [Escherichia coli E482]
gi|323944364|gb|EGB40439.1| IscR-regulated protein YhgI [Escherichia coli H120]
gi|323950071|gb|EGB45954.1| IscR-regulated protein YhgI [Escherichia coli H252]
gi|323954649|gb|EGB50431.1| IscR-regulated protein YhgI [Escherichia coli H263]
gi|323959586|gb|EGB55238.1| IscR-regulated protein YhgI [Escherichia coli H489]
gi|323966227|gb|EGB61663.1| IscR-regulated protein YhgI [Escherichia coli M863]
gi|323970012|gb|EGB65287.1| IscR-regulated protein YhgI [Escherichia coli TA007]
gi|323974782|gb|EGB69894.1| IscR-regulated protein YhgI [Escherichia coli TW10509]
gi|324009392|gb|EGB78611.1| IscR-regulated protein YhgI [Escherichia coli MS 57-2]
gi|324014596|gb|EGB83815.1| IscR-regulated protein YhgI [Escherichia coli MS 60-1]
gi|324018651|gb|EGB87870.1| IscR-regulated protein YhgI [Escherichia coli MS 117-3]
gi|324111727|gb|EGC05707.1| IscR-regulated protein YhgI [Escherichia fergusonii B253]
gi|324116389|gb|EGC10308.1| IscR-regulated protein YhgI [Escherichia coli E1167]
gi|325498956|gb|EGC96815.1| putative DNA uptake protein [Escherichia fergusonii ECD227]
gi|326337622|gb|EGD61457.1| NfuA Fe-S protein maturation [Escherichia coli O157:H7 str. 1044]
gi|326344627|gb|EGD68376.1| NfuA Fe-S protein maturation [Escherichia coli O157:H7 str. 1125]
gi|327251050|gb|EGE62743.1| nifU-like domain protein [Escherichia coli STEC_7v]
gi|330909447|gb|EGH37961.1| NfuA Fe-S protein maturation [Escherichia coli AA86]
gi|331036408|gb|EGI08634.1| IscR-regulated protein YhgI [Escherichia coli H736]
gi|331047007|gb|EGI19085.1| IscR-regulated protein YhgI [Escherichia coli M718]
gi|331052918|gb|EGI24951.1| IscR-regulated protein YhgI [Escherichia coli TA206]
gi|331057530|gb|EGI29516.1| IscR-regulated protein YhgI [Escherichia coli TA143]
gi|331062298|gb|EGI34218.1| IscR-regulated protein YhgI [Escherichia coli TA271]
gi|331067811|gb|EGI39209.1| IscR-regulated protein YhgI [Escherichia coli TA280]
gi|331072650|gb|EGI43975.1| IscR-regulated protein YhgI [Escherichia coli H591]
gi|331077427|gb|EGI48639.1| IscR-regulated protein YhgI [Escherichia coli H299]
gi|332085565|gb|EGI90731.1| nifU-like domain protein [Shigella boydii 5216-82]
gi|332090470|gb|EGI95568.1| nifU-like domain protein [Shigella boydii 3594-74]
gi|332104313|gb|EGJ07659.1| Fe/S biogenesis protein nfuA [Shigella sp. D9]
gi|332345367|gb|AEE58701.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|332749484|gb|EGJ79901.1| nifU-like domain protein [Shigella flexneri K-671]
gi|332750331|gb|EGJ80742.1| nifU-like domain protein [Shigella flexneri 4343-70]
gi|332751428|gb|EGJ81831.1| nifU-like domain protein [Shigella flexneri 2747-71]
gi|332763599|gb|EGJ93838.1| iron-sulfur cluster scaffold protein [Shigella flexneri 2930-71]
gi|332996395|gb|EGK16022.1| nifU-like domain protein [Shigella flexneri VA-6]
gi|332996634|gb|EGK16259.1| nifU-like domain protein [Shigella flexneri K-272]
gi|332997137|gb|EGK16753.1| nifU-like domain protein [Shigella flexneri K-218]
gi|333012337|gb|EGK31718.1| nifU-like domain protein [Shigella flexneri K-304]
gi|333013043|gb|EGK32419.1| nifU-like domain protein [Shigella flexneri K-227]
Length = 191
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + + + DG L G C+GC TLK
Sbjct: 101 VADDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQLLNEF-PELKGVR 178
>gi|320191574|gb|EFW66224.1| NfuA Fe-S protein maturation [Escherichia coli O157:H7 str. EC1212]
Length = 191
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + + + DG L G C+GC TLK
Sbjct: 101 VADDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQLLNEF-PELKGVR 178
>gi|331649212|ref|ZP_08350298.1| IscR-regulated protein YhgI [Escherichia coli M605]
gi|331041710|gb|EGI13854.1| IscR-regulated protein YhgI [Escherichia coli M605]
Length = 191
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + + + DG L G C+GC TLK
Sbjct: 101 VADDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQLLNEF-PELKGVR 178
>gi|116783204|gb|ABK22836.1| unknown [Picea sitchensis]
Length = 248
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
A+ + E++ + VRP + DGG++ +V L ++GAC CPS+ T+K G+
Sbjct: 97 ALTEENVEMVLDEVRPYLMSDGGNVELYDIDGLVVKLKLQGACGSCPSSLMTMKMGIERR 156
Query: 176 LNHFVPEVKDIRTV 189
L +PE+ + V
Sbjct: 157 LMEQIPEIVAVEQV 170
>gi|320181906|gb|EFW56812.1| NfuA Fe-S protein maturation [Shigella boydii ATCC 9905]
Length = 191
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + + + DG L G C+GC TLK
Sbjct: 101 VADDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQLLNEF-PELKGVR 178
>gi|242237773|ref|YP_002985954.1| DNA uptake protein [Dickeya dadantii Ech703]
gi|242129830|gb|ACS84132.1| IscR-regulated protein YhgI [Dickeya dadantii Ech703]
Length = 191
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ VL +++ P +A GG + + + +G L G C+GC TLK
Sbjct: 101 VSDDAPLMERVEYVLQSQINPQLAGHGGRVTLMEITEEGYAILQFGGGCNGCSMVDYTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLQKFPELKGVR 178
>gi|331700077|ref|YP_004336316.1| nitrogen-fixing NifU domain-containing protein [Pseudonocardia
dioxanivorans CB1190]
gi|326954766|gb|AEA28463.1| nitrogen-fixing NifU domain-containing protein [Pseudonocardia
dioxanivorans CB1190]
Length = 306
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
VRP + GGD+ F DG+ ++ + GAC+GC ++ TL+ V L VP ++ +
Sbjct: 115 VRPQLQSHGGDVAFAHVADGVAYVRLEGACNGCSMSAVTLRNLVEEALVAQVPAIRSV 172
>gi|296272416|ref|YP_003655047.1| nitrogen-fixing NifU domain-containing protein [Arcobacter
nitrofigilis DSM 7299]
gi|296096590|gb|ADG92540.1| nitrogen-fixing NifU domain protein [Arcobacter nitrofigilis DSM
7299]
Length = 326
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 117 VVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI----VFLSMRGACSGCPSASETLK 169
+VQRIK EVLD +RP +A DGG++ ++ +++ GAC+GC S
Sbjct: 247 IVQRIKLIDEVLDGEIRPMLAMDGGNMEIIDIKENTPHYDIYIRYLGACNGCASGDTGTL 306
Query: 170 YGVANILNHFVPE 182
Y + ++L V E
Sbjct: 307 YAIESVLKQKVDE 319
>gi|170724529|ref|YP_001758555.1| putative DNA uptake protein [Shewanella woodyi ATCC 51908]
gi|254767328|sp|B1KM47|NFUA_SHEWM RecName: Full=Fe/S biogenesis protein nfuA
gi|169809876|gb|ACA84460.1| IscR-regulated protein YhgI [Shewanella woodyi ATCC 51908]
Length = 192
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ SD+++ +RI+ V+ + + P +A GG+I + + DG+ L G C+GC TLK
Sbjct: 101 VASDASLNERIEYVIQSEINPQLASHGGNIMLLEVTEDGVAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVP 181
G+ L P
Sbjct: 161 DGIEKQLLEMFP 172
>gi|16804435|ref|NP_465920.1| hypothetical protein lmo2397 [Listeria monocytogenes EGD-e]
gi|47095874|ref|ZP_00233478.1| NifU family protein [Listeria monocytogenes str. 1/2a F6854]
gi|224500156|ref|ZP_03668505.1| hypothetical protein LmonF1_10934 [Listeria monocytogenes Finland
1988]
gi|224503455|ref|ZP_03671762.1| hypothetical protein LmonFR_13257 [Listeria monocytogenes FSL
R2-561]
gi|254827975|ref|ZP_05232662.1| NifU family protein [Listeria monocytogenes FSL N3-165]
gi|254831180|ref|ZP_05235835.1| hypothetical protein Lmon1_07458 [Listeria monocytogenes 10403S]
gi|254900468|ref|ZP_05260392.1| hypothetical protein LmonJ_11657 [Listeria monocytogenes J0161]
gi|254913294|ref|ZP_05263306.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937675|ref|ZP_05269372.1| NifU family protein [Listeria monocytogenes F6900]
gi|284802839|ref|YP_003414704.1| hypothetical protein LM5578_2596 [Listeria monocytogenes 08-5578]
gi|284995980|ref|YP_003417748.1| hypothetical protein LM5923_2545 [Listeria monocytogenes 08-5923]
gi|16411885|emb|CAD00475.1| lmo2397 [Listeria monocytogenes EGD-e]
gi|47015751|gb|EAL06680.1| NifU family protein [Listeria monocytogenes str. 1/2a F6854]
gi|258600358|gb|EEW13683.1| NifU family protein [Listeria monocytogenes FSL N3-165]
gi|258610275|gb|EEW22883.1| NifU family protein [Listeria monocytogenes F6900]
gi|284058401|gb|ADB69342.1| hypothetical protein LM5578_2596 [Listeria monocytogenes 08-5578]
gi|284061447|gb|ADB72386.1| hypothetical protein LM5923_2545 [Listeria monocytogenes 08-5923]
gi|293591295|gb|EFF99629.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 78
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 127 NRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
+ RP + RDGGD + + +DGIV + + GAC CPS+ TLK G+ L + K+
Sbjct: 14 KKFRPFLVRDGGDYELIEVTQDGIVKIKLLGACETCPSSDMTLKMGIELTLAEKIIGFKE 73
Query: 186 IRTV 189
+ V
Sbjct: 74 VVQV 77
>gi|269140629|ref|YP_003297330.1| hypothetical protein ETAE_3288 [Edwardsiella tarda EIB202]
gi|294638123|ref|ZP_06716379.1| IscR-regulated protein YhgI [Edwardsiella tarda ATCC 23685]
gi|267986290|gb|ACY86119.1| hypothetical protein ETAE_3288 [Edwardsiella tarda EIB202]
gi|291088690|gb|EFE21251.1| IscR-regulated protein YhgI [Edwardsiella tarda ATCC 23685]
gi|304560415|gb|ADM43079.1| NfuA [Edwardsiella tarda FL6-60]
Length = 191
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VADDAPLIERVEYILQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDYTLK 160
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ L PE+K +R +
Sbjct: 161 EGIEKELLQRFPELKGVRDL 180
>gi|28896920|ref|NP_796525.1| putative DNA uptake protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153837871|ref|ZP_01990538.1| thioredoxin [Vibrio parahaemolyticus AQ3810]
gi|260365893|ref|ZP_05778387.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus K5030]
gi|260877820|ref|ZP_05890175.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus AN-5034]
gi|260895531|ref|ZP_05904027.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus Peru-466]
gi|260902555|ref|ZP_05910950.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus AQ4037]
gi|51702006|sp|Q87TC4|NFUA_VIBPA RecName: Full=Fe/S biogenesis protein nfuA
gi|28805128|dbj|BAC58409.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149748734|gb|EDM59579.1| thioredoxin [Vibrio parahaemolyticus AQ3810]
gi|308088597|gb|EFO38292.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus Peru-466]
gi|308089948|gb|EFO39643.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus AN-5034]
gi|308109708|gb|EFO47248.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus AQ4037]
gi|308113467|gb|EFO51007.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus K5030]
gi|328471695|gb|EGF42572.1| Fe/S biogenesis protein NfuA [Vibrio parahaemolyticus 10329]
Length = 194
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +V+R++ V+ +V P +A GG + + + G+ ++ G C+GC TLK
Sbjct: 103 VSDDAPLVERVEYVIQTQVNPQLAGHGGHVNLVEITEAGVAIVAFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN FV E+ +R
Sbjct: 163 EGIEKELLNQFVGELTAVR 181
>gi|312141489|ref|YP_004008825.1| fe-s cluster assembly protein nifu-like [Rhodococcus equi 103S]
gi|311890828|emb|CBH50147.1| putative Fe-S cluster assembly protein NifU-like [Rhodococcus equi
103S]
Length = 311
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
V R++ LD+ VRP + GGD+ + DG+V L + G+C GCPS++ TL+ V
Sbjct: 95 VETRVRTALDS-VRPYLGSHGGDVELVDVTDDGVVRLRLLGSCHGCPSSAVTLQLAVEGA 153
Query: 176 LNHFVPEVKDI 186
+ PE I
Sbjct: 154 VQAAAPETTAI 164
>gi|288817769|ref|YP_003432116.1| nitrogen-fixing NifU-like protein [Hydrogenobacter thermophilus
TK-6]
gi|288787168|dbj|BAI68915.1| nitrogen-fixing NifU-like protein [Hydrogenobacter thermophilus
TK-6]
gi|308751367|gb|ADO44850.1| Rieske (2Fe-2S) iron-sulfur domain protein [Hydrogenobacter
thermophilus TK-6]
Length = 275
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+RP + GGD+ F ++ +++ +RG C+GC S TL+ + + ++P ++ +
Sbjct: 98 IRPYIRSHGGDVEFVDLKEKTLYVRLRGTCTGCSQVSFTLQQTILEAVQAYIPHIEKV 155
>gi|325677298|ref|ZP_08156964.1| Rieske family iron-sulfur cluster-binding protein [Rhodococcus equi
ATCC 33707]
gi|325551995|gb|EGD21691.1| Rieske family iron-sulfur cluster-binding protein [Rhodococcus equi
ATCC 33707]
Length = 311
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
V R++ LD+ VRP + GGD+ + DG+V L + G+C GCPS++ TL+ V
Sbjct: 95 VETRVRTALDS-VRPYLGSHGGDVELVDVTDDGVVRLRLLGSCHGCPSSAVTLQLAVEGA 153
Query: 176 LNHFVPEVKDI 186
+ PE I
Sbjct: 154 VQAAAPETTAI 164
>gi|260460215|ref|ZP_05808467.1| Rieske (2Fe-2S) domain protein [Mesorhizobium opportunistum
WSM2075]
gi|259033860|gb|EEW35119.1| Rieske (2Fe-2S) domain protein [Mesorhizobium opportunistum
WSM2075]
Length = 290
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+R++ LD VRP +A GG++ R + + GAC GCP+++ T GV +
Sbjct: 96 ERVEAALDG-VRPMLASHGGNVELVNVRPPAIEVRFVGACDGCPASALTFHAGVKKAIEE 154
Query: 179 FVPEVKDI 186
PE+ DI
Sbjct: 155 ACPEITDI 162
>gi|253690287|ref|YP_003019477.1| IscR-regulated protein YhgI [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259511744|sp|C6DH68|NFUA_PECCP RecName: Full=Fe/S biogenesis protein nfuA
gi|251756865|gb|ACT14941.1| IscR-regulated protein YhgI [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 191
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
++ + +++R++ VL +++ P +A GG + D G+ L G C+GC TLK
Sbjct: 101 VDDSAPLMERVEYVLQSQINPQLAGHGGRVTLMEITDDGMAILQFGGGCNGCSMVDYTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLEKFPELKGVR 178
>gi|120596952|ref|YP_961526.1| putative DNA uptake protein [Shewanella sp. W3-18-1]
gi|146294876|ref|YP_001185300.1| putative DNA uptake protein [Shewanella putrefaciens CN-32]
gi|150383450|sp|A1RE77|NFUA_SHESW RecName: Full=Fe/S biogenesis protein nfuA
gi|166990531|sp|A4YC18|NFUA_SHEPC RecName: Full=Fe/S biogenesis protein nfuA
gi|120557045|gb|ABM22972.1| HesB/YadR/YfhF-family protein [Shewanella sp. W3-18-1]
gi|145566566|gb|ABP77501.1| HesB/YadR/YfhF-family protein [Shewanella putrefaciens CN-32]
gi|319424543|gb|ADV52617.1| IscR-regulated protein YhgI [Shewanella putrefaciens 200]
Length = 192
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +V+RI+ V+ + + P +A GG+I+ + +G+ L G C+GC TLK
Sbjct: 101 VSGDAPLVERIEYVIQSEINPQLASHGGNIMLVEITSEGVAVLQFGGGCNGCSQVDITLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L+ F E+ +R V
Sbjct: 161 DGIEKQLLDMFPGELTGVRDV 181
>gi|238921502|ref|YP_002935017.1| DNA uptake protein [Edwardsiella ictaluri 93-146]
gi|259511742|sp|C5BGT5|NFUA_EDWI9 RecName: Full=Fe/S biogenesis protein nfuA
gi|238871071|gb|ACR70782.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 191
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VADDAPLIERVEYILQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDYTLK 160
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ L PE+K +R +
Sbjct: 161 EGIEKELLQRFPELKGVRDL 180
>gi|251787885|ref|YP_003002606.1| putative DNA uptake protein [Dickeya zeae Ech1591]
gi|247536506|gb|ACT05127.1| IscR-regulated protein YhgI [Dickeya zeae Ech1591]
Length = 191
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
D+ +++R++ VL +++ P +A GG + + + +G L G C+GC TLK G+
Sbjct: 104 DAPLMERVEYVLQSQINPQLAGHGGRVTLMEITEEGYAILQFGGGCNGCSMVDYTLKEGI 163
Query: 173 ANILNHFVPEVKDIR 187
L PE+K +R
Sbjct: 164 EKELLQKFPELKGVR 178
>gi|161505922|ref|YP_001573034.1| putative DNA uptake protein [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|189041726|sp|A9MMB3|NFUA_SALAR RecName: Full=Fe/S biogenesis protein nfuA
gi|160867269|gb|ABX23892.1| hypothetical protein SARI_04103 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 191
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ VL +++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VADDAPLMERVEYVLQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQLLNEF-PELKGVR 178
>gi|262273566|ref|ZP_06051380.1| NfuA Fe-S protein maturation [Grimontia hollisae CIP 101886]
gi|262222544|gb|EEY73855.1| NfuA Fe-S protein maturation [Grimontia hollisae CIP 101886]
Length = 194
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ V+ +V P +A GG I + + DG+ + G C+GC TLK
Sbjct: 103 VADDAPLLERVEYVIQTQVNPQLAGHGGHINLIEITEDGVAVIQFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L F E+K +R V
Sbjct: 163 DGIEKQLLEEFSGELKGVRDV 183
>gi|126663010|ref|ZP_01734008.1| hypothetical protein FBBAL38_06650 [Flavobacteria bacterium BAL38]
gi|126624668|gb|EAZ95358.1| hypothetical protein FBBAL38_06650 [Flavobacteria bacterium BAL38]
Length = 79
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 127 NRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
N +RP + DGGDI + D V + + GAC+ C + T+K GV + FVP+++
Sbjct: 15 NEIRPFLNSDGGDITLVEIIDDKHVKVRLEGACTNCSLSISTMKAGVETTIKKFVPQIET 74
Query: 186 IRTV 189
+ +
Sbjct: 75 VENI 78
>gi|238788981|ref|ZP_04632771.1| Fe/S bioproteinsis protein nfuA [Yersinia frederiksenii ATCC 33641]
gi|238723008|gb|EEQ14658.1| Fe/S bioproteinsis protein nfuA [Yersinia frederiksenii ATCC 33641]
Length = 191
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLK 169
++ ++ +++R++ VL +++ P +A GG + D + L G C+GC TLK
Sbjct: 101 VDDNAPLMERVEYVLQSQINPQLASHGGRVTLMEITPDALAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLQKFPELKGVR 178
>gi|295132384|ref|YP_003583060.1| NifU-like/thioredoxin-like protein [Zunongwangia profunda SM-A87]
gi|294980399|gb|ADF50864.1| NifU-like/thioredoxin-like protein [Zunongwangia profunda SM-A87]
Length = 80
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 128 RVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+RP + DGGDI D +V + + GAC GC TLK GV + +VP+++++
Sbjct: 16 EIRPFLESDGGDISLVAIEDDRLVKVQLEGACVGCSVNQMTLKSGVEMTIKKYVPQIEEV 75
>gi|311747521|ref|ZP_07721306.1| NifU domain protein [Algoriphagus sp. PR1]
gi|126574883|gb|EAZ79254.1| NifU domain protein [Algoriphagus sp. PR1]
Length = 82
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+I+ LD +RP + DGG++ + + D ++ + M G+C CP +S TLK GV + +
Sbjct: 7 NKIEFALDT-IRPYLEADGGNVRIVELTEDMVLRIEMLGSCGSCPMSSMTLKAGVEDAIK 65
Query: 178 HFVPEVKDIRTV 189
+PE+ + +
Sbjct: 66 RAIPEITKVEAI 77
>gi|222056132|ref|YP_002538494.1| Fe-S cluster assembly protein NifU [Geobacter sp. FRC-32]
gi|221565421|gb|ACM21393.1| Fe-S cluster assembly protein NifU [Geobacter sp. FRC-32]
Length = 286
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
+Q I+E L+N VRP + DGGD+ G V ++ R AC+GC S+ T K+
Sbjct: 214 MQLIQETLENEVRPQLWADGGDLELIDIDGGKVQIAFRKACAGCASSGFTAKF 266
>gi|260599716|ref|YP_003212287.1| Fe/S biogenesis protein NfuA [Cronobacter turicensis z3032]
gi|260218893|emb|CBA34248.1| Fe/S biogenesis protein nfuA [Cronobacter turicensis z3032]
Length = 191
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VADDAPLMERVEYLLQSQINPQLAGHGGRVTLMEITDEGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQLLNEF-PELKGVR 178
>gi|315283493|ref|ZP_07871670.1| nitrogen fixation protein NifU [Listeria marthii FSL S4-120]
gi|313612862|gb|EFR86827.1| nitrogen fixation protein NifU [Listeria marthii FSL S4-120]
Length = 78
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 127 NRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
+ RP + RDGGD + + +DGIV + + GAC CPS+ TLK G+ L + K+
Sbjct: 14 KKFRPFLVRDGGDYELVEVTQDGIVKIKLLGACETCPSSDMTLKMGIELTLAEKIIGFKE 73
Query: 186 IRTV 189
+ V
Sbjct: 74 VVQV 77
>gi|157963821|ref|YP_001503855.1| putative DNA uptake protein [Shewanella pealeana ATCC 700345]
gi|189041730|sp|A8H9T3|NFUA_SHEPA RecName: Full=Fe/S biogenesis protein nfuA
gi|157848821|gb|ABV89320.1| HesB/YadR/YfhF-family protein [Shewanella pealeana ATCC 700345]
Length = 192
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+++ +RI+ V+ + + P +A GG+I+ + DGI L G C+GC TLK
Sbjct: 101 VSDDASLSERIEYVIQSEINPQLASHGGNIMLVEITEDGIAVLQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L+ F E+ ++ V
Sbjct: 161 DGIEKQLLDMFPGELSGVKDV 181
>gi|126434715|ref|YP_001070406.1| NifU domain-containing protein [Mycobacterium sp. JLS]
gi|126234515|gb|ABN97915.1| nitrogen-fixing NifU domain protein [Mycobacterium sp. JLS]
Length = 294
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+V +RI + LD VRP + GGD+ G L G+C CPS++ TL+ V +
Sbjct: 94 SVERRITDALDT-VRPYLGSHGGDVHLLGVDGDTARLRFAGSCKSCPSSAVTLELAVEDA 152
Query: 176 LNHFVPEVKDIRTV 189
+ PE++ I V
Sbjct: 153 IRAAAPEIETIEVV 166
>gi|284043999|ref|YP_003394339.1| nitrogen-fixing NifU domain protein [Conexibacter woesei DSM 14684]
gi|283948220|gb|ADB50964.1| nitrogen-fixing NifU domain protein [Conexibacter woesei DSM 14684]
Length = 306
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+R++ LD VRP +A GGD+ ++G+ L + G+C GC +++ TL+ V L
Sbjct: 108 ERVRAALDE-VRPYLASHGGDVELLAVQEGVARLRLVGSCRGCAASASTLEAVVEQALEQ 166
Query: 179 FVPEV 183
P++
Sbjct: 167 AAPDL 171
>gi|218780491|ref|YP_002431809.1| Fe-S cluster assembly protein NifU [Desulfatibacillum alkenivorans
AK-01]
gi|218761875|gb|ACL04341.1| Fe-S cluster assembly protein NifU [Desulfatibacillum alkenivorans
AK-01]
Length = 271
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q I+E L+ VRP + +DGGDI V + ++G CS C ++ TLK V L
Sbjct: 200 IQLIQETLEREVRPTLKQDGGDIELVDVDGDKVLVRLQGRCSSCQASQATLKGHVEAKLR 259
Query: 178 HFV 180
V
Sbjct: 260 ELV 262
>gi|111608856|gb|ABH10986.1| Fe-S cluster assembly protein NifU [Polytomella parva]
Length = 168
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
D ++ + + LD +RP + DGGD+ ++G VFL +G+CS C S +T+K G+
Sbjct: 30 DVLSIENVNKSLD-YIRPVLMNDGGDVEIVKIQNGKVFLRFQGSCSTCTSQEDTMKGGIE 88
Query: 174 NILNHFVPEV 183
L E+
Sbjct: 89 TTLRSSFGEL 98
>gi|94270459|ref|ZP_01291748.1| Fe-S cluster assembly protein NifU [delta proteobacterium MLMS-1]
gi|93450788|gb|EAT01836.1| Fe-S cluster assembly protein NifU [delta proteobacterium MLMS-1]
Length = 277
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ I++VL+ ++PA+ +DGGDI V +S+RGAC+ C + T+K V L
Sbjct: 205 IKMIEDVLEREIKPALRKDGGDIELVDLDGDFVTVSLRGACASCKKSQTTIKDYVEKKLR 264
Query: 178 HFV 180
V
Sbjct: 265 EQV 267
>gi|94267278|ref|ZP_01290831.1| Fe-S cluster assembly protein NifU [delta proteobacterium MLMS-1]
gi|93452070|gb|EAT02758.1| Fe-S cluster assembly protein NifU [delta proteobacterium MLMS-1]
Length = 277
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ I++VL+ ++PA+ +DGGDI V +S+RGAC+ C + T+K V L
Sbjct: 205 IKMIEDVLEREIKPALRKDGGDIELVDLDGDFVTVSLRGACASCKKSQTTIKDYVEKKLR 264
Query: 178 HFV 180
V
Sbjct: 265 EQV 267
>gi|289668991|ref|ZP_06490066.1| hypothetical protein XcampmN_10969 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 200
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARD-GGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
G+ +++V+R++ V++N + P +A GG + + DG+V L G C GC A
Sbjct: 100 GEAPAESASMVERVRWVVENEINPQLASSHGGRVAVQEVSADGVVLLRFGGGCHGCGMAD 159
Query: 166 ETLKYGVANILNHFVPEVKDIR 187
TLK G+ L VP V +R
Sbjct: 160 VTLKQGIEKTLMGRVPGVIAVR 181
>gi|108799109|ref|YP_639306.1| nitrogen-fixing NifU-like protein [Mycobacterium sp. MCS]
gi|119868224|ref|YP_938176.1| NifU domain-containing protein [Mycobacterium sp. KMS]
gi|108769528|gb|ABG08250.1| nitrogen-fixing NifU-like protein [Mycobacterium sp. MCS]
gi|119694313|gb|ABL91386.1| nitrogen-fixing NifU domain protein [Mycobacterium sp. KMS]
Length = 294
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+V +RI + LD VRP + GGD+ G L G+C CPS++ TL+ V +
Sbjct: 94 SVERRITDALDT-VRPYLGSHGGDVHLLGVDGDTARLRFAGSCKSCPSSAVTLELAVEDA 152
Query: 176 LNHFVPEVKDIRTV 189
+ PE++ I V
Sbjct: 153 IRAAAPEIETIEVV 166
>gi|126656692|ref|ZP_01727906.1| hypothetical protein CY0110_23676 [Cyanothece sp. CCY0110]
gi|126621912|gb|EAZ92620.1| hypothetical protein CY0110_23676 [Cyanothece sp. CCY0110]
Length = 286
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILN 177
+RI++ L+ VRP + GD+ + V + + G CS CP+++ T+K GV +
Sbjct: 95 KRIQQALET-VRPGLKSHHGDVELVAIKLPDTVEVQLVGTCSNCPASTLTMKQGVEQAIK 153
Query: 178 HFVPEVKDIRTV 189
+ PE+K++ +V
Sbjct: 154 TYCPEIKNVISV 165
>gi|254421266|ref|ZP_05034984.1| Fe-S cluster assembly protein NifU [Synechococcus sp. PCC 7335]
gi|196188755|gb|EDX83719.1| Fe-S cluster assembly protein NifU [Synechococcus sp. PCC 7335]
Length = 294
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I++V+ VRP + DGGDI +V + + GAC GC S+SETLK + L
Sbjct: 223 INLIQQVIAEDVRPILLADGGDIELYDVDGDVVRVLLTGACGGCASSSETLKNSIETSLQ 282
Query: 178 HFV 180
V
Sbjct: 283 AKV 285
>gi|156936423|ref|YP_001440339.1| putative DNA uptake protein [Cronobacter sakazakii ATCC BAA-894]
gi|166990524|sp|A7ME80|NFUA_ENTS8 RecName: Full=Fe/S biogenesis protein nfuA
gi|156534677|gb|ABU79503.1| hypothetical protein ESA_04324 [Cronobacter sakazakii ATCC BAA-894]
Length = 191
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VADDAPLMERVEYMLQSQINPQLAGHGGRVTLMEITDEGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQLLNEF-PELKGVR 178
>gi|148263889|ref|YP_001230595.1| Fe-S cluster assembly protein NifU [Geobacter uraniireducens Rf4]
gi|146397389|gb|ABQ26022.1| Fe-S cluster assembly protein NifU [Geobacter uraniireducens Rf4]
Length = 286
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
+Q I+E L+N VRP + DGGD+ G V ++ R AC+GC S+ T K+
Sbjct: 214 MQLIQETLENEVRPQLWADGGDLELIDIDGGKVQIAFRKACAGCASSGFTAKF 266
>gi|271502336|ref|YP_003335362.1| IscR-regulated protein YhgI [Dickeya dadantii Ech586]
gi|270345891|gb|ACZ78656.1| IscR-regulated protein YhgI [Dickeya dadantii Ech586]
Length = 191
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
D+ +++R++ VL +++ P +A GG + + + +G L G C+GC TLK G+
Sbjct: 104 DAPLMERVEYVLQSQINPQLAGHGGRVSLMEITEEGYAILQFGGGCNGCSMVDYTLKEGI 163
Query: 173 ANILNHFVPEVKDIR 187
L PE+K +R
Sbjct: 164 EKELLEKFPELKGVR 178
>gi|94676599|ref|YP_588921.1| yhgI protein [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
gi|254767291|sp|Q1LSZ3|NFUA_BAUCH RecName: Full=Fe/S biogenesis protein nfuA
gi|94219749|gb|ABF13908.1| yhgI protein [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
Length = 190
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 96 GLGDMKLDDMGSG---------DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY- 145
L D LD++G+ + I+S++ +++R+ +++ + + P +A GG +
Sbjct: 76 ALIDCVLDELGTQLIIQAPHLIEKIDSNTPLLERVNQIILSCINPQLANHGGKVTLITIT 135
Query: 146 RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
D + G C+GC S TLK + L PE+K ++
Sbjct: 136 EDMFAIIQFSGGCNGCSMVSYTLKEHIEKKLLQLFPELKGVK 177
>gi|296271179|ref|YP_003653811.1| nitrogen-fixing NifU domain-containing protein [Thermobispora
bispora DSM 43833]
gi|296093966|gb|ADG89918.1| nitrogen-fixing NifU domain protein [Thermobispora bispora DSM
43833]
Length = 289
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+RP V GGD+ DG+ ++ ++GAC+GC + + L+ G+ L VP + +
Sbjct: 101 IRPMVRSHGGDVELVRVEDGVAYVRLKGACTGCSAPAVALREGIEEALIERVPAITRV 158
>gi|294944201|ref|XP_002784137.1| hypothetical protein Pmar_PMAR003391 [Perkinsus marinus ATCC 50983]
gi|239897171|gb|EER15933.1| hypothetical protein Pmar_PMAR003391 [Perkinsus marinus ATCC 50983]
Length = 345
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANI 175
VQ++ LD VRP +A DGG + G D G V + GACS C + + KYG+ ++
Sbjct: 189 TVQQVDRALDA-VRPGLAMDGGGVRVLGVEDDGRVRVLFTGACSSCALSDTSTKYGLWDV 247
Query: 176 LNHFVPEVKDIRTV 189
L+ P + I TV
Sbjct: 248 LSSKFPVLTSIETV 261
>gi|50123054|ref|YP_052221.1| putative DNA uptake protein [Pectobacterium atrosepticum SCRI1043]
gi|81643699|sp|Q6CZL7|NFUA_ERWCT RecName: Full=Fe/S biogenesis protein nfuA
gi|49613580|emb|CAG77031.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 191
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
++ + +++R++ VL +++ P +A GG + D G+ L G C+GC TLK
Sbjct: 101 VDDSAPLMERVEYVLQSQINPQLAGHGGRVTLMEITDDGLAILQFGGGCNGCSMVDFTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLEKFPELKGVR 178
>gi|197286755|ref|YP_002152627.1| DNA uptake protein [Proteus mirabilis HI4320]
gi|227355054|ref|ZP_03839465.1| HesB family protein [Proteus mirabilis ATCC 29906]
gi|254767308|sp|B4EZM8|NFUA_PROMH RecName: Full=Fe/S biogenesis protein nfuA
gi|194684242|emb|CAR45763.1| putative gluconate metabolism protein (putative iron-sulphur
cluster biosynthesis) [Proteus mirabilis HI4320]
gi|227164841|gb|EEI49688.1| HesB family protein [Proteus mirabilis ATCC 29906]
Length = 192
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ VL +++ P +A GG + + + DG L G C+GC TLK
Sbjct: 101 VADDAPLIERVEYVLQSQINPQLASHGGRVSLMEITEDGYAILQFGGGCNGCSMIDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F E+K ++
Sbjct: 161 DGIEKELLNLFPEELKGVK 179
>gi|291277316|ref|YP_003517088.1| NifU-like protein [Helicobacter mustelae 12198]
gi|290964510|emb|CBG40362.1| nifU protein homolog [Helicobacter mustelae 12198]
Length = 326
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 107 SGDFIESDSAVVQRIKEV---LDNRVRPAVARDGGDIVFKGYRDGI-----VFLSMRGAC 158
+G+ +D +VQRIK V +++++RP + DGGD+ +D +++ GAC
Sbjct: 236 NGELSFADMTMVQRIKTVDKTINDQIRPMLLMDGGDLEILDIKDSSDGHFDIYIRYMGAC 295
Query: 159 SGCPSASETLKYGVANILNHFV-PEVK 184
SGC SAS + + IL + P+++
Sbjct: 296 SGCASASTGTLFAIEGILQENLDPKIR 322
>gi|46908571|ref|YP_014960.1| NifU family protein [Listeria monocytogenes serotype 4b str. F2365]
gi|47092981|ref|ZP_00230761.1| NifU family protein [Listeria monocytogenes str. 4b H7858]
gi|217963499|ref|YP_002349177.1| hypothetical protein LMHCC_0201 [Listeria monocytogenes HCC23]
gi|226224948|ref|YP_002759055.1| NifU family protein [Listeria monocytogenes Clip81459]
gi|254825479|ref|ZP_05230480.1| NifU family protein [Listeria monocytogenes FSL J1-194]
gi|254853597|ref|ZP_05242945.1| NifU family protein [Listeria monocytogenes FSL R2-503]
gi|254933176|ref|ZP_05266535.1| NifU family protein [Listeria monocytogenes HPB2262]
gi|254994154|ref|ZP_05276344.1| NifU family protein [Listeria monocytogenes FSL J2-064]
gi|255521513|ref|ZP_05388750.1| NifU family protein [Listeria monocytogenes FSL J1-175]
gi|290894179|ref|ZP_06557149.1| NifU family protein [Listeria monocytogenes FSL J2-071]
gi|300765271|ref|ZP_07075256.1| NifU family protein [Listeria monocytogenes FSL N1-017]
gi|46881843|gb|AAT05137.1| NifU family protein [Listeria monocytogenes serotype 4b str. F2365]
gi|47018635|gb|EAL09388.1| NifU family protein [Listeria monocytogenes str. 4b H7858]
gi|217332769|gb|ACK38563.1| conserved domain protein [Listeria monocytogenes HCC23]
gi|225877410|emb|CAS06124.1| Putative NifU family protein [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258606971|gb|EEW19579.1| NifU family protein [Listeria monocytogenes FSL R2-503]
gi|290556242|gb|EFD89786.1| NifU family protein [Listeria monocytogenes FSL J2-071]
gi|293584734|gb|EFF96766.1| NifU family protein [Listeria monocytogenes HPB2262]
gi|293594721|gb|EFG02482.1| NifU family protein [Listeria monocytogenes FSL J1-194]
gi|300514092|gb|EFK41154.1| NifU family protein [Listeria monocytogenes FSL N1-017]
gi|307571927|emb|CAR85106.1| NifU family protein [Listeria monocytogenes L99]
gi|313607074|gb|EFR83599.1| nitrogen fixation protein NifU [Listeria monocytogenes FSL F2-208]
gi|328471461|gb|EGF42355.1| NifU family protein [Listeria monocytogenes 220]
gi|332312829|gb|EGJ25924.1| Nitrogen-fixing NifU protein [Listeria monocytogenes str. Scott A]
Length = 78
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 127 NRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
+ RP + RDGGD + + +DG+V + + GAC CPS+ TLK G+ L + K+
Sbjct: 14 KKFRPFLVRDGGDYELIEVTQDGVVKIKLLGACETCPSSDMTLKMGIELTLAEKIIGFKE 73
Query: 186 IRTV 189
+ V
Sbjct: 74 VVQV 77
>gi|328465264|gb|EGF36521.1| NifU family protein [Listeria monocytogenes 1816]
Length = 82
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 127 NRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
+ RP + RDGGD + + +DG+V + + GAC CPS+ TLK G+ L + +K
Sbjct: 14 KKFRPFLVRDGGDYELIEVTQDGVVKIKLLGACETCPSSDMTLKMGIELTLAEKLLALKK 73
Query: 186 I 186
+
Sbjct: 74 L 74
>gi|242278148|ref|YP_002990277.1| nitrogen-fixing NifU domain protein [Desulfovibrio salexigens DSM
2638]
gi|242121042|gb|ACS78738.1| nitrogen-fixing NifU domain protein [Desulfovibrio salexigens DSM
2638]
Length = 74
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNH 178
+++ LD +VRP + DGG++ D GI + ++GAC GCP + TL+ + L
Sbjct: 4 KVEAALD-KVRPLLQADGGNVELVEVTDKGIAKVRLQGACKGCPMSQITLRNAIERTLLK 62
Query: 179 FVPEVKDI 186
+PE+K +
Sbjct: 63 EIPELKGV 70
>gi|228473254|ref|ZP_04058008.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
33624]
gi|228275156|gb|EEK13954.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
33624]
Length = 79
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANI 175
++QR++ L +RP + DGGDI G D IV + + G+C C TLK GV
Sbjct: 6 LLQRVETAL-AEIRPYLQNDGGDISLIGIEDDKIVKVKLLGSCLSCSVNQMTLKSGVEMT 64
Query: 176 LNHFVPEVKDI 186
+ + PE++ +
Sbjct: 65 IKKYAPEIEKV 75
>gi|260061614|ref|YP_003194694.1| hypothetical protein RB2501_08435 [Robiginitalea biformata
HTCC2501]
gi|88785746|gb|EAR16915.1| hypothetical protein RB2501_08435 [Robiginitalea biformata
HTCC2501]
Length = 79
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYG 171
+ + +I+ L+ +RP + DGGDI G DG V + + GAC GC TLK G
Sbjct: 2 TSEELTSKIEAALEE-IRPFLQSDGGDISLVGIEDGTRVKVRLEGACVGCTVNQMTLKSG 60
Query: 172 VANILNHFVPEVKDI 186
V + P+++ +
Sbjct: 61 VEMTIKKHAPQIEQV 75
>gi|114561432|ref|YP_748945.1| putative DNA uptake protein [Shewanella frigidimarina NCIMB 400]
gi|119370614|sp|Q089F8|NFUA_SHEFN RecName: Full=Fe/S biogenesis protein nfuA
gi|114332725|gb|ABI70107.1| HesB/YadR/YfhF-family protein [Shewanella frigidimarina NCIMB 400]
Length = 192
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +V+RI+ ++ + + P +A GG+I+ + G+ L G C+GC TLK
Sbjct: 101 VSGDAPLVERIEYIIQSEINPQLASHGGNIMLVEITEAGVAVLQFGGGCNGCSQVDITLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L+ F E+ +R V
Sbjct: 161 DGIEKQLLDMFPTELTGVRDV 181
>gi|83593605|ref|YP_427357.1| nitrogen-fixing NifU-like [Rhodospirillum rubrum ATCC 11170]
gi|83576519|gb|ABC23070.1| Nitrogen-fixing NifU-like [Rhodospirillum rubrum ATCC 11170]
Length = 99
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
S A ++ EVL+ +RP + RD GDI D +F+++ GAC GC +S TL
Sbjct: 2 SQQAFEAKVAEVLETVIRPRLRRDNGDIELVRIEDHKIFVTLTGACVGCQLSSITL 57
>gi|292489916|ref|YP_003532806.1| protein gntY [Erwinia amylovora CFBP1430]
gi|292900951|ref|YP_003540320.1| Fe-S protein [Erwinia amylovora ATCC 49946]
gi|291200799|emb|CBJ47933.1| putative Fe-S protein [Erwinia amylovora ATCC 49946]
gi|291555353|emb|CBA23723.1| Protein gntY [Erwinia amylovora CFBP1430]
gi|312174100|emb|CBX82353.1| Protein gntY [Erwinia amylovora ATCC BAA-2158]
Length = 191
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L ++ P +A GG + + + DG L G C+GC TLK
Sbjct: 101 VSDDAPLIERVEYLLQAQINPQLASHGGKVSLMEITDDGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ + PE+K +R
Sbjct: 161 EGIEKEMLAAFPELKGVR 178
>gi|311277652|ref|YP_003939883.1| IscR-regulated protein YhgI [Enterobacter cloacae SCF1]
gi|308746847|gb|ADO46599.1| IscR-regulated protein YhgI [Enterobacter cloacae SCF1]
Length = 191
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VSDDAPLMERVEYLLQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQLLNEF-PELKGVR 178
>gi|226306139|ref|YP_002766099.1| hypothetical protein RER_26520 [Rhodococcus erythropolis PR4]
gi|226185256|dbj|BAH33360.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 300
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V R++ LD+ VRP + GGD+ DG+V L + G+C+ CPS+S TL+ V + +
Sbjct: 83 VETRVRTALDS-VRPYLGSHGGDVELIEVADGVVRLRLLGSCNSCPSSSVTLETAVQDAV 141
Query: 177 NHFVPEVKDI 186
PE I
Sbjct: 142 QAAAPETTGI 151
>gi|224418982|ref|ZP_03656988.1| NifU-like protein [Helicobacter canadensis MIT 98-5491]
gi|253827929|ref|ZP_04870814.1| NifU-like protein [Helicobacter canadensis MIT 98-5491]
gi|313142494|ref|ZP_07804687.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253511335|gb|EES89994.1| NifU-like protein [Helicobacter canadensis MIT 98-5491]
gi|313131525|gb|EFR49142.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 326
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 101 KLDDMGSGDFIESDSAVVQRIKEV---LDNRVRPAVARDGGD---IVFKGYRDGI--VFL 152
K D GD +D +VQ+IK + +D ++RP + DGG+ I K DG V++
Sbjct: 230 KADLESKGDLKFADMTLVQKIKAIESLIDEKIRPMLMMDGGNMEIIELKNSSDGYTDVYI 289
Query: 153 SMRGACSGCPSASETLKYGVANILNH 178
GACSGC S + + + ++L
Sbjct: 290 RYLGACSGCASGATGTLFAIESVLQE 315
>gi|325114501|emb|CBZ50057.1| at4g25910 protein, related [Neospora caninum Liverpool]
Length = 285
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 121 IKEVLDNRVRPAVARDGGDI--VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+++VL++ VRP + GG++ V + I L+ +GACSGCPSA +TL G+ L
Sbjct: 64 VEQVLES-VRPYLRSHGGNVKLVELDSENRIARLAFKGACSGCPSAQQTLYEGLQGALRE 122
Query: 179 FVPEVK 184
P+++
Sbjct: 123 VWPDIR 128
>gi|289643389|ref|ZP_06475510.1| iron-sulfur cluster assembly accessory protein [Frankia symbiont of
Datisca glomerata]
gi|289506787|gb|EFD27765.1| iron-sulfur cluster assembly accessory protein [Frankia symbiont of
Datisca glomerata]
Length = 198
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E D + R + +VRP + RDGGD+ G+V + + GAC GC +A +TL
Sbjct: 120 EGDEDTLWRQVDEAIQQVRPFLQRDGGDVTVVDITAGVVSVRLTGACGGCSAALDTLTGV 179
Query: 172 VANILNHFVPEVKDI 186
+ L VP V+ +
Sbjct: 180 IERQLKESVPAVERV 194
>gi|296105108|ref|YP_003615254.1| putative DNA uptake protein [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295059567|gb|ADF64305.1| putative DNA uptake protein [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 191
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VSDDAPLMERVEYLLQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQLLNEF-PELKGVR 178
>gi|304397831|ref|ZP_07379707.1| IscR-regulated protein YhgI [Pantoea sp. aB]
gi|304354542|gb|EFM18913.1| IscR-regulated protein YhgI [Pantoea sp. aB]
Length = 191
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +V+R++ +L ++ P +A GG + + + DG L G C+GC TLK
Sbjct: 101 VSDDAPMVERVEYLLQAQINPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMIDVTLK 160
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ L PE+K +R +
Sbjct: 161 DGIEKELLAAFPELKGVRDI 180
>gi|157165751|ref|YP_001467687.1| hypothetical protein CCC13826_1742 [Campylobacter concisus 13826]
gi|112800805|gb|EAT98149.1| NifU family protein [Campylobacter concisus 13826]
Length = 91
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD +++ + L +V P + DGG + G ++G +++ + G C GC +++ TLKYG+
Sbjct: 5 SDEELLKPVTASL-QKVLPMLENDGGGMELLGIKNGKIYVRLTGHCHGCAASTTTLKYGI 63
Query: 173 ANIL 176
L
Sbjct: 64 ERQL 67
>gi|229490939|ref|ZP_04384774.1| nitrogen-fixing NifU domain protein [Rhodococcus erythropolis
SK121]
gi|229322329|gb|EEN88115.1| nitrogen-fixing NifU domain protein [Rhodococcus erythropolis
SK121]
Length = 300
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V R++ LD+ VRP + GGD+ DG+V L + G+C+ CPS+S TL+ V + +
Sbjct: 83 VETRVRTALDS-VRPYLGSHGGDVELIEVADGVVRLRLLGSCNSCPSSSVTLETAVQDAV 141
Query: 177 NHFVPEVKDI 186
PE I
Sbjct: 142 QAAAPETTGI 151
>gi|312890429|ref|ZP_07749966.1| nitrogen-fixing NifU domain protein [Mucilaginibacter paludis DSM
18603]
gi|311297199|gb|EFQ74331.1| nitrogen-fixing NifU domain protein [Mucilaginibacter paludis DSM
18603]
Length = 92
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
++ +++ LD +RP + DGG++ V + D +V L + G+C CP + TLK G+
Sbjct: 3 ILDQVEAALDT-IRPYLETDGGNVSVEEITADNVVKLKLLGSCGSCPMSIMTLKAGIEQA 61
Query: 176 LNHFVPEVKDIRTV 189
+ VPEV + +
Sbjct: 62 IKKAVPEVTGVEAI 75
>gi|238765194|ref|ZP_04626125.1| Fe/S bioproteinsis protein nfuA [Yersinia kristensenii ATCC 33638]
gi|238696577|gb|EEP89363.1| Fe/S bioproteinsis protein nfuA [Yersinia kristensenii ATCC 33638]
Length = 191
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLK 169
++ ++ +++R++ VL +++ P +A GG + D + L G C+GC TLK
Sbjct: 101 VDDNAPLMERVEYVLQSQINPQLAGHGGRVTLMEITPDALAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLQKFPELKGVR 178
>gi|836637|emb|CAA83509.1| nifU [Nostoc sp. PCC 6720]
gi|1091584|prf||2021269A dinitrogenase reductase
Length = 87
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I++VLD VRP + DGGD+ IV + ++GAC C S++ TLK + + L +
Sbjct: 18 IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRI 77
>gi|332520071|ref|ZP_08396535.1| nitrogen-fixing NifU domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332044630|gb|EGI80824.1| nitrogen-fixing NifU domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 80
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 128 RVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+RP + DGGDI D +V + ++GAC GC TLK GV + + P+++ +
Sbjct: 16 EIRPFLQSDGGDITLLSIEDDKLVKVQLQGACVGCSVNQMTLKSGVEMTIKKYAPQIEKV 75
>gi|304413450|ref|ZP_07394923.1| Fe/S biogenesis protein [Candidatus Regiella insecticola LSR1]
gi|304284293|gb|EFL92686.1| Fe/S biogenesis protein [Candidatus Regiella insecticola LSR1]
Length = 191
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ VL +++ P +A GG + D L G C+GC TLK
Sbjct: 101 VADDAPLMERVEYVLQSKINPQLASHGGRVTLMEITDDAFAVLQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K ++
Sbjct: 161 NGIEKELLQTFPELKGVK 178
>gi|167041235|gb|ABZ05992.1| putative HesB-like domain protein [uncultured marine microorganism
HF4000_001N02]
Length = 189
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
Q++ +++ + PAVA GG + G + ++ G C GC A TLK GV ++
Sbjct: 108 QKVADIITQEINPAVASHGGVVELVGVDEDKAIIAFGGGCQGCGMADVTLKQGVEVMIKD 167
Query: 179 FVPEVKDI 186
VPE+ ++
Sbjct: 168 KVPEIIEV 175
>gi|163748829|ref|ZP_02156081.1| yhgI protein [Shewanella benthica KT99]
gi|161331603|gb|EDQ02408.1| yhgI protein [Shewanella benthica KT99]
Length = 192
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ SD+++ +RI+ V+ + + P +A GG+I+ + +G+ L G C+GC TLK
Sbjct: 101 VNSDASLNERIEYVIQSEINPQLASHGGNIMLMEVSEEGVAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVP----EVKDI 186
G+ L P VKDI
Sbjct: 161 DGIEKQLLEMFPGELTGVKDI 181
>gi|116873760|ref|YP_850541.1| NifU family protein [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116742638|emb|CAK21762.1| NifU family protein [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 78
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPS 163
M +IE D A+ + RP + RDGGD + + DGIV + + GAC CPS
Sbjct: 1 MEEISYIEVDKAL---------KKFRPFLVRDGGDYELIEVTPDGIVKIKLLGACETCPS 51
Query: 164 ASETLKYGVANILNHFVPEVKDIRTV 189
+ TLK G+ L + K++ V
Sbjct: 52 SDMTLKMGIELTLAEKIIGFKEVVQV 77
>gi|24376092|ref|NP_720135.1| putative DNA uptake protein [Shewanella oneidensis MR-1]
gi|51702012|sp|Q8E8P2|NFUA_SHEON RecName: Full=Fe/S biogenesis protein nfuA
gi|24351118|gb|AAN57579.1|AE015893_8 yhgI protein [Shewanella oneidensis MR-1]
Length = 192
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLK 169
+ D+ +V+RI+ V+ + + P +A GG+I+ +G+ L G C+GC TLK
Sbjct: 101 VAGDAPLVERIEYVIQSEINPQLASHGGNIMLVEITGEGVAVLQFGGGCNGCSQVDITLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L+ F E+ +R V
Sbjct: 161 DGIEKQLLDMFPGELTGVRDV 181
>gi|254282987|ref|ZP_04957955.1| IscR-regulated protein YhgI [gamma proteobacterium NOR51-B]
gi|219679190|gb|EED35539.1| IscR-regulated protein YhgI [gamma proteobacterium NOR51-B]
Length = 191
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
++ DS + RI +L N V P++A GG++ D L G C GC + TLK
Sbjct: 101 VDPDSPIEDRINYILYNEVNPSLAAHGGEVSLVEVTDEKYAILRFGGGCQGCSAVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
GV L +PE+ +R
Sbjct: 161 DGVEKTLVEQLPELTGVR 178
>gi|123444169|ref|YP_001008139.1| putative DNA uptake protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332163339|ref|YP_004299916.1| putative DNA uptake protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|150383451|sp|A1JSF6|NFUA_YERE8 RecName: Full=Fe/S biogenesis protein nfuA
gi|122091130|emb|CAL14013.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318607833|emb|CBY29331.1| nfua Fe-S protein maturation [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325667569|gb|ADZ44213.1| putative DNA uptake protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862994|emb|CBX73127.1| Fe/S biogenesis protein nfuA [Yersinia enterocolitica W22703]
Length = 191
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLK 169
++ ++ +++R++ VL +++ P +A GG + D + L G C+GC TLK
Sbjct: 101 VDDNAPLMERVEYVLQSQINPQLAGHGGRVTLMEITPDALAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLQKFPELKGVR 178
>gi|188991774|ref|YP_001903784.1| Thioredoxin-like protein [Xanthomonas campestris pv. campestris
str. B100]
gi|254767335|sp|B0RTH4|NFUA_XANCB RecName: Full=Fe/S biogenesis protein nfuA
gi|167733534|emb|CAP51738.1| Thioredoxin-like protein [Xanthomonas campestris pv. campestris]
Length = 199
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASE 166
G+ +++V+ ++ V++N + P +A GG + + +G+V L G C GC A
Sbjct: 100 GEAPAESASMVECVRWVVENEINPQLASHGGRVAVQEVSAEGVVLLRFGGGCHGCGMADV 159
Query: 167 TLKYGVANILNHFVPEVKDIR 187
TLK G+ L VP V +R
Sbjct: 160 TLKQGIEKTLMGRVPGVIAVR 180
>gi|326772596|ref|ZP_08231880.1| conserved hypothetical protein [Actinomyces viscosus C505]
gi|326637228|gb|EGE38130.1| conserved hypothetical protein [Actinomyces viscosus C505]
Length = 178
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
D A+ +++ D + V GG +V RDG+V ++M GAC CP+A T+
Sbjct: 101 DDALEAAARQIADGSLGTFVNSHGGALVVHSVRDGVVEIAMEGACDHCPAAEITMHARFE 160
Query: 174 NILNHFVPEVKDIRTV 189
++L P + ++R +
Sbjct: 161 HLLRRRCPWLVEVRRI 176
>gi|238758685|ref|ZP_04619859.1| Fe/S bioproteinsis protein nfuA [Yersinia aldovae ATCC 35236]
gi|238702982|gb|EEP95525.1| Fe/S bioproteinsis protein nfuA [Yersinia aldovae ATCC 35236]
Length = 191
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLK 169
++ ++ +++R++ VL +++ P +A GG + D + L G C+GC TLK
Sbjct: 101 VDDNAPLMERVEYVLQSQINPQLAGHGGRVTLMEITPDALAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLQKFPELKGVR 178
>gi|157148997|ref|YP_001456316.1| putative DNA uptake protein [Citrobacter koseri ATCC BAA-895]
gi|166990520|sp|A8AQW7|NFUA_CITK8 RecName: Full=Fe/S biogenesis protein nfuA
gi|157086202|gb|ABV15880.1| hypothetical protein CKO_04835 [Citrobacter koseri ATCC BAA-895]
Length = 191
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VADDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQLLNEF-PELKGVR 178
>gi|325066683|ref|ZP_08125356.1| NifU-like protein [Actinomyces oris K20]
Length = 178
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
D A+ +++ D + V GG +V RDG+V ++M GAC CP+A T+
Sbjct: 101 DDALEAAARQIADGSLGTFVNSHGGALVVHSVRDGVVEIAMEGACDHCPAAEITMHARFE 160
Query: 174 NILNHFVPEVKDIRTV 189
++L P + ++R +
Sbjct: 161 HLLRRRCPWLVEVRRI 176
>gi|169831222|ref|YP_001717204.1| NifU domain-containing protein [Candidatus Desulforudis audaxviator
MP104C]
gi|169638066|gb|ACA59572.1| nitrogen-fixing NifU domain protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 43
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSG 160
++++EVL N+VRP + RDGGD+ +DG+V + ++GAC G
Sbjct: 3 EKVEEVL-NKVRPYLQRDGGDVELVDVKDGVVHVRLKGACRG 43
>gi|88798134|ref|ZP_01113721.1| Thioredoxin-like protein [Reinekea sp. MED297]
gi|88779331|gb|EAR10519.1| Thioredoxin-like protein [Reinekea sp. MED297]
Length = 196
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ DS + ++ +L + P +A GGD+ + D + L G C GC + TLK
Sbjct: 105 VTKDSPLPDQVNYILYTEINPGLAAHGGDVSLEELTDDNVAVLRFGGGCQGCSAVDMTLK 164
Query: 170 YGVANILNHFVPEVKDIRTV 189
GV L VP++ +R V
Sbjct: 165 DGVEKTLMERVPQLAGVRDV 184
>gi|22127773|ref|NP_671196.1| putative DNA uptake protein [Yersinia pestis KIM 10]
gi|45439990|ref|NP_991529.1| putative DNA uptake protein [Yersinia pestis biovar Microtus str.
91001]
gi|51598063|ref|YP_072254.1| DNA uptake protein [Yersinia pseudotuberculosis IP 32953]
gi|108809333|ref|YP_653249.1| putative DNA uptake protein [Yersinia pestis Antiqua]
gi|108814098|ref|YP_649865.1| putative DNA uptake protein [Yersinia pestis Nepal516]
gi|145597377|ref|YP_001161452.1| putative DNA uptake protein [Yersinia pestis Pestoides F]
gi|150260809|ref|ZP_01917537.1| predicted gluconate transport associated protein [Yersinia pestis
CA88-4125]
gi|153947285|ref|YP_001402938.1| DNA uptake protein [Yersinia pseudotuberculosis IP 31758]
gi|162421404|ref|YP_001608065.1| putative DNA uptake protein [Yersinia pestis Angola]
gi|165928048|ref|ZP_02223880.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165936266|ref|ZP_02224835.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|166010431|ref|ZP_02231329.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166214579|ref|ZP_02240614.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167399248|ref|ZP_02304772.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167419001|ref|ZP_02310754.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167426539|ref|ZP_02318292.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167468684|ref|ZP_02333388.1| hesB-like domain/nifU-like domain protein [Yersinia pestis FV-1]
gi|170022424|ref|YP_001718929.1| putative DNA uptake protein [Yersinia pseudotuberculosis YPIII]
gi|186897263|ref|YP_001874375.1| putative DNA uptake protein [Yersinia pseudotuberculosis PB1/+]
gi|218927338|ref|YP_002345213.1| putative DNA uptake protein [Yersinia pestis CO92]
gi|229836393|ref|ZP_04456560.1| predicted gluconate transport associated protein [Yersinia pestis
Pestoides A]
gi|229839982|ref|ZP_04460141.1| predicted gluconate transport associated protein [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229842063|ref|ZP_04462218.1| predicted gluconate transport associated protein [Yersinia pestis
biovar Orientalis str. India 195]
gi|229904636|ref|ZP_04519747.1| predicted gluconate transport associated protein [Yersinia pestis
Nepal516]
gi|270488149|ref|ZP_06205223.1| IscR-regulated protein YhgI [Yersinia pestis KIM D27]
gi|294502220|ref|YP_003566282.1| hypothetical protein YPZ3_0110 [Yersinia pestis Z176003]
gi|51702126|sp|Q8ZJI0|NFUA_YERPE RecName: Full=Fe/S biogenesis protein nfuA
gi|81638196|sp|Q664J6|NFUA_YERPS RecName: Full=Fe/S biogenesis protein nfuA
gi|119370621|sp|Q1C2L8|NFUA_YERPA RecName: Full=Fe/S biogenesis protein nfuA
gi|119370622|sp|Q1CCL5|NFUA_YERPN RecName: Full=Fe/S biogenesis protein nfuA
gi|166990533|sp|A7FNW0|NFUA_YERP3 RecName: Full=Fe/S biogenesis protein nfuA
gi|166990534|sp|A4TGR7|NFUA_YERPP RecName: Full=Fe/S biogenesis protein nfuA
gi|254767339|sp|B2K5V9|NFUA_YERPB RecName: Full=Fe/S biogenesis protein nfuA
gi|254767340|sp|A9R4D2|NFUA_YERPG RecName: Full=Fe/S biogenesis protein nfuA
gi|254767341|sp|B1JHZ3|NFUA_YERPY RecName: Full=Fe/S biogenesis protein nfuA
gi|21960901|gb|AAM87447.1|AE013995_2 hypothetical protein y3903 [Yersinia pestis KIM 10]
gi|45434845|gb|AAS60406.1| Thioredoxin-like proteins and domains [Yersinia pestis biovar
Microtus str. 91001]
gi|51591345|emb|CAH23011.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|108777746|gb|ABG20265.1| hypothetical protein YPN_3938 [Yersinia pestis Nepal516]
gi|108781246|gb|ABG15304.1| hypothetical protein YPA_3342 [Yersinia pestis Antiqua]
gi|115345949|emb|CAL18813.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145209073|gb|ABP38480.1| hypothetical protein YPDSF_0054 [Yersinia pestis Pestoides F]
gi|149290217|gb|EDM40294.1| predicted gluconate transport associated protein [Yersinia pestis
CA88-4125]
gi|152958780|gb|ABS46241.1| hesB-like domain/nifU-like domain protein [Yersinia
pseudotuberculosis IP 31758]
gi|162354219|gb|ABX88167.1| hesB-like domain/nifU-like domain protein [Yersinia pestis Angola]
gi|165915880|gb|EDR34488.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|165919997|gb|EDR37298.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165990521|gb|EDR42822.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166204234|gb|EDR48714.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166962995|gb|EDR59016.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167051752|gb|EDR63160.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167054527|gb|EDR64335.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169748958|gb|ACA66476.1| IscR-regulated protein YhgI [Yersinia pseudotuberculosis YPIII]
gi|186700289|gb|ACC90918.1| IscR-regulated protein YhgI [Yersinia pseudotuberculosis PB1/+]
gi|229678754|gb|EEO74859.1| predicted gluconate transport associated protein [Yersinia pestis
Nepal516]
gi|229690373|gb|EEO82427.1| predicted gluconate transport associated protein [Yersinia pestis
biovar Orientalis str. India 195]
gi|229696348|gb|EEO86395.1| predicted gluconate transport associated protein [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229706461|gb|EEO92468.1| predicted gluconate transport associated protein [Yersinia pestis
Pestoides A]
gi|262360299|gb|ACY57020.1| hypothetical protein YPD4_0111 [Yersinia pestis D106004]
gi|262364249|gb|ACY60806.1| hypothetical protein YPD8_0116 [Yersinia pestis D182038]
gi|270336653|gb|EFA47430.1| IscR-regulated protein YhgI [Yersinia pestis KIM D27]
gi|294352679|gb|ADE63020.1| hypothetical protein YPZ3_0110 [Yersinia pestis Z176003]
gi|320013262|gb|ADV96833.1| putative DNA uptake protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 191
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLK 169
++ + +++R++ VL +++ P +A GG + +G+ L G C+GC TLK
Sbjct: 101 VDDSAPLMERVEYVLQSQINPQLAGHGGRVTLMEITPEGLAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLQKFPELKGVR 178
>gi|227327615|ref|ZP_03831639.1| putative DNA uptake protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 191
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
++ ++ +++R++ VL +++ P +A GG + D G+ L G C+GC TLK
Sbjct: 101 VDDNAPLMERVEYVLQSQINPQLAGHGGRVTLMEITDDGLAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L P++K +R
Sbjct: 161 EGIEKELLEKFPDLKGVR 178
>gi|213584942|ref|ZP_03366768.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 136
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ L +++ P +A GG + D G L G C+GC TLK
Sbjct: 46 VADDAPLMERVEYALQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLK 105
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +LN F PE+K +R +
Sbjct: 106 EGIEKQLLNEF-PELKGVRDL 125
>gi|308273500|emb|CBX30102.1| Nitrogen fixation protein nifU [uncultured Desulfobacterium sp.]
Length = 275
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ I+E ++ ++PA+ +DGG+I V + +RG C+ C + TLK+ V + L
Sbjct: 203 IKLIEETMEREIKPALKKDGGNIELIDVDGNTVIVELRGTCASCSKSQITLKHYVESKLR 262
Query: 178 HFV 180
V
Sbjct: 263 ELV 265
>gi|289549172|ref|YP_003474160.1| nitrogen-fixing NifU domain protein [Thermocrinis albus DSM 14484]
gi|289182789|gb|ADC90033.1| nitrogen-fixing NifU domain protein [Thermocrinis albus DSM 14484]
Length = 268
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
V+P + GGD+ +D V +S++GAC GC + TL+ + + +VP +K I
Sbjct: 99 VKPYIQSHGGDVELVDVKDDTVIVSLKGACVGCAQSVFTLRQTILEAIQAYVPTIKRI 156
>gi|332141688|ref|YP_004427426.1| Fe/S biogenesis protein NfuA [Alteromonas macleodii str. 'Deep
ecotype']
gi|332143387|ref|YP_004429125.1| Fe/S biogenesis protein NfuA [Alteromonas macleodii str. 'Deep
ecotype']
gi|254767290|sp|B4S1U9|NFUA_ALTMD RecName: Full=Fe/S biogenesis protein nfuA
gi|327551710|gb|AEA98428.1| Fe/S biogenesis protein NfuA [Alteromonas macleodii str. 'Deep
ecotype']
gi|327553409|gb|AEB00128.1| Fe/S biogenesis protein NfuA [Alteromonas macleodii str. 'Deep
ecotype']
Length = 192
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLK 169
+ D+ +++RI ++++ + P +A GG +V DG L G C+GC TLK
Sbjct: 101 VSDDAPLIERINYMIESEINPQLANHGGQVVLTELTDDGYAVLQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 161 DGIEKQMLEQFAGELNGVR 179
>gi|283787951|ref|YP_003367816.1| competence protein [Citrobacter rodentium ICC168]
gi|282951405|emb|CBG91104.1| putative competence protein [Citrobacter rodentium ICC168]
Length = 191
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VADDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQLLNEF-PELKGVR 178
>gi|94502038|ref|ZP_01308544.1| Thioredoxin-like protein [Oceanobacter sp. RED65]
gi|94425845|gb|EAT10847.1| Thioredoxin-like protein [Oceanobacter sp. RED65]
Length = 192
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ DS + ++ +L N + P +A GG++ + + D + L G C GC + TLK
Sbjct: 102 VNDDSPIQDQVNYILYNEINPGLASHGGEVKLVEVTEDNLAILEFGGGCQGCSAVDITLK 161
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L +P++ IR
Sbjct: 162 EGIEKTLLSKLPQLSGIR 179
>gi|17228950|ref|NP_485498.1| nitrogen fixation protein [Nostoc sp. PCC 7120]
gi|128316|sp|P20628|NIFU_ANASP RecName: Full=Nitrogen fixation protein nifU
gi|97707|pir||D34443 nitrogen fixation protein nifU - Anabaena sp
gi|142038|gb|AAA22007.1| nifU [Nostoc sp. PCC 7120]
gi|17130802|dbj|BAB73412.1| nitrogen fixation protein [Nostoc sp. PCC 7120]
Length = 300
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
I++VLD VRP + DGGD+ IV + ++GAC C S++ TLK + + L
Sbjct: 232 IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRL 287
>gi|75910119|ref|YP_324415.1| Fe-S cluster assembly protein NifU [Anabaena variabilis ATCC 29413]
gi|7387938|sp|Q43885|NIFU_ANAAZ RecName: Full=Nitrogen fixation protein nifU
gi|762779|gb|AAA87250.1| NifU gene product [Anabaena azollae]
gi|75703844|gb|ABA23520.1| Fe-S cluster assembly protein NifU [Anabaena variabilis ATCC 29413]
Length = 300
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
I++VLD VRP + DGGD+ IV + ++GAC C S++ TLK + + L
Sbjct: 232 IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRL 287
>gi|213161411|ref|ZP_03347121.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
Length = 131
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ L +++ P +A GG + D G L G C+GC TLK
Sbjct: 41 VADDAPLMERVEYALQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLK 100
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +LN F PE+K +R +
Sbjct: 101 EGIEKQLLNEF-PELKGVRDL 120
>gi|282901488|ref|ZP_06309413.1| Fe-S cluster assembly protein NifU [Cylindrospermopsis raciborskii
CS-505]
gi|281193767|gb|EFA68739.1| Fe-S cluster assembly protein NifU [Cylindrospermopsis raciborskii
CS-505]
Length = 308
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I++VLD VRP + DGGD+ V + ++GAC C S++ TLK + + L V
Sbjct: 240 IQKVLDEEVRPVLIADGGDVELYDIEGNKVKVILKGACGSCSSSTATLKIAIESRLRERV 299
>gi|221194695|ref|ZP_03567752.1| conserved domain protein [Atopobium rimae ATCC 49626]
gi|221185599|gb|EEE17989.1| conserved domain protein [Atopobium rimae ATCC 49626]
Length = 78
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 129 VRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
+R ++ DGGD+ + DG V L M G+C+GCP ++ + G+ IL VP VK ++
Sbjct: 15 IRQSLQADGGDVELIDVNDDGTVTLEMTGSCAGCPLSAYDMSEGIERILVEHVPGVKRVQ 74
>gi|284036029|ref|YP_003385959.1| nitrogen-fixing NifU domain protein [Spirosoma linguale DSM 74]
gi|283815322|gb|ADB37160.1| nitrogen-fixing NifU domain protein [Spirosoma linguale DSM 74]
Length = 88
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
++ ++ +++ LD+ +RP +A DGG++ V + D V L + G+C CP ++ T K G
Sbjct: 6 NNDQLISKVERALDS-MRPYLAADGGNVKVLEITEDKTVRLELVGSCGSCPMSAMTFKGG 64
Query: 172 VANILNHFVPEVKDIRTV 189
+ + VPE+ + V
Sbjct: 65 LEEAILKAVPEITKVEAV 82
>gi|288941129|ref|YP_003443369.1| Fe-S cluster assembly protein NifU [Allochromatium vinosum DSM 180]
gi|288896501|gb|ADC62337.1| Fe-S cluster assembly protein NifU [Allochromatium vinosum DSM 180]
Length = 302
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
++RI+ VLD+ VRP + RD GD+ V++ MRGAC+GC A+ TL+
Sbjct: 218 IRRIEAVLDS-VRPTLQRDHGDVELVDVDGRQVYVKMRGACAGCQMAAVTLE 268
>gi|188535341|ref|YP_001909138.1| putative DNA uptake protein [Erwinia tasmaniensis Et1/99]
gi|259910062|ref|YP_002650418.1| putative DNA uptake protein [Erwinia pyrifoliae Ep1/96]
gi|254767305|sp|B2VJW0|NFUA_ERWT9 RecName: Full=Fe/S biogenesis protein nfuA
gi|188030383|emb|CAO98274.1| putative membrane-bound protein GntY [Erwinia tasmaniensis Et1/99]
gi|224965684|emb|CAX57216.1| putative DNA uptake protein [Erwinia pyrifoliae Ep1/96]
gi|283480162|emb|CAY76078.1| Protein gntY [Erwinia pyrifoliae DSM 12163]
gi|310765661|gb|ADP10611.1| putative DNA uptake protein [Erwinia sp. Ejp617]
Length = 191
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L ++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VSDDAPLIERVEYLLQAQINPQLASHGGKVSLMEITDEGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ + PE+K +R
Sbjct: 161 EGIEKEMLAAFPELKGVR 178
>gi|127511040|ref|YP_001092237.1| putative DNA uptake protein [Shewanella loihica PV-4]
gi|150383448|sp|A3Q930|NFUA_SHELP RecName: Full=Fe/S biogenesis protein nfuA
gi|126636335|gb|ABO21978.1| HesB/YadR/YfhF-family protein [Shewanella loihica PV-4]
Length = 192
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+++D+ + +RI+ V+ + + P +A GG+I+ + GI L G C+GC TLK
Sbjct: 101 VDADAPLKERIEYVIQSEINPQLASHGGNIMLVDIDEAGIAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L+ F E+ +R V
Sbjct: 161 DGIEKQLLDMFPGELTGVRDV 181
>gi|237752011|ref|ZP_04582491.1| predicted protein [Helicobacter winghamensis ATCC BAA-430]
gi|229376578|gb|EEO26669.1| predicted protein [Helicobacter winghamensis ATCC BAA-430]
Length = 326
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 101 KLDDMGSGDFIESDSAVVQRIKEV---LDNRVRPAVARDGGD---IVFKGYRDGI--VFL 152
K D GD ++ +VQ+IK + +D ++RP + DGG+ I K DG V++
Sbjct: 230 KADAQSQGDLKFTEMTMVQKIKAIENTIDEKIRPMLMMDGGNMEIIDLKNGSDGYTDVYI 289
Query: 153 SMRGACSGCPSASETLKYGVANILNH 178
GACSGC S++ + + ++L
Sbjct: 290 RYLGACSGCASSATGTLFAIESVLQE 315
>gi|270264449|ref|ZP_06192715.1| Fe/S biogenesis protein NfuA [Serratia odorifera 4Rx13]
gi|270041585|gb|EFA14683.1| Fe/S biogenesis protein NfuA [Serratia odorifera 4Rx13]
Length = 191
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
++ ++ +++R++ VL +++ P +A GG + D + L G C+GC TLK
Sbjct: 101 VDDNAPLMERVEYVLQSQINPQLAGHGGRVTLMEITDDSLAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLQKFPELKGVR 178
>gi|260774744|ref|ZP_05883647.1| NfuA Fe-S protein maturation [Vibrio coralliilyticus ATCC BAA-450]
gi|260609306|gb|EEX35458.1| NfuA Fe-S protein maturation [Vibrio coralliilyticus ATCC BAA-450]
Length = 195
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +V+R++ V+ +V P +A GG + + + DGI ++ G C+GC TLK
Sbjct: 104 VSDDAPLVERVEYVIQTQVNPQLAGHGGHVNLVEITEDGIAIVAFGGGCNGCSMVDVTLK 163
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 164 EGIEKELLQQFEGELSAVR 182
>gi|257784797|ref|YP_003180014.1| nitrogen-fixing NifU domain-containing protein [Atopobium parvulum
DSM 20469]
gi|257473304|gb|ACV51423.1| nitrogen-fixing NifU domain protein [Atopobium parvulum DSM 20469]
Length = 78
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 129 VRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
+R ++ DGGD+ + DG V L M G+C+GCP ++ + G+ IL VP VK ++
Sbjct: 15 IRQSLQTDGGDVELIDVSDDGTVTLEMVGSCAGCPMSAYDMSEGIERILIEHVPGVKRVQ 74
>gi|157372866|ref|YP_001480855.1| putative DNA uptake protein [Serratia proteamaculans 568]
gi|166990528|sp|A8GKT7|NFUA_SERP5 RecName: Full=Fe/S biogenesis protein nfuA
gi|157324630|gb|ABV43727.1| HesB/YadR/YfhF-family protein [Serratia proteamaculans 568]
Length = 191
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
++ ++ +++R++ VL +++ P +A GG + D + L G C+GC TLK
Sbjct: 101 VDDNAPLMERVEYVLQSQINPQLAGHGGRVTLMEITDDSLAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLQKFPELKGVR 178
>gi|320534511|ref|ZP_08034970.1| NifU-like domain protein [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320133275|gb|EFW25764.1| NifU-like domain protein [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 178
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
D A+ +++ D + + GG +V + RDG+V ++M G+C CP+A T+
Sbjct: 101 DDALEAAARQIADGSLGTFINSHGGALVVQSVRDGVVEIAMEGSCDHCPAAEITMHARFE 160
Query: 174 NILNHFVPEVKDIRTV 189
++L P + ++R V
Sbjct: 161 HLLRRRCPWMVEVRRV 176
>gi|237807285|ref|YP_002891725.1| putative DNA uptake protein [Tolumonas auensis DSM 9187]
gi|259511747|sp|C4LA10|NFUA_TOLAT RecName: Full=Fe/S biogenesis protein nfuA
gi|237499546|gb|ACQ92139.1| IscR-regulated protein YhgI [Tolumonas auensis DSM 9187]
Length = 192
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 15/165 (9%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
HF E + R+F + PG + G + D + E R P G +
Sbjct: 11 HFRKLLEKQAENTNIRVFVMNPGTPNAECGVSYCP--PDAVEPEDSRQPFDGFDAIIDPN 68
Query: 88 GDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVRPAVARDG 137
P + + D D MGS ++ ++++ +R++ VL ++V P++A G
Sbjct: 69 SAPFLEEAAI-DFISDQMGSQLTLKAPNAKMRKVDDNASLAERVEYVLQSQVNPSLAAHG 127
Query: 138 GDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
G + D G+ L G C+GC TLK G+ L P
Sbjct: 128 GRVTLTEITDDGVAILQFGGGCNGCSMVDVTLKEGIEKQLLELFP 172
>gi|255038680|ref|YP_003089301.1| nitrogen-fixing NifU domain-containing protein [Dyadobacter
fermentans DSM 18053]
gi|254951436|gb|ACT96136.1| nitrogen-fixing NifU domain protein [Dyadobacter fermentans DSM
18053]
Length = 85
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLK 169
++S ++ I++ L+ VRP + DGGD+ F D IV L ++G+C CP ++ T +
Sbjct: 1 MDSKEKTIELIEQALET-VRPYLHADGGDVKFVELTDDLIVKLELQGSCQSCPMSAMTFR 59
Query: 170 YGVANILNHFVPEVKDI 186
G+ + VP + +
Sbjct: 60 AGLEESIRKAVPYINKV 76
>gi|218439087|ref|YP_002377416.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7424]
gi|218171815|gb|ACK70548.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7424]
Length = 293
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVF---KGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+Q I++VL+ VRP + DGG++ +G+R +V ++GAC C ++ TLK+ + +
Sbjct: 222 IQLIEQVLEKEVRPILKADGGNVELYDVEGHRIKVV---LKGACGSCAGSTATLKHAIED 278
Query: 175 ILNHFV 180
L +
Sbjct: 279 KLRELI 284
>gi|268326215|emb|CBH39803.1| conserved hypothetical protein, containing NifU-like domain
[uncultured archaeon]
Length = 87
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANI 175
+++ ++ V++ +RP + GG I +G D G+V + + GAC+GCP + TL V
Sbjct: 1 MLEEVEGVIEKDIRPLLEMQGGSIELEGVDDDGVVKVRLTGACAGCPMSQFTLVNFVEAT 60
Query: 176 LNHFVPEVKDI 186
L VP VK +
Sbjct: 61 LKDKVPGVKQV 71
>gi|218438784|ref|YP_002377113.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7424]
gi|218171512|gb|ACK70245.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7424]
Length = 309
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILN 177
+RI++ LD VRP + GD+ V + + G CS CP+++ T+K GV +
Sbjct: 100 KRIQQALDE-VRPGLKSHNGDVELVAIELPDTVKVRLVGTCSNCPASTLTMKQGVEQTIK 158
Query: 178 HFVPEVKDIRTV 189
++ PE+ + ++
Sbjct: 159 NYCPEITQVISI 170
>gi|283835809|ref|ZP_06355550.1| hypothetical protein CIT292_10204 [Citrobacter youngae ATCC 29220]
gi|291067975|gb|EFE06084.1| IscR-regulated protein YhgI [Citrobacter youngae ATCC 29220]
Length = 191
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VADDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITDEGFAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKQLLAEFPELKGVR 178
>gi|291613274|ref|YP_003523431.1| Fe-S cluster assembly protein NifU [Sideroxydans lithotrophicus
ES-1]
gi|291583386|gb|ADE11044.1| Fe-S cluster assembly protein NifU [Sideroxydans lithotrophicus
ES-1]
Length = 296
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++I+ VL++ +RP + RDGGDI ++++M+GACSGC + TL+ I
Sbjct: 215 IRKIETVLES-IRPQLKRDGGDIELVDVDGKTIYVNMKGACSGCQMEALTLQ----GIQQ 269
Query: 178 HFVPEVKD 185
+ E+K+
Sbjct: 270 KLMEELKE 277
>gi|253701253|ref|YP_003022442.1| Fe-S cluster assembly protein NifU [Geobacter sp. M21]
gi|251776103|gb|ACT18684.1| Fe-S cluster assembly protein NifU [Geobacter sp. M21]
Length = 284
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q I+E L+N +RP + DGGD+ V ++ R AC+GC S+ T K+ +
Sbjct: 212 MQLIQETLENEIRPQLWADGGDLELIDIDGANVQVAFRKACAGCASSGNTAKFVEQKLRE 271
Query: 178 HFVPEV 183
P++
Sbjct: 272 MVSPDI 277
>gi|167622188|ref|YP_001672482.1| putative DNA uptake protein [Shewanella halifaxensis HAW-EB4]
gi|189041729|sp|B0TNS0|NFUA_SHEHH RecName: Full=Fe/S biogenesis protein nfuA
gi|167352210|gb|ABZ74823.1| HesB/YadR/YfhF-family protein [Shewanella halifaxensis HAW-EB4]
Length = 192
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+++ +RI+ V+ + + P +A GG+I+ + +GI L G C+GC TLK
Sbjct: 101 VSDDASLSERIEYVIQSEINPQLASHGGNIMLVEITEEGIAVLQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L F E+ ++ V
Sbjct: 161 DGIEKQLLEMFPSELTGVKDV 181
>gi|51701957|sp|Q6LVQ9|NFUA_PHOPR RecName: Full=Fe/S biogenesis protein nfuA
gi|46911818|emb|CAG18616.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 194
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R+ + +V P +A GG++ DG+ L G C+GC TLK
Sbjct: 103 VSDDATLMERVDYAIQTQVNPQLAGHGGNVSLAEITEDGVAILQFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L F E+ +R V
Sbjct: 163 EGIEKELLAQFAGELTGVRDV 183
>gi|16766799|ref|NP_462414.1| DNA uptake protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|62182013|ref|YP_218430.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161616554|ref|YP_001590519.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167549282|ref|ZP_02343041.1| protein GntY [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|167990716|ref|ZP_02571815.1| protein GntY [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168232650|ref|ZP_02657708.1| protein GntY [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|168235106|ref|ZP_02660164.1| protein GntY [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168241653|ref|ZP_02666585.1| protein GntY [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168260762|ref|ZP_02682735.1| protein GntY [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|168465218|ref|ZP_02699110.1| protein GntY [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|168818674|ref|ZP_02830674.1| protein GntY [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194445195|ref|YP_002042763.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194448010|ref|YP_002047536.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194472075|ref|ZP_03078059.1| protein GntY [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194735692|ref|YP_002116454.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197247966|ref|YP_002148435.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197265281|ref|ZP_03165355.1| protein GntY [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|198244988|ref|YP_002217471.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200387996|ref|ZP_03214608.1| protein GntY [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204928851|ref|ZP_03220050.1| protein GntY [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205354865|ref|YP_002228666.1| DNA uptake protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207858751|ref|YP_002245402.1| DNA uptake protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|213426878|ref|ZP_03359628.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|224585306|ref|YP_002639105.1| DNA uptake protein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|238910484|ref|ZP_04654321.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289824843|ref|ZP_06544286.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|51701441|sp|Q8ZLI7|NFUA_SALTY RecName: Full=Fe/S biogenesis protein nfuA
gi|75480222|sp|Q57IW3|NFUA_SALCH RecName: Full=Fe/S biogenesis protein nfuA
gi|189041727|sp|A9MTT1|NFUA_SALPB RecName: Full=Fe/S biogenesis protein nfuA
gi|254767317|sp|B5F8M8|NFUA_SALA4 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767318|sp|B5FKD2|NFUA_SALDC RecName: Full=Fe/S biogenesis protein nfuA
gi|254767319|sp|B5R371|NFUA_SALEP RecName: Full=Fe/S biogenesis protein nfuA
gi|254767320|sp|B5R7K3|NFUA_SALG2 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767321|sp|B4TKT8|NFUA_SALHS RecName: Full=Fe/S biogenesis protein nfuA
gi|254767322|sp|B4SVL5|NFUA_SALNS RecName: Full=Fe/S biogenesis protein nfuA
gi|254767323|sp|C0Q0I7|NFUA_SALPC RecName: Full=Fe/S biogenesis protein nfuA
gi|254767325|sp|B4TY71|NFUA_SALSV RecName: Full=Fe/S biogenesis protein nfuA
gi|16422070|gb|AAL22373.1| putative thioredoxin-like proteins and domain protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|62129646|gb|AAX67349.1| putative Thioredoxin-like proteins and domain [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161365918|gb|ABX69686.1| hypothetical protein SPAB_04370 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403858|gb|ACF64080.1| protein GntY [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194406314|gb|ACF66533.1| protein GntY [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194458439|gb|EDX47278.1| protein GntY [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194711194|gb|ACF90415.1| protein GntY [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195632440|gb|EDX50924.1| protein GntY [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197211669|gb|ACH49066.1| protein GntY [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197243536|gb|EDY26156.1| protein GntY [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197291455|gb|EDY30807.1| protein GntY [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197939504|gb|ACH76837.1| protein GntY [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|199605094|gb|EDZ03639.1| protein GntY [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204322284|gb|EDZ07482.1| protein GntY [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205274646|emb|CAR39700.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205325543|gb|EDZ13382.1| protein GntY [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205330667|gb|EDZ17431.1| protein GntY [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205333139|gb|EDZ19903.1| protein GntY [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205338772|gb|EDZ25536.1| protein GntY [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205344656|gb|EDZ31420.1| protein GntY [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205350434|gb|EDZ37065.1| protein GntY [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|206710554|emb|CAR34912.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224469834|gb|ACN47664.1| hypothetical protein SPC_3581 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261248666|emb|CBG26504.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267995733|gb|ACY90618.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160054|emb|CBW19573.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914535|dbj|BAJ38509.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320087927|emb|CBY97689.1| Fe/S biogenesis protein nfuA [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321226562|gb|EFX51612.1| NfuA Fe-S protein maturation [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322614115|gb|EFY11051.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618007|gb|EFY14900.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625379|gb|EFY22205.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322629844|gb|EFY26617.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322632267|gb|EFY29018.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322636382|gb|EFY33089.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322643238|gb|EFY39807.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322644760|gb|EFY41296.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322651215|gb|EFY47599.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322654917|gb|EFY51232.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322659174|gb|EFY55426.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663125|gb|EFY59329.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322668611|gb|EFY64764.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322674585|gb|EFY70678.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322678209|gb|EFY74270.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682534|gb|EFY78555.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322684247|gb|EFY80253.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322716501|gb|EFZ08072.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323131871|gb|ADX19301.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323192198|gb|EFZ77430.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196376|gb|EFZ81528.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323201823|gb|EFZ86886.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323206365|gb|EFZ91326.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323211958|gb|EFZ96785.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323216864|gb|EGA01587.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222263|gb|EGA06646.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323224278|gb|EGA08567.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323228206|gb|EGA12337.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233527|gb|EGA17620.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323237011|gb|EGA21078.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323243774|gb|EGA27790.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323245984|gb|EGA29971.1| Fe/S biogenesis protein NfuA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323250760|gb|EGA34638.1| Fe/S biogenesis protein NfuA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323255771|gb|EGA39521.1| Fe/S biogenesis protein NfuA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261371|gb|EGA44957.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323267656|gb|EGA51138.1| Fe/S biogenesis protein NfuA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323268536|gb|EGA52003.1| Fe/S biogenesis protein NfuA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326625252|gb|EGE31597.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326630011|gb|EGE36354.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332990363|gb|AEF09346.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 191
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ L +++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VADDAPLMERVEYALQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQLLNEF-PELKGVR 178
>gi|71275227|ref|ZP_00651514.1| Nitrogen-fixing NifU, C-terminal [Xylella fastidiosa Dixon]
gi|71899552|ref|ZP_00681708.1| HesB/YadR/YfhF:Nitrogen-fixing NifU, C-terminal [Xylella fastidiosa
Ann-1]
gi|71899937|ref|ZP_00682084.1| HesB/YadR/YfhF:Nitrogen-fixing NifU, C-terminal [Xylella fastidiosa
Ann-1]
gi|170731222|ref|YP_001776655.1| thioredoxin-like protein [Xylella fastidiosa M12]
gi|254767338|sp|B0U5V3|NFUA_XYLFM RecName: Full=Fe/S biogenesis protein nfuA
gi|71164036|gb|EAO13751.1| Nitrogen-fixing NifU, C-terminal [Xylella fastidiosa Dixon]
gi|71730300|gb|EAO32384.1| HesB/YadR/YfhF:Nitrogen-fixing NifU, C-terminal [Xylella fastidiosa
Ann-1]
gi|71730681|gb|EAO32756.1| HesB/YadR/YfhF:Nitrogen-fixing NifU, C-terminal [Xylella fastidiosa
Ann-1]
gi|167966015|gb|ACA13025.1| thioredoxin-like protein [Xylella fastidiosa M12]
Length = 199
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASE 166
G + +++V+R+ V++N + P +A GG + V + +G+V L G C GC A
Sbjct: 100 GQELSQVASLVERVCWVVENEINPQLASHGGRVEVQEVSAEGVVLLRFGGGCHGCGMADV 159
Query: 167 TLKYGVANILNHFVPEVKDIR 187
TLK GV L V V +R
Sbjct: 160 TLKQGVEKTLMERVHGVIAVR 180
>gi|242310610|ref|ZP_04809765.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239523008|gb|EEQ62874.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 326
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 101 KLDDMGSGDFIESDSAVVQRIKEV---LDNRVRPAVARDGGD---IVFKGYRDG--IVFL 152
K D GD +D +VQ+IK + +D ++RP + DGG+ I K DG V++
Sbjct: 230 KADLESKGDLKFADMTLVQKIKAIESLIDEKIRPMLMMDGGNMEIIELKNSSDGHTDVYI 289
Query: 153 SMRGACSGCPSASETLKYGVANILNH 178
GACSGC S + + + ++L
Sbjct: 290 RYLGACSGCASGATGTLFAIESVLQE 315
>gi|229557969|ref|YP_128418.2| putative DNA uptake protein [Photobacterium profundum SS9]
Length = 192
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R+ + +V P +A GG++ DG+ L G C+GC TLK
Sbjct: 101 VSDDATLMERVDYAIQTQVNPQLAGHGGNVSLAEITEDGVAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L F E+ +R V
Sbjct: 161 EGIEKELLAQFAGELTGVRDV 181
>gi|291326981|ref|ZP_06126542.2| IscR-regulated protein YhgI [Providencia rettgeri DSM 1131]
gi|291312105|gb|EFE52558.1| IscR-regulated protein YhgI [Providencia rettgeri DSM 1131]
Length = 194
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 16/172 (9%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
HF+ E + R+F I PG + G + G + + L+ L ++ +
Sbjct: 13 HFAKLLENQEPGTQIRVFVINPGTPTAECGVSYCPPGAVEATDKELKFEKLSAYVDEISA 72
Query: 88 GDPIIHNGGLGDMKLDDMGSGDFIES----------DSAVVQRIKEVLDNRVRPAVARDG 137
P + + + D D +GS +++ D+ +++R++ VL +++ P +A G
Sbjct: 73 --PFLDDAEI-DFVTDQLGSQLTLKAPNAKMRKVSDDAPLIERVEYVLQSQINPQLASHG 129
Query: 138 GDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGV-ANILNHFVPEVKDIR 187
G + D G L G C+GC TLK G+ +L F E+K ++
Sbjct: 130 GRVSLMEITDEGFAILQFGGGCNGCSMVDVTLKEGIEKELLKMFEGELKGVK 181
>gi|56415426|ref|YP_152501.1| DNA uptake protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197364356|ref|YP_002143993.1| DNA uptake protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|81361710|sp|Q5PLY6|NFUA_SALPA RecName: Full=Fe/S biogenesis protein nfuA
gi|254767324|sp|B5BHG9|NFUA_SALPK RecName: Full=Fe/S biogenesis protein nfuA
gi|56129683|gb|AAV79189.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197095833|emb|CAR61406.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 191
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ L +++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VADDAPLMERVEYALQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQLLNEF-PELKGVR 178
>gi|255024382|ref|ZP_05296368.1| NifU family protein [Listeria monocytogenes FSL J1-208]
Length = 67
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 127 NRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ RP + RDGGD + + +DG+V + + GAC CPS+ TLK G+ L
Sbjct: 14 KKFRPFLVRDGGDYELIEVTQDGVVKIKLLGACETCPSSDMTLKMGIELTLAE 66
>gi|16762776|ref|NP_458393.1| DNA uptake protein [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|29144263|ref|NP_807605.1| DNA uptake protein [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|213023194|ref|ZP_03337641.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213420971|ref|ZP_03354037.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213612531|ref|ZP_03370357.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213647818|ref|ZP_03377871.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|51701440|sp|Q8Z223|NFUA_SALTI RecName: Full=Fe/S biogenesis protein nfuA
gi|25356753|pir||AC0997 conserved hypothetical protein STY4285 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16505082|emb|CAD08103.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139900|gb|AAO71465.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 191
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ L +++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VADDAPLMERVEYALQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQLLNEF-PELKGVR 178
>gi|87121388|ref|ZP_01077277.1| yhgI protein [Marinomonas sp. MED121]
gi|86163231|gb|EAQ64507.1| yhgI protein [Marinomonas sp. MED121]
Length = 193
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLK 169
+ DS + +I VL + + P +A GG++ ++G I L G C GC + TLK
Sbjct: 103 VSEDSPLEDQINYVLYSDINPGLASHGGEVSLVEIKEGNIAVLQFGGGCQGCSAVDLTLK 162
Query: 170 YGVANILNHFVPEVKDIR 187
GV L VP +K ++
Sbjct: 163 EGVEKTLIEKVPALKGVQ 180
>gi|197117955|ref|YP_002138382.1| nitrogen fixation iron-sulfur cluster assembly protein NifU
[Geobacter bemidjiensis Bem]
gi|197087315|gb|ACH38586.1| nitrogen fixation iron-sulfur cluster assembly protein NifU
[Geobacter bemidjiensis Bem]
Length = 284
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q I+E L+N +RP + DGGD+ V ++ R AC+GC S+ T K+ +
Sbjct: 212 MQLIQETLENEIRPQLWADGGDLELIDIDGANVQVAFRKACAGCASSGNTAKFVEQKLRE 271
Query: 178 HFVPEV 183
P++
Sbjct: 272 MVSPDI 277
>gi|1171712|sp|Q00241|NIFU_PLEBO RecName: Full=Nitrogen fixation protein nifU
gi|441182|dbj|BAA00567.1| NifU protein [Leptolyngbya boryana IAM M-101]
gi|228686|prf||1808318C nifU gene
Length = 205
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
I++VLD VRP + DGGD+ V ++++GAC C S++ TLK V
Sbjct: 137 IQKVLDEEVRPVLIADGGDVELYDVDGDFVKVTLKGACGSCASSTATLKDAV 188
>gi|307153502|ref|YP_003888886.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7822]
gi|306983730|gb|ADN15611.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7822]
Length = 297
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q I+ VL+ VRP + DGG++ IV + ++GAC C ++ TLK + L
Sbjct: 226 IQLIERVLEQEVRPILMADGGNVELYDLEGEIVKVVLKGACGSCAGSTATLKIAIEAKLK 285
Query: 178 HFV 180
+
Sbjct: 286 ELI 288
>gi|327400610|ref|YP_004341449.1| nitrogen-fixing NifU domain-containing protein [Archaeoglobus
veneficus SNP6]
gi|327316118|gb|AEA46734.1| nitrogen-fixing NifU domain-containing protein [Archaeoglobus
veneficus SNP6]
Length = 79
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 129 VRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+RPA+ +DGG+I G+V + + GAC GCP + TL V + VPEVK +
Sbjct: 17 IRPALIQDGGNIAVVDVDEESGVVKVQLLGACYGCPLSQVTLAMFVEQRIKQRVPEVKKV 76
>gi|188025400|ref|ZP_02958487.2| hypothetical protein PROSTU_00225 [Providencia stuartii ATCC 25827]
gi|188023649|gb|EDU61689.1| hypothetical protein PROSTU_00225 [Providencia stuartii ATCC 25827]
Length = 194
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ VL +++ P +A GG + + + DG L G C+GC TLK
Sbjct: 103 VSDDAPLIERVEYVLQSQINPQLASHGGRVSLMEITDDGFAILQFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+K ++
Sbjct: 163 EGIEKELLKMFEGELKGVK 181
>gi|220907771|ref|YP_002483082.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7425]
gi|219864382|gb|ACL44721.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7425]
Length = 296
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I++VL VRP + DGGD+ +V + ++GAC C S++ TLK + L V
Sbjct: 225 IQQVLTEEVRPVLMADGGDVELYDVEGDVVKVLLKGACGNCSSSTATLKIAIEARLQERV 284
>gi|238754092|ref|ZP_04615450.1| Fe/S bioproteinsis protein nfuA [Yersinia ruckeri ATCC 29473]
gi|238707588|gb|EEP99947.1| Fe/S bioproteinsis protein nfuA [Yersinia ruckeri ATCC 29473]
Length = 191
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
++ + +++R++ VL +++ P +A GG + D + L G C+GC TLK
Sbjct: 101 VDDSAPLMERVEYVLQSQINPQLAGHGGRVTLMEITDDALAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLQKFPELKGVR 178
>gi|86141694|ref|ZP_01060218.1| nifU protein-like [Leeuwenhoekiella blandensis MED217]
gi|85831257|gb|EAQ49713.1| nifU protein-like [Leeuwenhoekiella blandensis MED217]
Length = 80
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYG 171
+D+ + +++ L+ +RP + DGGDI DG V + + GAC GC TLK G
Sbjct: 2 TDTELKGKVEAALE-EIRPFLQSDGGDIALLSIEDGTTVKVQLEGACVGCSVNQMTLKSG 60
Query: 172 VANILNHFVPEVKDI 186
V + P+++ +
Sbjct: 61 VEMTIKKHAPQIERV 75
>gi|223038428|ref|ZP_03608722.1| NifU family protein [Campylobacter rectus RM3267]
gi|222880285|gb|EEF15372.1| NifU family protein [Campylobacter rectus RM3267]
Length = 146
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+V P + DGG + G ++G +++ + G C GC +++ TLKYG+ L
Sbjct: 75 QKVLPMLENDGGGMELLGIKNGKIYVRLTGHCHGCAASTTTLKYGIERQLR 125
>gi|118464609|ref|YP_881874.1| hypothetical protein MAV_2683 [Mycobacterium avium 104]
gi|118165896|gb|ABK66793.1| conserved hypothetical protein [Mycobacterium avium 104]
Length = 316
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+R+ + LD+ VRP + GGD+ V L++ G+C CPS++ TL+ V + +
Sbjct: 95 RRVADALDS-VRPYLGSHGGDVHLLEIVGDTVRLALDGSCKSCPSSAVTLELTVEDAVRS 153
Query: 179 FVPEVKDIRTV 189
PE+ I V
Sbjct: 154 AAPEISSIEVV 164
>gi|238751155|ref|ZP_04612650.1| Fe/S bioproteinsis protein nfuA [Yersinia rohdei ATCC 43380]
gi|238710633|gb|EEQ02856.1| Fe/S bioproteinsis protein nfuA [Yersinia rohdei ATCC 43380]
Length = 191
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLK 169
++ + +++R++ VL +++ P +A GG + D + L G C+GC TLK
Sbjct: 101 VDDTAPLMERVEYVLQSQINPQLAGHGGRVTLMEITPDALAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLQKFPELKGVR 178
>gi|238897767|ref|YP_002923446.1| Fe/S biogenesis protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|259511743|sp|C4K405|NFUA_HAMD5 RecName: Full=Fe/S biogenesis protein nfuA
gi|229465524|gb|ACQ67298.1| Fe/S biogenesis protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 191
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R+ VL +++ P +A GG + D L G C+GC TLK
Sbjct: 101 VADDAPLIERVDYVLQSQINPQLANHGGRVTLMEITDDAFAVLQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K ++
Sbjct: 161 EGIEKELLQQFPELKGVK 178
>gi|85060303|ref|YP_456005.1| putative DNA uptake protein [Sodalis glossinidius str. 'morsitans']
gi|119370620|sp|Q2NQH5|NFUA_SODGM RecName: Full=Fe/S biogenesis protein nfuA
gi|84780823|dbj|BAE75600.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 191
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIV-FLSMRGACSGCPSASETLK 169
+ ++ +++R++ +L +++ P +A GG + D ++ L G C+GC TLK
Sbjct: 101 VSDEAPLIERVEYLLQSQINPQLAGHGGQVTLMEITDDMLAILQFGGGCNGCSMVDYTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLEKFPELKGVR 178
>gi|332995765|gb|AEF05820.1| Fe/S biogenesis protein NfuA [Alteromonas sp. SN2]
Length = 192
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 13/110 (11%)
Query: 90 PIIHNGGLGDMKLDDMGS----------GDFIESDSAVVQRIKEVLDNRVRPAVARDGGD 139
P +H + D D MGS + D+ + +RI+ +++ + P +A GG
Sbjct: 71 PFLHEAEI-DYVTDQMGSQLTLKAPNAKARKVADDAPLAERIRYMIEAEINPQLASHGGQ 129
Query: 140 IVFKGY-RDGIVFLSMRGACSGCPSASETLKYGV-ANILNHFVPEVKDIR 187
++ DG L G C+GC TLK G+ +L F E+ +R
Sbjct: 130 VMLAELTEDGFAILQFGGGCNGCSMVDVTLKDGIEKQMLEQFAGELNGVR 179
>gi|307108673|gb|EFN56913.1| hypothetical protein CHLNCDRAFT_144603 [Chlorella variabilis]
Length = 149
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD VRP + DGG++ F +V+L + GAC CPS+ T+ G+ L
Sbjct: 23 ENVETVLDE-VRPYLMADGGNVEFVEIDGPVVYLRLAGACGSCPSSLTTMTMGIKRRLME 81
Query: 179 FVP 181
+P
Sbjct: 82 RIP 84
>gi|238786223|ref|ZP_04630170.1| Fe/S bioproteinsis protein nfuA [Yersinia bercovieri ATCC 43970]
gi|238797310|ref|ZP_04640811.1| Fe/S bioproteinsis protein nfuA [Yersinia mollaretii ATCC 43969]
gi|238712864|gb|EEQ04929.1| Fe/S bioproteinsis protein nfuA [Yersinia bercovieri ATCC 43970]
gi|238718947|gb|EEQ10762.1| Fe/S bioproteinsis protein nfuA [Yersinia mollaretii ATCC 43969]
Length = 191
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLK 169
++ + +++R++ VL +++ P +A GG + D + L G C+GC TLK
Sbjct: 101 VDDTAPLMERVEYVLQSQINPQLAGHGGRVTLMEITPDALAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLQKFPELKGVR 178
>gi|109947989|ref|YP_665217.1| nifU-like protein [Helicobacter acinonychis str. Sheeba]
gi|109715210|emb|CAK00218.1| nifU-like protein [Helicobacter acinonychis str. Sheeba]
Length = 326
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIV---FKGYRDGI-VFLSMRGACS 159
SG+ + + +VQ+IK +V+D +RP + DGGD+ K D I V++ GAC
Sbjct: 237 SGELVFREMTMVQKIKAVDKVIDENIRPMLVMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFVPEVKDIRTV 189
GC SA+ + + N L + ++IR +
Sbjct: 297 GCMSATTGTLFAIENALQELLD--RNIRVL 324
>gi|238792866|ref|ZP_04636496.1| Fe/S bioproteinsis protein nfuA [Yersinia intermedia ATCC 29909]
gi|238727720|gb|EEQ19244.1| Fe/S bioproteinsis protein nfuA [Yersinia intermedia ATCC 29909]
Length = 191
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLK 169
++ + +++R++ VL +++ P +A GG + D + L G C+GC TLK
Sbjct: 101 VDDTAPLMERVEYVLQSQINPQLAGHGGRVTLMEITPDALAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLQKFPELKGVR 178
>gi|284008807|emb|CBA75563.1| gluconate metabolism protein (iron-sulphur cluster biosynthesis)
[Arsenophonus nasoniae]
Length = 192
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ V+ +++ P +A GG + + + DG L G C+GC TLK
Sbjct: 101 VADDAPLIERVEYVIQSQINPQLAGHGGRVSLMEITDDGYAILQFGGGCNGCSMVDITLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F E+K ++
Sbjct: 161 EGIEKQLLNMFPDELKGVK 179
>gi|326336739|ref|ZP_08202907.1| NifU family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325691209|gb|EGD33180.1| NifU family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 80
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYGVANI 175
+++R++ L +RP + DGGDI G D IV + + G+C C TL+ GV +
Sbjct: 6 LLKRVETALA-EIRPYLQNDGGDISLVGIEDNKIVKVHLLGSCLNCSVNQMTLRSGVEMM 64
Query: 176 LNHFVPEVKDIRTV 189
+ + PE++ + +V
Sbjct: 65 IKKYAPEIEKVISV 78
>gi|304311311|ref|YP_003810909.1| hypothetical protein HDN1F_16740 [gamma proteobacterium HdN1]
gi|301797044|emb|CBL45257.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 199
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETL 168
I +S+V +RI ++ + + P +A GG + + D + L G+C GC TL
Sbjct: 108 IGENSSVEERINHIIFSEINPQLASHGGSVELQQLIDDDTVAILKFGGSCQGCGMIDVTL 167
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K GV L VPE+K + V
Sbjct: 168 KQGVEKTLLDRVPELKRVTDV 188
>gi|237728733|ref|ZP_04559214.1| Fe/S biogenesis protein nfuA [Citrobacter sp. 30_2]
gi|226909355|gb|EEH95273.1| Fe/S biogenesis protein nfuA [Citrobacter sp. 30_2]
Length = 191
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VADDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKQLLAEFPELKGVR 178
>gi|119509287|ref|ZP_01628437.1| nitrogen fixation protein [Nodularia spumigena CCY9414]
gi|119466129|gb|EAW47016.1| nitrogen fixation protein [Nodularia spumigena CCY9414]
Length = 312
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 118 VQRI---KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
VQRI ++VLD VRP + DGGD+ V + ++GAC C S++ TLK +
Sbjct: 236 VQRIALIQKVLDEEVRPVLIADGGDVELYDVEGDKVKVVLQGACGSCSSSTATLKIAIEA 295
Query: 175 ILNHFVPE 182
L V +
Sbjct: 296 RLQDRVSK 303
>gi|300725234|ref|YP_003714562.1| Fe/S biogenesis protein [Xenorhabdus nematophila ATCC 19061]
gi|297631779|emb|CBJ92498.1| Fe/S biogenesis protein [Xenorhabdus nematophila ATCC 19061]
Length = 191
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
++ D+ ++ R++ VL +++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VDDDAPLIDRVEYVLQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+ ++
Sbjct: 161 EGIEKQLLQVFPELTGVK 178
>gi|297568819|ref|YP_003690163.1| Fe-S cluster assembly protein NifU [Desulfurivibrio alkaliphilus
AHT2]
gi|296924734|gb|ADH85544.1| Fe-S cluster assembly protein NifU [Desulfurivibrio alkaliphilus
AHT2]
Length = 277
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ I+E+ + +RPA+ +DGGDI V +++RGAC C + TLK V L
Sbjct: 205 IKMIEELFEREIRPALRKDGGDIELVDLDGDFVTVALRGACVTCKKSKLTLKEYVEKKLR 264
Query: 178 HFV 180
V
Sbjct: 265 EQV 267
>gi|218702159|ref|YP_002409788.1| putative DNA uptake protein [Escherichia coli IAI39]
gi|254767298|sp|B7NMH9|NFUA_ECO7I RecName: Full=Fe/S biogenesis protein nfuA
gi|218372145|emb|CAR20007.1| putative gluconate transport associated protein [Escherichia coli
IAI39]
Length = 191
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + + + DG L G C+ C TLK
Sbjct: 101 VADDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITEDGYAILQFGGGCNSCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQLLNEF-PELKGVR 178
>gi|72537505|gb|AAZ73682.1| hypothetical protein [Lyngbya majuscula CCAP 1446/4]
Length = 289
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNH 178
RI++ L+ VRP + GD+ + V + + G CS CP+++ TLK GV + +
Sbjct: 99 RIQQALEE-VRPGLKSHSGDVELVAVKLPDTVEVKLVGTCSNCPASTLTLKQGVEQAIKN 157
Query: 179 FVPEVKDIRTV 189
PE++ + +V
Sbjct: 158 HCPEIQHVISV 168
>gi|306821530|ref|ZP_07455130.1| conserved hypothetical protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550424|gb|EFM38415.1| conserved hypothetical protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 103
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV-ANILN 177
Q+++E + + P ++ GDI K ++D IV +++ G CS CP + T + + +L
Sbjct: 10 QKLEEYIKINILPYISSHKGDIKIKSFKDKIVTITLLGNCSKCPLSQITFEDVIRQKLLE 69
Query: 178 HFVPEVKDIR 187
F ++ D+R
Sbjct: 70 EFPNQIDDVR 79
>gi|254429726|ref|ZP_05043433.1| HesB-like domain protein [Alcanivorax sp. DG881]
gi|196195895|gb|EDX90854.1| HesB-like domain protein [Alcanivorax sp. DG881]
Length = 198
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
I D+++ ++I VL + P +A GG + + + D + L G C GC TL+
Sbjct: 107 ISEDASIEEKINYVLYAEINPNLAAHGGSVQLLELTEDNVAVLEFGGGCQGCSVVDVTLR 166
Query: 170 YGVANILNHFVPEVKDIR 187
GV L +PE+ +R
Sbjct: 167 DGVEKTLQERIPELAGVR 184
>gi|90412702|ref|ZP_01220703.1| hypothetical protein P3TCK_22380 [Photobacterium profundum 3TCK]
gi|90326277|gb|EAS42696.1| hypothetical protein P3TCK_22380 [Photobacterium profundum 3TCK]
Length = 192
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R+ + +V P +A GG++ DG+ L G C+GC TLK
Sbjct: 101 VSDDATLMERVDYAIQTQVNPQLAGHGGNVSLAEITEDGVAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L F E+ +R +
Sbjct: 161 EGIEKELLAQFAGELTGVRDI 181
>gi|322418923|ref|YP_004198146.1| Fe-S cluster assembly protein NifU [Geobacter sp. M18]
gi|320125310|gb|ADW12870.1| Fe-S cluster assembly protein NifU [Geobacter sp. M18]
Length = 286
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
+Q I+E L+N +RP + DGGD+ V ++ R AC+GC S+ T K+
Sbjct: 214 MQLIQETLENEIRPQLWADGGDLELIDIDGSNVQVAFRKACAGCASSGNTAKF 266
>gi|16801558|ref|NP_471826.1| hypothetical protein lin2496 [Listeria innocua Clip11262]
gi|16415018|emb|CAC97723.1| lin2496 [Listeria innocua Clip11262]
gi|313617409|gb|EFR89807.1| YutI [Listeria innocua FSL S4-378]
gi|313622571|gb|EFR92972.1| YutI [Listeria innocua FSL J1-023]
Length = 78
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 127 NRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
+ RP + RDGGD + + DGIV + + GAC CPS+ TLK G+ L + K+
Sbjct: 14 KKFRPFLVRDGGDYELVEVTPDGIVKIKLLGACETCPSSDMTLKMGIELTLAEKIIGFKE 73
Query: 186 IRTV 189
+ V
Sbjct: 74 VVQV 77
>gi|317049909|ref|YP_004117557.1| IscR-regulated protein YhgI [Pantoea sp. At-9b]
gi|316951526|gb|ADU71001.1| IscR-regulated protein YhgI [Pantoea sp. At-9b]
Length = 191
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +V+R++ +L ++ P +A GG + + + DG L G C+GC TLK
Sbjct: 101 VSDDAPMVERVEYLLQAQINPQLAGHGGRVSLMEITDDGYAILQFGGGCNGCSMIDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 DGIEKELLAAFPELKGVR 178
>gi|71066466|ref|YP_265193.1| hypothetical protein Psyc_1911 [Psychrobacter arcticus 273-4]
gi|71039451|gb|AAZ19759.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
Length = 227
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GI---VFLSMRGACSGCPSASET 167
+D++V +RI VL + + P++A GGD+ D GI L G C GC + T
Sbjct: 134 ADASVEERINYVLQSEINPSLAAHGGDVQLLELIDEEGIGLTAVLKFGGGCQGCSAVDMT 193
Query: 168 LKYGVANILNHFVPEVKDI 186
L+ GV L +PE+ +
Sbjct: 194 LRQGVEVQLKQQIPELTQV 212
>gi|93007026|ref|YP_581463.1| HesB/YadR/YfhF [Psychrobacter cryohalolentis K5]
gi|92394704|gb|ABE75979.1| HesB/YadR/YfhF [Psychrobacter cryohalolentis K5]
Length = 257
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASET 167
+D++V +RI VL + + P++A GGD+ D L G C GC + T
Sbjct: 164 ADASVEERINYVLQSEINPSLAAHGGDVQLLELIDEEGVGLTAVLKFGGGCQGCSAVDMT 223
Query: 168 LKYGVANILNHFVPEVKDI 186
L+ GV L +PE+ +
Sbjct: 224 LRQGVEVQLKQQIPELTQV 242
>gi|94986710|ref|YP_594643.1| NifU homolog involved in Fe-S cluster formation [Lawsonia
intracellularis PHE/MN1-00]
gi|94730959|emb|CAJ54322.1| NifU homolog involved in Fe-S cluster formation [Lawsonia
intracellularis PHE/MN1-00]
Length = 280
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q+I +LD + P + DGG + +V ++MRG C+GC S TL + IL+
Sbjct: 207 MQKILHLLDEEINPVLKTDGGSVELIDVNGPLVTVAMRGNCTGCKSRQITLSQFIEKILH 266
Query: 178 HFV 180
V
Sbjct: 267 EHV 269
>gi|307132919|ref|YP_003884935.1| Fe-S biogenesis protein [Dickeya dadantii 3937]
gi|306530448|gb|ADN00379.1| Fe-S biogenesis protein [Dickeya dadantii 3937]
Length = 191
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
D+ +++R++ VL +++ P +A GG + + + +G L G C+GC TLK G+
Sbjct: 104 DAPLMERVEYVLQSQINPQLAGHGGRVTLMEITEEGYAILQFGGGCNGCSMVDYTLKEGI 163
Query: 173 ANILNHFVPEVKDIR 187
L PE+ +R
Sbjct: 164 EKELLQKFPELTGVR 178
>gi|116515272|ref|YP_802901.1| GNT I transport systemmembrane-bound protein [Buchnera aphidicola
str. Cc (Cinara cedri)]
gi|122285332|sp|Q056Z1|NFUA_BUCCC RecName: Full=Fe/S biogenesis protein nfuA
gi|116257126|gb|ABJ90808.1| GNT I transport systemmembrane-bound protein [Buchnera aphidicola
str. Cc (Cinara cedri)]
Length = 193
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVA 173
S + IK L ++ P + GG + D G+VFL G C+GC TLK G+
Sbjct: 107 SQLQNSIKNFLTTQINPKLLLHGGSVALYDITDSGVVFLKFSGGCNGCSMIDITLKKGIE 166
Query: 174 NILNHFVPEVKDIRTV 189
L PE+ + V
Sbjct: 167 KKLIKNFPEISSVEDV 182
>gi|28199845|ref|NP_780159.1| hypothetical protein PD1979 [Xylella fastidiosa Temecula1]
gi|182682596|ref|YP_001830756.1| HesB/YadR/YfhF-family protein [Xylella fastidiosa M23]
gi|51702170|sp|Q87A52|NFUA_XYLFT RecName: Full=Fe/S biogenesis protein nfuA
gi|254767337|sp|B2I9W5|NFUA_XYLF2 RecName: Full=Fe/S biogenesis protein nfuA
gi|28057966|gb|AAO29808.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
gi|182632706|gb|ACB93482.1| HesB/YadR/YfhF-family protein [Xylella fastidiosa M23]
gi|307578878|gb|ADN62847.1| HesB/YadR/YfhF-family protein [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 199
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASE 166
G + +++V+R+ V++N + P +A GG + V + +G+V L G C GC A
Sbjct: 100 GQELSQVASLVERVCWVVENEINPQLASHGGRVEVQEVSAEGVVLLRFGGGCHGCGMADV 159
Query: 167 TLKYGVANILNHFVPEVKDIR 187
TLK GV L V V +R
Sbjct: 160 TLKQGVEKTLMDRVHGVIAVR 180
>gi|113972131|ref|YP_735924.1| putative DNA uptake protein [Shewanella sp. MR-4]
gi|117922434|ref|YP_871626.1| putative DNA uptake protein [Shewanella sp. ANA-3]
gi|119370615|sp|Q0HDK0|NFUA_SHESM RecName: Full=Fe/S biogenesis protein nfuA
gi|150383449|sp|A0L2F1|NFUA_SHESA RecName: Full=Fe/S biogenesis protein nfuA
gi|113886815|gb|ABI40867.1| HesB/YadR/YfhF-family protein [Shewanella sp. MR-4]
gi|117614766|gb|ABK50220.1| HesB/YadR/YfhF-family protein [Shewanella sp. ANA-3]
Length = 192
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ SD+ + +R++ V+ + + P +A GG+I+ + ++G+ L G C+GC TLK
Sbjct: 101 VASDAPLAERVEYVIQSEINPQLASHGGNIMLVEITQEGVAVLQFGGGCNGCSQVDITLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L+ F E+ + V
Sbjct: 161 DGIEKQLLDMFPGELSGVSDV 181
>gi|224438068|ref|ZP_03659007.1| NifU-like protein [Helicobacter cinaedi CCUG 18818]
gi|313144512|ref|ZP_07806705.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313129543|gb|EFR47160.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 324
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
Query: 101 KLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIV---FKGYRDGIVFLSM 154
K+ D G GD ++ +VQ++K +V+D +RP + DGGD+ K DG + + +
Sbjct: 229 KVADKG-GDIAFAEMTMVQKVKAIDKVIDANIRPMLMMDGGDMEILDIKDTSDGFIDVYI 287
Query: 155 R--GACSGCPSASETLKYGVANILNH 178
R GACSGC S + Y + ++L
Sbjct: 288 RYLGACSGCASGATGTLYAIESVLQE 313
>gi|89076068|ref|ZP_01162428.1| hypothetical protein SKA34_16610 [Photobacterium sp. SKA34]
gi|89048220|gb|EAR53802.1| hypothetical protein SKA34_16610 [Photobacterium sp. SKA34]
Length = 194
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R+ V+ +V P +A GG + DG+ L G C+GC TLK
Sbjct: 103 VSDDATLMERVDYVIQTQVNPQLAGHGGHVSLSEITEDGVAILQFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L F E+ +R +
Sbjct: 163 EGIEKELLAQFEGELTGVRDI 183
>gi|308188428|ref|YP_003932559.1| Protein gntY [Pantoea vagans C9-1]
gi|308058938|gb|ADO11110.1| Protein gntY [Pantoea vagans C9-1]
Length = 191
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +V+R++ +L ++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VSDDAPMVERVEYLLQAQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMIDVTLK 160
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ L PE+K +R +
Sbjct: 161 DGIEKELLAAFPELKGVRDI 180
>gi|298490557|ref|YP_003720734.1| Fe-S cluster assembly protein NifU ['Nostoc azollae' 0708]
gi|298232475|gb|ADI63611.1| Fe-S cluster assembly protein NifU ['Nostoc azollae' 0708]
Length = 306
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V I++VLD VRP + DGGD+ V + ++GAC C S++ TLK + + L
Sbjct: 233 VALIQKVLDEEVRPVLIADGGDVELYDVEGDKVKVVLQGACGSCSSSTATLKIAIESRL 291
>gi|325105698|ref|YP_004275352.1| nitrogen-fixing NifU domain protein [Pedobacter saltans DSM 12145]
gi|324974546|gb|ADY53530.1| nitrogen-fixing NifU domain protein [Pedobacter saltans DSM 12145]
Length = 89
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ES + ++ LD +RP + DGG++ V + D +V L + GAC CP + TLK
Sbjct: 1 MESRDNLFNEVERALDT-IRPYLVADGGNVSVEEITNDNVVKLKLLGACGSCPMSFMTLK 59
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ + VP + + +
Sbjct: 60 AGIEQAVKKAVPSITAVEAI 79
>gi|291276862|ref|YP_003516634.1| NifU-like protein [Helicobacter mustelae 12198]
gi|290964056|emb|CBG39896.1| nifU protein homolog [Helicobacter mustelae 12198]
Length = 92
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q+ E+ + RP + DGGDI G R V++ ++GAC GC + TLK + L
Sbjct: 9 LQKPVEMSIEKTRPHLLADGGDIAILGIRGPCVYVRLKGACVGCAHSHITLKNAIERQLK 68
>gi|332703499|ref|ZP_08423587.1| nitrogen-fixing NifU domain-containing protein [Desulfovibrio
africanus str. Walvis Bay]
gi|332553648|gb|EGJ50692.1| nitrogen-fixing NifU domain-containing protein [Desulfovibrio
africanus str. Walvis Bay]
Length = 80
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGV 172
D+ + +R+ LD +RP + DGGD+ D G+V + +RGAC C + TLK G+
Sbjct: 5 DTTMRERVLAALDM-IRPVLRADGGDVELVEVTDTGVVKVRLRGACQCCTMSRMTLKNGI 63
Query: 173 ANILNHFVPEVKDIRTV 189
+ +P + + +V
Sbjct: 64 ERTILKEIPGLTSVESV 80
>gi|281356627|ref|ZP_06243118.1| nitrogen-fixing NifU domain protein [Victivallis vadensis ATCC
BAA-548]
gi|281316754|gb|EFB00777.1| nitrogen-fixing NifU domain protein [Victivallis vadensis ATCC
BAA-548]
Length = 76
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++I E L++ +R + DGGD+ V L ++GAC GCP A+ T+K G+ IL
Sbjct: 4 LTKKITERLES-LRVHLQADGGDLEIVAIEGKTVKLKLQGACGGCPHAAMTIKGGLERIL 62
Query: 177 NHFV-PEV 183
+ PE+
Sbjct: 63 REEIDPEI 70
>gi|34540487|ref|NP_904966.1| NifU-like protein [Porphyromonas gingivalis W83]
gi|188994590|ref|YP_001928842.1| hypothetical protein PGN_0726 [Porphyromonas gingivalis ATCC 33277]
gi|34396800|gb|AAQ65865.1| NifU-related protein [Porphyromonas gingivalis W83]
gi|188594270|dbj|BAG33245.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
33277]
Length = 94
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 124 VLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
VL R+ P + GGD+ +D VF+ GAC CP+A ET++ V ++ +
Sbjct: 9 VLRERISPLLRSHGGDLSLSQIKDKTVFVRFSGACRFCPAAHETVEKIVQAMIREY 64
>gi|291619243|ref|YP_003521985.1| YhgI [Pantoea ananatis LMG 20103]
gi|291154273|gb|ADD78857.1| YhgI [Pantoea ananatis LMG 20103]
gi|327395572|dbj|BAK12994.1| thioredoxin-like protein YhgI [Pantoea ananatis AJ13355]
Length = 191
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +V+R++ +L ++ P +A GG + + + DG L G C+GC TLK
Sbjct: 101 VSDDAPMVERVEYLLQAQINPQLAGHGGRVSLMEITDDGFAILQFGGGCNGCSMIDVTLK 160
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ L P++K +R +
Sbjct: 161 DGIEKELLAAFPQLKGVRDI 180
>gi|325285793|ref|YP_004261583.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga lytica
DSM 7489]
gi|324321247|gb|ADY28712.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga lytica
DSM 7489]
Length = 79
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 128 RVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+RP + DGGDI D V + + GAC GC TLK GV + +VP+++++
Sbjct: 16 EIRPFLQSDGGDISLISIDNDTSVKVKLEGACVGCSVNQMTLKSGVEMTIKKYVPQIEEV 75
Query: 187 RTV 189
V
Sbjct: 76 INV 78
>gi|88861082|ref|ZP_01135717.1| hypothetical protein PTD2_16836 [Pseudoalteromonas tunicata D2]
gi|88817010|gb|EAR26830.1| hypothetical protein PTD2_16836 [Pseudoalteromonas tunicata D2]
Length = 191
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
+++ +R++ ++D V P +A GG + + + +DGI L G C+GC TLK G+
Sbjct: 105 ASLAERVQHMIDTEVNPQLANHGGQVSLVEITKDGIAVLQFGGGCNGCSMIDVTLKEGIE 164
Query: 174 NILNHFVPEVKDIRTV 189
+ E+ +R +
Sbjct: 165 KEMIAKFDEITGVRDI 180
>gi|227536025|ref|ZP_03966074.1| NifU family protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227244138|gb|EEI94153.1| NifU family protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 93
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILN 177
+R+++ LD +RP + DGG++ + + +V L + GAC+ C + T K G+ +
Sbjct: 5 ERVEQALDT-IRPYLETDGGNVSLEEITPENVVKLKLTGACASCSMSIMTFKAGLEQAIK 63
Query: 178 HFVPEVKDIRTV 189
VPE+ + +
Sbjct: 64 KAVPEITSVEAL 75
>gi|139438470|ref|ZP_01771986.1| Hypothetical protein COLAER_00976 [Collinsella aerofaciens ATCC
25986]
gi|133776009|gb|EBA39829.1| Hypothetical protein COLAER_00976 [Collinsella aerofaciens ATCC
25986]
Length = 67
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 147 DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+G+V L ++GAC+GCP +S TL G+ IL VP V + V
Sbjct: 9 EGVVKLELQGACAGCPMSSLTLSMGIERILKEHVPGVTRVEQV 51
>gi|268680559|ref|YP_003304990.1| nitrogen-fixing NifU domain protein [Sulfurospirillum deleyianum
DSM 6946]
gi|268618590|gb|ACZ12955.1| nitrogen-fixing NifU domain protein [Sulfurospirillum deleyianum
DSM 6946]
Length = 93
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 11/63 (17%)
Query: 126 DNRVRPAVARDGGDI-----------VFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
D +RPAV + I G + G VF+ ++GAC GCPS+ +TLKYG+
Sbjct: 6 DEELRPAVEKSLEKIKPMLALDGGGLTLLGIKKGRVFVQLQGACQGCPSSGQTLKYGIER 65
Query: 175 ILN 177
L
Sbjct: 66 QLR 68
>gi|325280703|ref|YP_004253245.1| nitrogen-fixing NifU domain-containing protein [Odoribacter
splanchnicus DSM 20712]
gi|324312512|gb|ADY33065.1| nitrogen-fixing NifU domain-containing protein [Odoribacter
splanchnicus DSM 20712]
Length = 103
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
IES S+ +R++E++ RVRP + GGD+ + R V + GAC CP+A T++
Sbjct: 5 IESSSSFEERVREIVLYRVRPHLLEHGGDLSVREIRGRDVGIVFSGACGACPAAQITVEQ 64
Query: 171 GVANILNH 178
V L
Sbjct: 65 VVEKGLRR 72
>gi|71892342|ref|YP_278076.1| membrane-bound protein in GNT I transport system [Candidatus
Blochmannia pennsylvanicus str. BPEN]
gi|123640816|sp|Q492A3|NFUA_BLOPB RecName: Full=Fe/S biogenesis protein nfuA
gi|71796448|gb|AAZ41199.1| membrane-bound protein in GNT I transport system [Candidatus
Blochmannia pennsylvanicus str. BPEN]
Length = 196
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
R++ VL ++ P + GG + + + D + + G C+GC AS T+K G+ L +
Sbjct: 115 RVRNVLQFQINPQLELHGGSVSLIRITEDLLAVIKFYGGCNGCAMASYTIKEGIETTLKN 174
Query: 179 FVPEVKDI 186
PE+K +
Sbjct: 175 LFPELKGV 182
>gi|118602435|ref|YP_903650.1| NifU domain-containing protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|254767316|sp|A1AW72|NFUA_RUTMC RecName: Full=Fe/S biogenesis protein nfuA
gi|118567374|gb|ABL02179.1| nitrogen-fixing NifU domain protein [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
Length = 192
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKY 170
+ D+ + ++IK V+ + P +A GG + + + + V L+ G C GC S TL+
Sbjct: 103 KEDAPLEEKIKYVIAANINPGLASHGGFVELVEITKHMDVILNFGGGCQGCSSVKSTLEQ 162
Query: 171 GVANILNHFVPEVKDIRTV 189
GV L PE+K +R V
Sbjct: 163 GVEAQLKMSFPEIKSVRDV 181
>gi|332970567|gb|EGK09554.1| Fe/S-biogenesis protein NfuA [Psychrobacter sp. 1501(2011)]
Length = 216
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGI---VFLSMRGACSGCPSASET 167
+D++V +RI VL + + P++A GGD+ +G+ L G C GC + T
Sbjct: 123 ADASVEERINYVLQSEINPSLAAHGGDVQLLELIEEEGVGLTAVLKFGGGCQGCSAVDMT 182
Query: 168 LKYGVANILNHFVPEVKDI 186
L+ GV L +PE+ +
Sbjct: 183 LRQGVEVQLKQQIPELTQV 201
>gi|222035115|emb|CAP77860.1| Protein gntY [Escherichia coli LF82]
Length = 191
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ +L +++ P +A GG + + + G L G C+GC TLK
Sbjct: 101 VADDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITEGGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +LN F PE+K +R
Sbjct: 161 EGIEKQLLNEF-PELKGVR 178
>gi|9081905|gb|AAF82636.1|AF167538_3 NifU [Trichodesmium erythraeum IMS101]
Length = 291
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I++VL VRP +A DGGD+ V + ++GAC C + TLK + L V
Sbjct: 223 IQQVLQQEVRPVLAEDGGDVELFDVDGDRVLVKLKGACGSCSNVLVTLKGAIEATLKERV 282
Query: 181 PE 182
E
Sbjct: 283 SE 284
>gi|113477555|ref|YP_723616.1| Fe-S cluster assembly protein NifU [Trichodesmium erythraeum
IMS101]
gi|110168603|gb|ABG53143.1| Fe-S cluster assembly protein NifU [Trichodesmium erythraeum
IMS101]
Length = 291
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I++VL VRP +A DGGD+ V + ++GAC C + TLK + L V
Sbjct: 223 IQQVLQQEVRPVLAEDGGDVELFDVDGDRVLVKLKGACGSCSNVLVTLKGAIEATLKERV 282
Query: 181 PE 182
E
Sbjct: 283 SE 284
>gi|120403360|ref|YP_953189.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium
vanbaalenii PYR-1]
gi|119956178|gb|ABM13183.1| Rieske (2Fe-2S) domain protein [Mycobacterium vanbaalenii PYR-1]
Length = 285
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
VRP + GGD+ D + F+ + GAC+GC AS TL+ V L VP ++ +
Sbjct: 102 VRPQLHSHGGDVTLVRVDDRVAFVRLEGACNGCSMASVTLRELVEAALLQGVPNLEAVEV 161
Query: 189 V 189
V
Sbjct: 162 V 162
>gi|269103899|ref|ZP_06156596.1| hypothetical protein VDA_003326 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163797|gb|EEZ42293.1| hypothetical protein VDA_003326 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 192
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R+ V+ +V P +A GG I + + DGI + G C+GC TLK
Sbjct: 101 VADDAPLMERVDYVIQTQVNPQLAGHGGHISLIEITEDGIAVIQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L F E+ +R V
Sbjct: 161 EGIEKELLAQFEGELNAVRDV 181
>gi|300771723|ref|ZP_07081598.1| NifU family protein [Sphingobacterium spiritivorum ATCC 33861]
gi|300761712|gb|EFK58533.1| NifU family protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 93
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILN 177
+R+++ LD +RP + DGG++ + + +V L + GAC+ C + T K G+ +
Sbjct: 5 ERVEQALDT-IRPYLETDGGNVSLEEITPENVVKLKLTGACASCSMSIMTFKAGLEQAIK 63
Query: 178 HFVPEVKDIRTV 189
VPE+ + +
Sbjct: 64 KAVPEITSVEAL 75
>gi|148653644|ref|YP_001280737.1| HesB/YadR/YfhF-family protein [Psychrobacter sp. PRwf-1]
gi|148572728|gb|ABQ94787.1| HesB/YadR/YfhF-family protein [Psychrobacter sp. PRwf-1]
Length = 216
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGI---VFLSMRGACSGCPSASET 167
+D++V +RI VL + + P++A GGD+ +G+ L G C GC + T
Sbjct: 123 ADASVEERINYVLQSEINPSLAAHGGDVQLLELIEEEGVGLTAVLKFGGGCQGCSAVDMT 182
Query: 168 LKYGVANILNHFVPEVKDI 186
L+ GV L +PE+ +
Sbjct: 183 LRQGVEVQLKQQIPELTQV 201
>gi|119484429|ref|ZP_01619046.1| hypothetical protein L8106_01887 [Lyngbya sp. PCC 8106]
gi|119457903|gb|EAW39026.1| hypothetical protein L8106_01887 [Lyngbya sp. PCC 8106]
Length = 289
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNH 178
RI++ L+ VRP + GD+ + V + + G CS CP+++ TLK GV + +
Sbjct: 99 RIQQALE-EVRPGLKSHSGDVELVAIKLPDTVEVKLVGTCSNCPASTLTLKQGVEQAIKN 157
Query: 179 FVPEVKDIRTV 189
PE+ + +V
Sbjct: 158 HCPEINHVISV 168
>gi|320539835|ref|ZP_08039494.1| putative iron-sulfur cluster scaffold protein [Serratia symbiotica
str. Tucson]
gi|320030021|gb|EFW12041.1| putative iron-sulfur cluster scaffold protein [Serratia symbiotica
str. Tucson]
Length = 191
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
++ ++ +++R++ +L +++ P +A GG + D + L G C+GC TLK
Sbjct: 101 VDDNAPLIERVEYLLQSQINPQLAGHGGRVTLMEITDDNLAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLLKFPELKGVR 178
>gi|251793451|ref|YP_003008180.1| putative DNA uptake protein [Aggregatibacter aphrophilus NJ8700]
gi|247534847|gb|ACS98093.1| IscR-regulated protein YhgI [Aggregatibacter aphrophilus NJ8700]
Length = 194
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ V+ ++ P +A GG I + + DG L G C+GC TLK
Sbjct: 103 VADDAPLIERVEYVIQTQINPQLASHGGKITLLEITDDGYAILQFGGGCNGCSMVDVTLK 162
Query: 170 YGVANILNHFVP-EVKDIRTV 189
GV L P E+K R V
Sbjct: 163 DGVEKQLISLFPNELKGARDV 183
>gi|254507293|ref|ZP_05119429.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus 16]
gi|219549753|gb|EED26742.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus 16]
Length = 195
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +V+R++ V+ +V P +A GG + + + +GI ++ G C+GC TLK
Sbjct: 104 VSDDAPLVERVEYVIQTQVNPQLAGHGGHVNLVEITEEGIAIVAFGGGCNGCSMVDVTLK 163
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 164 EGIEKELLQQFEGELTAVR 182
>gi|118468815|ref|YP_887052.1| iron-sulfur cluster-binding protein, Rieske family protein
[Mycobacterium smegmatis str. MC2 155]
gi|118170102|gb|ABK70998.1| iron-sulfur cluster-binding protein, Rieske family protein,
putative [Mycobacterium smegmatis str. MC2 155]
Length = 307
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
V +RI + LD RVRP + GGD+ V + L G+C CPS++ TL+ +
Sbjct: 99 VHRRIADALD-RVRPYLGSHGGDVRLLDVVPEADGAVARLRFSGSCKSCPSSAATLELAI 157
Query: 173 ANILNHFVPEVKDIRTV 189
++ + PEV I V
Sbjct: 158 SDAVLAAAPEVSSIEVV 174
>gi|85858912|ref|YP_461114.1| iscU protein [Syntrophus aciditrophicus SB]
gi|85722003|gb|ABC76946.1| iscU protein [Syntrophus aciditrophicus SB]
Length = 274
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ I++VL+ +RP++ DGGD+ V ++ RGAC+ C ++ +TLK V L
Sbjct: 201 IRMIEDVLEKEIRPSLKNDGGDVELIDVVGNRVLVATRGACAVCRASQQTLKGFVEFKLR 260
Query: 178 HFV-PEV 183
V PE+
Sbjct: 261 ELVTPEL 267
>gi|229524698|ref|ZP_04414103.1| NfuA Fe-S protein maturation [Vibrio cholerae bv. albensis VL426]
gi|229338279|gb|EEO03296.1| NfuA Fe-S protein maturation [Vibrio cholerae bv. albensis VL426]
Length = 195
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+++++R++ L +V P +A GG + + DG+ + G C+GC TLK
Sbjct: 104 VSDDASLIERVEYALQTQVNPQLAGHGGHVRLISISDDGVALVQFGGGCNGCSMVDVTLK 163
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 164 EGIEKELLAQFAGELTAVR 182
>gi|305666181|ref|YP_003862468.1| Nitrogen-fixing NifU-like protein [Maribacter sp. HTCC2170]
gi|88707679|gb|EAQ99920.1| Nitrogen-fixing NifU-like protein [Maribacter sp. HTCC2170]
Length = 79
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 128 RVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+RP + DGGDI D V + ++GAC GC TLK GV + + P+++++
Sbjct: 16 EIRPFLQSDGGDIELVSIDNDSSVKVKLQGACVGCSVNQMTLKSGVEMTIKKYAPQIEEV 75
>gi|71031895|ref|XP_765589.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352546|gb|EAN33306.1| hypothetical protein TP01_0062 [Theileria parva]
Length = 150
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ +++VLD +RP ++ DGG I D V + G+C GCP S TLK + N L
Sbjct: 73 TKNVEDVLD-LIRPQLSSDGGGISLCKIVDNEVHVKFTGSCVGCPYRSTTLKELIENNLV 131
Query: 178 HFV 180
F+
Sbjct: 132 KFI 134
>gi|4140376|gb|AAD03815.1| NifU [Trichodesmium erythraeum IMS101]
Length = 179
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I++VL VRP +A DGGD+ V + ++GAC C + TLK + L V
Sbjct: 111 IQQVLQQEVRPVLAEDGGDVELFDVDGDRVLVKLKGACGSCSNVLVTLKGAIEATLKERV 170
Query: 181 PE 182
E
Sbjct: 171 SE 172
>gi|297583815|ref|YP_003699595.1| Scaffold protein Nfu/NifU [Bacillus selenitireducens MLS10]
gi|297142272|gb|ADH99029.1| Scaffold protein Nfu/NifU [Bacillus selenitireducens MLS10]
Length = 89
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLV-EGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
++ E TPNP +KF QV+ G+ F +E + + LA + S+ G+ +++ DF+
Sbjct: 5 VRGEPTPNPNAMKFTANQVLFEGSGSASFKKGQETDHA-LAKELLSLDGVDNIFGFQDFV 63
Query: 62 TVGKDQ-YDWEHLRPPV 77
TV K+ +W+ L P +
Sbjct: 64 TVNKEPGAEWDDLLPKI 80
>gi|90581403|ref|ZP_01237198.1| hypothetical protein VAS14_21772 [Vibrio angustum S14]
gi|90437380|gb|EAS62576.1| hypothetical protein VAS14_21772 [Vibrio angustum S14]
Length = 192
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R+ V+ +V P +A GG + DG+ L G C+GC TLK
Sbjct: 101 VSDDAPLMERVDYVIQTQVNPQLAGHGGHVSLSEITEDGVAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L F E+ +R +
Sbjct: 161 EGIEKELLAQFEGELTGVRDI 181
>gi|186680943|ref|YP_001864139.1| Fe-S cluster assembly protein NifU [Nostoc punctiforme PCC 73102]
gi|186463395|gb|ACC79196.1| Fe-S cluster assembly protein NifU [Nostoc punctiforme PCC 73102]
Length = 299
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I++VLD VRP + DGGD+ V + ++GAC C S++ TLK + L V
Sbjct: 231 IQKVLDEEVRPVLIADGGDVELYDVEGDRVKVVLQGACGSCSSSTATLKIAIEARLQDRV 290
Query: 181 PE 182
+
Sbjct: 291 SK 292
>gi|300867915|ref|ZP_07112555.1| Fe-S cluster assembly protein NifU [Oscillatoria sp. PCC 6506]
gi|300334052|emb|CBN57731.1| Fe-S cluster assembly protein NifU [Oscillatoria sp. PCC 6506]
Length = 298
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I++VL+ VRP + DGGD+ IV + ++GAC CPS++ TLK + L
Sbjct: 228 ISLIQKVLE-EVRPLLIADGGDVELYDVEGDIVKVLLKGACGSCPSSTSTLKGLIETTLK 286
Query: 178 HFV 180
V
Sbjct: 287 EKV 289
>gi|157736864|ref|YP_001489547.1| NifU-like protein [Arcobacter butzleri RM4018]
gi|157698718|gb|ABV66878.1| NifU-like protein [Arcobacter butzleri RM4018]
Length = 326
Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 113 SDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI----VFLSMRGACSGCPSAS 165
S+ +VQRIK VLD +RP + DGG++ ++ + +++ G+CSGC S S
Sbjct: 243 SEMTLVQRIKAIDSVLDEDIRPMLVMDGGNMEIIDIKENLPHYDLYIRYLGSCSGCASGS 302
Query: 166 ETLKYGVANILNHFV 180
Y + +IL +
Sbjct: 303 TGTLYAIESILQQKI 317
>gi|325576565|ref|ZP_08147283.1| Fe/S-biogenesis protein NfuA [Haemophilus parainfluenzae ATCC
33392]
gi|325161128|gb|EGC73243.1| Fe/S-biogenesis protein NfuA [Haemophilus parainfluenzae ATCC
33392]
Length = 194
Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ V+ ++ P +A GG I + DG L G C+GC TLK
Sbjct: 103 VADDAPLIERVEYVIQTQINPQLASHGGKITLIEITDDGYAVLQFGGGCNGCSMVDVTLK 162
Query: 170 YGVANILNHFVP-EVKDIRTV 189
GV L P E+K R V
Sbjct: 163 DGVEKQLVSLFPNELKGARDV 183
>gi|157373320|ref|YP_001471920.1| putative DNA uptake protein [Shewanella sediminis HAW-EB3]
gi|189041731|sp|A8FPL9|NFUA_SHESH RecName: Full=Fe/S biogenesis protein nfuA
gi|157315694|gb|ABV34792.1| HesB/YadR/YfhF-family protein [Shewanella sediminis HAW-EB3]
Length = 192
Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ SD+ + +RI V+ + + P +A GG+I+ + +G L G C+GC TLK
Sbjct: 101 VASDAPLSERIDYVIQSEINPQLASHGGNIMLVEVTEEGTAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L F E+ ++ V
Sbjct: 161 DGIETQLLEKFPGELTGVKDV 181
>gi|228475998|ref|ZP_04060706.1| conserved virulence factor C [Staphylococcus hominis SK119]
gi|314936427|ref|ZP_07843774.1| scaffold protein Nfu/NifU N [Staphylococcus hominis subsp.
hominis C80]
gi|228269821|gb|EEK11301.1| conserved virulence factor C [Staphylococcus hominis SK119]
gi|313655046|gb|EFS18791.1| scaffold protein Nfu/NifU N [Staphylococcus hominis subsp.
hominis C80]
Length = 82
Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
EDTPN T+K + + +++A++ + +R+F I G+ SV++ DFI+V K
Sbjct: 7 EDTPNYNTIKINLSEKRKDNQSNTYTSAQDGQ-PDFINRLFDIEGVKSVFYVMDFISVDK 65
Query: 66 DQY-DWEHLRPPV 77
++Y +W+ L P +
Sbjct: 66 EEYANWDDLVPKI 78
>gi|21674600|ref|NP_662665.1| NifU protein, putative [Chlorobium tepidum TLS]
gi|21647799|gb|AAM73007.1| nifU protein, putative [Chlorobium tepidum TLS]
Length = 83
Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASET 167
D++ + ++ L+ VRP + DGGD G +D +V + + GAC CP ++ T
Sbjct: 3 DYLPKTDPLYDKVISALET-VRPYLQVDGGDCQLVGITKDMVVDVKLLGACGSCPMSTLT 61
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
L+ GV + PE+ + +V
Sbjct: 62 LRAGVEQAIKKANPEIVRVESV 83
>gi|315636035|ref|ZP_07891294.1| NifU family protein [Arcobacter butzleri JV22]
gi|315479691|gb|EFU70365.1| NifU family protein [Arcobacter butzleri JV22]
Length = 326
Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 113 SDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI----VFLSMRGACSGCPSAS 165
S+ +VQRIK VLD +RP + DGG++ ++ + +++ G+CSGC S S
Sbjct: 243 SEMTLVQRIKAIDSVLDEDIRPMLVMDGGNMEIIDIKENLPHYDLYIRYLGSCSGCASGS 302
Query: 166 ETLKYGVANILNHFV 180
Y + +IL +
Sbjct: 303 TGTLYAIESILQQKI 317
>gi|78358118|ref|YP_389567.1| Fe-S cluster assembly protein NifU [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78220523|gb|ABB39872.1| Fe-S cluster assembly protein NifU [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 280
Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 118 VQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
VQR++ + L+ +RP++ +DGGDI V +++RG C+ CPS+ TL V
Sbjct: 205 VQRMQLVVKTLEEDIRPSLQKDGGDIELVDIDGKEVKVALRGMCTHCPSSQLTLTNFVQR 264
Query: 175 IL-NHFVPEV 183
L H P++
Sbjct: 265 TLREHVEPDI 274
>gi|149193836|ref|ZP_01870934.1| NifU family protein [Caminibacter mediatlanticus TB-2]
gi|149135789|gb|EDM24267.1| NifU family protein [Caminibacter mediatlanticus TB-2]
Length = 321
Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDG----IVFLSMRGACSGCPSASETLKYGVA 173
++ I+E LD +++P +A DGG + R+G VF+ GACS C S TL
Sbjct: 246 IKAIEEFLDTKIKPMLAMDGGSLELIDIREGDGVTTVFVRYLGACSTCASGDMTLMAIEE 305
Query: 174 NILNHF 179
+ HF
Sbjct: 306 EMKKHF 311
>gi|315304549|ref|ZP_07874802.1| nitrogen fixation protein NifU [Listeria ivanovii FSL F6-596]
gi|313627083|gb|EFR95963.1| nitrogen fixation protein NifU [Listeria ivanovii FSL F6-596]
Length = 78
Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 127 NRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
+ RP + RDGGD + + DG V + + GAC CPS+ TLK G+ L+ + K+
Sbjct: 14 KKFRPFLVRDGGDYELVEVTPDGTVKIKLLGACETCPSSDMTLKMGIELTLSEKIIGFKE 73
Query: 186 IRTV 189
+ V
Sbjct: 74 VVQV 77
>gi|163787250|ref|ZP_02181697.1| NifU-like protein [Flavobacteriales bacterium ALC-1]
gi|159877138|gb|EDP71195.1| NifU-like protein [Flavobacteriales bacterium ALC-1]
Length = 79
Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+++ LD +RP + DGGDI D V + + GAC+ C TLK GV + +
Sbjct: 10 VEKALD-EIRPFLQSDGGDIALLSIEDDKFVKVQLEGACTSCSVNQMTLKSGVEMTIKKY 68
Query: 180 VPEVKDIRTV 189
P+++ + V
Sbjct: 69 APQIEKVINV 78
>gi|110834051|ref|YP_692910.1| hypothetical protein ABO_1190 [Alcanivorax borkumensis SK2]
gi|110647162|emb|CAL16638.1| yhgI conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 198
Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
I D+ + ++I VL + P +A GG + + + D + L G C GC TL+
Sbjct: 107 ISEDATIEEKINYVLYAEINPNLAAHGGSVQLLELTDDNVAVLEFGGGCQGCSVVDVTLR 166
Query: 170 YGVANILNHFVPEVKDIR 187
GV L +PE+ +R
Sbjct: 167 DGVEKTLQERIPELAGVR 184
>gi|262375821|ref|ZP_06069053.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262309424|gb|EEY90555.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
Length = 212
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D++V +RI VL + + P +A GG+ ++ L G C GC + TL
Sbjct: 120 DASVEERITYVLQSEINPGLAGHGGNCALVEVKEDPEKGLTAVLKFGGGCQGCSAIDITL 179
Query: 169 KYGVANILNHFVPEV 183
K GV L VPE+
Sbjct: 180 KQGVETTLKQHVPEL 194
>gi|315586217|gb|ADU40598.1| NifU family protein [Helicobacter pylori 35A]
Length = 326
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 103 DDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIV---FKGYRDGI-VFLSMR 155
D SG+ + +VQ+IK +V+D +RP + DGGD+ K D I V++
Sbjct: 233 DKSQSGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDDYIDVYIRYM 292
Query: 156 GACSGCPSASETLKYGVANILNHFV 180
GAC GC SA+ + + N L +
Sbjct: 293 GACDGCMSATTGTLFAIENALQELL 317
>gi|261837669|gb|ACX97435.1| NifU scaffold protein [Helicobacter pylori 51]
Length = 326
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 103 DDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIV---FKGYRDGI-VFLSMR 155
D SG+ + +VQ+IK +V+D +RP + DGGD+ K D I V++
Sbjct: 233 DKSQSGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDDYIDVYIRYM 292
Query: 156 GACSGCPSASETLKYGVANILNHFV 180
GAC GC SA+ + + N L +
Sbjct: 293 GACDGCMSATTGTLFAIENALQELL 317
>gi|50084252|ref|YP_045762.1| putative membrane-bound protein in GNT I transport system (GntY)
[Acinetobacter sp. ADP1]
gi|51701945|sp|Q6FDB8|NFUA_ACIAD RecName: Full=Fe/S biogenesis protein nfuA
gi|49530228|emb|CAG67940.1| putative membrane-bound protein in GNT I transport system (GntY)
[Acinetobacter sp. ADP1]
Length = 212
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI +L + + P +A GG+ +D L G C GC + TL
Sbjct: 120 DASIEERITYILQSEINPGLAGHGGNCALVEVQDDPENGLTAVLKFGGGCQGCSAIDVTL 179
Query: 169 KYGVANILNHFVPEVKDI 186
K GV L +PE++ +
Sbjct: 180 KQGVETTLRQQIPELQRV 197
>gi|301058680|ref|ZP_07199681.1| Fe-S cluster assembly protein NifU [delta proteobacterium NaphS2]
gi|300447244|gb|EFK11008.1| Fe-S cluster assembly protein NifU [delta proteobacterium NaphS2]
Length = 274
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
S+ +++I+E + N + P++ +DGG++ V + M+G+C+ C ++ +TLK V
Sbjct: 196 SNMQKIKKIEETIANEISPSLKQDGGNVELVDVVGNRVLVKMQGSCAVCKASQQTLKNFV 255
Query: 173 ANILNHFV 180
L V
Sbjct: 256 EAKLREMV 263
>gi|323497032|ref|ZP_08102055.1| Fe/S biogenesis protein NfuA [Vibrio sinaloensis DSM 21326]
gi|323317876|gb|EGA70864.1| Fe/S biogenesis protein NfuA [Vibrio sinaloensis DSM 21326]
Length = 195
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 26/177 (14%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDF-----ITVGKDQYDWEHLRPPVLGMIM 82
HF+N + R+F + PG + G + I + +EH V + +
Sbjct: 14 HFANLLSQQPEGTNIRVFVVNPGTQNAECGVSYCPPEAIESTDTELTYEHFSAYVDELSL 73
Query: 83 EHFISGDPIIHNGGLGDMKLDDMGSGDFIES----------DSAVVQRIKEVLDNRVRPA 132
P + + + D D MGS +++ D+ +++R++ V+ +V P
Sbjct: 74 -------PFLEDAEI-DFVTDKMGSQLTLKAPNAKMRKVSDDAPLLERVEYVIQTQVNPQ 125
Query: 133 VARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGV-ANILNHFVPEVKDIR 187
+A GG + + + G+ +S G C+GC TLK G+ +L F E+ +R
Sbjct: 126 LAGHGGHVNLVEITEQGVAIVSFGGGCNGCSMVDVTLKEGIEKELLQQFEGELTAVR 182
>gi|330447159|ref|ZP_08310809.1| iron-sulfur cluster scaffold protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491350|dbj|GAA05306.1| iron-sulfur cluster scaffold protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 192
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R+ V+ +V P +A GG + DG+ L G C+GC TLK
Sbjct: 101 VADDAPLMERVDYVIQTQVNPQLAGHGGHVSLSEITEDGVAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L F E+ +R +
Sbjct: 161 EGIEKELLAQFEGELTGVRDI 181
>gi|308807973|ref|XP_003081297.1| nitrogen fixation NifU-like family protein (ISS) [Ostreococcus
tauri]
gi|116059759|emb|CAL55466.1| nitrogen fixation NifU-like family protein (ISS) [Ostreococcus
tauri]
Length = 186
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 109 DFIES-DSAVVQRIKEVLD---NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSA 164
D +ES D+ ++ E +D + VRP + DGG++ DG++ + + GAC C S+
Sbjct: 26 DAVESADAPTLELTMENVDAALDEVRPYLIADGGNVELVTIDDGMIVVRLNGACGTCASS 85
Query: 165 SETLKYGVANILNH 178
+ T+K G+ +L
Sbjct: 86 TATMKGGIEKLLKQ 99
>gi|145350853|ref|XP_001419810.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580042|gb|ABO98103.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 73
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ + E LD VRP + DGG++ I+ + + GAC C S+S T+K G+ +L
Sbjct: 2 MENVDEALD-EVRPYLVADGGNVELVKIEGKIIVVRLNGACGTCASSSATMKGGIEKLLK 60
Query: 178 H----FVPEVKDI 186
V EV D+
Sbjct: 61 QKFGDAVEEVVDV 73
>gi|116753461|ref|YP_842579.1| NifU domain-containing protein [Methanosaeta thermophila PT]
gi|116664912|gb|ABK13939.1| nitrogen-fixing NifU domain protein [Methanosaeta thermophila PT]
Length = 75
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 118 VQRIKEVLDN---RVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+Q +KE +++ +R + +GGD+ DG+V++ + G+C+GCP + TL+ V
Sbjct: 1 MQSMKEEVESTLESIRNVLRIEGGDVELVDINDGVVYVKLTGSCAGCPFSQMTLRNFVER 60
Query: 175 ILNHFVPEVKDIRTV 189
L V VK + +V
Sbjct: 61 ELKKNVSGVKAVESV 75
>gi|317153414|ref|YP_004121462.1| Fe-S cluster assembly protein NifU [Desulfovibrio aespoeensis
Aspo-2]
gi|316943665|gb|ADU62716.1| Fe-S cluster assembly protein NifU [Desulfovibrio aespoeensis
Aspo-2]
Length = 283
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 118 VQR---IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+QR I+ V+DN +RP + DGGDI V + G CS CPS+ TL+ +
Sbjct: 209 IQRMHLIESVIDNEIRPMLQADGGDIRLVDIDRQTVVVKFIGMCSNCPSSHLTLQNVIEA 268
Query: 175 ILNHFV-PEVK 184
L V PE++
Sbjct: 269 KLKEKVDPEIR 279
>gi|120434494|ref|YP_956868.1| NifU-like/thioredoxin-like protein [Gramella forsetii KT0803]
gi|117576644|emb|CAL65113.1| protein containing NifU-like domain / thioredoxin-like protein
[Gramella forsetii KT0803]
Length = 80
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 129 VRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+RP + DGG+I D +V + + GAC GC TLK GV + +VP+++ +
Sbjct: 17 IRPFLESDGGNISLVSIEDDRLVKVQLEGACVGCTVNQMTLKSGVEMTIKKYVPQIEKV 75
>gi|301155452|emb|CBW14918.1| predicted gluconate transport associated protein [Haemophilus
parainfluenzae T3T1]
Length = 194
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ V+ ++ P +A GG I + DG L G C+GC TLK
Sbjct: 103 VADDAPLIERVEYVIQTQINPQLASHGGKITLIEITDDGYAVLQFGGGCNGCSMVDVTLK 162
Query: 170 YGVANILNHFVP-EVKDIRTV 189
GV L P E+K R V
Sbjct: 163 DGVEKQLVALFPNELKGARDV 183
>gi|268680769|ref|YP_003305200.1| nitrogen-fixing NifU domain protein [Sulfurospirillum deleyianum
DSM 6946]
gi|268618800|gb|ACZ13165.1| nitrogen-fixing NifU domain protein [Sulfurospirillum deleyianum
DSM 6946]
Length = 329
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETLKYGVA 173
Q+I+ V+D +RP + DGG++ ++G V++ GACSGC S+S + +
Sbjct: 254 QQIEAVIDENIRPMLVMDGGNLEILDIKEGDDKVTDVYIRYLGACSGCASSSTGTLFAIE 313
Query: 174 NILNHFVPEVKDIR 187
++L + K+IR
Sbjct: 314 SVLQEKLS--KNIR 325
>gi|329945551|ref|ZP_08293288.1| NifU-like protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328528731|gb|EGF55683.1| NifU-like protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 170
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 137 GGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
GG +V + RDG+V ++M GAC CP+A T+ ++L P + ++R +
Sbjct: 116 GGALVVRSVRDGVVEVAMEGACDECPAAEITMHARFEHLLRRRCPWLVEVRRI 168
>gi|147674569|ref|YP_001218208.1| putative DNA uptake protein [Vibrio cholerae O395]
gi|262170037|ref|ZP_06037726.1| NfuA Fe-S protein maturation [Vibrio cholerae RC27]
gi|172047529|sp|A5F4R9|NFUA_VIBC3 RecName: Full=Fe/S biogenesis protein nfuA
gi|146316452|gb|ABQ20991.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227014606|gb|ACP10816.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|262021445|gb|EEY40157.1| NfuA Fe-S protein maturation [Vibrio cholerae RC27]
Length = 195
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+++++R++ L +V P +A GG + + DG+ + G C+GC TLK
Sbjct: 104 VSDDASLMERVEYALQTQVNPQLAGHGGHVRLISISDDGVALVQFGGGCNGCSMVDVTLK 163
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 164 EGIEKELLAQFAGELTAVR 182
>gi|332673064|gb|AEE69881.1| NifU family protein [Helicobacter pylori 83]
Length = 326
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 103 DDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIV---FKGYRDGI-VFLSMR 155
D SG+ + +VQ+IK +V+D +RP + DGGD+ K D I V++
Sbjct: 233 DKSQSGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDDYIDVYIRYM 292
Query: 156 GACSGCPSASETLKYGVANILNHFV 180
GAC GC SA+ + + N L +
Sbjct: 293 GACDGCMSATTGTLFAIENALQELL 317
>gi|157164931|ref|YP_001466051.1| acetolactate synthase small subunit [Campylobacter concisus 13826]
gi|112801226|gb|EAT98570.1| NifU family protein [Campylobacter concisus 13826]
Length = 330
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 65 KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEV 124
KD Y + LR M E + N L D+ + M + ++ I+ +
Sbjct: 208 KDYYLVDILRDTRAEMEQERLEAQANAQANNTLSDVSFESM-------TMVGQLKAIESI 260
Query: 125 LDNRVRPAVARDGGDIVFKGYRDGI-----VFLSMRGACSGCPSASETLKYGVANILNH- 178
+D +RP + DGG++ R+ V++ GACSGC S S Y + N+L
Sbjct: 261 IDKEIRPMLMMDGGNLEILDIRNDNGENIDVYIRYLGACSGCSSGSTGTLYAIENVLQES 320
Query: 179 FVPEVK 184
P+++
Sbjct: 321 LSPKIR 326
>gi|323494586|ref|ZP_08099690.1| Fe/S biogenesis protein NfuA [Vibrio brasiliensis LMG 20546]
gi|323311189|gb|EGA64349.1| Fe/S biogenesis protein NfuA [Vibrio brasiliensis LMG 20546]
Length = 195
Score = 43.1 bits (100), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +V+R++ V+ +V P +A GG + + + +G+ ++ G C+GC TLK
Sbjct: 104 VSDDAPLVERVEYVIQTQVNPQLAGHGGHVNLVEITEEGVAIVAFGGGCNGCSMVDVTLK 163
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 164 EGIEKELLQQFEGELSAVR 182
>gi|169796823|ref|YP_001714616.1| putative membrane-bound protein in GNT I transport system (GntY)
[Acinetobacter baumannii AYE]
gi|184157261|ref|YP_001845600.1| thioredoxin-like protein [Acinetobacter baumannii ACICU]
gi|213156785|ref|YP_002318446.1| IscR-regulated protein YhgI [Acinetobacter baumannii AB0057]
gi|215484301|ref|YP_002326528.1| Iron-sulphur cluster biosynthesis family protein [Acinetobacter
baumannii AB307-0294]
gi|239502990|ref|ZP_04662300.1| Iron-sulphur cluster biosynthesis family protein [Acinetobacter
baumannii AB900]
gi|260555913|ref|ZP_05828133.1| iron-sulphur cluster biosynthesis family protein [Acinetobacter
baumannii ATCC 19606]
gi|301346712|ref|ZP_07227453.1| Iron-sulphur cluster biosynthesis family protein [Acinetobacter
baumannii AB056]
gi|301511819|ref|ZP_07237056.1| Iron-sulphur cluster biosynthesis family protein [Acinetobacter
baumannii AB058]
gi|301594411|ref|ZP_07239419.1| Iron-sulphur cluster biosynthesis family protein [Acinetobacter
baumannii AB059]
gi|332853697|ref|ZP_08434927.1| IscR-regulated protein YhgI [Acinetobacter baumannii 6013150]
gi|332870876|ref|ZP_08439521.1| IscR-regulated protein YhgI [Acinetobacter baumannii 6013113]
gi|332872882|ref|ZP_08440846.1| IscR-regulated protein YhgI [Acinetobacter baumannii 6014059]
gi|254767282|sp|B7GXX8|NFUA_ACIB3 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767283|sp|B7I8Q3|NFUA_ACIB5 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767284|sp|B2HVD2|NFUA_ACIBC RecName: Full=Fe/S biogenesis protein nfuA
gi|254767286|sp|B0V9L0|NFUA_ACIBY RecName: Full=Fe/S biogenesis protein nfuA
gi|254767504|sp|A3M3B7|NFUA_ACIBT RecName: Full=Fe/S biogenesis protein nfuA
gi|169149750|emb|CAM87641.1| putative membrane-bound protein in GNT I transport system (GntY)
[Acinetobacter baumannii AYE]
gi|183208855|gb|ACC56253.1| Thioredoxin-like protein [Acinetobacter baumannii ACICU]
gi|193076708|gb|ABO11411.2| putative membrane-bound protein in GNT I transport system (GntY)
[Acinetobacter baumannii ATCC 17978]
gi|213055945|gb|ACJ40847.1| IscR-regulated protein YhgI [Acinetobacter baumannii AB0057]
gi|213988281|gb|ACJ58580.1| Iron-sulphur cluster biosynthesis family protein [Acinetobacter
baumannii AB307-0294]
gi|260410824|gb|EEX04122.1| iron-sulphur cluster biosynthesis family protein [Acinetobacter
baumannii ATCC 19606]
gi|322507146|gb|ADX02600.1| thioredoxin-like protein [Acinetobacter baumannii 1656-2]
gi|323517125|gb|ADX91506.1| thioredoxin-like protein [Acinetobacter baumannii TCDC-AB0715]
gi|332728521|gb|EGJ59895.1| IscR-regulated protein YhgI [Acinetobacter baumannii 6013150]
gi|332731977|gb|EGJ63255.1| IscR-regulated protein YhgI [Acinetobacter baumannii 6013113]
gi|332738893|gb|EGJ69756.1| IscR-regulated protein YhgI [Acinetobacter baumannii 6014059]
Length = 212
Score = 43.1 bits (100), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI VL + P +A GG+ +D L G C GC + TL
Sbjct: 120 DASIEERITYVLQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLKFGGGCQGCSAIDVTL 179
Query: 169 KYGVANILNHFVPEVKDI 186
K GV L +PE++ +
Sbjct: 180 KQGVETTLKEHIPELQRV 197
>gi|262368793|ref|ZP_06062122.1| IscR-regulated protein YhgI [Acinetobacter johnsonii SH046]
gi|262316471|gb|EEY97509.1| IscR-regulated protein YhgI [Acinetobacter johnsonii SH046]
Length = 215
Score = 43.1 bits (100), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGIV-FLSMRGACSGCPSASETL 168
D+++ +RI +L + + P +A GG+ V + G+ L G C GC + TL
Sbjct: 123 DASIEERITYILQSEINPGLAGHGGNCALVEVVEDEEHGLTAVLKFGGGCQGCSAIDVTL 182
Query: 169 KYGVANILNHFVPEVKDI 186
K GV L +PE++ +
Sbjct: 183 KQGVETTLQQHIPELRRV 200
>gi|15642714|ref|NP_232347.1| putative DNA uptake protein [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121586599|ref|ZP_01676384.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121726724|ref|ZP_01679949.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|153212573|ref|ZP_01948320.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|153802209|ref|ZP_01956795.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|153817452|ref|ZP_01970119.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153821287|ref|ZP_01973954.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|153825505|ref|ZP_01978172.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|153828374|ref|ZP_01981041.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|227082834|ref|YP_002811385.1| hypothetical protein VCM66_2640 [Vibrio cholerae M66-2]
gi|229507232|ref|ZP_04396737.1| NfuA Fe-S protein maturation [Vibrio cholerae BX 330286]
gi|229509847|ref|ZP_04399328.1| NfuA Fe-S protein maturation [Vibrio cholerae B33]
gi|229513648|ref|ZP_04403112.1| NfuA Fe-S protein maturation [Vibrio cholerae TMA 21]
gi|229516968|ref|ZP_04406414.1| NfuA Fe-S protein maturation [Vibrio cholerae RC9]
gi|229521794|ref|ZP_04411212.1| NfuA Fe-S protein maturation [Vibrio cholerae TM 11079-80]
gi|229527354|ref|ZP_04416746.1| NfuA Fe-S protein maturation [Vibrio cholerae 12129(1)]
gi|229606738|ref|YP_002877386.1| DNA uptake protein [Vibrio cholerae MJ-1236]
gi|254225442|ref|ZP_04919053.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|254285915|ref|ZP_04960877.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|254851257|ref|ZP_05240607.1| DNA uptake protein [Vibrio cholerae MO10]
gi|255744321|ref|ZP_05418273.1| protein gntY [Vibrio cholera CIRS 101]
gi|261211283|ref|ZP_05925572.1| protein gntY [Vibrio sp. RC341]
gi|262158569|ref|ZP_06029684.1| protein gntY [Vibrio cholerae INDRE 91/1]
gi|262190721|ref|ZP_06048951.1| protein gntY [Vibrio cholerae CT 5369-93]
gi|297581560|ref|ZP_06943483.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|298500465|ref|ZP_07010269.1| IscR-regulated protein YhgI [Vibrio cholerae MAK 757]
gi|51702195|sp|Q9KNL2|NFUA_VIBCH RecName: Full=Fe/S biogenesis protein nfuA
gi|254767333|sp|C3LSE7|NFUA_VIBCM RecName: Full=Fe/S biogenesis protein nfuA
gi|9657318|gb|AAF95860.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549158|gb|EAX59191.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121630885|gb|EAX63267.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|124116444|gb|EAY35264.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124122283|gb|EAY41026.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|125622076|gb|EAZ50399.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|126512038|gb|EAZ74632.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126521219|gb|EAZ78442.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|148876204|gb|EDL74339.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|149740790|gb|EDM54881.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|150424097|gb|EDN16036.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|227010722|gb|ACP06934.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|229334986|gb|EEO00471.1| NfuA Fe-S protein maturation [Vibrio cholerae 12129(1)]
gi|229341388|gb|EEO06392.1| NfuA Fe-S protein maturation [Vibrio cholerae TM 11079-80]
gi|229346031|gb|EEO11003.1| NfuA Fe-S protein maturation [Vibrio cholerae RC9]
gi|229349525|gb|EEO14481.1| NfuA Fe-S protein maturation [Vibrio cholerae TMA 21]
gi|229353321|gb|EEO18260.1| NfuA Fe-S protein maturation [Vibrio cholerae B33]
gi|229354737|gb|EEO19658.1| NfuA Fe-S protein maturation [Vibrio cholerae BX 330286]
gi|229369393|gb|ACQ59816.1| NfuA Fe-S protein maturation [Vibrio cholerae MJ-1236]
gi|254846962|gb|EET25376.1| DNA uptake protein [Vibrio cholerae MO10]
gi|255737846|gb|EET93239.1| protein gntY [Vibrio cholera CIRS 101]
gi|260839784|gb|EEX66395.1| protein gntY [Vibrio sp. RC341]
gi|262029730|gb|EEY48379.1| protein gntY [Vibrio cholerae INDRE 91/1]
gi|262033398|gb|EEY51906.1| protein gntY [Vibrio cholerae CT 5369-93]
gi|297534398|gb|EFH73236.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297540634|gb|EFH76691.1| IscR-regulated protein YhgI [Vibrio cholerae MAK 757]
Length = 195
Score = 43.1 bits (100), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+++++R++ L +V P +A GG + + DG+ + G C+GC TLK
Sbjct: 104 VSDDASLMERVEYALQTQVNPQLAGHGGHVRLISISDDGVALVQFGGGCNGCSMVDVTLK 163
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 164 EGIEKELLAQFAGELTAVR 182
>gi|327402917|ref|YP_004343755.1| nitrogen-fixing NifU domain-containing protein [Fluviicola
taffensis DSM 16823]
gi|327318425|gb|AEA42917.1| nitrogen-fixing NifU domain-containing protein [Fluviicola
taffensis DSM 16823]
Length = 81
Score = 43.1 bits (100), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 127 NRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
N +RP + DGGD+ D GIV + + GACS C + T+K G+ + PE+
Sbjct: 17 NELRPHLVADGGDMELVDITDEGIVQVRLLGACSDCSMSMMTIKAGLEEAVKRVAPEIIA 76
Query: 186 IRTV 189
+ V
Sbjct: 77 VEAV 80
>gi|312882897|ref|ZP_07742629.1| putative DNA uptake protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369416|gb|EFP96936.1| putative DNA uptake protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 195
Score = 43.1 bits (100), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ + +V P +A GG++ + + +G+ ++ G C+GC TLK
Sbjct: 104 VNDDAPLIERVEYAIQTQVNPQLASHGGNVNLIEITEEGVAIVAFGGGCNGCSMVDVTLK 163
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 164 EGIEKELLQQFEGELTAVR 182
>gi|262279919|ref|ZP_06057704.1| IscR-regulated protein YhgI [Acinetobacter calcoaceticus RUH2202]
gi|262260270|gb|EEY79003.1| IscR-regulated protein YhgI [Acinetobacter calcoaceticus RUH2202]
Length = 212
Score = 43.1 bits (100), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI +L + P +A GG+ +D L G C GC + TL
Sbjct: 120 DASIEERITYILQAEINPGLAGHGGNCSLVEVQDNPEHGLTAVLKFGGGCQGCSAIDVTL 179
Query: 169 KYGVANILNHFVPEVKDI 186
K GV L +PE++ +
Sbjct: 180 KQGVETTLREHIPELQRV 197
>gi|51702196|sp|Q9PAB5|NFUA_XYLFA RecName: Full=Fe/S biogenesis protein nfuA
Length = 199
Score = 43.1 bits (100), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASE 166
G + +++V+R+ V++N + P +A GG + V + +G+V L G C GC
Sbjct: 100 GQELSQVASLVERVCWVVENEINPQLASHGGRVEVQEVSAEGVVLLRFGGGCHGCGMVDV 159
Query: 167 TLKYGVANILNHFVPEVKDIR 187
TLK GV L V V +R
Sbjct: 160 TLKQGVEKTLMERVHGVIAVR 180
>gi|15839192|ref|NP_299880.1| hypothetical protein XF2603 [Xylella fastidiosa 9a5c]
gi|9107825|gb|AAF85400.1|AE004067_7 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 176
Score = 43.1 bits (100), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASE 166
G + +++V+R+ V++N + P +A GG + V + +G+V L G C GC
Sbjct: 77 GQELSQVASLVERVCWVVENEINPQLASHGGRVEVQEVSAEGVVLLRFGGGCHGCGMVDV 136
Query: 167 TLKYGVANILNHFVPEVKDIR 187
TLK GV L V V +R
Sbjct: 137 TLKQGVEKTLMERVHGVIAVR 157
>gi|75765061|ref|ZP_00744362.1| PBS lyase HEAT-like repeat [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74487453|gb|EAO51368.1| PBS lyase HEAT-like repeat [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 169
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHLRPPV 77
+ +YDW+ L P V
Sbjct: 67 NAKYDWKVLLPQV 79
>gi|299822027|ref|ZP_07053914.1| NifU domain protein [Listeria grayi DSM 20601]
gi|299816655|gb|EFI83892.1| NifU domain protein [Listeria grayi DSM 20601]
Length = 79
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 127 NRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ RP +ARDGGD + +DG V + + GAC C S+ TLK G+ L
Sbjct: 15 QKFRPYLARDGGDYELIDVTKDGTVKIKLLGACESCASSEITLKVGLETTL 65
>gi|260551205|ref|ZP_05825408.1| iron-sulphur cluster biosynthesis family protein [Acinetobacter sp.
RUH2624]
gi|260405810|gb|EEW99299.1| iron-sulphur cluster biosynthesis family protein [Acinetobacter sp.
RUH2624]
Length = 212
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI VL + P +A GG+ +D L G C GC + TL
Sbjct: 120 DASIEERITYVLQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLKFGGGCQGCSAIDVTL 179
Query: 169 KYGVANILNHFVPEVKDI 186
K GV L +PE++ +
Sbjct: 180 KQGVETTLREHIPELQRV 197
>gi|126641029|ref|YP_001084013.1| putative membrane-bound protein in GNT I transport system (GntY)
[Acinetobacter baumannii ATCC 17978]
Length = 156
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI VL + P +A GG+ +D L G C GC + TL
Sbjct: 64 DASIEERITYVLQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLKFGGGCQGCSAIDVTL 123
Query: 169 KYGVANILNHFVPEVKDI 186
K GV L +PE++ +
Sbjct: 124 KQGVETTLKEHIPELQRV 141
>gi|67921275|ref|ZP_00514794.1| Nitrogen-fixing NifU, C-terminal:Rieske [2Fe-2S] region
[Crocosphaera watsonii WH 8501]
gi|67857392|gb|EAM52632.1| Nitrogen-fixing NifU, C-terminal:Rieske [2Fe-2S] region
[Crocosphaera watsonii WH 8501]
Length = 286
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILN 177
+RI++ L++ VRP + GD+ + V + + G CS CP+++ T+K GV +
Sbjct: 95 KRIEQALES-VRPGLKSHHGDVELVAIKLPDTVEVQLVGTCSNCPASTLTMKQGVEQAIK 153
Query: 178 HFVPEVKDIRTV 189
+ PE+ + +V
Sbjct: 154 TYCPEITKVISV 165
>gi|91214967|ref|ZP_01251939.1| nifU-like domain protein [Psychroflexus torquis ATCC 700755]
gi|91186572|gb|EAS72943.1| nifU-like domain protein [Psychroflexus torquis ATCC 700755]
Length = 87
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANIL 176
+++ E+ + +RP + DGGDI D +V + + G C C TLK GV +
Sbjct: 7 LRKTVEIALDEIRPFLKSDGGDIELLSIEDDSLVKVQLLGTCVDCTVNQMTLKSGVEMTI 66
Query: 177 NHFVPEVKDIRTV 189
+ P++K++ V
Sbjct: 67 KKYAPQIKEVINV 79
>gi|21672789|ref|NP_660856.1| hypothetical protein BUsg525 [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25091672|sp|Q8K934|NFUA_BUCAP RecName: Full=Fe/S biogenesis protein nfuA
gi|21623438|gb|AAM68067.1| hypothetical 21.0 kDa protein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 192
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
S++ +RI+ L+N + P ++ GG + + + ++ + G C+GC TLK V
Sbjct: 106 SSLKERIENFLNNNINPQLSMHGGKVHLIQISQNNTALIKFTGGCNGCSMIGTTLKEIVE 165
Query: 174 NILNHFVPEVKDI 186
+ F PE+K +
Sbjct: 166 KKILSFFPEIKKV 178
>gi|317050896|ref|YP_004112012.1| nitrogen-fixing NifU domain-containing protein [Desulfurispirillum
indicum S5]
gi|316945980|gb|ADU65456.1| nitrogen-fixing NifU domain protein [Desulfurispirillum indicum S5]
Length = 321
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDG----IVFLSMRGACSGCPSASETLKYGVA 173
++ I E L V+P +ARDGG + ++G +VF+ GAC+GC S++ +
Sbjct: 246 IKAIDEALTAHVKPMLARDGGSVELVDIKEGDNEILVFIQYSGACAGCASSNTGTLQAIL 305
Query: 174 NILNHFVPE 182
IL + E
Sbjct: 306 GILREKLDE 314
>gi|308061573|gb|ADO03461.1| nifU-like protein [Helicobacter pylori Cuz20]
Length = 326
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIV---FKGYRDGI-VFLSMRGACS 159
SG+ + +VQ+IK +V+D +RP + DGGD+ K D I V++ GAC
Sbjct: 237 SGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|300718787|ref|YP_003743590.1| Fe/S biogenesis protein [Erwinia billingiae Eb661]
gi|299064623|emb|CAX61743.1| Fe/S biogenesis protein [Erwinia billingiae Eb661]
Length = 191
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
++ ++ +++R++ L + P +A GG + + + DG L G C+GC TLK
Sbjct: 101 VDDNAPLIERVEYQLQATINPQLASHGGKVSLMEITDDGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGVANILNHFVPEVKDIR 187
G+ L PE+K +R
Sbjct: 161 EGIEKELLVAFPELKGVR 178
>gi|317181531|dbj|BAJ59315.1| nifU-like protein [Helicobacter pylori F57]
Length = 326
Score = 42.7 bits (99), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIV---FKGYRDGI-VFLSMRGACS 159
SG+ + +VQ+IK +V+D +RP + DGGD+ K D I V++ GAC
Sbjct: 237 SGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|297379446|gb|ADI34333.1| Nitrogen fixation protein nifU [Helicobacter pylori v225d]
Length = 326
Score = 42.7 bits (99), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIV---FKGYRDGI-VFLSMRGACS 159
SG+ + +VQ+IK +V+D +RP + DGGD+ K D I V++ GAC
Sbjct: 237 SGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|219113897|ref|XP_002176135.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402927|gb|EEC42886.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 77
Score = 42.7 bits (99), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +VLD VRP + DGG++ + V+L + GAC C S++ T++ G+ +L
Sbjct: 5 VDKVLD-EVRPYLISDGGNVSVESVDADSQTVYLKLEGACGSCSSSTVTMQMGIERVLKE 63
Query: 179 FVPEVKDIRTV 189
P ++++ V
Sbjct: 64 KYPNLREVLQV 74
>gi|15644849|ref|NP_207019.1| nifU-like protein [Helicobacter pylori 26695]
gi|2313312|gb|AAD07289.1| nifU-like protein [Helicobacter pylori 26695]
Length = 326
Score = 42.7 bits (99), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIV---FKGYRDGI-VFLSMRGACS 159
SG+ + +VQ+IK +V+D +RP + DGGD+ K D I V++ GAC
Sbjct: 237 SGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|308063082|gb|ADO04969.1| nifU-like protein [Helicobacter pylori Sat464]
Length = 326
Score = 42.7 bits (99), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIV---FKGYRDGI-VFLSMRGACS 159
SG+ + +VQ+IK +V+D +RP + DGGD+ K D I V++ GAC
Sbjct: 237 SGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|254778929|ref|YP_003057034.1| [Fe-S] cluster scaffold protein [Helicobacter pylori B38]
gi|254000840|emb|CAX28770.1| [Fe-S] cluster scaffold protein [Helicobacter pylori B38]
Length = 326
Score = 42.7 bits (99), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIV---FKGYRDGI-VFLSMRGACS 159
SG+ + +VQ+IK +V+D +RP + DGGD+ K D I V++ GAC
Sbjct: 237 SGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|323450669|gb|EGB06549.1| hypothetical protein AURANDRAFT_9527 [Aureococcus anophagefferens]
Length = 69
Score = 42.7 bits (99), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGI-VFLSMRGACSGCPSASETLKYGVANI 175
++ + +VLD +VRP + DGG++ V D V L + GAC CPS+++T+K G+ +
Sbjct: 4 LENVDKVLD-QVRPYLVADGGNVAVVSADPDSKDVILHLEGACGSCPSSTQTMKMGIERV 62
Query: 176 LNH 178
L
Sbjct: 63 LRE 65
>gi|255319128|ref|ZP_05360346.1| IscR-regulated protein YhgI [Acinetobacter radioresistens SK82]
gi|262379260|ref|ZP_06072416.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|255303774|gb|EET82973.1| IscR-regulated protein YhgI [Acinetobacter radioresistens SK82]
gi|262298717|gb|EEY86630.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 212
Score = 42.7 bits (99), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGIV-FLSMRGACSGCPSASETL 168
D+++ +RI VL + + P +A GG+ V + G+ L G C GC + TL
Sbjct: 120 DASIEERITYVLQSEINPGLAGHGGNCALVEVVEDEEHGLTAVLKFGGGCQGCSAIDVTL 179
Query: 169 KYGVANILNHFVPEVKDI 186
K GV L +PE+ +
Sbjct: 180 KQGVETTLKQHIPELSRV 197
>gi|78222211|ref|YP_383958.1| Fe-S cluster assembly protein NifU [Geobacter metallireducens
GS-15]
gi|78193466|gb|ABB31233.1| Fe-S cluster assembly protein NifU [Geobacter metallireducens
GS-15]
Length = 286
Score = 42.7 bits (99), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
+Q I+E L+ +RP + DGGD+ V ++ R AC+GC S+ T K+
Sbjct: 214 MQLIQETLEKEIRPLLWADGGDLELVDISGSEVQIAFRKACAGCASSGNTAKF 266
>gi|327485189|gb|AEA79596.1| NfuA Fe-S protein maturation [Vibrio cholerae LMA3894-4]
Length = 195
Score = 42.7 bits (99), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ L +V P +A GG + D G+ + G C+GC TLK
Sbjct: 104 VSDDAPLMERVEYALQTQVNPQLAGHGGHVSLISISDDGVALVQFGGGCNGCSMVDVTLK 163
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 164 EGIEKELLAQFAGELTAVR 182
>gi|261250552|ref|ZP_05943127.1| hypothetical protein VIA_000571 [Vibrio orientalis CIP 102891]
gi|260939121|gb|EEX95108.1| hypothetical protein VIA_000571 [Vibrio orientalis CIP 102891]
Length = 195
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +V+R++ V+ +V P +A GG + + + G+ ++ G C+GC TLK
Sbjct: 104 VSDDAPLVERVEYVIQTQVNPQLAGHGGHVNLVEITEQGVAIVAFGGGCNGCSMVDVTLK 163
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 164 EGIEKELLQQFEGELSAVR 182
>gi|229017494|ref|ZP_04174395.1| hypothetical protein bcere0030_20470 [Bacillus cereus AH1273]
gi|229023708|ref|ZP_04180200.1| hypothetical protein bcere0029_20430 [Bacillus cereus AH1272]
gi|228737633|gb|EEL88137.1| hypothetical protein bcere0029_20430 [Bacillus cereus AH1272]
gi|228743818|gb|EEL93919.1| hypothetical protein bcere0030_20470 [Bacillus cereus AH1273]
Length = 375
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKL 102
+ +YDW+ L V + E + G++K+
Sbjct: 67 NAKYDWKVLLQQVRAVFGEEIVEESAEQQLSHFGEVKV 104
>gi|149190638|ref|ZP_01868906.1| predicted gluconate transport associated protein [Vibrio shilonii
AK1]
gi|148835521|gb|EDL52490.1| predicted gluconate transport associated protein [Vibrio shilonii
AK1]
Length = 207
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ + +V P +A GG + + + DGI + G C+GC TLK
Sbjct: 116 VADDAPLMERVEYAIQTQVNPQLAGHGGHVSLMEITEDGIAIVQFGGGCNGCSMVDVTLK 175
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 176 EGIEKQLLQEFSGELTAVR 194
>gi|152991603|ref|YP_001357324.1| hypothetical protein SUN_0006 [Sulfurovum sp. NBC37-1]
gi|151423464|dbj|BAF70967.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 324
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 114 DSAVVQRIKEV---LDNRVRPAVARDGGDIVFKGYRDG----IVFLSMRGACSGCPSASE 166
D +VQ+IK V +D +R + DGGD+ +D +++ GAC+GC SAS
Sbjct: 242 DMTIVQKIKAVDKTVDENIRQMLIMDGGDMEILDIKDNGENIDIYIRYLGACNGCASAST 301
Query: 167 TLKYGVANILNH 178
+ + NIL
Sbjct: 302 GTLFAIENILKE 313
>gi|145630391|ref|ZP_01786172.1| predicted gluconate transport-associated protein [Haemophilus
influenzae R3021]
gi|260582302|ref|ZP_05850095.1| Fe/S biogenesis protein nfuA [Haemophilus influenzae NT127]
gi|144984126|gb|EDJ91563.1| predicted gluconate transport-associated protein [Haemophilus
influenzae R3021]
gi|260094670|gb|EEW78565.1| Fe/S biogenesis protein nfuA [Haemophilus influenzae NT127]
Length = 198
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ V+ ++ P +A GG I + DG L G C+GC TLK
Sbjct: 107 VADDAPLIERVEYVIQTQINPQLANHGGRITLIEITEDGYAVLQFGGGCNGCSMVDVTLK 166
Query: 170 YGVANILNHFVP-EVKDIRTV 189
GV L P E+K + V
Sbjct: 167 DGVEKQLVSLFPNELKGAKDV 187
>gi|188527026|ref|YP_001909713.1| nifU-like protein [Helicobacter pylori Shi470]
gi|188143266|gb|ACD47683.1| nifU-like protein [Helicobacter pylori Shi470]
Length = 326
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIV---FKGYRDGI-VFLSMRGACS 159
SG+ + +VQ+IK +V+D +RP + DGGD+ K D I V++ GAC
Sbjct: 237 SGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSAATGTLFAIENALQELL 317
>gi|315635110|ref|ZP_07890388.1| Fe/S-biogenesis protein NfuA [Aggregatibacter segnis ATCC 33393]
gi|315476072|gb|EFU66826.1| Fe/S-biogenesis protein NfuA [Aggregatibacter segnis ATCC 33393]
Length = 194
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ V+ ++ P +A GG I + + DG L G C+GC TLK
Sbjct: 103 VADDAPLIERVEYVIQTQINPQLASHGGKITLLEITDDGYAILQFGGGCNGCSMVDVTLK 162
Query: 170 YGVANILNHFVPE 182
GV L P+
Sbjct: 163 DGVEKQLISLFPD 175
>gi|33242221|ref|NP_877162.1| NifU-like protein [Chlamydophila pneumoniae TW-183]
gi|33236732|gb|AAP98819.1| NifU-like protein [Chlamydophila pneumoniae TW-183]
Length = 266
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 100 MKLDDMGSGDFIESDSAVVQR------IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLS 153
M LD + + +SD + ++ + ++ P +A DGG++ + + IV ++
Sbjct: 162 MNLDFEDANPYSQSDWEALTHEQKLYALRATIAEKIGPYIAMDGGEVTVESLENFIVTIA 221
Query: 154 MRGACSGCPSASETLKYGVANILNHFV-PEVK 184
G CSGCPS+ + + +L ++ PE++
Sbjct: 222 YSGNCSGCPSSLGSTLNSIGQLLRAYIYPELQ 253
>gi|15618770|ref|NP_225056.1| NifU-related protein [Chlamydophila pneumoniae CWL029]
gi|15836394|ref|NP_300918.1| NifU-related protein [Chlamydophila pneumoniae J138]
gi|4377178|gb|AAD18999.1| NifU-related protein [Chlamydophila pneumoniae CWL029]
gi|8979235|dbj|BAA99069.1| NifU-related protein [Chlamydophila pneumoniae J138]
Length = 266
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 100 MKLDDMGSGDFIESDSAVVQR------IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLS 153
M LD + + +SD + ++ + ++ P +A DGG++ + + IV ++
Sbjct: 162 MNLDFEDANPYSQSDWEALTHEQKLYALRATIAEKIGPYIAMDGGEVTVESLENFIVTIA 221
Query: 154 MRGACSGCPSASETLKYGVANILNHFV-PEVK 184
G CSGCPS+ + + +L ++ PE++
Sbjct: 222 YSGNCSGCPSSLGSTLNSIGQLLRAYIYPELQ 253
>gi|289435662|ref|YP_003465534.1| NifU family protein [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289171906|emb|CBH28452.1| NifU family protein [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|313632102|gb|EFR99193.1| nitrogen fixation protein NifU [Listeria seeligeri FSL N1-067]
gi|313636487|gb|EFS02228.1| nitrogen fixation protein NifU [Listeria seeligeri FSL S4-171]
Length = 78
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 127 NRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
+ RP + RDGGD + + DG V + + GAC CPS+ TLK G+ L + K+
Sbjct: 14 KKFRPFLVRDGGDYELVEVTPDGTVKIKLLGACETCPSSDMTLKMGIELTLAEKIIGFKE 73
Query: 186 IRTV 189
+ V
Sbjct: 74 VVQV 77
>gi|261867263|ref|YP_003255185.1| putative DNA uptake protein [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261412595|gb|ACX81966.1| IscR-regulated protein YhgI [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 194
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ V+ ++ P +A GG I + + DG L G C+GC TLK
Sbjct: 103 VADDAPLIERVEYVIQTQINPQLASHGGKITLLEITDDGYAILQFGGGCNGCSMVDVTLK 162
Query: 170 YGVANILNHFVP 181
GV L + P
Sbjct: 163 DGVEKQLVNIFP 174
>gi|288931963|ref|YP_003436023.1| nitrogen-fixing NifU domain protein [Ferroglobus placidus DSM
10642]
gi|288894211|gb|ADC65748.1| nitrogen-fixing NifU domain protein [Ferroglobus placidus DSM
10642]
Length = 77
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 130 RPAVARDGGDI--VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
RPA+ RDGG+I V G V + + G+C GCP + TL V L VPEVK +
Sbjct: 16 RPALIRDGGNIAVVDVDEESGEVKVKLLGSCYGCPMSQITLTMFVEQHLKSRVPEVKKVT 75
Query: 188 TV 189
V
Sbjct: 76 PV 77
>gi|152996366|ref|YP_001341201.1| HesB/YadR/YfhF-family protein [Marinomonas sp. MWYL1]
gi|150837290|gb|ABR71266.1| HesB/YadR/YfhF-family protein [Marinomonas sp. MWYL1]
Length = 193
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLK 169
+ +DS + +I VL + + P +A GG++ DG + L G C GC + TLK
Sbjct: 103 VTADSPIEDQINYVLYSDINPGLAAHGGEVSLLEVIDGKVAVLKFGGGCQGCSAVDLTLK 162
Query: 170 YGVANILNHFVPEVKDIR 187
GV L VP + ++
Sbjct: 163 EGVEKTLMEKVPGLTAVK 180
>gi|16752178|ref|NP_445545.1| nifU protein, putative [Chlamydophila pneumoniae AR39]
gi|7189922|gb|AAF38786.1| nifU protein, putative [Chlamydophila pneumoniae AR39]
Length = 266
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 100 MKLDDMGSGDFIESDSAVVQR------IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLS 153
M LD + + +SD + ++ + ++ P +A DGG++ + + IV ++
Sbjct: 162 MNLDFEDANPYSQSDWEALTHEQKLYALRATIAEKIGPYIAMDGGEVTVESLENFIVTIA 221
Query: 154 MRGACSGCPSASETLKYGVANILNHFV-PEVK 184
G CSGCPS+ + + +L ++ PE++
Sbjct: 222 YSGNCSGCPSSLGSTLNSIGQLLRAYIYPELQ 253
>gi|293391255|ref|ZP_06635589.1| IscR-regulated protein YhgI [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290951789|gb|EFE01908.1| IscR-regulated protein YhgI [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 194
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ V+ ++ P +A GG I + + DG L G C+GC TLK
Sbjct: 103 VADDAPLIERVEYVIQTQINPQLASHGGKITLLEITDDGYAILQFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
GV ++N F E+ R V
Sbjct: 163 DGVEKQLVNIFPGELNGARDV 183
>gi|154148924|ref|YP_001405665.1| nitrogen fixation protein NifU [Campylobacter hominis ATCC BAA-381]
gi|153804933|gb|ABS51940.1| nitrogen fixation protein NifU [Campylobacter hominis ATCC BAA-381]
Length = 330
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 119 QRIKEVLDNRVRPAVARDGG--DIV-FKGYRDGI--VFLSMRGACSGCPSASETLKYGVA 173
+ +++V+D +RP +A DGG DIV K DG +++ GACSGC S + Y +
Sbjct: 255 KAVEDVIDKEIRPMLAFDGGNLDIVDIKNADDGKTDIYIRYLGACSGCSSGATGTLYAIE 314
Query: 174 NILNH 178
N+L
Sbjct: 315 NVLQE 319
>gi|32266062|ref|NP_860094.1| NifU-like protein [Helicobacter hepaticus ATCC 51449]
gi|32262111|gb|AAP77160.1| NifU-like protein [Helicobacter hepaticus ATCC 51449]
Length = 326
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 108 GDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIV---FKGYRDGIVFLSMR--GACS 159
G+ ++ +VQ++K +++D +RP + DGGD+ K DG + + +R GACS
Sbjct: 237 GNLAFAEMTMVQKVKSIDKIIDENIRPMLMMDGGDMEILDIKDTSDGFIDVYIRYLGACS 296
Query: 160 GCPSASETLKYGVANILNH 178
GC S + Y + ++L
Sbjct: 297 GCASGATGTLYAIESVLQE 315
>gi|269302647|gb|ACZ32747.1| NifU family protein [Chlamydophila pneumoniae LPCoLN]
Length = 266
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 100 MKLDDMGSGDFIESDSAVVQR------IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLS 153
M LD + + +SD + ++ + ++ P +A DGG++ + + IV ++
Sbjct: 162 MNLDFEDANPYSQSDWEALTHEQKLYALRATIAEKIGPYIAMDGGEVTVESLENFIVTIA 221
Query: 154 MRGACSGCPSASETLKYGVANILNHFV-PEVK 184
G CSGCPS+ + + +L ++ PE++
Sbjct: 222 YSGNCSGCPSSLGSTLNSIGQLLRAYIYPELQ 253
>gi|260771979|ref|ZP_05880896.1| protein gntY [Vibrio metschnikovii CIP 69.14]
gi|260612846|gb|EEX38048.1| protein gntY [Vibrio metschnikovii CIP 69.14]
Length = 166
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
++ D+ ++ R++ + +V P +A GG + D G+ L G C+GC TLK
Sbjct: 75 VDDDAPLMARVEYAIQTQVNPQLAGHGGHVSLVNITDEGVALLQFGGGCNGCSMVDVTLK 134
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 135 EGIEKELLAQFAGELTAVR 153
>gi|329122310|ref|ZP_08250898.1| Fe/S-biogenesis protein NfuA [Haemophilus aegyptius ATCC 11116]
gi|327473871|gb|EGF19288.1| Fe/S-biogenesis protein NfuA [Haemophilus aegyptius ATCC 11116]
Length = 198
Score = 42.4 bits (98), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ V+ ++ P +A GG I + DG L G C+GC TLK
Sbjct: 107 VADDAPLIERVEYVIQTQINPQLANHGGRITLIEITEDGYAVLQFGGGCNGCSMVDVTLK 166
Query: 170 YGVANILNHFVP 181
GV L P
Sbjct: 167 DGVEKQLVSLFP 178
>gi|168698909|ref|ZP_02731186.1| NifU-like nitrogen fixation protein [Gemmata obscuriglobus UQM
2246]
Length = 76
Score = 42.4 bits (98), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+R++ L + PA+ DG I G+ + + GAC+GCP+ T+ + + L
Sbjct: 5 ERVEHALKVEIAPALMLDGAGIEVLEVTGGVASVRLSGACAGCPATIMTVITSLEDELRK 64
Query: 179 FVPEVKDIRTV 189
VPEV+ + V
Sbjct: 65 KVPEVEILEAV 75
>gi|149000|gb|AAA25015.1| The predicted molecular weight and pI of ORF G are 21.8 Kd and 4.3
respectively; ORF G; putative [Haemophilus influenzae]
Length = 198
Score = 42.4 bits (98), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ V+ ++ P +A GG I + DG L G C+GC TLK
Sbjct: 107 VADDAPLIERVEYVIQTQINPQLANHGGRITLIEITEDGYAVLQFGGGCNGCSMVDVTLK 166
Query: 170 YGVANILNHFVP 181
GV L P
Sbjct: 167 DGVEKQLVSLFP 178
>gi|326798778|ref|YP_004316597.1| nitrogen-fixing NifU domain-containing protein [Sphingobacterium
sp. 21]
gi|326549542|gb|ADZ77927.1| nitrogen-fixing NifU domain-containing protein [Sphingobacterium
sp. 21]
Length = 92
Score = 42.4 bits (98), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+R++E L N +RP + DGG++ + + +V L + G+C+ C + T K G+ +
Sbjct: 5 ERVEEAL-NTLRPYLEADGGNVTIEEITSENVVRLRLLGSCASCSMSIMTFKAGLEQAIQ 63
Query: 178 HFVPEVKDIRTV 189
VPE+ + +
Sbjct: 64 KAVPEITAVEAI 75
>gi|258620406|ref|ZP_05715444.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258624640|ref|ZP_05719576.1| Fe/S biogenesis protein nfuA [Vibrio mimicus VM603]
gi|262166729|ref|ZP_06034466.1| protein gntY [Vibrio mimicus VM223]
gi|262170348|ref|ZP_06038026.1| protein gntY [Vibrio mimicus MB-451]
gi|258583104|gb|EEW07917.1| Fe/S biogenesis protein nfuA [Vibrio mimicus VM603]
gi|258587285|gb|EEW11996.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|261891424|gb|EEY37410.1| protein gntY [Vibrio mimicus MB-451]
gi|262026445|gb|EEY45113.1| protein gntY [Vibrio mimicus VM223]
Length = 195
Score = 42.4 bits (98), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ L +V P +A GG + D G+ + G C+GC TLK
Sbjct: 104 VADDAPLMERVEYALQTQVNPQLAGHGGHVSLISISDDGVALVQFGGGCNGCSMVDVTLK 163
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 164 EGIEKELLAQFAGELTAVR 182
>gi|16272381|ref|NP_438594.1| putative DNA uptake protein [Haemophilus influenzae Rd KW20]
gi|260580504|ref|ZP_05848332.1| Fe/S biogenesis protein nfuA [Haemophilus influenzae RdAW]
gi|1176271|sp|P31774|NFUA_HAEIN RecName: Full=Fe/S biogenesis protein nfuA
gi|148877|gb|AAA24950.1| ORF 3 [Haemophilus influenzae]
gi|1573408|gb|AAC22092.1| orfG protein [Haemophilus influenzae Rd KW20]
gi|260092846|gb|EEW76781.1| Fe/S biogenesis protein nfuA [Haemophilus influenzae RdAW]
Length = 198
Score = 42.4 bits (98), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ V+ ++ P +A GG I + DG L G C+GC TLK
Sbjct: 107 VADDAPLIERVEYVIQTQINPQLANHGGRITLIEITEDGYAVLQFGGGCNGCSMVDVTLK 166
Query: 170 YGVANILNHFVP 181
GV L P
Sbjct: 167 DGVEKQLVSLFP 178
>gi|145632678|ref|ZP_01788412.1| conserved hypothetical 21.9 kD protein in locus involved in
transformation [Haemophilus influenzae 3655]
gi|145634570|ref|ZP_01790279.1| predicted gluconate transport-associated protein [Haemophilus
influenzae PittAA]
gi|229844407|ref|ZP_04464547.1| putative DNA uptake protein [Haemophilus influenzae 6P18H1]
gi|229846519|ref|ZP_04466627.1| putative DNA uptake protein [Haemophilus influenzae 7P49H1]
gi|144986873|gb|EDJ93425.1| conserved hypothetical 21.9 kD protein in locus involved in
transformation [Haemophilus influenzae 3655]
gi|145268115|gb|EDK08110.1| predicted gluconate transport-associated protein [Haemophilus
influenzae PittAA]
gi|229810612|gb|EEP46330.1| putative DNA uptake protein [Haemophilus influenzae 7P49H1]
gi|229812656|gb|EEP48345.1| putative DNA uptake protein [Haemophilus influenzae 6P18H1]
gi|309972410|gb|ADO95611.1| Fe/S biogenesis protein NfuA [Haemophilus influenzae R2846]
Length = 198
Score = 42.4 bits (98), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ V+ ++ P +A GG I + DG L G C+GC TLK
Sbjct: 107 VADDAPLIERVEYVIQTQINPQLANHGGRITLIEITEDGYAVLQFGGGCNGCSMVDVTLK 166
Query: 170 YGVANILNHFVP 181
GV L P
Sbjct: 167 DGVEKQLVSLFP 178
>gi|68249033|ref|YP_248145.1| putative DNA uptake protein [Haemophilus influenzae 86-028NP]
gi|145628803|ref|ZP_01784603.1| conserved hypothetical 21.9 kD protein in locus involved in
transformation [Haemophilus influenzae 22.1-21]
gi|145636298|ref|ZP_01791967.1| predicted gluconate transport-associated protein [Haemophilus
influenzae PittHH]
gi|145638657|ref|ZP_01794266.1| predicted gluconate transport-associated protein [Haemophilus
influenzae PittII]
gi|145640398|ref|ZP_01795982.1| conserved hypothetical 21.9 kD protein in locus involved in
transformation [Haemophilus influenzae R3021]
gi|148825287|ref|YP_001290040.1| putative DNA uptake protein [Haemophilus influenzae PittEE]
gi|148827630|ref|YP_001292383.1| putative DNA uptake protein [Haemophilus influenzae PittGG]
gi|319775640|ref|YP_004138128.1| Fe/S biogenesis protein nfu [Haemophilus influenzae F3047]
gi|81336556|sp|Q4QNB2|NFUA_HAEI8 RecName: Full=Fe/S biogenesis protein nfuA
gi|166990525|sp|A5UA56|NFUA_HAEIE RecName: Full=Fe/S biogenesis protein nfuA
gi|166990526|sp|A5UGU4|NFUA_HAEIG RecName: Full=Fe/S biogenesis protein nfuA
gi|68057232|gb|AAX87485.1| conserved hypothetical 21.9 kD protein in locus involved in
transformation [Haemophilus influenzae 86-028NP]
gi|144979273|gb|EDJ88959.1| conserved hypothetical 21.9 kD protein in locus involved in
transformation [Haemophilus influenzae 22.1-21]
gi|145270463|gb|EDK10397.1| predicted gluconate transport-associated protein [Haemophilus
influenzae PittHH]
gi|145272252|gb|EDK12160.1| predicted gluconate transport-associated protein [Haemophilus
influenzae PittII]
gi|145274984|gb|EDK14846.1| conserved hypothetical 21.9 kD protein in locus involved in
transformation [Haemophilus influenzae 22.4-21]
gi|148715447|gb|ABQ97657.1| predicted gluconate transport-associated protein [Haemophilus
influenzae PittEE]
gi|148718872|gb|ABQ99999.1| conserved hypothetical 21.9 kD protein in locus involved in
transformation [Haemophilus influenzae PittGG]
gi|301169133|emb|CBW28730.1| predicted gluconate transport associated protein [Haemophilus
influenzae 10810]
gi|309750151|gb|ADO80135.1| Fe/S biogenesis protein NfuA [Haemophilus influenzae R2866]
gi|317450231|emb|CBY86447.1| Fe/S biogenesis protein nfu [Haemophilus influenzae F3047]
Length = 198
Score = 42.4 bits (98), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ V+ ++ P +A GG I + DG L G C+GC TLK
Sbjct: 107 VADDAPLIERVEYVIQTQINPQLANHGGRITLIEITEDGYAVLQFGGGCNGCSMVDVTLK 166
Query: 170 YGVANILNHFVP 181
GV L P
Sbjct: 167 DGVEKQLVSLFP 178
>gi|319898046|ref|YP_004136243.1| fe/s biogenesis protein nfu [Haemophilus influenzae F3031]
gi|317433552|emb|CBY81936.1| Fe/S biogenesis protein nfu [Haemophilus influenzae F3031]
Length = 198
Score = 42.4 bits (98), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ V+ ++ P +A GG I + DG L G C+GC TLK
Sbjct: 107 VADDAPLIERVEYVIQTQINPQLANHGGRITLIEITEDGYAVLQFGGGCNGCSMVDVTLK 166
Query: 170 YGVANILNHFVP 181
GV L P
Sbjct: 167 DGVEKQLVSLFP 178
>gi|262402006|ref|ZP_06078571.1| protein gntY [Vibrio sp. RC586]
gi|262351978|gb|EEZ01109.1| protein gntY [Vibrio sp. RC586]
Length = 166
Score = 42.4 bits (98), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ L +V P +A GG + D G+ + G C+GC TLK
Sbjct: 75 VADDAPLMERVEYALQTQVNPQLAGHGGHVSLISISDDGVALVQFGGGCNGCSMVDVTLK 134
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 135 EGIEKELLAQFAGELTAVR 153
>gi|329297358|ref|ZP_08254694.1| Fe/S biogenesis protein NfuA [Plautia stali symbiont]
Length = 191
Score = 42.4 bits (98), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +V+R++ +L ++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VSDDAPMVERVEYLLQAQINPQLASHGGRVSLMEITDEGYAILQFGGGCNGCSMIDVTLK 160
Query: 170 YGVANILNHFVPEVKDI 186
G+ L PE+K +
Sbjct: 161 DGIEKELLAAFPELKGV 177
>gi|300869885|ref|YP_003784756.1| NifU like N terminal domain-containing protein [Brachyspira
pilosicoli 95/1000]
gi|300687584|gb|ADK30255.1| NifU like N terminal domain protein [Brachyspira pilosicoli
95/1000]
Length = 277
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
Query: 95 GGLG--DMKLDDMGSGDFIESDSA-------VVQRIK---EVLDNRVRPAVARDGGDIVF 142
GG G +KL+D+ + + E + A VQ+IK E ++ + P + DGG
Sbjct: 171 GGCGACKVKLEDILNEELAERERAQKNAPLTTVQKIKKIEEAIETVINPMLKMDGGSCKL 230
Query: 143 KGYRDGIVFLSMRGACSGCPSASETLK 169
IV +S +GACS C ++ TLK
Sbjct: 231 VDIEGNIVKISFKGACSSCMASKNTLK 257
>gi|307823832|ref|ZP_07654060.1| Fe-S cluster assembly protein NifU [Methylobacter tundripaludum
SV96]
gi|307735126|gb|EFO05975.1| Fe-S cluster assembly protein NifU [Methylobacter tundripaludum
SV96]
Length = 301
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+++I+EVL++ +RPA+ DGGD+ +++M GAC+GC A+ T+
Sbjct: 220 IKKIEEVLES-LRPALMADGGDVELVEVIGNTAYVNMTGACNGCQMAAMTI 269
>gi|39997110|ref|NP_953061.1| NifU family protein [Geobacter sulfurreducens PCA]
gi|39984000|gb|AAR35388.1| NifU family protein [Geobacter sulfurreducens PCA]
gi|298506123|gb|ADI84846.1| nitrogen fixation iron-sulfur cluster assembly protein NifU
[Geobacter sulfurreducens KN400]
Length = 285
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q I+E L+ +RP + DGGD+ V ++ R AC+GC ++ T K+ V L
Sbjct: 213 MQLIQETLEKEIRPQLWADGGDLELIDISGSEVQIAFRKACAGCAASGNTAKF-VEMKLR 271
Query: 178 HFVPE 182
V E
Sbjct: 272 ELVAE 276
>gi|71907146|ref|YP_284733.1| Fe-S cluster assembly protein NifU [Dechloromonas aromatica RCB]
gi|71846767|gb|AAZ46263.1| Fe-S cluster assembly protein NifU [Dechloromonas aromatica RCB]
Length = 298
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+ +I+EVL++ VRP + RD GD+ + +++ ++GACSGC + TL
Sbjct: 222 IAKIQEVLES-VRPMLLRDHGDVELADVQGKKIYVHLKGACSGCMMEAATL 271
>gi|98152888|ref|YP_611137.1| nitrogen-fixing NifU-like [Sphingopyxis alaskensis RB2256]
gi|95105285|gb|ABF54908.1| nitrogen-fixing NifU-like [Sphingopyxis alaskensis RB2256]
Length = 311
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGD---IVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
+++ +R+ L VRP +A GGD + G + + FL GAC GCP+++ T G
Sbjct: 114 ASLFERVDAALAT-VRPTLAGHGGDAELVEVSGDKAVVRFL---GACDGCPASALTFYAG 169
Query: 172 VANILNHFVPEVKDIR 187
V + VPE+++++
Sbjct: 170 VKKAITEQVPEIREVK 185
>gi|308160832|gb|EFO63302.1| Hypothetical protein GLP15_1091 [Giardia lamblia P15]
Length = 197
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 37 EISPLASRIFSIPGIASVYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNG 95
E L S + + G+ + +TV + Q W +R + + F P N
Sbjct: 41 EAPSLQSDLMKVKGVKKLSISPTGVTVTVRSQGIWPSVRSAIEDKVYAAFDPNTPHTPN- 99
Query: 96 GLGDMKL---DDMGSGDFIESDSAVVQRIKEVL-DNRVRPAVARDGGDIVFKGY----RD 147
+++L + + +G + ++ +++ E+L + P +ARDGG ++ + +
Sbjct: 100 ---ELRLAIQEILNTGSRVPNN---IRKASELLIKAAINPFLARDGGSCSYERHELTDKG 153
Query: 148 GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
+V++ + G CSGC ++ T+ V + ++P++ ++
Sbjct: 154 LVVYIKLHGNCSGCSKSTTTMNTFVISEFKRYIPDIHTVK 193
>gi|299771122|ref|YP_003733148.1| Iron-sulfur cluster biosynthesis family protein [Acinetobacter sp.
DR1]
gi|298701210|gb|ADI91775.1| Iron-sulfur cluster biosynthesis family protein [Acinetobacter sp.
DR1]
Length = 212
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI +L + P +A GG+ +D L G C GC + TL
Sbjct: 120 DASIEERITYILQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLKFGGGCQGCSAIDVTL 179
Query: 169 KYGVANILNHFVPEVKDI 186
K GV L +PE++ +
Sbjct: 180 KQGVETTLKEQIPELQRV 197
>gi|298206741|ref|YP_003714920.1| NifU protein, putative [Croceibacter atlanticus HTCC2559]
gi|83849372|gb|EAP87240.1| NifU protein, putative [Croceibacter atlanticus HTCC2559]
Length = 80
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 128 RVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+RP + DGGDI D VF+ + G C GC TLK GV + P+++ +
Sbjct: 16 EIRPFLQNDGGDISLVSIEDDKTVFVKLMGNCVGCSVNQMTLKSGVEMTIKKHAPQIEKV 75
>gi|212702241|ref|ZP_03310369.1| hypothetical protein DESPIG_00252 [Desulfovibrio piger ATCC 29098]
gi|212674304|gb|EEB34787.1| hypothetical protein DESPIG_00252 [Desulfovibrio piger ATCC 29098]
Length = 260
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 118 VQRIKEVL---DNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
VQR++ V+ + +RP +A DGGDI V +S+RG C+ C S+ T++ V
Sbjct: 186 VQRMQLVMKTIEEEIRPQLAADGGDIELVDVDGKRVVVSLRGRCAQCRSSEVTIRNLVER 245
Query: 175 ILNHFV 180
+L V
Sbjct: 246 VLREHV 251
>gi|307151545|ref|YP_003886929.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Cyanothece
sp. PCC 7822]
gi|306981773|gb|ADN13654.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. PCC
7822]
Length = 292
Score = 42.0 bits (97), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILN 177
+R+ + L+ VRP + GD+ V + + G CS CP+++ T+K GV +
Sbjct: 100 KRLNQALEE-VRPGLKSHNGDVELVAIELPDTVKVRLVGTCSNCPASTLTMKQGVEQTIK 158
Query: 178 HFVPEVKDIRTV 189
++ PE+ + +V
Sbjct: 159 NYCPEITHVISV 170
>gi|153955633|ref|YP_001396398.1| hypothetical protein CKL_3019 [Clostridium kluyveri DSM 555]
gi|219856010|ref|YP_002473132.1| hypothetical protein CKR_2667 [Clostridium kluyveri NBRC 12016]
gi|146348491|gb|EDK35027.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219569734|dbj|BAH07718.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 107
Score = 42.0 bits (97), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
++ ++I +V+D +VRP + GDI G +DG+V + + G CSGC SA T++ V
Sbjct: 14 SMKEKILKVIDEKVRPYLNSHNGDIEVVGVKDGVVKVKLLGQCSGCISAKYTVQDIVEGS 73
Query: 176 LNHFVPEVKDIRTV 189
+ + +PE+K + +
Sbjct: 74 IKNEIPEIKSVEVI 87
>gi|330507732|ref|YP_004384160.1| NifU-like domain-containing protein [Methanosaeta concilii GP-6]
gi|328928540|gb|AEB68342.1| NifU-like domain protein [Methanosaeta concilii GP-6]
Length = 75
Score = 42.0 bits (97), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 128 RVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
++R + DGGD+ DGIV + ++G C+GCP + TLK + L V +K +
Sbjct: 14 KIREGLRVDGGDVELVDISDGIVTVRLQGHCAGCPFSQMTLKNFIEKELVKSVAGIKGVV 73
Query: 188 TV 189
+V
Sbjct: 74 SV 75
>gi|165909938|gb|ABY73882.1| thioredoxin-like protein [Flammeovirga yaeyamensis]
Length = 233
Score = 42.0 bits (97), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D++V + I VL + + P +A GG+ ++ L G C GC + TL
Sbjct: 141 DASVEEHITYVLQSEINPGLAGHGGNCALVEVKEDPEKGLTAVLKFGGGCQGCSAIDITL 200
Query: 169 KYGVANILNHFVPEVKDI 186
K GV L +PE+ ++
Sbjct: 201 KQGVETTLKQHIPELMNV 218
>gi|189424665|ref|YP_001951842.1| Fe-S cluster assembly protein NifU [Geobacter lovleyi SZ]
gi|189420924|gb|ACD95322.1| Fe-S cluster assembly protein NifU [Geobacter lovleyi SZ]
Length = 288
Score = 42.0 bits (97), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
S+ +Q ++EVL+ +RP + DGGD+ V ++ R AC+GC S+ T K+
Sbjct: 211 SNLKKMQLVQEVLERDIRPMLRADGGDLELIDIDGDHVQIAFRKACAGCASSGNTAKF 268
>gi|332674262|gb|AEE71079.1| NifU family protein [Helicobacter pylori 83]
Length = 89
Score = 42.0 bits (97), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
IE +Q+ V+ ++RP + +DGG+I G + +++++ GAC C S+ TLK
Sbjct: 1 MIEFSDEDLQKPVRVVIEKIRPYLLKDGGNIEVLGVKSMKIYVTLEGACKTCSSSKITLK 60
>gi|319952564|ref|YP_004163831.1| nitrogen-fixing nifu domain-containing protein [Cellulophaga
algicola DSM 14237]
gi|319421224|gb|ADV48333.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga
algicola DSM 14237]
Length = 79
Score = 42.0 bits (97), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 128 RVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+RP + DGGDI D V + + GAC GC TLK GV + + P+++++
Sbjct: 16 EIRPFLQSDGGDISLVSIDNDTSVKVRLEGACIGCTVNQMTLKSGVEMTIKKYAPQIEEV 75
>gi|33151606|ref|NP_872959.1| putative DNA uptake protein [Haemophilus ducreyi 35000HP]
gi|51701995|sp|Q7VNV0|NFUA_HAEDU RecName: Full=Fe/S biogenesis protein nfuA
gi|33147826|gb|AAP95348.1| transformation locus protein OrfG-like protein [Haemophilus ducreyi
35000HP]
Length = 199
Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
I D+ ++R+ V+ +V P +A GG + + D L G C+GC TLK
Sbjct: 108 IADDAPFIERLDYVIQTQVNPQLASHGGQVTLIEVTEDKYAILQFGGGCNGCSMVDVTLK 167
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L F E+K ++ V
Sbjct: 168 EGIEKQLLATFPTELKGVKDV 188
>gi|294678787|ref|YP_003579402.1| nitrogen fixation protein NifU [Rhodobacter capsulatus SB 1003]
gi|1709289|sp|Q07178|NIFU1_RHOCA RecName: Full=Nitrogen fixation protein nifU 1
gi|297917|emb|CAA48486.1| nifU (copyI) [Rhodobacter capsulatus]
gi|294477607|gb|ADE86995.1| nitrogen fixation protein NifU-2 [Rhodobacter capsulatus SB 1003]
Length = 135
Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
V RI+ ++D +RP RDGGDI V + + GAC+GC A +TL YGV
Sbjct: 63 VTRIRALIDE-MRPTFRRDGGDIELVRVEGAKVIVHLSGACAGCMLAGQTL-YGVQK 117
>gi|226952464|ref|ZP_03822928.1| DNA uptake protein [Acinetobacter sp. ATCC 27244]
gi|294649752|ref|ZP_06727157.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|226836786|gb|EEH69169.1| DNA uptake protein [Acinetobacter sp. ATCC 27244]
gi|292824361|gb|EFF83159.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 212
Score = 42.0 bits (97), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGIV-FLSMRGACSGCPSASETL 168
D+++ +RI +L + + P +A GG+ V + G+ L G C GC + TL
Sbjct: 120 DASIEERITYILQSEINPGLAGHGGNCSLVEVQEDAEHGLTAVLKFGGGCQGCSAIDVTL 179
Query: 169 KYGVANILNHFVPEVKDI 186
K GV L +PE++ +
Sbjct: 180 KQGVETTLRQHIPELQRV 197
>gi|255030011|ref|ZP_05301962.1| hypothetical protein LmonL_14764 [Listeria monocytogenes LO28]
Length = 61
Score = 42.0 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 131 PAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
P + RDGGD + + +DGIV + + GAC CPS+ TLK G+ L + K++ V
Sbjct: 1 PFLVRDGGDYELIEVTQDGIVKIKLLGACETCPSSDMTLKMGIELTLAEKIIGFKEVVQV 60
>gi|183981881|ref|YP_001850172.1| hypothetical protein MMAR_1868 [Mycobacterium marinum M]
gi|183175207|gb|ACC40317.1| conserved hypothetical protein [Mycobacterium marinum M]
Length = 324
Score = 42.0 bits (97), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDI----VFKGYR-DGIVFLSMRGACSGCPSASETLKYG 171
V +R+ + LD VRP + GGD+ V G D V L+ G+C CPS++ TL+
Sbjct: 106 VHRRVSDALDG-VRPYLGSHGGDVELIDVVTGRSGDITVRLAFTGSCKSCPSSAVTLELA 164
Query: 172 VANILNHFVPEVKDIRTV 189
V + + PE+ I V
Sbjct: 165 VQDAVRAAAPEISAIEVV 182
>gi|293608910|ref|ZP_06691213.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829483|gb|EFF87845.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325121322|gb|ADY80845.1| putative membrane-bound protein in GNT I transport system (GntY)
[Acinetobacter calcoaceticus PHEA-2]
Length = 212
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI +L + P +A GG+ +D L G C GC + TL
Sbjct: 120 DASIEERITYILQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLKFGGGCQGCSAIDVTL 179
Query: 169 KYGVANILNHFVPEVKDI 186
K GV L +PE++ +
Sbjct: 180 KQGVETTLRENIPELQRV 197
>gi|261839079|gb|ACX98844.1| hypothetical protein HPKB_0231 [Helicobacter pylori 52]
Length = 326
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 103 DDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVF---KGYRDGI-VFLSMR 155
D SG+ + +VQ+IK +V++ +RP + DGGD+ K D I V++
Sbjct: 233 DKSQSGELAFREMTMVQKIKAVDKVIEENIRPMLMMDGGDLEILDIKESDDYIDVYIRYM 292
Query: 156 GACSGCPSASETLKYGVANILNHFV 180
GAC GC SA+ + + N L +
Sbjct: 293 GACDGCMSATTGTLFAIENALQELL 317
>gi|283955341|ref|ZP_06372840.1| nifU-like protein [Campylobacter jejuni subsp. jejuni 414]
gi|283793101|gb|EFC31871.1| nifU-like protein [Campylobacter jejuni subsp. jejuni 414]
Length = 323
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGI-VFLSMRGACSGCPSASETLKYGV 172
++ ++ VLD +RP + DGGD+ + K I V++ GACSGC S S Y +
Sbjct: 247 LKAVESVLDAEIRPMLHNDGGDLEVIDIQKAESAAIDVYIRYLGACSGCSSGSGATLYAI 306
Query: 173 ANILNH 178
IL
Sbjct: 307 ETILQE 312
>gi|11498240|ref|NP_069466.1| nifU protein (nifU-3) [Archaeoglobus fulgidus DSM 4304]
gi|2649997|gb|AAB90617.1| nifU protein (nifU-3) [Archaeoglobus fulgidus DSM 4304]
Length = 77
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDG--IVFLSMRGACSGCPSASETLKYGVANIL 176
++++EV++ +RPA+ RDGG+I +G V + + GAC GCP + TL V L
Sbjct: 5 EKVEEVVEKDIRPALMRDGGNIAVVDVDEGSGTVKVQLLGACGGCPMSMITLTSFVERYL 64
Query: 177 N 177
Sbjct: 65 R 65
>gi|237750884|ref|ZP_04581364.1| predicted protein [Helicobacter bilis ATCC 43879]
gi|229373329|gb|EEO23720.1| predicted protein [Helicobacter bilis ATCC 43879]
Length = 324
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIV---FKGYRDGIVFLSMR--GACSGCPSASETLKYGV 172
V+ I +V+D +RP + DGGD+ K DG + + +R GACSGC S + Y +
Sbjct: 248 VKAIDKVIDANIRPMLMMDGGDMEILDIKDTSDGFIDVYIRYLGACSGCASGATGTLYAI 307
Query: 173 ANILNH 178
++L
Sbjct: 308 ESVLQE 313
>gi|220934655|ref|YP_002513554.1| nitrogen-fixing NifU domain protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219995965|gb|ACL72567.1| nitrogen-fixing NifU domain protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 281
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
D AVV+ E R + +DGGDI F D V + ++GAC GCP ++ L+ V
Sbjct: 209 DEAVVREAVE----EARKILMQDGGDIEFVAIEDRTVRVRLKGACVGCPRSTLDLRNVVE 264
Query: 174 NILNHFVPEVKDI 186
++ P V +
Sbjct: 265 RLVRSRAPGVARV 277
>gi|271965282|ref|YP_003339478.1| hypothetical protein Sros_3815 [Streptosporangium roseum DSM 43021]
gi|270508457|gb|ACZ86735.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
Length = 186
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 97 LGDMKLDDMGSGDFIESDS---AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFL 152
L + DD+ SG + D + +R++ LD VRP + G + G + G+V L
Sbjct: 64 LHRLATDDLVSGLLVLHDLHPLSTAERVRAALDA-VRPQLGLHEGGVELLGVDETGVVRL 122
Query: 153 SMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
++G C GCPS+ + V + PEV +
Sbjct: 123 RLQGTCRGCPSSQLAVTSAVERAVLQAAPEVSGV 156
>gi|261838766|gb|ACX98532.1| nifU-like protein [Helicobacter pylori 51]
Length = 89
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
IE +Q+ V+ ++RP + +DGG+I G + +++++ GAC C S+ TLK
Sbjct: 1 MIEFSDEDLQKPVRVVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLK 60
>gi|15614281|ref|NP_242584.1| hypothetical protein BH1718 [Bacillus halodurans C-125]
gi|10174335|dbj|BAB05437.1| BH1718 [Bacillus halodurans C-125]
Length = 380
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
M IQ+ E TP+P T+K Q + + +++ + E P ++F I G+ VY D
Sbjct: 1 MNIQSIEPTPSPNTMKLTLDQTLPQGKSNNYTLKNKEEAPPFIQKLFEIEGVKGVYHVAD 60
Query: 60 FITVGKD-QYDWEHLRPPV 77
F+ + ++ + DW+ + P V
Sbjct: 61 FLAIERNAKVDWKVILPKV 79
>gi|146281734|ref|YP_001171887.1| Fe-S cluster assembly protein NifU [Pseudomonas stutzeri A1501]
gi|145569939|gb|ABP79045.1| Fe-S cluster assembly protein NifU [Pseudomonas stutzeri A1501]
Length = 316
Score = 41.6 bits (96), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
++RI+ VL++ +RP + RD GD+ +++ + GAC+GC AS TL
Sbjct: 236 IRRIERVLES-IRPTLQRDHGDVELLDVEGKNIYVKLTGACTGCQMASMTL 285
>gi|217033876|ref|ZP_03439300.1| hypothetical protein HP9810_870g8 [Helicobacter pylori 98-10]
gi|216943639|gb|EEC23084.1| hypothetical protein HP9810_870g8 [Helicobacter pylori 98-10]
gi|315585879|gb|ADU40260.1| NifU family protein [Helicobacter pylori 35A]
gi|317178197|dbj|BAJ55986.1| conserved hypothetical nifU-like protein [Helicobacter pylori F16]
gi|317179669|dbj|BAJ57457.1| conserved hypothetical nifU-like protein [Helicobacter pylori F30]
Length = 89
Score = 41.6 bits (96), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
IE +Q+ V+ ++RP + +DGG+I G + +++++ GAC C S+ TLK
Sbjct: 1 MIEFSDEDLQKPVRVVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLK 60
>gi|26553528|ref|NP_757462.1| nitrogen fixation protein [Mycoplasma penetrans HF-2]
gi|26453534|dbj|BAC43866.1| nitrogen fixation protein [Mycoplasma penetrans HF-2]
Length = 83
Score = 41.6 bits (96), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGV 172
+ ++ IK+V+D+ +R + +DGGD+ F Y G V + + G C GC T K G+
Sbjct: 7 NKIIDEIKDVIDS-IRFYINQDGGDLEFVDYNPEKGEVTIKILGECIGCSLIDVTYKEGL 65
Query: 173 ANILNHFVPEVKDI 186
IL + V VK +
Sbjct: 66 ETILKNEVEGVKSV 79
>gi|119946808|ref|YP_944488.1| putative DNA uptake protein [Psychromonas ingrahamii 37]
gi|150383446|sp|A1SZH4|NFUA_PSYIN RecName: Full=Fe/S biogenesis protein nfuA
gi|119865412|gb|ABM04889.1| HesB/YadR/YfhF-family protein [Psychromonas ingrahamii 37]
Length = 193
Score = 41.6 bits (96), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
++ D+ +++R++ V+ ++ P +A GG I + + D + + G C+GC TLK
Sbjct: 101 VKDDAPLLERVEYVIQVQINPQLASHGGFIKLIEITEDNVAIIEFGGGCNGCSQVDLTLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
GV +++ F E+ +R +
Sbjct: 161 QGVEKELIDEFSGELNAVRDI 181
>gi|218246101|ref|YP_002371472.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
8801]
gi|218166579|gb|ACK65316.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 8801]
Length = 289
Score = 41.6 bits (96), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILN 177
+RI++ L+ VRP + GD+ + V + + G CS CP+++ T+K GV +
Sbjct: 97 ERIQQALET-VRPGLKSHHGDVELVAIKFPDTVEVRLIGTCSNCPASTLTMKQGVEQAIK 155
Query: 178 HFVPEV 183
+ PE+
Sbjct: 156 TYCPEI 161
>gi|257059152|ref|YP_003137040.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 8802]
gi|256589318|gb|ACV00205.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 8802]
Length = 289
Score = 41.6 bits (96), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILN 177
+RI++ L+ VRP + GD+ + V + + G CS CP+++ T+K GV +
Sbjct: 97 ERIQQALET-VRPGLKSHHGDVELVAIKFPDTVEVRLIGTCSNCPASTLTMKQGVEQAIK 155
Query: 178 HFVPEV 183
+ PE+
Sbjct: 156 TYCPEI 161
>gi|207092082|ref|ZP_03239869.1| nifU-like protein [Helicobacter pylori HPKX_438_AG0C1]
Length = 326
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIV---FKGYRDGI-VFLSMRGACS 159
+G+ + +VQ+IK +V+D +RP + DGGD+ K D I V++ GAC
Sbjct: 237 NGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|210134422|ref|YP_002300861.1| nifu-like protein [Helicobacter pylori P12]
gi|210132390|gb|ACJ07381.1| nifu-like protein [Helicobacter pylori P12]
Length = 326
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIV---FKGYRDGI-VFLSMRGACS 159
+G+ + +VQ+IK +V+D +RP + DGGD+ K D I V++ GAC
Sbjct: 237 NGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|326795571|ref|YP_004313391.1| Fe/S biogenesis protein nfuA [Marinomonas mediterranea MMB-1]
gi|326546335|gb|ADZ91555.1| Fe/S biogenesis protein nfuA [Marinomonas mediterranea MMB-1]
Length = 193
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ DS + +I VL + V P +A GG++ + + G+ L G C GC + TLK
Sbjct: 103 VTPDSPIEDQINYVLYSDVNPGLAAHGGEVKLVEVIEGGVAVLQFGGGCQGCSAVDLTLK 162
Query: 170 YGVANILNHFVPEVKDIR 187
GV L VP + ++
Sbjct: 163 EGVEKTLIEKVPGLTAVK 180
>gi|167041225|gb|ABZ05982.1| putative NifU-like domain protein [uncultured marine microorganism
HF4000_001N02]
Length = 79
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 124 VLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEV 183
++ + V P VA GG + G DG ++ G C GC TLK GV ++ VP +
Sbjct: 3 IIASEVNPVVASHGGHVDLIGVDDGKAIIAFGGGCQGCGMVDVTLKQGVEVMIKDSVPGI 62
Query: 184 KDI 186
++
Sbjct: 63 SEV 65
>gi|332289242|ref|YP_004420094.1| putative DNA uptake protein [Gallibacterium anatis UMN179]
gi|330432138|gb|AEC17197.1| putative DNA uptake protein [Gallibacterium anatis UMN179]
Length = 194
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ V+ ++ P +A GG I D G L G C+GC TLK
Sbjct: 103 VADDAPLIERVEYVIQTQINPQLANHGGRITLIEITDKGEAILQFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
GV +L F E+ ++ V
Sbjct: 163 DGVEKQLLAQFEGELTGVKDV 183
>gi|95928565|ref|ZP_01311312.1| nitrogen-fixing NifU-like [Desulfuromonas acetoxidans DSM 684]
gi|95135355|gb|EAT17007.1| nitrogen-fixing NifU-like [Desulfuromonas acetoxidans DSM 684]
Length = 323
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 118 VQRIKEVLDNRVRPAVARDGG----DIVFKGYRDGIVFLSM--RGACSGCP-SASETLKY 170
V+ I+ VLD VRPA+A DGG D V G DG V++ + +GAC GC S + TL +
Sbjct: 246 VKEIEAVLDRHVRPALAGDGGGIELDDVQPGENDGQVYVHVKYKGACKGCAGSVAGTLGF 305
Query: 171 GVANILNHFVPEVKDIRTV 189
V +L + E IR V
Sbjct: 306 -VQTMLQENLSEA--IRVV 321
>gi|317012066|gb|ADU82674.1| nifu-like protein [Helicobacter pylori Lithuania75]
Length = 326
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIV---FKGYRDGI-VFLSMRGACS 159
+G+ + +VQ+IK +V+D +RP + DGGD+ K D I V++ GAC
Sbjct: 237 NGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|118340528|gb|ABK80578.1| putative nifU domain protein [uncultured marine Nitrospinaceae
bacterium]
Length = 92
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYF----GY 58
+ E TPN LKF Q +L G F++ +EA+ P+A++IF+ +ASV+
Sbjct: 5 VTVETTPNEHALKFSVNQQILDSGYKTFNSLEEAKDFPVAAKIFANEAVASVFVMAQPSS 64
Query: 59 DFITVGKD-QYDWEHLRPPVL 78
FITV K + W L+ ++
Sbjct: 65 AFITVTKKPETSWGDLQNKIV 85
>gi|319651240|ref|ZP_08005370.1| YpgR protein [Bacillus sp. 2_A_57_CT2]
gi|317397020|gb|EFV77728.1| YpgR protein [Bacillus sp. 2_A_57_CT2]
Length = 377
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I + + + A ++ K+ + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILDEELPMGKANNYKKEKKEGAPKIILDILEIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHLRPPV 77
+ +YDW+ L P V
Sbjct: 67 NAKYDWKELLPQV 79
>gi|290791697|gb|EFD95356.1| hypothetical protein GL50803_32838 [Giardia lamblia ATCC 50803]
Length = 197
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 118 VQRIKEVL-DNRVRPAVARDGGDIVFKGY----RDGIVFLSMRGACSGCPSASETLKYGV 172
++R E+L + P +ARDGG ++ + + +V++ + G CSGC ++ T+ V
Sbjct: 119 IRRASELLIRAAINPFLARDGGSCSYRRHEVTDKGLVVYIELHGNCSGCSKSTTTMNTFV 178
Query: 173 ANILNHFVPEVKDIR 187
++P++ +R
Sbjct: 179 IGEFKKYIPDIHTVR 193
>gi|113461632|ref|YP_719701.1| putative DNA uptake protein [Haemophilus somnus 129PT]
gi|170718659|ref|YP_001783854.1| DNA uptake protein [Haemophilus somnus 2336]
gi|119370610|sp|Q0I5I6|NFUA_HAES1 RecName: Full=Fe/S biogenesis protein nfuA
gi|189041725|sp|B0URV5|NFUA_HAES2 RecName: Full=Fe/S biogenesis protein nfuA
gi|112823675|gb|ABI25764.1| conserved hypothetical protein [Haemophilus somnus 129PT]
gi|168826788|gb|ACA32159.1| HesB/YadR/YfhF-family protein [Haemophilus somnus 2336]
Length = 193
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ + ++ P +A GG I + +DG L G C+GC TLK
Sbjct: 102 VADDAPLIERVEYAIQTQINPQLAGHGGHITLIEITKDGKAILQFGGGCNGCSMVDVTLK 161
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L F E+ ++ V
Sbjct: 162 DGIEKQLLAMFADELTGVKDV 182
>gi|172036772|ref|YP_001803273.1| NifU-like protein [Cyanothece sp. ATCC 51142]
gi|171698226|gb|ACB51207.1| NifU-like protein [Cyanothece sp. ATCC 51142]
Length = 286
Score = 41.2 bits (95), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILN 177
+R+++ L VRP + GD+ + V + + G CS CP+++ T+K G+ +
Sbjct: 95 KRLEQALAT-VRPGLKSHHGDVELVAIKLPNTVEVKLVGTCSNCPASTLTMKQGIEQAIK 153
Query: 178 HFVPEVKDIRTV 189
+ PE+ ++ +V
Sbjct: 154 TYCPEITNVISV 165
>gi|260913511|ref|ZP_05919989.1| Fe/S-biogenesis protein NfuA [Pasteurella dagmatis ATCC 43325]
gi|260632451|gb|EEX50624.1| Fe/S-biogenesis protein NfuA [Pasteurella dagmatis ATCC 43325]
Length = 194
Score = 41.2 bits (95), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ V+ ++ P +A GG I + +G L G C+GC TLK
Sbjct: 103 VADDAPLIERVEYVIQTQINPQLASHGGKITLIEITNEGYAILQFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L+ F E+K + V
Sbjct: 163 DGIEKQLLSLFPNELKGAKDV 183
>gi|217034049|ref|ZP_03439471.1| hypothetical protein HP9810_891g53 [Helicobacter pylori 98-10]
gi|216943557|gb|EEC23008.1| hypothetical protein HP9810_891g53 [Helicobacter pylori 98-10]
Length = 326
Score = 41.2 bits (95), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVF---KGYRDGI-VFLSMRGACS 159
SG+ + +VQ+IK +V++ +RP + DGGD+ K D I V++ GAC
Sbjct: 237 SGELAFREMTMVQKIKAVDKVIEENIRPMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|242373742|ref|ZP_04819316.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W1]
gi|242348562|gb|EES40164.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W1]
Length = 84
Score = 41.2 bits (95), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 7 DTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK- 65
+TPN T+K + + +++AKE + +R+F I G+ S+++ DFI+V K
Sbjct: 8 ETPNHNTMKISLSEPRQDNSSTTYTSAKEGQ-PDFINRLFEIDGVKSIFYVMDFISVDKE 66
Query: 66 DQYDWEHLRPPVLGMIME 83
D +W+ L P + E
Sbjct: 67 DDANWDDLLPQIQDAFNE 84
>gi|332299648|ref|YP_004441569.1| nitrogen-fixing NifU domain-containing protein [Porphyromonas
asaccharolytica DSM 20707]
gi|332176711|gb|AEE12401.1| nitrogen-fixing NifU domain-containing protein [Porphyromonas
asaccharolytica DSM 20707]
Length = 97
Score = 41.2 bits (95), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
S+ V I ++ + VRP + GGDI VF+ + G+C CPS S T++ V
Sbjct: 5 SSRVDEITTIISSYVRPQLQAHGGDIALLRVAGEQVFVKVSGSCQACPSLSSTIREVVQE 64
Query: 175 ILN 177
L
Sbjct: 65 TLR 67
>gi|29840661|ref|NP_829767.1| nifU protein, putative [Chlamydophila caviae GPIC]
gi|29835011|gb|AAP05645.1| nifU protein, putative [Chlamydophila caviae GPIC]
Length = 273
Score = 41.2 bits (95), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q ++ ++++ P VA DGG ++ + IV ++ G CSGC SA + + +L
Sbjct: 186 LQVLRTTAEDKISPYVAMDGGSVLIENLEGNIVTIAYAGNCSGCFSAIGSTLNSIGQLLR 245
Query: 178 HFV 180
+V
Sbjct: 246 AYV 248
>gi|261840168|gb|ACX99933.1| NifU-like protein [Helicobacter pylori 52]
gi|317182697|dbj|BAJ60481.1| conserved hypothetical nifU-like protein [Helicobacter pylori F57]
Length = 89
Score = 41.2 bits (95), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
IE +Q+ ++ ++RP + +DGG+I G + +++++ GAC C S+ TLK
Sbjct: 1 MIEFSDEDLQKPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLK 60
>gi|317177038|dbj|BAJ54827.1| nifU-like protein [Helicobacter pylori F16]
Length = 326
Score = 41.2 bits (95), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVF---KGYRDGI-VFLSMRGACS 159
SG+ + +VQ+IK +V++ +RP + DGGD+ K D I V++ GAC
Sbjct: 237 SGELAFREMTMVQKIKAVDKVIEENIRPMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|186680893|ref|YP_001864089.1| Rieske (2Fe-2S) domain-containing protein [Nostoc punctiforme PCC
73102]
gi|186463345|gb|ACC79146.1| Rieske (2Fe-2S) domain protein [Nostoc punctiforme PCC 73102]
Length = 281
Score = 41.2 bits (95), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANI 175
+ QRI+ L+ VRP + GD+ + V + + G CS CP+++ TL GV
Sbjct: 85 LAQRIETALE-EVRPGLKSHDGDVELVAIKSPDTVEVRLIGTCSSCPASTLTLSQGVEQA 143
Query: 176 LNHFVPEVKDIRTV 189
+ + PE+ + V
Sbjct: 144 IKNHCPEITKVVAV 157
>gi|317180027|dbj|BAJ57813.1| nifU-like protein [Helicobacter pylori F32]
Length = 326
Score = 41.2 bits (95), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVF---KGYRDGI-VFLSMRGACS 159
SG+ + +VQ+IK +V++ +RP + DGGD+ K D I V++ GAC
Sbjct: 237 SGELAFREMTMVQKIKAVDKVIEENIRPMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|188528263|ref|YP_001910950.1| conserved hypothetical nifU-like protein [Helicobacter pylori
Shi470]
gi|308183595|ref|YP_003927722.1| conserved hypothetical nifU-like protein [Helicobacter pylori
PeCan4]
gi|188144503|gb|ACD48920.1| conserved hypothetical nifU-like protein [Helicobacter pylori
Shi470]
gi|297380653|gb|ADI35540.1| Hypothetical protein HPV225_1523 [Helicobacter pylori v225d]
gi|308062756|gb|ADO04644.1| conserved hypothetical nifU-like protein [Helicobacter pylori
Cuz20]
gi|308064252|gb|ADO06139.1| conserved hypothetical nifU-like protein [Helicobacter pylori
Sat464]
gi|308065780|gb|ADO07672.1| conserved hypothetical nifU-like protein [Helicobacter pylori
PeCan4]
gi|317181175|dbj|BAJ58961.1| conserved hypothetical nifU-like protein [Helicobacter pylori F32]
Length = 89
Score = 41.2 bits (95), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
IE +Q+ ++ ++RP + +DGG+I G + +++++ GAC C S+ TLK
Sbjct: 1 MIEFSDEDLQKPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLK 60
>gi|330827871|ref|YP_004390823.1| Fe/S biogenesis protein nfuA [Aeromonas veronii B565]
gi|328803007|gb|AEB48206.1| Fe/S biogenesis protein nfuA [Aeromonas veronii B565]
Length = 192
Score = 41.2 bits (95), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++RI+ VL + V P +A GG + + D + L G C+GC TLK
Sbjct: 101 VADDAPLIERIEYVLMSEVNPMLAGHGGKVTLVELTEDKLAILQFGGGCNGCSMVDYTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ ++
Sbjct: 161 EGIEKQLLEKFPGELNGVK 179
>gi|317179382|dbj|BAJ57170.1| nifU-like protein [Helicobacter pylori F30]
Length = 326
Score = 41.2 bits (95), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVF---KGYRDGI-VFLSMRGACS 159
SG+ + +VQ+IK +V++ +RP + DGGD+ K D I V++ GAC
Sbjct: 237 SGELAFREMTMVQKIKAVDKVIEENIRPMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|119509243|ref|ZP_01628393.1| Nitrogen-fixing NifU-like protein [Nodularia spumigena CCY9414]
gi|119466085|gb|EAW46972.1| Nitrogen-fixing NifU-like protein [Nodularia spumigena CCY9414]
Length = 277
Score = 41.2 bits (95), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGV 172
+ +++RI L+ VRP + GD+ F + V + + G+CS CP+++ TL V
Sbjct: 82 QAPLIERINTALE-EVRPGLKSHDGDVEFVAIKPPDTVEVKLIGSCSSCPTSTLTLTQSV 140
Query: 173 ANILNHFVPEVKDIRTV 189
+ + PE+ + V
Sbjct: 141 EQAIKNHCPEITKVVAV 157
>gi|220904348|ref|YP_002479660.1| Fe-S cluster assembly protein NifU [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868647|gb|ACL48982.1| Fe-S cluster assembly protein NifU [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 278
Score = 41.2 bits (95), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 118 VQRIKEVL---DNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
VQR++ VL + +RP +A DGGDI V +S+RG CS C ++ T++ V
Sbjct: 204 VQRMQLVLKTIEEEIRPVLAADGGDIELVDVDGLRVVVSLRGRCSQCRASDVTIRDLVQR 263
Query: 175 IL-NHFVPEV 183
+L H P++
Sbjct: 264 LLREHVEPDI 273
>gi|34558480|ref|NP_908295.1| NIFU-like protein [Wolinella succinogenes DSM 1740]
gi|34484199|emb|CAE11195.1| NIFU-LIKE PROTEIN [Wolinella succinogenes]
Length = 327
Score = 41.2 bits (95), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 101 KLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGD---IVFKGYRDGIVFLSM 154
+ D SG+ ++ ++VQ++K +V+D+ +RP + DGG+ I + DG + +
Sbjct: 231 QADKSASGELGFNEMSMVQKVKAVDKVIDDNIRPMLMMDGGNMEVIDIRSSSDGHTDIYI 290
Query: 155 R--GACSGCPSASETLKYGVANILNH 178
R GAC+GC S+S + + ++L
Sbjct: 291 RYVGACAGCASSSTGTLFAIESVLQQ 316
>gi|51701987|sp|Q7MPY4|NFUA_VIBVY RecName: Full=Fe/S biogenesis protein nfuA
gi|51702011|sp|Q8DDU2|NFUA_VIBVU RecName: Full=Fe/S biogenesis protein nfuA
Length = 194
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ + +V P +A GG + D G+ ++ G C+GC TLK
Sbjct: 103 VADDAPLLERVEYAIQTQVNPQLAGHGGHVKLMEITDAGVAIVAFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 163 EGIEKELLQQFSGELTAVR 181
>gi|323697813|ref|ZP_08109725.1| Fe-S cluster assembly protein NifU [Desulfovibrio sp. ND132]
gi|323457745|gb|EGB13610.1| Fe-S cluster assembly protein NifU [Desulfovibrio desulfuricans
ND132]
Length = 284
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 118 VQR---IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+QR I+ V+D VRP + DGG+I V + G CSGCPS+ TL+ V
Sbjct: 210 IQRMHLIERVIDEDVRPKLKADGGNIELVDIDRDAVVVRFLGMCSGCPSSRATLEGLVET 269
Query: 175 ILNHFV 180
L V
Sbjct: 270 ALREKV 275
>gi|262372009|ref|ZP_06065288.1| iron-sulfur cluster biosynthesis family protein [Acinetobacter
junii SH205]
gi|262312034|gb|EEY93119.1| iron-sulfur cluster biosynthesis family protein [Acinetobacter
junii SH205]
Length = 212
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI VL + + P + GG+ ++ L G C GC + TL
Sbjct: 120 DASIEERITYVLQSEINPGLEGHGGNCSLVEVQNDPEHGLTAVLKFGGGCQGCSAIDVTL 179
Query: 169 KYGVANILNHFVPEVKDI 186
K GV L VPE++ +
Sbjct: 180 KQGVETTLKQHVPELQRV 197
>gi|109948219|ref|YP_665447.1| hypothetical protein Hac_1752 [Helicobacter acinonychis str.
Sheeba]
gi|109715440|emb|CAK00448.1| conserved hypothetical protein [Helicobacter acinonychis str.
Sheeba]
Length = 89
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 128 RVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
++RP + +DGG+I G + +++++ GAC C S+ TLK
Sbjct: 19 KIRPYLLKDGGNIEVLGIKSMKIYVTLEGACKTCSSSKITLK 60
>gi|86153596|ref|ZP_01071799.1| NifU family protein [Campylobacter jejuni subsp. jejuni HB93-13]
gi|85842557|gb|EAQ59769.1| NifU family protein [Campylobacter jejuni subsp. jejuni HB93-13]
Length = 323
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGI-VFLSMRGACSGCPSASETLKYGV 172
++ ++ VLD +RP + DGGD+ + K I V++ GACSGC S S Y +
Sbjct: 247 LKAVESVLDAEIRPMLHNDGGDLEVIDIQKAEGAAIDVYIRYLGACSGCSSGSGATLYAI 306
Query: 173 ANILNH 178
IL
Sbjct: 307 ETILQE 312
>gi|283955663|ref|ZP_06373156.1| nifU-like protein [Campylobacter jejuni subsp. jejuni 1336]
gi|283792888|gb|EFC31664.1| nifU-like protein [Campylobacter jejuni subsp. jejuni 1336]
Length = 323
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGI-VFLSMRGACSGCPSASETLKYGV 172
++ ++ VLD +RP + DGGD+ + K I V++ GACSGC S S Y +
Sbjct: 247 LKAVESVLDAEIRPMLHNDGGDLEVIDIQKAEGAAIDVYIRYLGACSGCSSGSGATLYAI 306
Query: 173 ANILNH 178
IL
Sbjct: 307 ETILQE 312
>gi|57237299|ref|YP_178312.1| NifU family protein [Campylobacter jejuni RM1221]
gi|88597232|ref|ZP_01100467.1| NifU family protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|121613377|ref|YP_999952.1| NifU family protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|157414537|ref|YP_001481793.1| NifU family protein [Campylobacter jejuni subsp. jejuni 81116]
gi|167004909|ref|ZP_02270667.1| nifU-like protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|205356531|ref|ZP_03223294.1| NifU protein [Campylobacter jejuni subsp. jejuni CG8421]
gi|218561903|ref|YP_002343682.1| NifU protein [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|57166103|gb|AAW34882.1| NifU family protein [Campylobacter jejuni RM1221]
gi|87250262|gb|EAQ73220.1| NifU family protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|88190293|gb|EAQ94267.1| NifU family protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|112359609|emb|CAL34394.1| NifU protein homolog [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|157385501|gb|ABV51816.1| nifU-like protein [Campylobacter jejuni subsp. jejuni 81116]
gi|205345536|gb|EDZ32176.1| NifU protein [Campylobacter jejuni subsp. jejuni CG8421]
gi|284925515|gb|ADC27867.1| NifU family protein [Campylobacter jejuni subsp. jejuni IA3902]
gi|307747179|gb|ADN90449.1| NifU family protein [Campylobacter jejuni subsp. jejuni M1]
gi|315928167|gb|EFV07485.1| nitrogen fixation protein nifU [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315932037|gb|EFV10990.1| Nitrogen fixation protein NifU [Campylobacter jejuni subsp. jejuni
327]
Length = 323
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGI-VFLSMRGACSGCPSASETLKYGV 172
++ ++ VLD +RP + DGGD+ + K I V++ GACSGC S S Y +
Sbjct: 247 LKAVESVLDAEIRPMLHNDGGDLEVIDIQKAEGAAIDVYIRYLGACSGCSSGSGATLYAI 306
Query: 173 ANILNH 178
IL
Sbjct: 307 ETILQE 312
>gi|223043286|ref|ZP_03613333.1| conserved virulence factor C [Staphylococcus capitis SK14]
gi|314933620|ref|ZP_07840985.1| scaffold protein Nfu/NifU N [Staphylococcus caprae C87]
gi|222443497|gb|EEE49595.1| conserved virulence factor C [Staphylococcus capitis SK14]
gi|313653770|gb|EFS17527.1| scaffold protein Nfu/NifU N [Staphylococcus caprae C87]
Length = 84
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 7 DTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK- 65
+TPN T+K + + +++AKE + +R+F I G+ S+++ DFI+V K
Sbjct: 8 ETPNHNTMKISLSEPRQDNSSTTYTSAKEGQ-PEFINRLFDIDGVKSIFYVMDFISVDKE 66
Query: 66 DQYDWEHLRPPV 77
D +W+ L P +
Sbjct: 67 DDANWDDLLPQI 78
>gi|327479981|gb|AEA83291.1| Fe-S cluster assembly protein NifU [Pseudomonas stutzeri DSM 4166]
Length = 316
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
++R++ VL++ +RP + RD GD+ +++ + GAC+GC AS TL
Sbjct: 236 IRRVERVLES-IRPTLQRDHGDVELLDVEGKNIYVKLTGACTGCQMASMTL 285
>gi|261884718|ref|ZP_06008757.1| nitrogen fixation protein NifU [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 162
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGIVFLSMR--GACSGCPSASETLKYG 171
++ ++ V+D +RP + DGG++ + K DG + + +R GACSGC S + Y
Sbjct: 85 LKAVEAVIDENIRPMLVMDGGNMEILDIKKEDADGKIDIYIRYLGACSGCASGATGTLYA 144
Query: 172 VANILN-HFVPEVK 184
+ NIL + P ++
Sbjct: 145 IENILQENLSPNIR 158
>gi|229496013|ref|ZP_04389737.1| NifU-related protein [Porphyromonas endodontalis ATCC 35406]
gi|229317105|gb|EEN83014.1| NifU-related protein [Porphyromonas endodontalis ATCC 35406]
Length = 104
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
++EVL+ RV P +A GG + +G + ++ +GAC+ CPS +ET+ V L
Sbjct: 8 VQEVLETRVAPQLALHGGGVKLCSISPEGDIRVAFKGACATCPSMTETMDALVMGQLRAA 67
Query: 180 VPEV 183
P+
Sbjct: 68 FPDT 71
>gi|229085150|ref|ZP_04217397.1| hypothetical protein bcere0022_17700 [Bacillus cereus Rock3-44]
gi|228698131|gb|EEL50869.1| hypothetical protein bcere0022_17700 [Bacillus cereus Rock3-44]
Length = 375
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + +I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENTEQAPEQVQQILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|229102807|ref|ZP_04233503.1| hypothetical protein bcere0019_19610 [Bacillus cereus Rock3-28]
gi|228680592|gb|EEL34773.1| hypothetical protein bcere0019_19610 [Bacillus cereus Rock3-28]
Length = 375
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLSSGARNNYTNENKEQAPVQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|27364312|ref|NP_759840.1| Fe/S biogenesis protein NfuA [Vibrio vulnificus CMCP6]
gi|320157704|ref|YP_004190083.1| NfuA Fe-S protein maturation [Vibrio vulnificus MO6-24/O]
gi|27360430|gb|AAO09367.1| Protein gntY [Vibrio vulnificus CMCP6]
gi|319933016|gb|ADV87880.1| NfuA, Fe-S protein maturation [Vibrio vulnificus MO6-24/O]
Length = 207
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ + +V P +A GG + D G+ ++ G C+GC TLK
Sbjct: 116 VADDAPLLERVEYAIQTQVNPQLAGHGGHVKLMEITDAGVAIVAFGGGCNGCSMVDVTLK 175
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 176 EGIEKELLQQFSGELTAVR 194
>gi|300785672|ref|YP_003765963.1| thioredoxin-like protein [Amycolatopsis mediterranei U32]
gi|299795186|gb|ADJ45561.1| thioredoxin-like protein [Amycolatopsis mediterranei U32]
Length = 174
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
R++ LD R+RP V G + + G DG+V LS+ GA GC SA+ T + V +
Sbjct: 88 RVRRALD-RIRPQV----GAVGYLGIDDGVVRLSL-GASRGCSSAARTARATVEAAVRDA 141
Query: 180 VPEVKDIRTV 189
PEV + V
Sbjct: 142 APEVSGVEIV 151
>gi|148926387|ref|ZP_01810071.1| nifU protein like protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145844779|gb|EDK21884.1| nifU protein like protein [Campylobacter jejuni subsp. jejuni
CG8486]
Length = 317
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGI-VFLSMRGACSGCPSASETLKYGV 172
++ ++ VLD +RP + DGGD+ + K I V++ GACSGC S S Y +
Sbjct: 241 LKAVESVLDAEIRPMLHNDGGDLEVIDIQKAEGAAIDVYIRYLGACSGCSSGSGATLYAI 300
Query: 173 ANILNH 178
IL
Sbjct: 301 ETILQE 306
>gi|313887418|ref|ZP_07821107.1| NifU-like protein [Porphyromonas asaccharolytica PR426713P-I]
gi|312923060|gb|EFR33880.1| NifU-like protein [Porphyromonas asaccharolytica PR426713P-I]
Length = 97
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
S+ V I ++ + VRP + GGDI VF+ + G+C CPS S T++ V
Sbjct: 5 SSRVDEITTIISSYVRPQLQAHGGDIALLRVAGEEVFVKVSGSCQACPSLSSTIREVVQE 64
Query: 175 ILN 177
L
Sbjct: 65 TLR 67
>gi|57168365|ref|ZP_00367499.1| nifU protein homolog Cj0239c [Campylobacter coli RM2228]
gi|305432781|ref|ZP_07401940.1| NifU family protein [Campylobacter coli JV20]
gi|57020173|gb|EAL56847.1| nifU protein homolog Cj0239c [Campylobacter coli RM2228]
gi|304444178|gb|EFM36832.1| NifU family protein [Campylobacter coli JV20]
Length = 323
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGI-VFLSMRGACSGCPSASETLKYGV 172
++ ++ VLD +RP + DGGD+ + K I V++ GACSGC S S Y +
Sbjct: 247 LKAVESVLDAEIRPMLHNDGGDLEVIDIQKAEGAAIDVYIRYLGACSGCSSGSGATLYAI 306
Query: 173 ANILNH 178
IL
Sbjct: 307 ETILQE 312
>gi|315928505|gb|EFV07809.1| nitrogen fixation protein nifU [Campylobacter jejuni subsp. jejuni
305]
Length = 286
Score = 40.8 bits (94), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGI-VFLSMRGACSGCPSASETLKYGV 172
++ ++ VLD +RP + DGGD+ + K I V++ GACSGC S S Y +
Sbjct: 210 LKAVESVLDAEIRPMLHNDGGDLEVIDIQKAEGAAIDVYIRYLGACSGCSSGSGATLYAI 269
Query: 173 ANILNH 178
IL
Sbjct: 270 ETILQE 275
>gi|86151274|ref|ZP_01069489.1| NifU family protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|315123826|ref|YP_004065830.1| NifU family protein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85841621|gb|EAQ58868.1| NifU family protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|315017548|gb|ADT65641.1| NifU family protein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 323
Score = 40.8 bits (94), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGI-VFLSMRGACSGCPSASETLKYGV 172
++ ++ VLD +RP + DGGD+ + K I V++ GACSGC S S Y +
Sbjct: 247 LKAVESVLDAEIRPMLHNDGGDLEVIDIQKAEGAAIDVYIRYLGACSGCSSGSGATLYAI 306
Query: 173 ANILNH 178
IL
Sbjct: 307 ETILQE 312
>gi|86149607|ref|ZP_01067837.1| NifU family protein [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85839875|gb|EAQ57134.1| NifU family protein [Campylobacter jejuni subsp. jejuni CF93-6]
Length = 323
Score = 40.8 bits (94), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGI-VFLSMRGACSGCPSASETLKYGV 172
++ ++ VLD +RP + DGGD+ + K I V++ GACSGC S S Y +
Sbjct: 247 LKAVESVLDAEIRPMLHNDGGDLEVIDIQKAEGAAIDVYIRYLGACSGCSSGSGATLYAI 306
Query: 173 ANILNH 178
IL
Sbjct: 307 ETILQE 312
>gi|15612450|ref|NP_224103.1| NifU-like protein [Helicobacter pylori J99]
gi|15646101|ref|NP_208283.1| NifU-like protein [Helicobacter pylori 26695]
gi|207092454|ref|ZP_03240241.1| NifU-like protein [Helicobacter pylori HPKX_438_AG0C1]
gi|208435360|ref|YP_002267026.1| conserved hypothetical nifU-like protein [Helicobacter pylori G27]
gi|210135659|ref|YP_002302098.1| nifu-like protein [Helicobacter pylori P12]
gi|217031837|ref|ZP_03437340.1| hypothetical protein HPB128_199g45 [Helicobacter pylori B128]
gi|254780002|ref|YP_003058109.1| putative nifU-like protein [Helicobacter pylori B38]
gi|298735538|ref|YP_003728059.1| thioredoxin-like protein [Helicobacter pylori B8]
gi|308185262|ref|YP_003929395.1| putative nifU-like protein [Helicobacter pylori SJM180]
gi|2314672|gb|AAD08534.1| conserved hypothetical nifU-like protein [Helicobacter pylori
26695]
gi|4156005|gb|AAD06966.1| putative [Helicobacter pylori J99]
gi|208433289|gb|ACI28160.1| conserved hypothetical nifU-like protein [Helicobacter pylori G27]
gi|210133627|gb|ACJ08618.1| nifu-like protein [Helicobacter pylori P12]
gi|216946489|gb|EEC25091.1| hypothetical protein HPB128_199g45 [Helicobacter pylori B128]
gi|254001915|emb|CAX30168.1| Putative nifU-like protein [Helicobacter pylori B38]
gi|298354723|emb|CBI65595.1| thioredoxin-like protein [Helicobacter pylori B8]
gi|307638148|gb|ADN80598.1| NifU like protein [Helicobacter pylori 908]
gi|308061182|gb|ADO03078.1| putative nifU-like protein [Helicobacter pylori SJM180]
gi|317010134|gb|ADU80714.1| putative nifU-like protein [Helicobacter pylori India7]
gi|317011627|gb|ADU85374.1| putative nifU-like protein [Helicobacter pylori SouthAfrica7]
gi|317013262|gb|ADU83870.1| putative nifU-like protein [Helicobacter pylori Lithuania75]
gi|317014907|gb|ADU82343.1| putative nifU-like protein [Helicobacter pylori Gambia94/24]
gi|325996747|gb|ADZ52152.1| NifU like protein [Helicobacter pylori 2018]
gi|325998342|gb|ADZ50550.1| NifU like protein [Helicobacter pylori 2017]
Length = 89
Score = 40.8 bits (94), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
IE +Q+ ++ ++RP + +DGG+I G + +++++ GAC C S+ TLK
Sbjct: 1 MIEFSDEDLQKPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLK 60
>gi|315930881|gb|EFV09868.1| nitrogen fixation protein nifU [Campylobacter jejuni subsp. jejuni
305]
Length = 323
Score = 40.8 bits (94), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGI-VFLSMRGACSGCPSASETLKYGV 172
++ ++ VLD +RP + DGGD+ + K I V++ GACSGC S S Y +
Sbjct: 247 LKAVESVLDAEIRPMLHNDGGDLEVIDIQKAEGAAIDVYIRYLGACSGCSSGSGATLYAI 306
Query: 173 ANILNH 178
IL
Sbjct: 307 ETILQE 312
>gi|228469892|ref|ZP_04054831.1| Fe-S cluster assembly protein NifU [Porphyromonas uenonis 60-3]
gi|228308527|gb|EEK17315.1| Fe-S cluster assembly protein NifU [Porphyromonas uenonis 60-3]
Length = 97
Score = 40.8 bits (94), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
S+ V I ++ + VRP + GGDI VF+ + G+C CPS S T++ V
Sbjct: 5 SSRVDEITTIISSYVRPQLLAHGGDIALLRVAGEQVFVKVSGSCQACPSLSSTIQEVVQE 64
Query: 175 ILN 177
L
Sbjct: 65 TLR 67
>gi|153951672|ref|YP_001397468.1| NifU family protein [Campylobacter jejuni subsp. doylei 269.97]
gi|152939118|gb|ABS43859.1| NifU family protein [Campylobacter jejuni subsp. doylei 269.97]
Length = 323
Score = 40.8 bits (94), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGI-VFLSMRGACSGCPSASETLKYGV 172
++ ++ VLD +RP + DGGD+ + K I V++ GACSGC S S Y +
Sbjct: 247 LKAVESVLDAEIRPMLHNDGGDLEVIDIQKAEGAAIDVYIRYLGACSGCSSGSGATLYAI 306
Query: 173 ANILNH 178
IL
Sbjct: 307 ETILQE 312
>gi|229544329|ref|ZP_04433388.1| HEAT domain containing protein [Bacillus coagulans 36D1]
gi|229325468|gb|EEN91144.1| HEAT domain containing protein [Bacillus coagulans 36D1]
Length = 374
Score = 40.8 bits (94), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K + + + ++ +E + P+ RI I G+ VY DF+ V +
Sbjct: 7 EPTPSPNTMKVVLTEALPDGARSNYKKGQEEGVPPVIRRILDIEGVKGVYHVADFLAVER 66
Query: 66 D-QYDWEHLRPPV 77
+ DW+ + P V
Sbjct: 67 HGKTDWQDILPKV 79
>gi|108563846|ref|YP_628162.1| NifU-like protein [Helicobacter pylori HPAG1]
gi|107837619|gb|ABF85488.1| conserved hypothetical nifU-like protein [Helicobacter pylori
HPAG1]
Length = 89
Score = 40.8 bits (94), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
IE +Q+ ++ ++RP + +DGG+I G + +++++ GAC C S+ TLK
Sbjct: 1 MIEFSDEDLQKPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLK 60
>gi|118474257|ref|YP_892817.1| nitrogen fixation protein NifU [Campylobacter fetus subsp. fetus
82-40]
gi|118413483|gb|ABK81903.1| nitrogen fixation protein NifU [Campylobacter fetus subsp. fetus
82-40]
Length = 333
Score = 40.8 bits (94), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGIVFLSMR--GACSGCPSASETLKYG 171
++ ++ V+D +RP + DGG++ + K DG + + +R GACSGC S + Y
Sbjct: 256 LKAVEAVIDENIRPMLVMDGGNMEILDIKKEDADGKIDIYIRYLGACSGCASGATGTLYA 315
Query: 172 VANILNH 178
+ NIL
Sbjct: 316 IENILQE 322
>gi|329943243|ref|ZP_08292017.1| nifU-like domain protein [Chlamydophila psittaci Cal10]
gi|332287822|ref|YP_004422723.1| putative NifU-related protein [Chlamydophila psittaci 6BC]
gi|313848394|emb|CBY17398.1| putative NifU-related protein [Chlamydophila psittaci RD1]
gi|325506999|gb|ADZ18637.1| putative NifU-related protein [Chlamydophila psittaci 6BC]
gi|328814790|gb|EGF84780.1| nifU-like domain protein [Chlamydophila psittaci Cal10]
gi|328915082|gb|AEB55915.1| NifU-like protein [Chlamydophila psittaci 6BC]
Length = 273
Score = 40.8 bits (94), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 35/63 (55%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ ++ + ++++ P VA DGG ++ + + +V ++ G CSGC SA + + +L
Sbjct: 186 LHALRTITEDKISPYVALDGGSVLIEKLEENVVTIAYAGNCSGCFSAIGSTLNSIGQLLR 245
Query: 178 HFV 180
+V
Sbjct: 246 AYV 248
>gi|219871269|ref|YP_002475644.1| putative DNA uptake protein [Haemophilus parasuis SH0165]
gi|219691473|gb|ACL32696.1| putative DNA uptake protein, cytoplasmic protein [Haemophilus
parasuis SH0165]
Length = 194
Score = 40.8 bits (94), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ ++R+ V+ +V P +A GG + + D L G C+GC TLK
Sbjct: 103 VADDAPFIERLDYVIQTQVNPQLASHGGRVTLIEVTEDKYAVLQFGGGCNGCSMVDVTLK 162
Query: 170 YGVANILNHFVPE----VKDI 186
G+ L PE VKD+
Sbjct: 163 EGIEKQLLALFPEELVGVKDV 183
>gi|15603422|ref|NP_246496.1| putative DNA uptake protein [Pasteurella multocida subsp. multocida
str. Pm70]
gi|51702139|sp|Q9CKP9|NFUA_PASMU RecName: Full=Fe/S biogenesis protein nfuA
gi|12721948|gb|AAK03641.1| OrfG [Pasteurella multocida subsp. multocida str. Pm70]
Length = 194
Score = 40.8 bits (94), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ V+ ++ P +A GG I + DG L G C+GC TLK
Sbjct: 103 VADDAPLLERVEYVIQTQINPQLAGHGGRITLIEITEDGYAILQFGGGCNGCSMVDVTLK 162
Query: 170 YGVANILNHFVP 181
G+ L P
Sbjct: 163 DGIEKQLLSLFP 174
>gi|257453557|ref|ZP_05618847.1| IscR-regulated protein YhgI [Enhydrobacter aerosaccus SK60]
gi|257449015|gb|EEV23968.1| IscR-regulated protein YhgI [Enhydrobacter aerosaccus SK60]
Length = 205
Score = 40.8 bits (94), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKG--YRDGI---VFLSMRGACSGCPSASETL 168
++++ +RI VL + + P +A GG++ + +G+ L G C GC + TL
Sbjct: 113 NASLEERINYVLSSEINPNLASHGGNVQLVDLVHEEGVGITAVLKFGGGCQGCSAVDMTL 172
Query: 169 KYGVANILNHFVPEVKDI 186
K GV L +PE+ +
Sbjct: 173 KQGVEVSLKQQIPELTQV 190
>gi|294498750|ref|YP_003562450.1| hypothetical protein BMQ_1987 [Bacillus megaterium QM B1551]
gi|294348687|gb|ADE69016.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 374
Score = 40.8 bits (94), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISP-LASRIFSIPGIASVYFGYDFITVG 64
E TP+P T+K I VL G + K AE +P + I + G+ VY DF+ V
Sbjct: 7 EPTPSPNTMK-INLDEVLSGGKSNNYTEKNAEAAPEVVQDILKVEGVKGVYHVADFLAVE 65
Query: 65 KD-QYDWEHLRPPVLGMIMEHFISG 88
++ +YDW+ + P V E S
Sbjct: 66 RNAKYDWKQILPQVRAAFGEDLQSN 90
>gi|84999846|ref|XP_954644.1| Nifu-like protein [Theileria annulata]
gi|65305642|emb|CAI73967.1| Nifu-like protein, putative [Theileria annulata]
Length = 150
Score = 40.8 bits (94), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ +++V D +RP ++ DGG I D +++ G+C GCP S TLK + + L
Sbjct: 73 TKNVEDVFD-LIRPQLSSDGGGINLCKIVDNEIYVKFTGSCVGCPYRSTTLKELIESNLV 131
Query: 178 HFV 180
F+
Sbjct: 132 KFI 134
>gi|196033826|ref|ZP_03101237.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus W]
gi|228945797|ref|ZP_04108143.1| hypothetical protein bthur0007_19530 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|195993506|gb|EDX57463.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus W]
gi|228813862|gb|EEM60137.1| hypothetical protein bthur0007_19530 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 375
Score = 40.8 bits (94), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKKQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|228927253|ref|ZP_04090315.1| hypothetical protein bthur0010_19660 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|229121739|ref|ZP_04250961.1| hypothetical protein bcere0016_20390 [Bacillus cereus 95/8201]
gi|228661714|gb|EEL17332.1| hypothetical protein bcere0016_20390 [Bacillus cereus 95/8201]
gi|228832400|gb|EEM77975.1| hypothetical protein bthur0010_19660 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 375
Score = 40.8 bits (94), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|150025719|ref|YP_001296545.1| NifU-like protein [Flavobacterium psychrophilum JIP02/86]
gi|149772260|emb|CAL43736.1| NifU-like protein [Flavobacterium psychrophilum JIP02/86]
Length = 79
Score = 40.8 bits (94), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 128 RVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+RP + DGGDI D V + ++GAC+ C + T++ GV + + P+++ +
Sbjct: 16 EIRPFLNSDGGDIELVSIEDSKHVKVRLQGACNSCSVSQMTMRAGVETTIKKYAPQIETV 75
>gi|228907934|ref|ZP_04071785.1| hypothetical protein bthur0013_20980 [Bacillus thuringiensis IBL
200]
gi|228851693|gb|EEM96496.1| hypothetical protein bthur0013_20980 [Bacillus thuringiensis IBL
200]
Length = 375
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|260770783|ref|ZP_05879712.1| protein gntY [Vibrio furnissii CIP 102972]
gi|260614020|gb|EEX39210.1| protein gntY [Vibrio furnissii CIP 102972]
gi|315178824|gb|ADT85738.1| predicted gluconate transport-associated protein [Vibrio furnissii
NCTC 11218]
Length = 166
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ + +V P +A GG + + + DG+ + G C+GC TLK
Sbjct: 75 VADDAPLMERVEYAIQTQVNPQLAGHGGHVQLLEISDDGVALVQFGGGCNGCSMVDVTLK 134
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 135 EGIEKELLAQFEGELTAVR 153
>gi|228900795|ref|ZP_04065010.1| hypothetical protein bthur0014_19970 [Bacillus thuringiensis IBL
4222]
gi|228858721|gb|EEN03166.1| hypothetical protein bthur0014_19970 [Bacillus thuringiensis IBL
4222]
Length = 375
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|229029909|ref|ZP_04185978.1| hypothetical protein bcere0028_19920 [Bacillus cereus AH1271]
gi|228731417|gb|EEL82330.1| hypothetical protein bcere0028_19920 [Bacillus cereus AH1271]
Length = 375
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|218233107|ref|YP_002366894.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus B4264]
gi|229150427|ref|ZP_04278643.1| hypothetical protein bcere0011_19780 [Bacillus cereus m1550]
gi|218161064|gb|ACK61056.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus B4264]
gi|228632920|gb|EEK89533.1| hypothetical protein bcere0011_19780 [Bacillus cereus m1550]
Length = 375
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|228955951|ref|ZP_04117887.1| hypothetical protein bthur0006_52700 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229069733|ref|ZP_04203018.1| hypothetical protein bcere0025_19360 [Bacillus cereus F65185]
gi|229079371|ref|ZP_04211913.1| hypothetical protein bcere0023_20260 [Bacillus cereus Rock4-2]
gi|229178571|ref|ZP_04305935.1| hypothetical protein bcere0005_19290 [Bacillus cereus 172560W]
gi|229190288|ref|ZP_04317289.1| hypothetical protein bcere0002_19560 [Bacillus cereus ATCC 10876]
gi|228593072|gb|EEK50890.1| hypothetical protein bcere0002_19560 [Bacillus cereus ATCC 10876]
gi|228604729|gb|EEK62186.1| hypothetical protein bcere0005_19290 [Bacillus cereus 172560W]
gi|228703904|gb|EEL56348.1| hypothetical protein bcere0023_20260 [Bacillus cereus Rock4-2]
gi|228713354|gb|EEL65244.1| hypothetical protein bcere0025_19360 [Bacillus cereus F65185]
gi|228803731|gb|EEM50414.1| hypothetical protein bthur0006_52700 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 375
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|30020290|ref|NP_831921.1| HEAT repeat-containing PBS lyase [Bacillus cereus ATCC 14579]
gi|206972129|ref|ZP_03233077.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
AH1134]
gi|228958476|ref|ZP_04120196.1| hypothetical protein bthur0005_19820 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228965167|ref|ZP_04126261.1| hypothetical protein bthur0004_20040 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|229109644|ref|ZP_04239230.1| hypothetical protein bcere0018_19050 [Bacillus cereus Rock1-15]
gi|229127600|ref|ZP_04256589.1| hypothetical protein bcere0015_20490 [Bacillus cereus BDRD-Cer4]
gi|296502773|ref|YP_003664473.1| HEAT repeat-containing PBS lyase [Bacillus thuringiensis BMB171]
gi|29895840|gb|AAP09122.1| PBS lyase HEAT-like repeat [Bacillus cereus ATCC 14579]
gi|206733052|gb|EDZ50226.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
AH1134]
gi|228655677|gb|EEL11526.1| hypothetical protein bcere0015_20490 [Bacillus cereus BDRD-Cer4]
gi|228673685|gb|EEL28943.1| hypothetical protein bcere0018_19050 [Bacillus cereus Rock1-15]
gi|228794401|gb|EEM41913.1| hypothetical protein bthur0004_20040 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228801103|gb|EEM48000.1| hypothetical protein bthur0005_19820 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|296323825|gb|ADH06753.1| HEAT repeat-containing PBS lyase [Bacillus thuringiensis BMB171]
Length = 375
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|311068699|ref|YP_003973622.1| putative lyase [Bacillus atrophaeus 1942]
gi|310869216|gb|ADP32691.1| putative lyase [Bacillus atrophaeus 1942]
Length = 376
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I + + + ++ + P+ + I I G+ VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILTEELPAGKSNNYKPDQTEGAPPVVAEILKIEGVKGVYHVADFLAVER 66
Query: 66 D-QYDWEHLRPPVLGMI-MEHFISGDPIIHNGGLGDMKL 102
+ +YDW+ + P V ME+ S + G++K+
Sbjct: 67 NARYDWKDILPQVRSAFGMENTESTESRSDQESFGEVKV 105
>gi|288957497|ref|YP_003447838.1| nitrogen fixation protein [Azospirillum sp. B510]
gi|288909805|dbj|BAI71294.1| nitrogen fixation protein [Azospirillum sp. B510]
Length = 307
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 118 VQRIKEVLD--NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
VQR+K ++ +RP + RDGGD+ +++ + GACSGC ++ T+
Sbjct: 227 VQRMKVIMSAIEEMRPQIQRDGGDVELVDIDGKDIYVRLSGACSGCSQSAGTM 279
>gi|163939978|ref|YP_001644862.1| HEAT repeat-containing PBS lyase [Bacillus weihenstephanensis
KBAB4]
gi|163862175|gb|ABY43234.1| PBS lyase HEAT domain protein repeat-containing protein [Bacillus
weihenstephanensis KBAB4]
Length = 375
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPVQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|228920917|ref|ZP_04084255.1| hypothetical protein bthur0011_19280 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228838706|gb|EEM84009.1| hypothetical protein bthur0011_19280 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 375
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|228939316|ref|ZP_04101908.1| hypothetical protein bthur0008_19760 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228972194|ref|ZP_04132809.1| hypothetical protein bthur0003_19700 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228978808|ref|ZP_04139178.1| hypothetical protein bthur0002_20100 [Bacillus thuringiensis
Bt407]
gi|228780910|gb|EEM29118.1| hypothetical protein bthur0002_20100 [Bacillus thuringiensis
Bt407]
gi|228787507|gb|EEM35471.1| hypothetical protein bthur0003_19700 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228820340|gb|EEM66373.1| hypothetical protein bthur0008_19760 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326939892|gb|AEA15788.1| HEAT repeat-containing PBS lyase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 375
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|218897171|ref|YP_002445582.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus G9842]
gi|218543423|gb|ACK95817.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus G9842]
Length = 375
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|229155773|ref|ZP_04283879.1| hypothetical protein bcere0010_19650 [Bacillus cereus ATCC 4342]
gi|228627759|gb|EEK84480.1| hypothetical protein bcere0010_19650 [Bacillus cereus ATCC 4342]
Length = 375
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|229043940|ref|ZP_04191635.1| hypothetical protein bcere0027_19820 [Bacillus cereus AH676]
gi|228725397|gb|EEL76659.1| hypothetical protein bcere0027_19820 [Bacillus cereus AH676]
Length = 375
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|229133019|ref|ZP_04261860.1| hypothetical protein bcere0014_19450 [Bacillus cereus BDRD-ST196]
gi|228650437|gb|EEL06431.1| hypothetical protein bcere0014_19450 [Bacillus cereus BDRD-ST196]
Length = 375
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPVQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|229059873|ref|ZP_04197248.1| hypothetical protein bcere0026_19810 [Bacillus cereus AH603]
gi|228719418|gb|EEL71021.1| hypothetical protein bcere0026_19810 [Bacillus cereus AH603]
Length = 375
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPVQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|229011478|ref|ZP_04168666.1| hypothetical protein bmyco0001_19280 [Bacillus mycoides DSM 2048]
gi|229167043|ref|ZP_04294787.1| hypothetical protein bcere0007_20090 [Bacillus cereus AH621]
gi|228616396|gb|EEK73477.1| hypothetical protein bcere0007_20090 [Bacillus cereus AH621]
gi|228749769|gb|EEL99606.1| hypothetical protein bmyco0001_19280 [Bacillus mycoides DSM 2048]
Length = 375
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPVQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|322378956|ref|ZP_08053370.1| NifU-like protein [Helicobacter suis HS1]
gi|322379810|ref|ZP_08054107.1| iron-sulfur cluster assembly scaffold protein [Helicobacter suis
HS5]
gi|321147778|gb|EFX42381.1| iron-sulfur cluster assembly scaffold protein [Helicobacter suis
HS5]
gi|321148632|gb|EFX43118.1| NifU-like protein [Helicobacter suis HS1]
Length = 326
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 107 SGDFIESDSAVVQRIKEV---LDNRVRPAVARDGGDIVFKGYRDG----IVFLSMRGACS 159
GD + +VQ++K + +D VRP + DGG++ ++G V++ GAC
Sbjct: 237 EGDLAFQEMTMVQKVKAIDKTIDAHVRPMLMMDGGNLEILDIKEGGGFVDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFVPE 182
GC SA+ + + +L + E
Sbjct: 297 GCASAASGTLFAIEGVLQDQLDE 319
>gi|118477604|ref|YP_894755.1| HEAT repeat-containing protein [Bacillus thuringiensis str. Al
Hakam]
gi|196046077|ref|ZP_03113305.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
03BB108]
gi|225864155|ref|YP_002749533.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
03BB102]
gi|229184411|ref|ZP_04311618.1| hypothetical protein bcere0004_19740 [Bacillus cereus BGSC 6E1]
gi|118416829|gb|ABK85248.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
gi|196023132|gb|EDX61811.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
03BB108]
gi|225785671|gb|ACO25888.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
03BB102]
gi|228599207|gb|EEK56820.1| hypothetical protein bcere0004_19740 [Bacillus cereus BGSC 6E1]
Length = 375
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|300118122|ref|ZP_07055870.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus SJ1]
gi|298724433|gb|EFI65127.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus SJ1]
Length = 375
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|228985281|ref|ZP_04145444.1| hypothetical protein bthur0001_19790 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228774436|gb|EEM22839.1| hypothetical protein bthur0001_19790 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 375
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|229196417|ref|ZP_04323164.1| hypothetical protein bcere0001_19760 [Bacillus cereus m1293]
gi|228587054|gb|EEK45125.1| hypothetical protein bcere0001_19760 [Bacillus cereus m1293]
Length = 375
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|206975315|ref|ZP_03236229.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
H3081.97]
gi|217959715|ref|YP_002338267.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus AH187]
gi|229138906|ref|ZP_04267485.1| hypothetical protein bcere0013_20190 [Bacillus cereus BDRD-ST26]
gi|206746736|gb|EDZ58129.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
H3081.97]
gi|217063358|gb|ACJ77608.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus AH187]
gi|228644531|gb|EEL00784.1| hypothetical protein bcere0013_20190 [Bacillus cereus BDRD-ST26]
Length = 375
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|324326222|gb|ADY21482.1| HEAT repeat-containing PBS lyase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 375
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|229074890|ref|ZP_04207899.1| hypothetical protein bcere0024_19250 [Bacillus cereus Rock4-18]
gi|229096707|ref|ZP_04227678.1| hypothetical protein bcere0020_19540 [Bacillus cereus Rock3-29]
gi|229115684|ref|ZP_04245089.1| hypothetical protein bcere0017_19770 [Bacillus cereus Rock1-3]
gi|228667826|gb|EEL23263.1| hypothetical protein bcere0017_19770 [Bacillus cereus Rock1-3]
gi|228686913|gb|EEL40820.1| hypothetical protein bcere0020_19540 [Bacillus cereus Rock3-29]
gi|228708227|gb|EEL60391.1| hypothetical protein bcere0024_19250 [Bacillus cereus Rock4-18]
Length = 375
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPVQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|70731021|ref|YP_260762.1| yhgI protein [Pseudomonas fluorescens Pf-5]
gi|123654765|sp|Q4KAH1|NFUA_PSEF5 RecName: Full=Fe/S biogenesis protein nfuA
gi|68345320|gb|AAY92926.1| yhgI protein [Pseudomonas fluorescens Pf-5]
Length = 194
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETL 168
+ +DS V +RI L + P +A GG + + DGI L G C GC A TL
Sbjct: 103 MVNADSPVNERINYYLQTEINPGLASHGGQVSLIDVVEDGIAVLQFGGGCQGCGQADVTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PE+K +R V
Sbjct: 163 KEGIERTLLERIPELKGVRDV 183
>gi|89897915|ref|YP_515025.1| NifU-related protein [Chlamydophila felis Fe/C-56]
gi|89331287|dbj|BAE80880.1| NifU-related protein [Chlamydophila felis Fe/C-56]
Length = 273
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ ++ + + +V P A DGG + + + IV +S G CSGC SA + + +L
Sbjct: 186 LHALRTIAEEKVSPYTALDGGSVFIESLEENIVTISYAGNCSGCFSAIGSTLNSIGQLLR 245
Query: 178 HFV 180
+V
Sbjct: 246 AYV 248
>gi|30262187|ref|NP_844564.1| HEAT repeat-containing PBS lyase [Bacillus anthracis str. Ames]
gi|49185028|ref|YP_028280.1| HEAT repeat-containing PBS lyase [Bacillus anthracis str. Sterne]
gi|49481614|ref|YP_036317.1| HEAT-like repeat-containing protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|50196932|ref|YP_018814.3| HEAT repeat-containing PBS lyase [Bacillus anthracis str. 'Ames
Ancestor']
gi|52143266|ref|YP_083562.1| HEAT-like repeat-containing protein [Bacillus cereus E33L]
gi|167632880|ref|ZP_02391206.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0442]
gi|170686452|ref|ZP_02877673.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0465]
gi|170708438|ref|ZP_02898881.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0389]
gi|177650796|ref|ZP_02933693.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0174]
gi|190567836|ref|ZP_03020747.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
Tsiankovskii-I]
gi|227815013|ref|YP_002815022.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. CDC 684]
gi|228914783|ref|ZP_04078392.1| hypothetical protein bthur0012_20130 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228933499|ref|ZP_04096352.1| hypothetical protein bthur0009_19650 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|229091168|ref|ZP_04222391.1| hypothetical protein bcere0021_19860 [Bacillus cereus Rock3-42]
gi|229604723|ref|YP_002866540.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0248]
gi|254684756|ref|ZP_05148616.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. CNEVA-9066]
gi|254721048|ref|ZP_05182839.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A1055]
gi|254737202|ref|ZP_05194906.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. Western North America USA6153]
gi|254743613|ref|ZP_05201298.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. Kruger B]
gi|254751517|ref|ZP_05203554.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. Vollum]
gi|254759032|ref|ZP_05211059.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. Australia 94]
gi|301053702|ref|YP_003791913.1| hypothetical protein BACI_c21220 [Bacillus anthracis CI]
gi|30256813|gb|AAP26050.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. Ames]
gi|49178955|gb|AAT54331.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. Sterne]
gi|49333170|gb|AAT63816.1| conserved hypothetical protein, HEAT-like repeat domain [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|50082994|gb|AAT31289.3| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. 'Ames Ancestor']
gi|51976735|gb|AAU18285.1| conserved hypothetical protein; HEAT-like repeat domain [Bacillus
cereus E33L]
gi|167531692|gb|EDR94357.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0442]
gi|170126677|gb|EDS95561.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0389]
gi|170669528|gb|EDT20270.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0465]
gi|172083257|gb|EDT68318.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0174]
gi|190560891|gb|EDV14865.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
Tsiankovskii-I]
gi|227007149|gb|ACP16892.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. CDC 684]
gi|228692299|gb|EEL46035.1| hypothetical protein bcere0021_19860 [Bacillus cereus Rock3-42]
gi|228826228|gb|EEM72008.1| hypothetical protein bthur0009_19650 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228845102|gb|EEM90144.1| hypothetical protein bthur0012_20130 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|229269131|gb|ACQ50768.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0248]
gi|300375871|gb|ADK04775.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
str. CI]
Length = 375
Score = 40.4 bits (93), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|119896844|ref|YP_932057.1| nitrogen fixation protein NifU [Azoarcus sp. BH72]
gi|119669257|emb|CAL93170.1| probable nitrogen fixation protein NifU [Azoarcus sp. BH72]
Length = 296
Score = 40.4 bits (93), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+++I++V++ + RP + RD GDI +++SM+GAC+GC + TL
Sbjct: 214 IRKIEQVIE-KARPNLQRDHGDIELVDVDGKNIYVSMKGACAGCQMEAATL 263
>gi|37678411|ref|NP_933020.1| putative DNA uptake protein [Vibrio vulnificus YJ016]
gi|37197150|dbj|BAC92991.1| thioredoxin-like protein [Vibrio vulnificus YJ016]
Length = 227
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ + +V P +A GG + D G+ ++ G C+GC TLK
Sbjct: 136 VADDAPLLERVEYAIQTQVNPQLAGHGGHVKLMEITDAGVAIVAFGGGCNGCSMVDVTLK 195
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 196 EGIEKELLQQFSGELTAVR 214
>gi|330808713|ref|YP_004353175.1| Fe/S biogenesis protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376821|gb|AEA68171.1| Fe/S biogenesis protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 194
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETL 168
+ +DS V +RI L + P +A GG + + DGI L G C GC A TL
Sbjct: 103 MVNADSPVNERINYYLQTEINPGLASHGGQVSLIDVVEDGIAVLQFGGGCQGCGQADVTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PE+K +R V
Sbjct: 163 KEGIERTLLERIPELKGVRDV 183
>gi|86146559|ref|ZP_01064881.1| hypothetical protein MED222_18183 [Vibrio sp. MED222]
gi|85835616|gb|EAQ53752.1| hypothetical protein MED222_18183 [Vibrio sp. MED222]
Length = 194
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ + +V P +A GG + + + +G ++ G C+GC TLK
Sbjct: 103 VSDDATLIERVEYAIQTQVNPQLAGHGGHVSLVEITEEGAAIVAFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 163 EGIEKELLQQFEGELTAVR 181
>gi|225619753|ref|YP_002721010.1| NifU-like N terminal domain-containing protein [Brachyspira
hyodysenteriae WA1]
gi|225214572|gb|ACN83306.1| NifU N, NifU-like N terminal domain protein [Brachyspira
hyodysenteriae WA1]
Length = 277
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++I+E L+ + P + DGG V + +GACS C S+ TLK V L
Sbjct: 206 IKKIEEALERVINPMLKMDGGSCRLVDVDGNKVMIEFKGACSACASSKNTLKGFVEPKLQ 265
Query: 178 HFVPEVKDIRTV 189
V KD+ V
Sbjct: 266 ELVS--KDLEVV 275
>gi|229144799|ref|ZP_04273196.1| hypothetical protein bcere0012_19590 [Bacillus cereus BDRD-ST24]
gi|228638521|gb|EEK94954.1| hypothetical protein bcere0012_19590 [Bacillus cereus BDRD-ST24]
Length = 375
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPIQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|148976499|ref|ZP_01813195.1| predicted gluconate transport associated protein [Vibrionales
bacterium SWAT-3]
gi|145964075|gb|EDK29332.1| predicted gluconate transport associated protein [Vibrionales
bacterium SWAT-3]
Length = 194
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ + +V P +A GG + + + DG ++ G C+GC TLK
Sbjct: 103 VADDAPLLERVEYAIQTQVNPQLAGHGGHVSLVEITEDGAAIVAFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 163 EGIEKELLQQFEGELTAVR 181
>gi|296125736|ref|YP_003632988.1| Fe-S cluster assembly protein NifU [Brachyspira murdochii DSM
12563]
gi|296017552|gb|ADG70789.1| Fe-S cluster assembly protein NifU [Brachyspira murdochii DSM
12563]
Length = 277
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V++I+E L+ + P + DGG V + +GACS C S+ TLK V L
Sbjct: 206 VKKIEEALERVINPMLKMDGGSCRLVDVDGNKVMIEFKGACSSCASSKNTLKGFVEPKLQ 265
Query: 178 HFVPEVKDIRTV 189
V KD+ V
Sbjct: 266 EIVS--KDLEVV 275
>gi|221482460|gb|EEE20808.1| hypothetical protein TGGT1_065730 [Toxoplasma gondii GT1]
Length = 483
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 121 IKEVLDNRVRPAVARDGGDI--VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+++VL++ VRP + GG++ V IV L+ +GACS CPSA +TL G+ L
Sbjct: 263 VEQVLES-VRPYLRGHGGNVKLVELDSEKKIVRLAFKGACSTCPSAHQTLYEGLQGALRE 321
Query: 179 FVPEV 183
P++
Sbjct: 322 VWPDL 326
>gi|84386342|ref|ZP_00989370.1| hypothetical protein V12B01_02495 [Vibrio splendidus 12B01]
gi|84378766|gb|EAP95621.1| hypothetical protein V12B01_02495 [Vibrio splendidus 12B01]
Length = 194
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ + +V P +A GG + + + +G ++ G C+GC TLK
Sbjct: 103 VSDDATLIERVEYAIQTQVNPQLAGHGGHVSLVEITEEGAAIVAFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ +R
Sbjct: 163 EGIEKELLQQFEGELTAVR 181
>gi|223040071|ref|ZP_03610352.1| NifU family protein [Campylobacter rectus RM3267]
gi|222878657|gb|EEF13757.1| NifU family protein [Campylobacter rectus RM3267]
Length = 330
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGI----VFLSMRGACSGCPSASETLKYGV 172
++ I+ V+D ++RP + DGG++ + +D V++ GACSGC S + Y +
Sbjct: 254 LKAIESVIDEQIRPMLMMDGGNMEILDLQKDAEGKFDVYIRYMGACSGCASGATGTLYAI 313
Query: 173 ANILNH 178
N+L
Sbjct: 314 ENVLQE 319
>gi|118580432|ref|YP_901682.1| Fe-S cluster assembly protein NifU [Pelobacter propionicus DSM
2379]
gi|118503142|gb|ABK99624.1| Fe-S cluster assembly protein NifU [Pelobacter propionicus DSM
2379]
Length = 290
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
S+ +Q I+EVL+ +RP + DGGD+ V ++ R AC+GC S+ T + V
Sbjct: 213 SNMKRMQMIQEVLERDIRPLLWADGGDLELIDIDGPKVQVAFRKACAGCASSGNTARM-V 271
Query: 173 ANILNHFVPE 182
+ L V E
Sbjct: 272 EHKLRDLVAE 281
>gi|157804286|gb|ABV79889.1| NifU [Anabaena siamensis TISTR 8012]
Length = 195
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
I++VLD VR + DGGD+ V + ++GAC C S++ TLK +
Sbjct: 127 IQKVLDEEVRLVLIADGGDVELYDIEGDKVKVKLQGACGSCSSSTATLKIAI 178
>gi|315057669|gb|ADT71998.1| Iron-sulfur cluster assembly scaffold protein NifU [Campylobacter
jejuni subsp. jejuni S3]
Length = 323
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGI-VFLSMRGACSGCPSASETLKYGV 172
++ ++ VLD +RP + DGGD+ + K I V++ GACSGC S S Y +
Sbjct: 247 LKAVESVLDAEIRPMLHNDGGDLEVIDIQKTEGAAIDVYIRYLGACSGCSSGSGATLYAI 306
Query: 173 ANILNH 178
IL
Sbjct: 307 ETILQE 312
>gi|158425034|ref|YP_001526326.1| putative NifU protein [Azorhizobium caulinodans ORS 571]
gi|158331923|dbj|BAF89408.1| putative NifU protein [Azorhizobium caulinodans ORS 571]
Length = 94
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
+RI + + +RP + RDGGD G V + M GAC C AS TL+
Sbjct: 19 ERIIKAVIEEIRPNLQRDGGDCQLLGLEGNKVLVKMTGACVFCKLASMTLE 69
>gi|117620229|ref|YP_854827.1| putative DNA uptake protein [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|150383443|sp|A0KF09|NFUA_AERHH RecName: Full=Fe/S biogenesis protein nfuA
gi|117561636|gb|ABK38584.1| protein GntY [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 192
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ ++ RI+ VL + V P +A GG + + D + L G C+GC TLK
Sbjct: 101 VADDAPLIDRIEYVLMSEVNPMLAGHGGKVTLVELTEDKLAILQFGGGCNGCSMVDYTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ ++
Sbjct: 161 EGIEKQLLEKFPGELNGVK 179
>gi|218708212|ref|YP_002415833.1| putative DNA uptake protein [Vibrio splendidus LGP32]
gi|218321231|emb|CAV17181.1| hypothetical protein VS_0148 [Vibrio splendidus LGP32]
Length = 245
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 80/195 (41%), Gaps = 27/195 (13%)
Query: 12 ATLKFIPGQVVLVEGA-IHFSNAKEAEISPLASRIFSI-PGIASV-----YFGYDFITVG 64
+T F+ + + E A HF+N + R+F + PG + Y D I
Sbjct: 46 STQVFVVSNITITETAQTHFANLLSQQPEGTNIRVFVVNPGTQNAECGVSYCPTDAIEAS 105
Query: 65 KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES----------D 114
+ +E V + + P + + D D MGS +++ D
Sbjct: 106 DTKLSFEAFSAYVDELSL-------PFLDEAEI-DFVTDKMGSQLTLKAPNAKMRKVSDD 157
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGV- 172
+ +++R++ + +V P +A GG + + + +G ++ G C+GC TLK G+
Sbjct: 158 ATLIERVEYAIQTQVNPQLAGHGGHVSLVEITEEGAAIVAFGGGCNGCSMVDVTLKEGIE 217
Query: 173 ANILNHFVPEVKDIR 187
+L F E+ +R
Sbjct: 218 KELLQQFEGELTAVR 232
>gi|167855552|ref|ZP_02478314.1| predicted gluconate transport-associated protein [Haemophilus
parasuis 29755]
gi|167853353|gb|EDS24605.1| predicted gluconate transport-associated protein [Haemophilus
parasuis 29755]
Length = 193
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ ++R+ V+ ++ P +A GG + + D L G C+GC TLK
Sbjct: 102 VADDAPFIERLDYVIQTQINPQLASHGGRVTLIEVTEDKYAVLQFGGGCNGCSMVDVTLK 161
Query: 170 YGVANILNHFVPE----VKDI 186
G+ L PE VKD+
Sbjct: 162 EGIEKQLLALFPEELVGVKDV 182
>gi|308047919|ref|YP_003911485.1| IscR-regulated protein YhgI [Ferrimonas balearica DSM 9799]
gi|307630109|gb|ADN74411.1| IscR-regulated protein YhgI [Ferrimonas balearica DSM 9799]
Length = 192
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ + R++ V+ ++V P +A GG I D GI + G C+GC TLK
Sbjct: 101 VADDAPLRDRVEYVIQSQVNPQLAGHGGFITLMELTDDGIAVIQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L F E+ ++ V
Sbjct: 161 DGIEKQLLEEFSGELTAVKDV 181
>gi|228991182|ref|ZP_04151141.1| hypothetical protein bpmyx0001_19410 [Bacillus pseudomycoides DSM
12442]
gi|228768595|gb|EEM17199.1| hypothetical protein bpmyx0001_19410 [Bacillus pseudomycoides DSM
12442]
Length = 375
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENAEQAPEQVQHILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|52426287|ref|YP_089424.1| putative DNA uptake protein [Mannheimia succiniciproducens MBEL55E]
gi|81386480|sp|Q65QC1|NFUA_MANSM RecName: Full=Fe/S biogenesis protein nfuA
gi|52308339|gb|AAU38839.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 194
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R+ V+ ++ P +A GG I D G L G C+GC TLK
Sbjct: 103 VADDAPLIERVDYVIQTQINPQLASHGGRITLVEITDEGYAILQFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
GV ++ F E+K + +
Sbjct: 163 DGVEKQLVELFAGELKGAKDI 183
>gi|77361763|ref|YP_341338.1| putative DNA uptake protein [Pseudoalteromonas haloplanktis TAC125]
gi|119370612|sp|Q3IJQ5|NFUA_PSEHT RecName: Full=Fe/S biogenesis protein nfuA
gi|76876674|emb|CAI87896.1| conserved protein of unknown function [Pseudoalteromonas
haloplanktis TAC125]
Length = 191
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
I D+++ +R++ +L+ V P +A GG + + + GI L G C+GC TLK
Sbjct: 101 ISGDASLNERVQHMLETEVNPQLANHGGQVSLVEITAAGIAVLQFGGGCNGCSMIDVTLK 160
Query: 170 YGV 172
G+
Sbjct: 161 EGI 163
>gi|289812184|ref|ZP_06542813.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 173
Score = 40.0 bits (92), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ L +++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VADDAPLMERVEYALQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPE 182
G+ +LN F PE
Sbjct: 161 EGIEKQLLNEF-PE 173
>gi|295704071|ref|YP_003597146.1| PBS lyase HEAT-like repeat family protein [Bacillus megaterium
DSM 319]
gi|294801730|gb|ADF38796.1| PBS lyase HEAT-like repeat family protein [Bacillus megaterium
DSM 319]
Length = 374
Score = 40.0 bits (92), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISP-LASRIFSIPGIASVYFGYDFITVG 64
E TP+P T+K I VL G + K AE +P + I + G+ VY DF+ V
Sbjct: 7 EPTPSPNTMK-INLDEVLSGGKSNNYTEKNAEAAPEVVQDILKVEGVKGVYHVADFLAVE 65
Query: 65 KD-QYDWEHLRPPV 77
++ +YDW+ + P V
Sbjct: 66 RNAKYDWKQILPQV 79
>gi|228997277|ref|ZP_04156900.1| hypothetical protein bmyco0003_18590 [Bacillus mycoides Rock3-17]
gi|229004901|ref|ZP_04162629.1| hypothetical protein bmyco0002_18460 [Bacillus mycoides Rock1-4]
gi|228756345|gb|EEM05662.1| hypothetical protein bmyco0002_18460 [Bacillus mycoides Rock1-4]
gi|228762472|gb|EEM11396.1| hypothetical protein bmyco0003_18590 [Bacillus mycoides Rock3-17]
Length = 375
Score = 40.0 bits (92), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENAEQAPEQVQHILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|62185476|ref|YP_220261.1| putative NifU-related protein [Chlamydophila abortus S26/3]
gi|62148543|emb|CAH64314.1| putative NifU-related protein [Chlamydophila abortus S26/3]
Length = 273
Score = 40.0 bits (92), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ ++ + ++++ P VA DGG ++ + IV ++ G CSGC SA + + +L
Sbjct: 186 LHALRTITEDKISPYVALDGGSVLIEKLEGNIVTIAYAGNCSGCFSAIGSTLNSIGQLLR 245
Query: 178 HFV 180
+V
Sbjct: 246 AYV 248
>gi|145300948|ref|YP_001143789.1| DNA uptake protein [Aeromonas salmonicida subsp. salmonicida A449]
gi|150383444|sp|A4ST19|NFUA_AERS4 RecName: Full=Fe/S biogenesis protein nfuA
gi|142853720|gb|ABO92041.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 192
Score = 40.0 bits (92), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ ++ RI+ VL + V P +A GG + + D + L G C+GC TLK
Sbjct: 101 VADDAPLIDRIEYVLMSEVNPMLAGHGGKVTLVELTEDKLAILQFGGGCNGCSMVDYTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ ++
Sbjct: 161 EGIEKQLLEKFPGELNGVK 179
>gi|146299086|ref|YP_001193677.1| NifU domain-containing protein [Flavobacterium johnsoniae UW101]
gi|146153504|gb|ABQ04358.1| nitrogen-fixing NifU domain protein [Flavobacterium johnsoniae
UW101]
Length = 79
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 127 NRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
+ +RP + DGGDI D V + + GAC C TLK GV + + P+++
Sbjct: 15 DEIRPFLKSDGGDITLISIDDDKHVKVRLEGACISCSVNQMTLKAGVETTIKKYAPQIET 74
Query: 186 I 186
+
Sbjct: 75 V 75
>gi|223934715|ref|ZP_03626635.1| nitrogen-fixing NifU domain protein [bacterium Ellin514]
gi|223896670|gb|EEF63111.1| nitrogen-fixing NifU domain protein [bacterium Ellin514]
Length = 305
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
R+ E LD +VRP + GG++ + L ++G C CPS++ TL+ V + +
Sbjct: 117 RLLEALD-KVRPYMESHGGNVELISLVNDKACLRLQGTCKSCPSSAITLELAVRHAIEEA 175
Query: 180 VPEV 183
P++
Sbjct: 176 CPDL 179
>gi|332668404|ref|YP_004451192.1| nitrogen-fixing NifU domain-containing protein [Haliscomenobacter
hydrossis DSM 1100]
gi|332337218|gb|AEE54319.1| nitrogen-fixing NifU domain-containing protein [Haliscomenobacter
hydrossis DSM 1100]
Length = 84
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+E+ S ++ RI L N VRP +A DGG++ V + +V + G C C + T++
Sbjct: 1 METKSELISRIDLAL-NEVRPHLAVDGGNVEVVDVTDEKVVKIKWLGNCQNCNMSIMTMR 59
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ + VPE+ + V
Sbjct: 60 AGIEQAIRVKVPEITGVEAV 79
>gi|77459326|ref|YP_348833.1| HesB/YadR/YfhF [Pseudomonas fluorescens Pf0-1]
gi|123604407|sp|Q3KBL2|NFUA_PSEPF RecName: Full=Fe/S biogenesis protein nfuA
gi|77383329|gb|ABA74842.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 194
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETL 168
+ +DS + +RI L + P +A GG + + DGI L G C GC A TL
Sbjct: 103 MVNADSPINERINYYLQTEINPGLASHGGQVSLIDVVEDGIAVLQFGGGCQGCGQADVTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PE+K +R V
Sbjct: 163 KEGIERTLLERIPELKGVRDV 183
>gi|218903310|ref|YP_002451144.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus AH820]
gi|218535371|gb|ACK87769.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus AH820]
Length = 375
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPL-ASRIFSIPGIASVYFGYDFITVG 64
E TP+P T+K I + VL GA + + E +P+ I I GI VY DF+ V
Sbjct: 7 EPTPSPNTMKVILNE-VLPSGARNNYTKENTEQAPVQVQEILKIEGIKGVYHVADFLAVE 65
Query: 65 KD-QYDWEHL 73
++ +YDW+ L
Sbjct: 66 RNAKYDWKVL 75
>gi|307720595|ref|YP_003891735.1| nitrogen-fixing NifU domain-containing protein [Sulfurimonas
autotrophica DSM 16294]
gi|306978688|gb|ADN08723.1| nitrogen-fixing NifU domain protein [Sulfurimonas autotrophica DSM
16294]
Length = 122
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
D + + +K L +V V GGDI G ++G V++ + GAC GC + T K V
Sbjct: 5 DEDIYEAVKNYLP-KVSEYVNSHGGDIKLLGAKEGTVYIELTGACGGCSMSLMTTKIVVQ 63
Query: 174 NILNHFV-PEV 183
L + PE+
Sbjct: 64 KKLRELIHPEL 74
>gi|207109796|ref|ZP_03243958.1| nifU-like protein [Helicobacter pylori HPKX_438_CA4C1]
Length = 97
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIV---FKGYRDGI-VFLSMRGACS 159
+G+ + +VQ+IK +V+D +RP + DGGD+ K D I V++ GAC
Sbjct: 22 NGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 81
Query: 160 GCPSASETLKYGVAN 174
GC SA+ + + N
Sbjct: 82 GCMSATTGTLFAIEN 96
>gi|256372264|ref|YP_003110088.1| nitrogen-fixing NifU domain protein [Acidimicrobium ferrooxidans
DSM 10331]
gi|256008848|gb|ACU54415.1| nitrogen-fixing NifU domain protein [Acidimicrobium ferrooxidans
DSM 10331]
Length = 109
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 125 LDNRVRPAVARDGGDI--VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
L ++RPAV DGGD+ V G+V + + GACS C ++ T++ GV I+
Sbjct: 16 LIEQLRPAVQYDGGDLELVDVNTETGVVRVRLTGACSSCAISTSTIQLGVERIVK 70
>gi|261493940|ref|ZP_05990448.1| HesB family protein [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261494775|ref|ZP_05991254.1| HesB family protein [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261309592|gb|EEY10816.1| HesB family protein [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261310372|gb|EEY11567.1| HesB family protein [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 198
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ ++R+ V+ +V P +A GG + + D L G C+GC TLK
Sbjct: 107 VADDAPFIERLDYVIQTQVNPQLASHGGKVTLIEITEDKYAVLQFGGGCNGCSMVDVTLK 166
Query: 170 YGVANILNHFVPE----VKDI 186
G+ L P+ VKDI
Sbjct: 167 EGIEKQLLAMFPDELVGVKDI 187
>gi|254363181|ref|ZP_04979230.1| HesB family protein [Mannheimia haemolytica PHL213]
gi|153095075|gb|EDN75626.1| HesB family protein [Mannheimia haemolytica PHL213]
Length = 198
Score = 39.7 bits (91), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ ++R+ V+ +V P +A GG + + D L G C+GC TLK
Sbjct: 107 VADDAPFIERLDYVIQTQVNPQLASHGGKVTLIEITEDKYAVLQFGGGCNGCSMVDVTLK 166
Query: 170 YGVANILNHFVPE----VKDI 186
G+ L P+ VKDI
Sbjct: 167 EGIEKQLLAMFPDELVGVKDI 187
>gi|159466680|ref|XP_001691526.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
gi|158278872|gb|EDP04634.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
Length = 489
Score = 39.7 bits (91), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 151 FLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDI 186
+L ++GACS CPS S T+K G+ I N F +V+DI
Sbjct: 374 YLRLQGACSSCPSQSATMKGGIERAIRNAFGDQVRDI 410
>gi|65319472|ref|ZP_00392431.1| COG1413: FOG: HEAT repeat [Bacillus anthracis str. A2012]
Length = 375
Score = 39.7 bits (91), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 8 TPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKD- 66
TP+P T+K I +V+ +++N + + I I GI VY DF+ V ++
Sbjct: 9 TPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVERNA 68
Query: 67 QYDWEHL 73
+YDW+ L
Sbjct: 69 KYDWKVL 75
>gi|157692691|ref|YP_001487153.1| hypothetical protein BPUM_1923 [Bacillus pumilus SAFR-032]
gi|157681449|gb|ABV62593.1| hypothetical protein BPUM_1923 [Bacillus pumilus SAFR-032]
Length = 378
Score = 39.7 bits (91), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I + + + ++ ++ E + RI +I G+ VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILTEALAGGKSNNYKKDQKEEAPEMIKRILNIEGVKGVYHVADFLAVER 66
Query: 66 D-QYDWEHLRPPVLGMIMEHF 85
+ ++DW+ +L + E F
Sbjct: 67 NAKFDWQG----ILQQVREAF 83
>gi|124023793|ref|YP_001018100.1| hypothetical protein P9303_21001 [Prochlorococcus marinus str. MIT
9303]
gi|123964079|gb|ABM78835.1| Hypothetical protein P9303_21001 [Prochlorococcus marinus str. MIT
9303]
Length = 42
Score = 39.7 bits (91), Expect = 0.19, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 149 IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+V + ++GAC CPS++ TLK G+ L +PEV ++
Sbjct: 1 MVKVCLQGACCSCPSSTMTLKMGIERKLREIIPEVSEV 38
>gi|297620543|ref|YP_003708680.1| putative nitrogen fixation related protein nifU [Waddlia
chondrophila WSU 86-1044]
gi|297375844|gb|ADI37674.1| putative nitrogen fixation related protein nifU [Waddlia
chondrophila WSU 86-1044]
Length = 258
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSA-SETLKYGVANILNHF 179
I++VL++ +RP +A DGG + K ++ + ++ +G C+ C SA TL Y +
Sbjct: 187 IEQVLNDEIRPYIALDGGGVEVKELKENELVIAYQGNCTSCFSAVGATLSYIQQTVQARV 246
Query: 180 VPEVK 184
P+++
Sbjct: 247 HPDLR 251
>gi|152977980|ref|YP_001343609.1| putative DNA uptake protein [Actinobacillus succinogenes 130Z]
gi|171472933|sp|A6VL27|NFUA_ACTSZ RecName: Full=Fe/S biogenesis protein nfuA
gi|150839703|gb|ABR73674.1| HesB/YadR/YfhF-family protein [Actinobacillus succinogenes 130Z]
Length = 194
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ +++R+ V+ ++ P +A GG I + DG L G C+GC TLK
Sbjct: 103 VADDAPLIERVDYVIQTQINPQLASHGGRITLIEITDDGYAVLQFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
GV ++ F E+K + +
Sbjct: 163 DGVEKQLVEMFNGELKGAKDI 183
>gi|332533247|ref|ZP_08409114.1| hypothetical protein PH505_an00610 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037326|gb|EGI73781.1| hypothetical protein PH505_an00610 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 191
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
D+++ +R++ +L+ V P +A GG + + + GI L G C+GC TLK G+
Sbjct: 104 DASLNERVQHMLETEVNPQLANHGGQVSLVEITAAGIAILQFGGGCNGCSMIDVTLKEGI 163
>gi|111226134|ref|YP_716928.1| hypothetical protein FRAAL6802 [Frankia alni ACN14a]
gi|111153666|emb|CAJ65425.1| Hypothetical protein in nifB-nifU intergenic region (ORF2) [Frankia
alni ACN14a]
Length = 192
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGD-----IVFKGYRDGI--VFLSMRGACSGCPSAS 165
+D+ + ++++E+++ +RP + DGGD ++ G + G V L + GAC GC SA+
Sbjct: 109 ADAKLREQVEEIMEE-IRPMLRGDGGDAEVVAVLAGGGQPGSAEVHLRLTGACGGCSSAN 167
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TL + L +PE+ + V
Sbjct: 168 ATLTGVIEARLRQELPEIGRVALV 191
>gi|315639387|ref|ZP_07894549.1| NifU family protein [Campylobacter upsaliensis JV21]
gi|315480713|gb|EFU71355.1| NifU family protein [Campylobacter upsaliensis JV21]
Length = 323
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGI-VFLSMRGACSGCPSASETLKYGV 172
++ ++ VLD +RP + DGGD+ + K I +++ GACSGC S S Y +
Sbjct: 247 LKAVEAVLDAEIRPMLQGDGGDMEVIDIQKAEGGAIDIYIRYLGACSGCSSGSGATLYAI 306
Query: 173 ANILNH 178
+IL
Sbjct: 307 ESILQE 312
>gi|224372844|ref|YP_002607216.1| NifU family protein [Nautilia profundicola AmH]
gi|223588388|gb|ACM92124.1| NifU family protein [Nautilia profundicola AmH]
Length = 321
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGI--VFLSMRGACSGCPSASETLKYGVA 173
++ I+E LD +++P +A DGG + R DGI V++ GAC+ C S TL
Sbjct: 246 IKAIEEFLDTKIKPMLAMDGGSLELLDIREEDGITKVYIRYMGACATCASGGVTLLAIED 305
Query: 174 NILNHF 179
+ HF
Sbjct: 306 EMKKHF 311
>gi|167391701|ref|XP_001739894.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165896233|gb|EDR23708.1| hypothetical protein EDI_167670 [Entamoeba dispar SAW760]
Length = 110
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETLKYGV 172
+ ++ +V + + P V +DGG++ +DG IV++ G C GC +A+ K +
Sbjct: 5 ISKLNQVFEQYIDPIVKKDGGNVEVYEVKDGVNGEIIVYIQYSGKCVGCAAANGATKEKI 64
Query: 173 ANIL 176
IL
Sbjct: 65 QTIL 68
>gi|255323222|ref|ZP_05364357.1| NifU family protein [Campylobacter showae RM3277]
gi|255299745|gb|EET79027.1| NifU family protein [Campylobacter showae RM3277]
Length = 330
Score = 39.3 bits (90), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGI----VFLSMRGACSGCPSASETLKYGV 172
++ I+ V+D VRP + DGG++ + +D V++ GACSGC S + Y +
Sbjct: 254 LKAIESVIDRDVRPMLMMDGGNMEILDLQKDAEGKFDVYIRYMGACSGCASGATGTLYAI 313
Query: 173 ANILNH 178
N+L
Sbjct: 314 ENVLQE 319
>gi|315128008|ref|YP_004070011.1| DNA uptake protein [Pseudoalteromonas sp. SM9913]
gi|315016522|gb|ADT69860.1| putative DNA uptake protein [Pseudoalteromonas sp. SM9913]
Length = 191
Score = 39.3 bits (90), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
D+++ +R++ +L+ V P +A GG + + + GI L G C+GC TLK G+
Sbjct: 104 DASLNERVQHMLETEVNPQLANHGGQVSLVEITAAGIAVLQFGGGCNGCSMIDVTLKEGI 163
>gi|196039744|ref|ZP_03107048.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
NVH0597-99]
gi|196029447|gb|EDX68050.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
NVH0597-99]
Length = 375
Score = 39.3 bits (90), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPL-ASRIFSIPGIASVYFGYDFITVG 64
E TP+P T+K I + VL GA + + E +P+ I I GI VY DF+ V
Sbjct: 7 EPTPSPNTMKVILNE-VLPSGARNNYTNENIEQAPMQVQEILKIEGIKGVYHVADFLAVE 65
Query: 65 KD-QYDWEHL 73
++ +YDW+ L
Sbjct: 66 RNAKYDWKVL 75
>gi|85710810|ref|ZP_01041871.1| hypothetical protein OS145_02245 [Idiomarina baltica OS145]
gi|85695214|gb|EAQ33151.1| hypothetical protein OS145_02245 [Idiomarina baltica OS145]
Length = 192
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ ++ R++ V+ + P +A GG + V + DG L G C+GC T+K
Sbjct: 101 VADDAPLIDRVEYVIQAEINPQLANHGGHVLVTEITEDGKAVLQFGGGCNGCSMIDVTVK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ ++ F E+ +R V
Sbjct: 161 NGIEKELIERFPDEITGVRDV 181
>gi|90408321|ref|ZP_01216485.1| hypothetical protein PCNPT3_13183 [Psychromonas sp. CNPT3]
gi|90310552|gb|EAS38673.1| hypothetical protein PCNPT3_13183 [Psychromonas sp. CNPT3]
Length = 193
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
++ D+ + +R++ V+ ++ P +A GG I + + D + + G C+GC TLK
Sbjct: 101 VKDDAPLQERVEYVIQVQINPQLASHGGFIKLIELTEDKVAVIEFGGGCNGCSQVDLTLK 160
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L F E+ +R +
Sbjct: 161 DGIEKELLEEFSGELNAVRDI 181
>gi|142396|gb|AAA22167.1| nifU protein [Azotobacter vinelandii]
Length = 312
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
++RI+ VL +RP + RD GD+ V++ + GAC+GC AS TL
Sbjct: 233 IRRIETVL-AAIRPTLQRDKGDVELIDVDGKNVYVKLTGACTGCQMASMTL 282
>gi|307249357|ref|ZP_07531351.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307260607|ref|ZP_07542299.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306858651|gb|EFM90713.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306869684|gb|EFN01469.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 215
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ ++R+ V+ +V P +A GG + + D L G C+GC TLK
Sbjct: 124 VADDAPFIERLDYVIQTQVNPQLASHGGRVTLIEVTEDKYAILQFGGGCNGCSMVDVTLK 183
Query: 170 YGVANILNHFVPE----VKDI 186
G+ L P+ VKD+
Sbjct: 184 EGIEKQLLAMFPDELAGVKDV 204
>gi|226942327|ref|YP_002797400.1| nitrogen fixation Fe-S cluster scaffold protein [Azotobacter
vinelandii DJ]
gi|128318|sp|P05340|NIFU_AZOVI RecName: Full=Nitrogen fixation protein nifU
gi|142360|gb|AAA64725.1| nifU protein [Azotobacter vinelandii]
gi|226717254|gb|ACO76425.1| Nitrogen fixation Fe-S cluster scaffold protein [Azotobacter
vinelandii DJ]
Length = 312
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
++RI+ VL +RP + RD GD+ V++ + GAC+GC AS TL
Sbjct: 233 IRRIETVL-AAIRPTLQRDKGDVELIDVDGKNVYVKLTGACTGCQMASMTL 282
>gi|268317455|ref|YP_003291174.1| Scaffold protein Nfu/NifU [Rhodothermus marinus DSM 4252]
gi|262334989|gb|ACY48786.1| Scaffold protein Nfu/NifU [Rhodothermus marinus DSM 4252]
Length = 102
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 3 IQTEDTPNPATLKFI-PGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
+Q+ TPNP +LKF PGQ + +G + F +A+ A PLA+ +F+I G+ V +F+
Sbjct: 12 LQSHPTPNPNSLKFTAPGQTFIDKGLLSFRSAEAAAAHPLAAALFAIEGVCDVLILPEFV 71
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHF 85
TV K WE + PV+ + +
Sbjct: 72 TVTKRPDVPWEAIEAPVMEALRAYL 96
>gi|169633930|ref|YP_001707666.1| putative membrane-bound protein in GNT I transport system (GntY)
[Acinetobacter baumannii SDF]
gi|254767285|sp|B0VSR5|NFUA_ACIBS RecName: Full=Fe/S biogenesis protein nfuA
gi|169152722|emb|CAP01733.1| putative membrane-bound protein in GNT I transport system (GntY)
[Acinetobacter baumannii]
Length = 212
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI VL + P +A GG+ +D L G C GC + TL
Sbjct: 120 DASIEERITYVLQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLKFGGGCQGCSAIDVTL 179
Query: 169 KYGVANILNHFVPEVKDI 186
K GV L + E++ +
Sbjct: 180 KQGVETTLKEHILELQRV 197
>gi|320162486|ref|YP_004175711.1| hypothetical protein ANT_30850 [Anaerolinea thermophila UNI-1]
gi|319996340|dbj|BAJ65111.1| hypothetical protein ANT_30850 [Anaerolinea thermophila UNI-1]
Length = 89
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
F S ++ + E LD ++ GG + G+ ++ + + GAC GCP + T+
Sbjct: 8 SFEYSTEERLRALIETLDTYIQ---QYHGGSVEMVGFDGKVLKVRLGGACEGCPLSPTTI 64
Query: 169 KYGVANILNHFVPEVKDIRTV 189
VA + F PE++ + V
Sbjct: 65 NGWVAGTVRQFFPEIEKVEAV 85
>gi|237841427|ref|XP_002370011.1| hypothetical protein TGME49_021920 [Toxoplasma gondii ME49]
gi|211967675|gb|EEB02871.1| hypothetical protein TGME49_021920 [Toxoplasma gondii ME49]
Length = 517
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 121 IKEVLDNRVRPAVARDGGDI--VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+++VL++ VRP + GG++ V V L+ +GACS CPSA +TL G+ L
Sbjct: 297 VEQVLES-VRPYLRGHGGNVKLVELDSEKKTVRLAFKGACSTCPSAHQTLYEGLQGALRE 355
Query: 179 FVPEV 183
P++
Sbjct: 356 VWPDL 360
>gi|224001364|ref|XP_002290354.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973776|gb|EED92106.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 69
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 129 VRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANILNH 178
VRP + DGG++ + G V+L + GAC C S++ T+K G+ +L
Sbjct: 1 VRPYLISDGGNVSVQNVDAGTGNVYLLLEGACGSCASSTVTMKMGIERVLKE 52
>gi|194016950|ref|ZP_03055563.1| YpgR [Bacillus pumilus ATCC 7061]
gi|194011556|gb|EDW21125.1| YpgR [Bacillus pumilus ATCC 7061]
Length = 378
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I + + + ++ ++ E + RI +I G+ VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILTEALAGGKSNNYKKDQKDEAPEMIKRILNIEGVKGVYHVADFLAVER 66
Query: 66 D-QYDWEHLRPPVLGMIMEHF 85
+ ++DW+ +L + E F
Sbjct: 67 NAKFDWQG----ILQQVREAF 83
>gi|118470355|ref|YP_886620.1| hypothetical protein MSMEG_2268 [Mycobacterium smegmatis str. MC2
155]
gi|118171642|gb|ABK72538.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
155]
Length = 295
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 128 RVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+VRP + GGD+ G F+ + GAC+GC ++ TL+ V L V V +
Sbjct: 100 QVRPQLRSHGGDVTLVRIESGTAFVRLEGACNGCSMSAVTLRQLVETALLEGVQGVSKV 158
>gi|322515071|ref|ZP_08068079.1| Fe/S-biogenesis protein NfuA [Actinobacillus ureae ATCC 25976]
gi|322118951|gb|EFX91128.1| Fe/S-biogenesis protein NfuA [Actinobacillus ureae ATCC 25976]
Length = 213
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ ++R+ V+ +V P +A GG + + D L G C+GC TLK
Sbjct: 122 VADDAPFIERLDYVIQTQVNPQLASHGGRVTLIEVTEDKYAILQFGGGCNGCSMVDVTLK 181
Query: 170 YGVANILNHFVPE----VKDI 186
G+ L P+ VKD+
Sbjct: 182 EGIEKQLLAMFPDELVGVKDV 202
>gi|229172900|ref|ZP_04300454.1| hypothetical protein bcere0006_20080 [Bacillus cereus MM3]
gi|228610645|gb|EEK67913.1| hypothetical protein bcere0006_20080 [Bacillus cereus MM3]
Length = 375
Score = 38.9 bits (89), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ ++DW+ L
Sbjct: 67 NAKFDWKVL 75
>gi|332308531|ref|YP_004436382.1| IscR-regulated protein YhgI [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175860|gb|AEE25114.1| IscR-regulated protein YhgI [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 192
Score = 38.9 bits (89), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
++ D+ + +RI ++++ + P +A GG ++ D G L G C+GC TLK
Sbjct: 101 VDDDAPLEERINYMIESEINPQLASHGGKVMLMEITDKGEAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ ++
Sbjct: 161 DGIEKQMLAQFSGELTAVK 179
>gi|223041980|ref|ZP_03612164.1| putative DNA uptake protein [Actinobacillus minor 202]
gi|223017237|gb|EEF15665.1| putative DNA uptake protein [Actinobacillus minor 202]
Length = 199
Score = 38.9 bits (89), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ ++R+ V+ ++ P +A GG + + D L G C+GC TLK
Sbjct: 108 VADDAPFIERLDYVIQTQINPQLASHGGKVTLIEVTEDKFAILQFGGGCNGCSMVDVTLK 167
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L F E+ ++ V
Sbjct: 168 EGIEKQLLLQFPDELAGVKDV 188
>gi|253583865|ref|ZP_04861063.1| predicted protein [Fusobacterium varium ATCC 27725]
gi|251834437|gb|EES63000.1| predicted protein [Fusobacterium varium ATCC 27725]
Length = 92
Score = 38.9 bits (89), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+++I++ LD +RP + + GDI + Y + + L + G C CP + +T + +
Sbjct: 1 MEKIEKFLDEEIRPELQKHNGDISIEEYDEKSKKLVLRLMGQCCTCPHSIDTTENFIKVS 60
Query: 176 LNHFVPEVKDI 186
+ PE++ +
Sbjct: 61 IKEKFPEIETL 71
>gi|240948503|ref|ZP_04752876.1| putative DNA uptake protein [Actinobacillus minor NM305]
gi|240297011|gb|EER47582.1| putative DNA uptake protein [Actinobacillus minor NM305]
Length = 199
Score = 38.9 bits (89), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ ++R+ V+ ++ P +A GG + + D L G C+GC TLK
Sbjct: 108 VADDAPFIERLDYVIQTQINPQLASHGGKVTLIEVTEDKFAILQFGGGCNGCSMVDVTLK 167
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L F E+ ++ V
Sbjct: 168 EGIEKQLLLQFPDELAGVKDV 188
>gi|229161174|ref|ZP_04289161.1| hypothetical protein bcere0009_19630 [Bacillus cereus R309803]
gi|228622270|gb|EEK79109.1| hypothetical protein bcere0009_19630 [Bacillus cereus R309803]
Length = 375
Score = 38.9 bits (89), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++N + + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ ++DW+ L
Sbjct: 67 NAKFDWKVL 75
>gi|32034535|ref|ZP_00134699.1| COG0316: Uncharacterized conserved protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207637|ref|YP_001052862.1| putative DNA uptake protein [Actinobacillus pleuropneumoniae L20]
gi|165975605|ref|YP_001651198.1| putative DNA uptake protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190149420|ref|YP_001967945.1| hypothetical protein APP7_0151 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303249853|ref|ZP_07336057.1| putative DNA uptake protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303251973|ref|ZP_07338144.1| putative DNA uptake protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307247135|ref|ZP_07529187.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307251678|ref|ZP_07533583.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307256174|ref|ZP_07537961.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307262738|ref|ZP_07544365.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|150383442|sp|A3MYM1|NFUA_ACTP2 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767287|sp|B3GZZ1|NFUA_ACTP7 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767288|sp|B0BS54|NFUA_ACTPJ RecName: Full=Fe/S biogenesis protein nfuA
gi|126096429|gb|ABN73257.1| hypothetical protein APL_0149 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|165875706|gb|ABY68754.1| transformation locus protein OrfG-like protein [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|189914551|gb|ACE60803.1| hypothetical protein APP7_0151 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302649403|gb|EFL79588.1| putative DNA uptake protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302651420|gb|EFL81572.1| putative DNA uptake protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306856384|gb|EFM88535.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306860875|gb|EFM92883.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306865355|gb|EFM97251.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306871883|gb|EFN03600.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 199
Score = 38.9 bits (89), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ ++R+ V+ +V P +A GG + + D L G C+GC TLK
Sbjct: 108 VADDAPFIERLDYVIQTQVNPQLASHGGRVTLIEVTEDKYAILQFGGGCNGCSMVDVTLK 167
Query: 170 YGVANILNHFVPE----VKDI 186
G+ L P+ VKD+
Sbjct: 168 EGIEKQLLAMFPDELAGVKDV 188
>gi|312960571|ref|ZP_07775077.1| Fe/S biogenesis protein [Pseudomonas fluorescens WH6]
gi|311285097|gb|EFQ63672.1| Fe/S biogenesis protein [Pseudomonas fluorescens WH6]
Length = 194
Score = 38.9 bits (89), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ +DS V +RI L + P +A GG + + DGI L G C GC A TL+
Sbjct: 104 VNADSPVNERINYYLQTEINPGLASHGGQVSLIDVVEDGIAVLKFGGGCQGCGQADVTLR 163
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ L +PE+K +R V
Sbjct: 164 EGIERTLLERIPELKGVRDV 183
>gi|294676126|ref|YP_003576741.1| nitrogen fixation protein NifU [Rhodobacter capsulatus SB 1003]
gi|294474946|gb|ADE84334.1| nitrogen fixation protein NifU-1 [Rhodobacter capsulatus SB 1003]
Length = 142
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL--- 168
E ++AVV L +RP RDGGDI G V + + G+C+GC ++ TL
Sbjct: 67 EEEAAVVAE----LIAEMRPMFQRDGGDIELIGLTGATVQVRLSGSCAGCMMSARTLSTV 122
Query: 169 KYGVANILNHFVPEVKDIR 187
++ + L V V +IR
Sbjct: 123 QHQLIETLGRPVRVVPEIR 141
>gi|220932338|ref|YP_002509246.1| Thioredoxin-like protein [Halothermothrix orenii H 168]
gi|219993648|gb|ACL70251.1| Thioredoxin-like protein [Halothermothrix orenii H 168]
Length = 84
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
++I+ ++ +RP + DGGDI ++GY++ V + C+ C + L
Sbjct: 5 KKIEHYIEKSIRPRIRVDGGDIKYEGYKNETVIIGAYAGCATCVCCDDRL 54
>gi|119471386|ref|ZP_01613858.1| predicted gluconate transport associated protein [Alteromonadales
bacterium TW-7]
gi|119445662|gb|EAW26946.1| predicted gluconate transport associated protein [Alteromonadales
bacterium TW-7]
Length = 191
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
I D+++ +R++ +L+ V P +A GG + + + G+ L G C+GC TLK
Sbjct: 101 IGDDASLNERVQHMLETEVNPQLANHGGQVSLVEITAAGVAVLQFGGGCNGCSMIDVTLK 160
Query: 170 YGV 172
G+
Sbjct: 161 EGI 163
>gi|218667291|ref|YP_002424638.1| NifU domain protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218519504|gb|ACK80090.1| NifU domain protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 130
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 15/84 (17%)
Query: 106 GSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSAS 165
G D + +AV + ++ V R + RDGGDI + V + M+GAC+GCP+A
Sbjct: 52 GPDDPLPDPAAVAEAVQTV-----RHILHRDGGDIELVEIIERDVRVRMKGACAGCPNAV 106
Query: 166 ETLKY----------GVANILNHF 179
LK GV N+ N F
Sbjct: 107 IDLKQVVERIVGAVPGVVNVSNTF 130
>gi|302343333|ref|YP_003807862.1| nitrogen-fixing NifU domain protein [Desulfarculus baarsii DSM
2075]
gi|301639946|gb|ADK85268.1| nitrogen-fixing NifU domain protein [Desulfarculus baarsii DSM
2075]
Length = 78
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 130 RPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
R +A+ G++ V ++G+V + + GACSGC SA TL+ + L +P+V +
Sbjct: 17 RAELAKHHGNVEVLAVNQEGVVLVRLTGACSGCKSAPLTLRDVIEKSLKARLPQVTRV 74
>gi|198282439|ref|YP_002218760.1| nitrogen-fixing NifU domain-containing protein [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|198246960|gb|ACH82553.1| nitrogen-fixing NifU domain protein [Acidithiobacillus ferrooxidans
ATCC 53993]
Length = 127
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 15/84 (17%)
Query: 106 GSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSAS 165
G D + +AV + ++ V R + RDGGDI + V + M+GAC+GCP+A
Sbjct: 49 GPDDPLPDPAAVAEAVQTV-----RHILHRDGGDIELVEIIERDVRVRMKGACAGCPNAV 103
Query: 166 ETLKY----------GVANILNHF 179
LK GV N+ N F
Sbjct: 104 IDLKQVVERIVGAVPGVVNVSNTF 127
>gi|154173662|ref|YP_001407485.1| NifU family protein [Campylobacter curvus 525.92]
gi|112802143|gb|EAT99487.1| NifU family protein [Campylobacter curvus 525.92]
Length = 330
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGG-----DIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ ++ V+D +RP + DGG DI ++ V++ GACSGC S + Y +
Sbjct: 254 LKAVESVIDQEIRPMLMMDGGNLEILDIRKDNDQNVDVYIRYLGACSGCASGAGGTLYAI 313
Query: 173 ANILNH 178
N+L
Sbjct: 314 ENVLQE 319
>gi|317129652|ref|YP_004095934.1| Scaffold protein Nfu/NifU [Bacillus cellulosilyticus DSM 2522]
gi|315474600|gb|ADU31203.1| Scaffold protein Nfu/NifU [Bacillus cellulosilyticus DSM 2522]
Length = 87
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAK-EAEISPLASRIFSIPGIASVYFGYDFI 61
++ E TPNP +KF +V L EG+ S K ++ LA + I G+ +++ DF+
Sbjct: 5 VRAEPTPNPNAMKFTATEV-LFEGSGSASFKKGDSPDHALAKALLEIDGVDNIFGYQDFV 63
Query: 62 TVGKD-QYDWEHLRPPV 77
TV K+ +W+ L P +
Sbjct: 64 TVNKEADVEWDALLPKI 80
>gi|120403404|ref|YP_953233.1| NifU domain-containing protein [Mycobacterium vanbaalenii PYR-1]
gi|119956222|gb|ABM13227.1| nitrogen-fixing NifU domain protein [Mycobacterium vanbaalenii
PYR-1]
Length = 297
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
R+ + LD+ VRP + GGD+ G DG+V L +G+CS CPS+S TL+ V + +
Sbjct: 94 HRVNDALDS-VRPYLGSHGGDVSLLGVTDGVVRLRFQGSCSSCPSSSVTLELAVQDAILA 152
Query: 179 FVPEVKDIRTV 189
PE+ DI V
Sbjct: 153 AAPEIVDIELV 163
>gi|317008870|gb|ADU79450.1| nifU-like protein [Helicobacter pylori India7]
Length = 326
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVF---KGYRDGI-VFLSMRGACS 159
+G+ + +VQ+IK +V+D +R + DGGD+ K D I V++ GAC
Sbjct: 237 NGELAFREMTMVQKIKAVDKVIDENIRAMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|257095889|ref|YP_003169530.1| Fe-S cluster assembly protein NifU [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048413|gb|ACV37601.1| Fe-S cluster assembly protein NifU [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 294
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
++RI+E L+ +RP++ RD GD+ +++ + GAC GC + TL
Sbjct: 219 IRRIEETLEA-IRPSLQRDHGDVTLVEVDGKKIYVELTGACRGCSMEAATL 268
>gi|255020109|ref|ZP_05292180.1| hypothetical protein ACA_0450 [Acidithiobacillus caldus ATCC 51756]
gi|254970471|gb|EET27962.1| hypothetical protein ACA_0450 [Acidithiobacillus caldus ATCC 51756]
Length = 130
Score = 38.5 bits (88), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 10/61 (16%)
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY----------GVANILNH 178
VR + RDGGDI V + M+GAC+GCP+A L+ GVA + N
Sbjct: 70 VRRILQRDGGDIELVEIAQRDVRVRMKGACAGCPNAVLDLQQVVERIVGAVPGVARVSNT 129
Query: 179 F 179
F
Sbjct: 130 F 130
>gi|167032993|ref|YP_001668224.1| IscR-regulated protein YhgI [Pseudomonas putida GB-1]
gi|254767313|sp|B0KKI2|NFUA_PSEPG RecName: Full=Fe/S biogenesis protein nfuA
gi|166859481|gb|ABY97888.1| IscR-regulated protein YhgI [Pseudomonas putida GB-1]
Length = 194
Score = 38.5 bits (88), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETL 168
+ DS + +RI L + P +A GG + + DGI L G C GC A TL
Sbjct: 103 MVNEDSPINERINYYLQTEINPGLASHGGQVSLVDVVDDGIAVLQFGGGCQGCGQADVTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PE+K +R V
Sbjct: 163 KEGIERTLLERIPELKGVRDV 183
>gi|291484607|dbj|BAI85682.1| hypothetical protein BSNT_03263 [Bacillus subtilis subsp. natto
BEST195]
Length = 377
Score = 38.5 bits (88), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I + + + ++ + P+ I I G+ VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILTEELPAGKSNNYKPEQAEGAPPVIEEILKIDGVKGVYHVADFLAVER 66
Query: 66 D-QYDWEHLRPPVLGMI-MEHFISGD 89
+ +YDW+ + P V ME SG+
Sbjct: 67 NARYDWKDILPQVRTAFGMESAESGE 92
>gi|26989102|ref|NP_744527.1| yhgI protein [Pseudomonas putida KT2440]
gi|148548525|ref|YP_001268627.1| HesB/YadR/YfhF-family protein [Pseudomonas putida F1]
gi|325276843|ref|ZP_08142540.1| HesB/YadR/YfhF-family protein [Pseudomonas sp. TJI-51]
gi|51702172|sp|Q88KB2|NFUA_PSEPK RecName: Full=Fe/S biogenesis protein nfuA
gi|254767312|sp|A5W5N3|NFUA_PSEP1 RecName: Full=Fe/S biogenesis protein nfuA
gi|24983933|gb|AAN67991.1|AE016431_7 yhgI protein [Pseudomonas putida KT2440]
gi|148512583|gb|ABQ79443.1| HesB/YadR/YfhF-family protein [Pseudomonas putida F1]
gi|313499540|gb|ADR60906.1| YhgI [Pseudomonas putida BIRD-1]
gi|324098009|gb|EGB96158.1| HesB/YadR/YfhF-family protein [Pseudomonas sp. TJI-51]
Length = 194
Score = 38.5 bits (88), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETL 168
+ DS + +RI L + P +A GG + + DGI L G C GC A TL
Sbjct: 103 MVNEDSPINERINYYLQTEINPGLASHGGQVSLVDVVDDGIAVLQFGGGCQGCGQADVTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PE+K +R V
Sbjct: 163 KEGIERTLLERIPELKGVRDV 183
>gi|254785693|ref|YP_003073122.1| Fe-S cluster assembly protein NifU [Teredinibacter turnerae T7901]
gi|237687387|gb|ACR14651.1| Fe-S cluster assembly protein NifU [Teredinibacter turnerae T7901]
Length = 317
Score = 38.5 bits (88), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 118 VQRIK--EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASET---LKYGV 172
VQRIK E + +RP + RD GD+ +++ + GACSGC A+ T ++ +
Sbjct: 234 VQRIKVIEKALDEIRPTLQRDHGDVELLDVDGKNIYIKLIGACSGCQLATATVGGIQQKL 293
Query: 173 ANILNHFV 180
L FV
Sbjct: 294 MEALGEFV 301
>gi|317010501|gb|ADU84248.1| nifU-like protein [Helicobacter pylori SouthAfrica7]
Length = 326
Score = 38.5 bits (88), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVF---KGYRDGI-VFLSMRGACS 159
+G+ + +VQ+IK +V+D +R + DGGD+ K D I V++ GAC
Sbjct: 237 NGELAFREMTMVQKIKAVDKVIDENIRAMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|86743152|ref|YP_483552.1| HesB/YadR/YfhF [Frankia sp. CcI3]
gi|86570014|gb|ABD13823.1| HesB/YadR/YfhF [Frankia sp. CcI3]
Length = 206
Score = 38.5 bits (88), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 106 GSGDFIE---SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-------VFLSMR 155
G+ D E +D+ + ++++E+++ +RP + DGGD G V L +
Sbjct: 113 GASDSTERTAADARLREQVEEIMEE-IRPFLRGDGGDAEVVATLAGNGEPGTAEVHLRLT 171
Query: 156 GACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
GAC GC SA+ TL + + L +PE+ + V
Sbjct: 172 GACGGCSSATATLTGVIESRLKEALPEIGRVALV 205
>gi|15611277|ref|NP_222928.1| nifU-like protein [Helicobacter pylori J99]
gi|4154728|gb|AAD05790.1| putative [Helicobacter pylori J99]
Length = 326
Score = 38.5 bits (88), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVF---KGYRDGI-VFLSMRGACS 159
+G+ + +VQ+IK +V+D +R + DGGD+ K D I V++ GAC
Sbjct: 237 NGELAFREMTMVQKIKAVDKVIDENIRAMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|217032835|ref|ZP_03438315.1| hypothetical protein HPB128_176g13 [Helicobacter pylori B128]
gi|298736836|ref|YP_003729366.1| hypothetical protein HPB8_1345 [Helicobacter pylori B8]
gi|216945460|gb|EEC24122.1| hypothetical protein HPB128_176g13 [Helicobacter pylori B128]
gi|298356030|emb|CBI66902.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 326
Score = 38.5 bits (88), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVF---KGYRDGI-VFLSMRGACS 159
+G+ + +VQ+IK +V+D +R + DGGD+ K D I V++ GAC
Sbjct: 237 NGELAFREMTMVQKIKAVDKVIDENIRAMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|208434169|ref|YP_002265835.1| nifU-like protein [Helicobacter pylori G27]
gi|308184024|ref|YP_003928157.1| nifU-like protein [Helicobacter pylori SJM180]
gi|208432098|gb|ACI26969.1| nifU-like protein [Helicobacter pylori G27]
gi|308059944|gb|ADO01840.1| nifU-like protein [Helicobacter pylori SJM180]
Length = 326
Score = 38.5 bits (88), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVF---KGYRDGI-VFLSMRGACS 159
+G+ + +VQ+IK +V+D +R + DGGD+ K D I V++ GAC
Sbjct: 237 NGELAFREMTMVQKIKAVDKVIDENIRAMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|317013664|gb|ADU81100.1| nifU-like protein [Helicobacter pylori Gambia94/24]
Length = 326
Score = 38.5 bits (88), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVF---KGYRDGI-VFLSMRGACS 159
+G+ + +VQ+IK +V+D +R + DGGD+ K D I V++ GAC
Sbjct: 237 NGELAFREMTMVQKIKAVDKVIDENIRAMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|308182394|ref|YP_003926521.1| nifU-like protein [Helicobacter pylori PeCan4]
gi|308064579|gb|ADO06471.1| nifU-like protein [Helicobacter pylori PeCan4]
Length = 326
Score = 38.5 bits (88), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVF---KGYRDGI-VFLSMRGACS 159
+G+ + +VQ+IK +V+D +R + DGGD+ K D I V++ GAC
Sbjct: 237 NGELAFREMTMVQKIKAVDKVIDENIRAMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|307636912|gb|ADN79362.1| iron-sulfur cluster assembly scaffold protein [Helicobacter pylori
908]
gi|325995502|gb|ADZ50907.1| IscU/NifU-like protein [Helicobacter pylori 2018]
gi|325997100|gb|ADZ49308.1| nifU like protein [Helicobacter pylori 2017]
Length = 326
Score = 38.5 bits (88), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVF---KGYRDGI-VFLSMRGACS 159
+G+ + +VQ+IK +V+D +R + DGGD+ K D I V++ GAC
Sbjct: 237 NGELAFREMTMVQKIKAVDKVIDENIRTMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|329894923|ref|ZP_08270722.1| hypothetical protein IMCC3088_1134 [gamma proteobacterium IMCC3088]
gi|328922652|gb|EGG29987.1| hypothetical protein IMCC3088_1134 [gamma proteobacterium IMCC3088]
Length = 191
Score = 38.5 bits (88), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ DS + RI +L N V PA+A GG++ + + D I L G C GC +TLK
Sbjct: 101 VSDDSPIEDRINYILYNEVNPALAAHGGEVSLVEITEDQIAILQFGGGCQGCGMVDQTLK 160
Query: 170 YGVANILNHFVPEVKDIRTV 189
GV L VPE++ +R V
Sbjct: 161 GGVEKSLLEQVPELRGVRDV 180
>gi|108562648|ref|YP_626964.1| nifU-like protein [Helicobacter pylori HPAG1]
gi|107836421|gb|ABF84290.1| nifU-like protein [Helicobacter pylori HPAG1]
Length = 326
Score = 38.5 bits (88), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 107 SGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVF---KGYRDGI-VFLSMRGACS 159
+G+ + +VQ+IK +V+D +R + DGGD+ K D I V++ GAC
Sbjct: 237 NGELAFREMTMVQKIKAVDKVIDENIRAMLMMDGGDLEILDIKESDDYIDVYIRYMGACD 296
Query: 160 GCPSASETLKYGVANILNHFV 180
GC SA+ + + N L +
Sbjct: 297 GCMSATTGTLFAIENALQELL 317
>gi|296113867|ref|YP_003627805.1| nifU-like protein [Moraxella catarrhalis RH4]
gi|295921561|gb|ADG61912.1| nifU-like protein [Moraxella catarrhalis RH4]
gi|326560549|gb|EGE10930.1| nifU-like protein [Moraxella catarrhalis 103P14B1]
gi|326561419|gb|EGE11769.1| nifU-like protein [Moraxella catarrhalis 46P47B1]
gi|326562191|gb|EGE12519.1| nifU-like protein [Moraxella catarrhalis 7169]
gi|326565627|gb|EGE15790.1| nifU-like protein [Moraxella catarrhalis 12P80B1]
gi|326567147|gb|EGE17269.1| nifU-like protein [Moraxella catarrhalis BC1]
gi|326568427|gb|EGE18507.1| nifU-like protein [Moraxella catarrhalis BC7]
gi|326572317|gb|EGE22312.1| nifU-like protein [Moraxella catarrhalis BC8]
gi|326573929|gb|EGE23879.1| nifU-like protein [Moraxella catarrhalis O35E]
gi|326574921|gb|EGE24851.1| nifU-like protein [Moraxella catarrhalis 101P30B1]
gi|326576248|gb|EGE26163.1| nifU-like protein [Moraxella catarrhalis CO72]
Length = 203
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGIVFLSMRGACSGCPSASETLK 169
++++ +RI VL + + P +A GG + V + L G C GC + TL+
Sbjct: 112 NASIEERINYVLQSEINPNLASHGGSVDLLEVIEDEAGLTAVLKFGGGCQGCSAVDVTLR 171
Query: 170 YGVANILNHFVPEVKDI 186
GV L +PE+ +
Sbjct: 172 QGVEVQLKQQIPELTQV 188
>gi|289550836|ref|YP_003471740.1| hypothetical protein SLGD_01522 [Staphylococcus lugdunensis
HKU09-01]
gi|315658333|ref|ZP_07911205.1| scaffold protein Nfu/NifU N [Staphylococcus lugdunensis M23590]
gi|289180368|gb|ADC87613.1| hypothetical protein SLGD_01522 [Staphylococcus lugdunensis
HKU09-01]
gi|315496662|gb|EFU84985.1| scaffold protein Nfu/NifU N [Staphylococcus lugdunensis M23590]
Length = 84
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 7 DTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKD 66
+TPN T+K + + +++A + + +R+F I G+ S+++ DFI+V K+
Sbjct: 8 ETPNQNTIKITLSEKRSDNKSDTYTHAADGQ-PEFINRLFDIEGVTSIFYVMDFISVDKE 66
Query: 67 Q-YDWEHLRPPV 77
DW+ L P +
Sbjct: 67 NDKDWDELIPKI 78
>gi|27468042|ref|NP_764679.1| hypothetical protein SE1124 [Staphylococcus epidermidis ATCC
12228]
gi|57866930|ref|YP_188584.1| hypothetical protein SERP1007 [Staphylococcus epidermidis RP62A]
gi|242242718|ref|ZP_04797163.1| conserved hypothetical protein [Staphylococcus epidermidis
W23144]
gi|251810865|ref|ZP_04825338.1| conserved hypothetical protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876129|ref|ZP_06284996.1| scaffold protein Nfu/NifU N-terminal domain protein
[Staphylococcus epidermidis SK135]
gi|293366594|ref|ZP_06613271.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|27315587|gb|AAO04721.1|AE016747_218 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57637588|gb|AAW54376.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
gi|242233854|gb|EES36166.1| conserved hypothetical protein [Staphylococcus epidermidis
W23144]
gi|251805545|gb|EES58202.1| conserved hypothetical protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295154|gb|EFA87681.1| scaffold protein Nfu/NifU N-terminal domain protein
[Staphylococcus epidermidis SK135]
gi|291319363|gb|EFE59732.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|319400790|gb|EFV89009.1| scaffold Nfu/NifU family protein [Staphylococcus epidermidis
FRI909]
gi|329731570|gb|EGG67932.1| scaffold protein Nfu/NifU N-terminal domain protein
[Staphylococcus epidermidis VCU144]
gi|329735279|gb|EGG71571.1| scaffold protein Nfu/NifU N-terminal domain protein
[Staphylococcus epidermidis VCU045]
gi|329737394|gb|EGG73648.1| scaffold protein Nfu/NifU N-terminal domain protein
[Staphylococcus epidermidis VCU028]
Length = 86
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 7 DTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK- 65
+TPN T+K + + ++ A+E + +R+F I G+ S+++ DFI++ K
Sbjct: 8 ETPNHNTMKVSLSEPRQDNSSTTYTAAQEGQ-PEFINRLFEIEGVKSIFYVLDFISIDKE 66
Query: 66 DQYDWEHLRPPV 77
D +W L P +
Sbjct: 67 DNANWNELLPQI 78
>gi|257460305|ref|ZP_05625408.1| nitrogen fixation protein NifU [Campylobacter gracilis RM3268]
gi|257442370|gb|EEV17510.1| nitrogen fixation protein NifU [Campylobacter gracilis RM3268]
Length = 333
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYR---DGI--VFLSMRGACSGCPSASETLKYGVANI 175
++ VLD +RP + DGG++ R DG +++ GACSGC S + Y + N+
Sbjct: 260 VEGVLDEDIRPMLQMDGGNLDVIDIRPADDGKTDIYIRYLGACSGCASGASGTLYAIENV 319
Query: 176 LN-HFVPEVK 184
L + P ++
Sbjct: 320 LQENLSPNIR 329
>gi|255529963|ref|YP_003090335.1| nitrogen-fixing NifU domain-containing protein [Pedobacter
heparinus DSM 2366]
gi|255342947|gb|ACU02273.1| nitrogen-fixing NifU domain protein [Pedobacter heparinus DSM 2366]
Length = 81
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +++++ L+ +RP + DGGD+ + + +V L + G C C + T+K G+
Sbjct: 3 LTEQVEQALET-IRPYLIADGGDVAIEEITPENVVRLKLLGNCGSCKMSFMTMKAGIEQA 61
Query: 176 LNHFVPEVKDIRTV 189
+ VP++ + V
Sbjct: 62 IMKSVPQITAVEAV 75
>gi|192293449|ref|YP_001994054.1| Fe-S cluster assembly protein NifU [Rhodopseudomonas palustris
TIE-1]
gi|192287198|gb|ACF03579.1| Fe-S cluster assembly protein NifU [Rhodopseudomonas palustris
TIE-1]
Length = 328
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+RP + RDGGD F IV++ + G C GC +S TL A ++ F
Sbjct: 268 LRPHLQRDGGDCEFVSLDGNIVYVRLSGNCVGCQLSSVTLSGVQAKLVEKF 318
>gi|39937667|ref|NP_949943.1| putative nifU protein [Rhodopseudomonas palustris CGA009]
gi|39651526|emb|CAE30049.1| putative nifU protein [Rhodopseudomonas palustris CGA009]
Length = 328
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+RP + RDGGD F IV++ + G C GC +S TL A ++ F
Sbjct: 268 LRPHLQRDGGDCEFVSLDGNIVYVRLSGNCVGCQLSSVTLSGVQAKLVEKF 318
>gi|1709290|sp|Q10373|NIFU2_RHOCA RecName: Full=Nitrogen fixation protein nifU 2
gi|46075|emb|CAA44879.1| nifUII [Rhodobacter capsulatus]
gi|249288|gb|AAA08742.1| NifU2 [Rhodobacter capsulatus]
Length = 142
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL--- 168
E ++AVV L +RP RDGGDI G V + + G+C+GC ++ TL
Sbjct: 67 EEEAAVVAE----LIAEMRPMFQRDGGDIELIGLTGATVQVRLSGSCAGCMMSARTLSTV 122
Query: 169 KYGVANILNHFVPEVKDIR 187
++ + L V V +IR
Sbjct: 123 QHQLIETLGRPVRVVPEIR 141
>gi|302825922|ref|XP_002994529.1| hypothetical protein SELMODRAFT_48861 [Selaginella moellendorffii]
gi|300137483|gb|EFJ04406.1| hypothetical protein SELMODRAFT_48861 [Selaginella moellendorffii]
Length = 126
Score = 38.1 bits (87), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 147 DGIVF-LSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
DG+V L ++GAC CPS+ T+K G+ L +PE+ + V
Sbjct: 5 DGLVVKLKLQGACGSCPSSLMTMKMGIEARLKEKIPEIIGVEQV 48
>gi|229590129|ref|YP_002872248.1| hypothetical protein PFLU2664 [Pseudomonas fluorescens SBW25]
gi|259511745|sp|C3K9S0|NFUA_PSEFS RecName: Full=Fe/S biogenesis protein nfuA
gi|229361995|emb|CAY48896.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 194
Score = 38.1 bits (87), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ +DS V +RI L + P +A GG + + DGI L G C GC A TL+
Sbjct: 104 VNADSPVNERINYYLQTEINPGLASHGGQVSLIDVVDDGIAVLKFGGGCQGCGQADVTLR 163
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ L +PE+K +R V
Sbjct: 164 EGIERTLLERIPELKGVRDV 183
>gi|296329494|ref|ZP_06871981.1| putative lyase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305674819|ref|YP_003866491.1| putative lyase [Bacillus subtilis subsp. spizizenii str. W23]
gi|296153376|gb|EFG94238.1| putative lyase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305413063|gb|ADM38182.1| putative lyase [Bacillus subtilis subsp. spizizenii str. W23]
Length = 377
Score = 38.1 bits (87), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I + + + ++ + P+ + I I G+ VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILTEELPAGKSNNYKPDQAEGAPPVIAEILKIEGVKGVYHVADFLAVER 66
Query: 66 D-QYDWEHLRPPV 77
+ +YDW+ + P V
Sbjct: 67 NARYDWKDILPQV 79
>gi|169827750|ref|YP_001697908.1| hypothetical protein Bsph_2211 [Lysinibacillus sphaericus C3-41]
gi|168992238|gb|ACA39778.1| Hypothetical ypgR protein [Lysinibacillus sphaericus C3-41]
Length = 375
Score = 38.1 bits (87), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E TP+P ++K + + + +F+ + E + A+ I +I GI VY DF
Sbjct: 4 ITIEPTPSPNSMKIVVDTELPFGKSYNFTKDNKDEATGEAAAILAIEGIKGVYHVADFFA 63
Query: 63 VGKD-QYDWEHLRPPVLGMIMEHFISGD-PIIHNGGLGDM 100
V ++ +Y WE + + ++ E + D P++ N G++
Sbjct: 64 VERNAKYAWEGILASIRQVLGEDVETQDEPMVANEFYGEV 103
>gi|134300122|ref|YP_001113618.1| NifU domain-containing protein [Desulfotomaculum reducens MI-1]
gi|134052822|gb|ABO50793.1| nitrogen-fixing NifU domain protein [Desulfotomaculum reducens
MI-1]
Length = 45
Score = 38.1 bits (87), Expect = 0.55, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSG 160
+R++E L+ +VRP + RDGGD+ G + GIV + ++GAC G
Sbjct: 3 ERVQEALE-KVRPFLQRDGGDVELVGVDETSGIVKVKLKGACGG 45
>gi|89095072|ref|ZP_01167999.1| yhgI protein [Oceanospirillum sp. MED92]
gi|89080633|gb|EAR59878.1| yhgI protein [Oceanospirillum sp. MED92]
Length = 197
Score = 38.1 bits (87), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI----VFKGYRDGIVFLSMRGACSGCPSASE 166
+ DS + ++I +L + + P +A GGD+ V + I L G C GC +
Sbjct: 103 VSPDSPIDEQINYILYSEINPGLAAHGGDVKLMEVVEEEEGHIAVLQFGGGCQGCSAVDM 162
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK GV L + + +R V
Sbjct: 163 TLKDGVEATLVERIDSLVGVRDV 185
>gi|182677480|ref|YP_001831626.1| NifU domain-containing protein [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633363|gb|ACB94137.1| nitrogen-fixing NifU domain protein [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 106
Score = 38.1 bits (87), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 101 KLDDMGSGDFIESDSAVVQR--IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGAC 158
K + G+ + + A +R I E +++ +RP + RD GD + VF+ M GAC
Sbjct: 11 KAPEEGAAEVVSDAVAAARRQLIAETIES-IRPNLQRDKGDCELIDVQGDKVFVKMTGAC 69
Query: 159 SGCPSASETL 168
GC +S TL
Sbjct: 70 VGCQLSSMTL 79
>gi|295400424|ref|ZP_06810403.1| nitrogen-fixing NifU domain protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|294977699|gb|EFG53298.1| nitrogen-fixing NifU domain protein [Geobacillus
thermoglucosidasius C56-YS93]
Length = 283
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
R+ L+ VRP + GG + ++ ++GACSGC ++ TLK GV +
Sbjct: 92 RVAAALEE-VRPYMRSHGGGVELVEVEGKTAYVRLQGACSGCSLSAVTLKNGVEEAIKAR 150
Query: 180 VP 181
VP
Sbjct: 151 VP 152
>gi|307244961|ref|ZP_07527058.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307253914|ref|ZP_07535766.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258368|ref|ZP_07540109.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306854126|gb|EFM86334.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306863118|gb|EFM95060.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867552|gb|EFM99399.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 199
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ ++R+ V+ +V P +A GG + + D L G C+GC TLK
Sbjct: 108 VADDAPFIERLDYVIQTQVNPQLASHGGRVTLIEVTEDKYAILQFGGGCNGCSMVDVTLK 167
Query: 170 YGV-ANILNHFVPEVKDIRTV 189
G+ +L F E+ ++ V
Sbjct: 168 EGIEKQLLAMFHDELAGVKDV 188
>gi|28188323|gb|AAL91100.1| NifU [Entamoeba histolytica]
Length = 348
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETLKYGV 172
+ ++ +V + + P V +DGG + +DG IV++ G C GC +A+ K +
Sbjct: 246 ISKLNQVFEQYIDPIVKKDGGSVEVYEVKDGVNGEIIVYIQYSGKCVGCAAANGATKEKI 305
Query: 173 ANIL 176
IL
Sbjct: 306 QTIL 309
>gi|170721075|ref|YP_001748763.1| IscR-regulated protein YhgI [Pseudomonas putida W619]
gi|254767314|sp|B1J6F5|NFUA_PSEPW RecName: Full=Fe/S biogenesis protein nfuA
gi|169759078|gb|ACA72394.1| IscR-regulated protein YhgI [Pseudomonas putida W619]
Length = 194
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETL 168
+ DS + +RI L + P +A GG + + DGI L G C GC A TL
Sbjct: 103 MVNEDSPINERINYYLQTEINPGLASHGGQVSLVDVVDDGIAVLQFGGGCQGCGQADVTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PE+K +R V
Sbjct: 163 KDGIERTLLERIPELKGVRDV 183
>gi|67481077|ref|XP_655888.1| Fe-S cluster assembly protein NifU [Entamoeba histolytica
HM-1:IMSS]
gi|21654852|gb|AAK85709.1| iron-sulfur cluster NifU-like protein [Entamoeba histolytica]
gi|56473060|gb|EAL50508.1| Fe-S cluster assembly protein NifU, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 348
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETLKYGV 172
+ ++ +V + + P V +DGG + +DG IV++ G C GC +A+ K +
Sbjct: 246 ISKLNQVFEQYIDPIVKKDGGSVEVYEVKDGVNGEIIVYIQYSGKCVGCAAANGATKEKI 305
Query: 173 ANIL 176
IL
Sbjct: 306 QTIL 309
>gi|330503471|ref|YP_004380340.1| HesB/YadR/YfhF family protein [Pseudomonas mendocina NK-01]
gi|328917757|gb|AEB58588.1| HesB/YadR/YfhF-family protein [Pseudomonas mendocina NK-01]
Length = 194
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETL 168
+ DS + +RI L + P +A GG + D GI L G C GC A TL
Sbjct: 103 MVNEDSPLNERINYYLQTEINPGLASHGGQVSLVDVVDEGIAVLQFGGGCQGCGQADYTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PE+K +R V
Sbjct: 163 KEGIEKTLLERIPELKGVRDV 183
>gi|104782423|ref|YP_608921.1| hypothetical protein PSEEN3379 [Pseudomonas entomophila L48]
gi|122402793|sp|Q1I898|NFUA_PSEE4 RecName: Full=Fe/S biogenesis protein nfuA
gi|95111410|emb|CAK16130.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 194
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETL 168
+ DS + +RI L + P +A GG + + DGI L G C GC A TL
Sbjct: 103 MVNEDSPINERINYYLQTEINPGLASHGGAVSLVDVVDDGIAVLQFGGGCQGCGQADVTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PE+K +R V
Sbjct: 163 KEGIERTLLERIPELKGVRDV 183
>gi|154244065|ref|YP_001415023.1| NifU domain-containing protein [Xanthobacter autotrophicus Py2]
gi|154158150|gb|ABS65366.1| nitrogen-fixing NifU domain protein [Xanthobacter autotrophicus
Py2]
Length = 121
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
I+EV++ +RP + RDGGD V + M GAC C ASET++
Sbjct: 21 IREVIEE-IRPNLKRDGGDCELVEIDGNKVMVKMTGACVFCKLASETIE 68
>gi|17228187|ref|NP_484735.1| hypothetical protein alr0692 [Nostoc sp. PCC 7120]
gi|17130037|dbj|BAB72649.1| alr0692 [Nostoc sp. PCC 7120]
Length = 158
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANI 175
++QR++ L+ VRP + GD+ + V + G CS CP+++ TL GV
Sbjct: 85 LLQRVQAALEE-VRPGLKDHHGDVELVAIKPPDTVEVRFIGTCSSCPASTLTLSQGVEQA 143
Query: 176 LNHFVPEV 183
+ PE+
Sbjct: 144 IKALCPEI 151
>gi|73662619|ref|YP_301400.1| hypothetical protein SSP1310 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123775356|sp|Q49XP0|CVFC_STAS1 RecName: Full=Conserved virulence factor C
gi|72495134|dbj|BAE18455.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 372
Score = 37.7 bits (86), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + ++ + + + + ++ G+ S+++ DF+
Sbjct: 4 VRVEPTPSPNTMKIVLNEKRKDNKSNTYTTILDNQ-PKFINDVLAVDGVKSIFYVMDFLA 62
Query: 63 VGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMK 101
V K +YDWE L P V + + S D + G++K
Sbjct: 63 VDKKPKYDWEVLLPKVTATLSDESESIDTPAPDEHFGEVK 102
>gi|317128638|ref|YP_004094920.1| Scaffold protein Nfu/NifU [Bacillus cellulosilyticus DSM 2522]
gi|315473586|gb|ADU30189.1| Scaffold protein Nfu/NifU [Bacillus cellulosilyticus DSM 2522]
Length = 372
Score = 37.7 bits (86), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISP-LASRIFSIPGIASVYFGYDF 60
I E TP+P T+K Q L +G H + +E +P +F + G+ VY DF
Sbjct: 3 IISVEPTPSPNTMKLTLSQ-SLPQGKAHNYTKETSEGAPSFVQDLFKVEGVKGVYHVADF 61
Query: 61 ITVGKD-QYDWEHLRPPVLGMIME 83
I V + + DW+ + P V + E
Sbjct: 62 IAVERHPKVDWKVILPEVRAVFGE 85
>gi|128317|sp|P23121|NIFU_AZOCH RecName: Full=Nitrogen fixation protein nifU
gi|142387|gb|AAA22159.1| nifU [Azotobacter chroococcum]
Length = 309
Score = 37.7 bits (86), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
++RI+ VL +RP + RD GD+ +++ + GAC+GC AS TL
Sbjct: 231 IRRIETVLAA-IRPTLQRDKGDVELIDVDGKNIYVKLTGACTGCQMASMTL 280
>gi|312111050|ref|YP_003989366.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y4.1MC1]
gi|311216151|gb|ADP74755.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y4.1MC1]
Length = 283
Score = 37.7 bits (86), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
VRP + GG + ++ ++GACSGC ++ TLK GV + VP
Sbjct: 100 VRPYMRSHGGGVELVEVEGKTAYVRLQGACSGCSLSAVTLKNGVEEAIKARVP 152
>gi|229916484|ref|YP_002885130.1| Scaffold protein Nfu/NifU [Exiguobacterium sp. AT1b]
gi|229467913|gb|ACQ69685.1| Scaffold protein Nfu/NifU [Exiguobacterium sp. AT1b]
Length = 82
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVEGAIHFS-NAKEAEISPLASRIFSIPGIASVYFGYDF 60
++ + TPNP +K + V GA S A EA PL +++ I G+ SV+ DF
Sbjct: 1 MLRIDPTPNPNAMKVTLPENVF--GAKSQSVKAGEATDQPLLAKLVEIEGVESVFAYGDF 58
Query: 61 ITVGKDQ-YDWEHLRPPV 77
+TV K+ WE + P V
Sbjct: 59 VTVSKENGVSWEAILPHV 76
>gi|326385392|ref|ZP_08207036.1| nitrogen fixation protein nifU [Novosphingobium nitrogenifigens DSM
19370]
gi|326210109|gb|EGD60882.1| nitrogen fixation protein nifU [Novosphingobium nitrogenifigens DSM
19370]
Length = 307
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
++ I+E L++ +RP++ RDGGD V + + GAC GC +S T++
Sbjct: 234 IRLIEETLES-IRPSLQRDGGDCELVDVEGNRVMVKLTGACVGCHLSSATIE 284
>gi|321311654|ref|YP_004203941.1| putative lyase [Bacillus subtilis BSn5]
gi|320017928|gb|ADV92914.1| putative lyase [Bacillus subtilis BSn5]
Length = 377
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I + + + ++ + P+ + I I G+ VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILTEELPAGKSNNYKPEQAEGAPPVIADILKIDGVKGVYHVADFLAVER 66
Query: 66 D-QYDWEHLRPPV 77
+ +YDW+ + P V
Sbjct: 67 NARYDWKDILPQV 79
>gi|126462944|ref|YP_001044058.1| NifU domain-containing protein [Rhodobacter sphaeroides ATCC 17029]
gi|126104608|gb|ABN77286.1| nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides ATCC
17029]
Length = 246
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
I EV+++ VRP + DGGD+ V + + GACSGC A+ TL
Sbjct: 168 IAEVIES-VRPRLRADGGDVTLVAVEGSKVRVHLTGACSGCQLAALTL 214
>gi|254457488|ref|ZP_05070916.1| nitrogen fixation protein NifU [Campylobacterales bacterium GD 1]
gi|207086280|gb|EDZ63564.1| nitrogen fixation protein NifU [Campylobacterales bacterium GD 1]
Length = 324
Score = 37.4 bits (85), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 117 VVQRIKEV---LDNRVRPAVARDGGDI----VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+VQ+IK V +D VR + DGGD+ + KG +++ GAC+GC S+S
Sbjct: 245 LVQQIKAVDAVIDESVRQFLVMDGGDMEVIDIKKGDEYIDIYIRYLGACNGCASSSTGTL 304
Query: 170 YGVANILNHFVPEVKDIRTV 189
Y + + L + K+IR +
Sbjct: 305 YAIESTLKEKLS--KNIRVL 322
>gi|289209036|ref|YP_003461102.1| nitrogen-fixing NifU domain protein [Thioalkalivibrio sp. K90mix]
gi|288944667|gb|ADC72366.1| nitrogen-fixing NifU domain protein [Thioalkalivibrio sp. K90mix]
Length = 299
Score = 37.4 bits (85), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 130 RPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
R + +DGGDI F V + ++GAC GCP ++ LK V ++ P V +
Sbjct: 239 RRILMQDGGDIEFVELDGRTVRVRLKGACVGCPRSTLDLKNVVERLVRSRAPGVASV 295
>gi|77464100|ref|YP_353604.1| nitrogen fixation protein [Rhodobacter sphaeroides 2.4.1]
gi|266628|sp|Q01180|NIFU_RHOSH RecName: Full=Nitrogen fixation protein nifU
gi|151967|gb|AAA26136.1| nifU [Rhodobacter sphaeroides]
gi|77388518|gb|ABA79703.1| Nitrogen fixation protein [Rhodobacter sphaeroides 2.4.1]
Length = 246
Score = 37.4 bits (85), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
I EV+++ VRP + DGGD+ V + + GACSGC A+ TL
Sbjct: 168 IAEVIES-VRPRLRADGGDVTLVAVEGSKVRVHLTGACSGCQLAALTL 214
>gi|332558975|ref|ZP_08413297.1| nitrogen fixation protein [Rhodobacter sphaeroides WS8N]
gi|332276687|gb|EGJ22002.1| nitrogen fixation protein [Rhodobacter sphaeroides WS8N]
Length = 246
Score = 37.4 bits (85), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
I EV+++ VRP + DGGD+ V + + GACSGC A+ TL
Sbjct: 168 IAEVIES-VRPRLRADGGDVTLVAVEGSKVRVHLTGACSGCQLAALTL 214
>gi|323703949|ref|ZP_08115578.1| nitrogen-fixing NifU domain protein [Desulfotomaculum nigrificans
DSM 574]
gi|323531084|gb|EGB20994.1| nitrogen-fixing NifU domain protein [Desulfotomaculum nigrificans
DSM 574]
Length = 44
Score = 37.4 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSG 160
+++KE L+ ++RP + RDGGD+ D G+V + +RGAC G
Sbjct: 3 EKVKEALE-KIRPFLQRDGGDVELVDVDDNGVVKVKLRGACGG 44
>gi|212639454|ref|YP_002315974.1| HEAT repeats containing protein [Anoxybacillus flavithermus WK1]
gi|212560934|gb|ACJ33989.1| HEAT repeats containing protein [Anoxybacillus flavithermus WK1]
Length = 379
Score = 37.4 bits (85), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
M IQ E TP+P T+K + + + + ++ ++ + + ++ I G+ +Y D
Sbjct: 1 MKIQAIEPTPSPNTMKVLLDEELPFGTSYNYKPSQAEQAPEIIQQLLKIEGVKGIYHVAD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHF------ISGDPIIHNGGLGDMKL 102
F+ V + +YDW+ P+L + E F + + + N G++K+
Sbjct: 61 FLAVERHAKYDWK----PILTKVREVFGEQVEPLQENKAVRNDHFGEVKV 106
>gi|146307188|ref|YP_001187653.1| HesB/YadR/YfhF-family protein [Pseudomonas mendocina ymp]
gi|254767311|sp|A4XUA5|NFUA_PSEMY RecName: Full=Fe/S biogenesis protein nfuA
gi|145575389|gb|ABP84921.1| HesB/YadR/YfhF-family protein [Pseudomonas mendocina ymp]
Length = 194
Score = 37.4 bits (85), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETL 168
+ DS + +RI L + P +A GG + + +GI L G C GC A TL
Sbjct: 103 MVNEDSPLNERINYYLQTEINPGLASHGGQVSLVDVVEEGIAVLRFGGGCQGCGQADYTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PE+K +R V
Sbjct: 163 KEGIEKTLLERIPELKGVRDV 183
>gi|75120873|sp|Q6DW75|DGDG2_SOYBN RecName: Full=Digalactosyldiacylglycerol synthase 2, chloroplastic
gi|49617331|gb|AAT67421.1| digalactosyldiacylglycerol synthase 2 [Glycine max]
Length = 463
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 93 HNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFL 152
H L +++D GSG+ DS VQ+ E L+ VR ARD D +F Y+ +FL
Sbjct: 253 HEKELSALEVDLFGSGE----DSDEVQKAAEKLELAVRVHPARDHADALFHDYK---LFL 305
Query: 153 SMRGACSGCPSASETLKYG 171
+ C + +E L G
Sbjct: 306 NPSTTDVVCTTTAEALAMG 324
>gi|163783768|ref|ZP_02178753.1| hypothetical protein HG1285_09916 [Hydrogenivirga sp. 128-5-R1-1]
gi|159880957|gb|EDP74476.1| hypothetical protein HG1285_09916 [Hydrogenivirga sp. 128-5-R1-1]
Length = 83
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
+++VL+ ++RPA+ G + DG+V+L G CS CP +LK
Sbjct: 9 VEKVLE-KIRPALKDHQGSLKIVNIEDGVVYLQFVGGCSDCPVVDVSLK 56
>gi|226946904|ref|YP_002801977.1| NifU C-terminal domain-containing protein AnfU [Azotobacter
vinelandii DJ]
gi|226721831|gb|ACO81002.1| NifU C-terminal domain-containing protein, AnfU [Azotobacter
vinelandii DJ]
Length = 96
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Query: 127 NRVRPAVARDGGD---IVFKGYRDGIVFLSMRGACSGCPSASETL 168
R+RP + DGGD + GY+ V L ++G C+GC ++ ETL
Sbjct: 29 ERLRPGLQADGGDMEIVSIDGYK---VRLRLKGMCAGCTASGETL 70
>gi|146282569|ref|YP_001172722.1| yhgI protein [Pseudomonas stutzeri A1501]
gi|254767315|sp|A4VLM9|NFUA_PSEU5 RecName: Full=Fe/S biogenesis protein nfuA
gi|145570774|gb|ABP79880.1| yhgI protein [Pseudomonas stutzeri A1501]
gi|327480826|gb|AEA84136.1| yhgI protein [Pseudomonas stutzeri DSM 4166]
Length = 194
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETL 168
+ DS + +RI L + P +A GG + +GI L G C GC A TL
Sbjct: 103 MVNEDSPMNERINYYLQTEINPGLASHGGQVTLIDVVEEGIAVLQFGGGCQGCGQADVTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PE+K +R V
Sbjct: 163 KEGIEKTLLARIPELKGVRDV 183
>gi|91975564|ref|YP_568223.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris BisB5]
gi|91682020|gb|ABE38322.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris BisB5]
Length = 331
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
I E LD +RP + RDGGD +V++ + G C GC +S TL
Sbjct: 264 IAEALDE-LRPHLKRDGGDCELVNVEGNVVYVRLSGNCVGCQLSSLTL 310
>gi|316936083|ref|YP_004111065.1| Fe-S cluster assembly protein NifU [Rhodopseudomonas palustris
DX-1]
gi|315603797|gb|ADU46332.1| Fe-S cluster assembly protein NifU [Rhodopseudomonas palustris
DX-1]
Length = 329
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+RP + RDGGD F IV++ + G C GC +S TL A + F
Sbjct: 269 LRPHLQRDGGDCEFVSLDGNIVYVRLTGNCVGCQLSSVTLSGVQARLAEKF 319
>gi|147678467|ref|YP_001212682.1| hypothetical protein PTH_2132 [Pelotomaculum thermopropionicum SI]
gi|146274564|dbj|BAF60313.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
Length = 47
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSG 160
A+ ++++EVL N+VRP + RDGGD+ G+V + ++GAC G
Sbjct: 3 AMKEKVQEVL-NKVRPFLQRDGGDVELVDVDASGLVKVRLKGACGG 47
>gi|221639965|ref|YP_002526227.1| nitrogen fixation protein nifU [Rhodobacter sphaeroides KD131]
gi|221160746|gb|ACM01726.1| Nitrogen fixation protein nifU [Rhodobacter sphaeroides KD131]
Length = 246
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
I EV+++ VRP + DGGD+ V + + GACSGC A+ TL
Sbjct: 168 IAEVIES-VRPRLRADGGDVTLVAVEGSKVRVHLTGACSGCQLAALTL 214
>gi|7387939|sp|Q43909|NIFU_AZOBR RecName: Full=Nitrogen fixation protein nifU
gi|1597738|gb|AAC46176.1| nifU [Azospirillum brasilense]
Length = 310
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 118 VQRIKEVL--DNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
VQR+++++ RP + RDGGD+ +++ + GACSGC ++ T+
Sbjct: 231 VQRMQKIMFAIEDWRPQIQRDGGDVELVDIDGKDIYVRLTGACSGCSQSAGTM 283
>gi|152975403|ref|YP_001374920.1| HEAT repeat-containing PBS lyase [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152024155|gb|ABS21925.1| PBS lyase HEAT domain protein repeat-containing protein [Bacillus
cytotoxicus NVH 391-98]
Length = 375
Score = 37.0 bits (84), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I +V+ +++ + I I GI VY DF+ V +
Sbjct: 7 EPTPSPNTMKVILNEVLPAGARNNYTKENVDQAPEQVQHILKIEGIKGVYHVADFLAVER 66
Query: 66 D-QYDWEHL 73
+ +YDW+ L
Sbjct: 67 NAKYDWKVL 75
>gi|57864874|gb|AAW57048.1| nitrogen fixation protein U [cyanobacterium endosymbiont of
Rhopalodia gibba]
Length = 110
Score = 37.0 bits (84), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 7/64 (10%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I+++L V+PA A+DGGD+ D ++++GACS S++ TL+ + + L +
Sbjct: 48 IQKILKEEVKPAPAQDGGDV------DLFNKVTLKGACSSFMSSAATLENAIKSRLRDCI 101
Query: 181 -PEV 183
PE+
Sbjct: 102 SPEL 105
>gi|110636942|ref|YP_677149.1| hypothetical protein CHU_0522 [Cytophaga hutchinsonii ATCC 33406]
gi|110279623|gb|ABG57809.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
Length = 265
Score = 37.0 bits (84), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 11/147 (7%)
Query: 35 EAEISPLASRIFSIPGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIM------EHFISG 88
E + L R+ + G ++ F F T +Y R + + + EH ++G
Sbjct: 39 ETPVQALTLRLTPMAGADTLKFNTSFTTENNVRYTLASFRYYMSDIRLVKKDGTEHALAG 98
Query: 89 DPIIHNGGLGDMKLDDMGSGDFIESDSAV-VQRIKEVLDNRVRPA---VARDGGDIVFKG 144
++ N D L ++ +GD+ AV + + D V PA +A I +
Sbjct: 99 KVLLINANTSDYALGNVPAGDYAGIRFAVGLDAVTNHADPTVYPAAHPLAIQSPGIHW-S 157
Query: 145 YRDGIVFLSMRGACSGCPSASETLKYG 171
+ G +FLSM G C ++ L +G
Sbjct: 158 WNSGYIFLSMEGTCDTTAVNNDVLTFG 184
>gi|209696309|ref|YP_002264240.1| putative DNA uptake protein [Aliivibrio salmonicida LFI1238]
gi|254767289|sp|B6ENV8|NFUA_ALISL RecName: Full=Fe/S biogenesis protein nfuA
gi|208010263|emb|CAQ80595.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
Length = 194
Score = 37.0 bits (84), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ + +R++ + +V P +A GG + + + GI + G C+GC TLK
Sbjct: 103 VNDDAPLFERVEYAIQTQVNPQLAGHGGHVSLMEITEAGIAIVQFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ ++
Sbjct: 163 EGIEKELLAQFEGELTAVK 181
>gi|59713068|ref|YP_205844.1| putative DNA uptake protein [Vibrio fischeri ES114]
gi|197336442|ref|YP_002157246.1| IscR-regulated protein YhgI [Vibrio fischeri MJ11]
gi|75353229|sp|Q5E1Z0|NFUA_VIBF1 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767334|sp|B5FCD0|NFUA_VIBFM RecName: Full=Fe/S biogenesis protein nfuA
gi|59481169|gb|AAW86956.1| predicted gluconate transport associated protein [Vibrio fischeri
ES114]
gi|197317932|gb|ACH67379.1| IscR-regulated protein YhgI [Vibrio fischeri MJ11]
Length = 194
Score = 37.0 bits (84), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ + +R++ + +V P +A GG + D G+ + G C+GC TLK
Sbjct: 103 VADDAPLFERVEYAIQTQVNPQLAGHGGHVSLMEINDEGVAIVQFGGGCNGCSMVDVTLK 162
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ ++
Sbjct: 163 EGIEKELLVQFEGELTAVK 181
>gi|15617137|ref|NP_240350.1| hypothetical protein BU544 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219682444|ref|YP_002468828.1| iron-sulfur cluster scaffold protein (YhgI) [Buchnera aphidicola
str. Tuc7 (Acyrthosiphon pisum)]
gi|11387308|sp|P57609|NFUA_BUCAI RecName: Full=Fe/S biogenesis protein nfuA
gi|254767293|sp|B8D868|NFUA_BUCAT RecName: Full=Fe/S biogenesis protein nfuA
gi|25356744|pir||D84993 hypothetical protein [imported] - Buchnera sp. (strain APS)
gi|10039202|dbj|BAB13236.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon
pisum)]
gi|219622177|gb|ACL30333.1| iron-sulfur cluster scaffold protein (YhgI) [Buchnera aphidicola
str. Tuc7 (Acyrthosiphon pisum)]
gi|311086840|gb|ADP66921.1| iron-sulfur cluster scaffold protein (YhgI) [Buchnera aphidicola
str. TLW03 (Acyrthosiphon pisum)]
gi|311087429|gb|ADP67509.1| iron-sulfur cluster scaffold protein (YhgI) [Buchnera aphidicola
str. JF99 (Acyrthosiphon pisum)]
gi|311087919|gb|ADP67998.1| iron-sulfur cluster scaffold protein (YhgI) [Buchnera aphidicola
str. JF98 (Acyrthosiphon pisum)]
Length = 192
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
S++ +++K L+ + P ++ GG + + K ++GI + G C+GC TLK V
Sbjct: 106 SSLEEKVKCFLNLEINPQLSMHGGRVELIKIDKNGIAAIQFSGGCNGCSMIGSTLKETVE 165
Query: 174 NILNHFVPEVKDI 186
L E+K +
Sbjct: 166 KKLLSSFSEIKKV 178
>gi|311086265|gb|ADP66347.1| iron-sulfur cluster scaffold protein (YhgI) [Buchnera aphidicola
str. LL01 (Acyrthosiphon pisum)]
Length = 192
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
S++ +++K L+ + P ++ GG + + K ++GI + G C+GC TLK V
Sbjct: 106 SSLEEKVKCFLNLEINPQLSMHGGRVELIKIDKNGIAAIQFSGGCNGCSMIGSTLKETVE 165
Query: 174 NILNHFVPEVKDI 186
L E+K +
Sbjct: 166 KKLLSSFSEIKKV 178
>gi|57505685|ref|ZP_00371611.1| nifU protein homolog Cj0239c [Campylobacter upsaliensis RM3195]
gi|57015958|gb|EAL52746.1| nifU protein homolog Cj0239c [Campylobacter upsaliensis RM3195]
Length = 323
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGD---IVFKGYRDGIVFLSMR--GACSGCPSASETLKYGV 172
++ ++ VLD +RP + DGGD I + G + + +R GAC GC S + Y +
Sbjct: 247 LKAVEAVLDAEIRPMLQGDGGDMEVIDLQKAEGGAIDIYIRYLGACGGCSSGTGATLYAI 306
Query: 173 ANILNH 178
+IL
Sbjct: 307 ESILQE 312
>gi|170292214|pdb|2K1H|A Chain A, Solution Nmr Structure Of Ser13 From Staphylococcus
Epidermidis. Northeast Structural Genomics Consortium
Target Ser13
Length = 94
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 7 DTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK- 65
+TPN T+K + ++ A+E + +R+F I G+ S+++ DFI++ K
Sbjct: 8 ETPNHNTMKVSLSEPRQDNSFTTYTAAQEGQ-PEFINRLFEIEGVKSIFYVLDFISIDKE 66
Query: 66 DQYDWEHLRPPV 77
D +W L P +
Sbjct: 67 DNANWNELLPQI 78
>gi|508310|gb|AAA22184.1| nitrogen fixation protein [Azospirillum brasilense]
Length = 307
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 117 VVQRIKEVL--DNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
QR++ ++ +RP + RDGGD+ +++ + GACSGC ++ ++
Sbjct: 229 TCQRMRRIMFAIEELRPQIQRDGGDVELVDIDGKDIYVRLTGACSGCSQSAASM 282
>gi|50955615|ref|YP_062903.1| hypothetical protein Lxx21000 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50952097|gb|AAT89798.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 156
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 33/73 (45%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
D ++ + ++LD + GG DG+V L + G C CP+A +T+ +
Sbjct: 72 DESLRAALVQLLDGAAGDFIRSHGGRPTIVSVHDGVVTLRLGGTCGACPAAGQTVATRIT 131
Query: 174 NILNHFVPEVKDI 186
L PEV+ +
Sbjct: 132 AQLRESHPEVRCV 144
>gi|242372428|ref|ZP_04818002.1| excinuclease subunit A [Staphylococcus epidermidis M23864:W1]
gi|242349850|gb|EES41451.1| excinuclease subunit A [Staphylococcus epidermidis M23864:W1]
Length = 752
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 67/151 (44%), Gaps = 34/151 (22%)
Query: 24 VEGAIHF-----SNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQYDW-------- 70
++ A+HF SN + I PL ++ ++ Y G +++T+ ++
Sbjct: 288 IDDAVHFLENINSNTAKVIIEPLKQQLQALS-----YIGLNYLTLSRETTSLSGGESQRI 342
Query: 71 ---EHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDM--------GSGDFIESDSAVVQ 119
HL P+ ++ +I +P + +++DM + +E D V+Q
Sbjct: 343 KLIRHLNSPLSDLV---YIIDEPSVGLHPEDIQRINDMIQSLKEKGNTVLVVEHDPDVIQ 399
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIV 150
V+D + P +DGG+I+F+G DG++
Sbjct: 400 TADHVID--IGPNAGKDGGEIMFEGTYDGLL 428
>gi|213865552|ref|ZP_03387671.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 169
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
+ D+ +++R++ L +++ P +A GG + D G L G C+GC TLK
Sbjct: 101 VADDAPLMERVEYALQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV 172
G+
Sbjct: 161 EGI 163
>gi|195952780|ref|YP_002121070.1| nitrogen-fixing NifU domain protein [Hydrogenobaculum sp. Y04AAS1]
gi|195932392|gb|ACG57092.1| nitrogen-fixing NifU domain protein [Hydrogenobaculum sp. Y04AAS1]
Length = 83
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
+Q ++ +L +RPA+ G++ +D +V+L G CS CP ++K
Sbjct: 5 LQEVERIL-QMIRPALDTHHGNLKLVDVKDNVVYLQFEGGCSDCPVVDMSVK 55
>gi|187250848|ref|YP_001875330.1| Fe-S cluster assembly protein NifU [Elusimicrobium minutum Pei191]
gi|186971008|gb|ACC97993.1| Fe-S cluster assembly protein NifU [Elusimicrobium minutum Pei191]
Length = 284
Score = 36.6 bits (83), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
A V+ ++ VL+ VRP + DGG + V + + GAC GC A T+K + +
Sbjct: 211 AKVKAVEAVLEKDVRPKLNMDGGSVELVDIEGTNVKVKLLGACRGCMGAQGTIKMIIESA 270
Query: 176 L 176
L
Sbjct: 271 L 271
>gi|149278153|ref|ZP_01884291.1| hypothetical protein PBAL39_11367 [Pedobacter sp. BAL39]
gi|149230919|gb|EDM36300.1| hypothetical protein PBAL39_11367 [Pedobacter sp. BAL39]
Length = 100
Score = 36.6 bits (83), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANI 175
+ Q++++ L+ +RP + DGG++ + + +V L + G C C + T+K G+
Sbjct: 22 LTQQVEQALET-IRPYLIADGGNVEIEEITAENVVKLKLLGNCGSCKMSFMTMKAGIEQA 80
Query: 176 LNHFVPEVKDIRTV 189
+ VP++ + V
Sbjct: 81 ILKAVPQITSVVAV 94
>gi|46445797|ref|YP_007162.1| putative iron-sulfur cluster assembly protein nifU [Candidatus
Protochlamydia amoebophila UWE25]
gi|46399438|emb|CAF22887.1| putative iron-sulfur cluster assembly protein nifU [Candidatus
Protochlamydia amoebophila UWE25]
Length = 263
Score = 36.6 bits (83), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 118 VQRIKEVLDNRVRPAVARD-GGDIVFKGYRDGIVFLSMRGACSGCPSAS-ETLKY 170
+ I+EVLD VRP + D GG +V D + ++ +G+C+ C SA+ TL Y
Sbjct: 184 INLIEEVLDRDVRPYIELDAGGVVVLDLVNDWELHIAYQGSCTSCFSATGTTLSY 238
>gi|89101041|ref|ZP_01173882.1| YpgR [Bacillus sp. NRRL B-14911]
gi|89084243|gb|EAR63403.1| YpgR [Bacillus sp. NRRL B-14911]
Length = 424
Score = 36.6 bits (83), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I + + + + ++ K + I I GI VY DF+ V +
Sbjct: 55 EPTPSPNTMKIILDEELPMGKSNNYKKDKTDGAPKVVLDILQIEGIKGVYHVADFLAVER 114
Query: 66 D-QYDWEHLRPPV 77
+ ++DW+ L P V
Sbjct: 115 NAKFDWKELLPQV 127
>gi|297624836|ref|YP_003706270.1| nitrogen-fixing NifU domain-containing protein [Truepera
radiovictrix DSM 17093]
gi|297166016|gb|ADI15727.1| nitrogen-fixing NifU domain protein [Truepera radiovictrix DSM
17093]
Length = 198
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
D V QR++EVLD + P VA GG + ++ + G C GC +A TL+ G+
Sbjct: 99 DDPVAQRVQEVLDRIINPGVASHGGHVSLAKVEGDAAYVLLGGGCQGCGAADITLRQGIE 158
Query: 174 NILNHFVPEVKDI 186
+ VPE+K +
Sbjct: 159 EAICSAVPEIKRV 171
>gi|73662618|ref|YP_301399.1| hypothetical protein SSP1309 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495133|dbj|BAE18454.1| hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 85
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIH----FSNAKEAEISPLASRIFSIPGIASVYFGY 58
++ TPNP T+K V+ + G + F+ K+ + + I I GI S++
Sbjct: 4 LEVSQTPNPNTMKI----VLQLSGEDYKPNTFTAVKDNQ-PEFINDILQIEGIKSIFQAM 58
Query: 59 DFITVGKD-QYDWEHLRPPVLGMIME 83
+FI+V K Y+WE L P V + E
Sbjct: 59 NFISVDKKADYEWETLLPEVTKTLKE 84
>gi|237741635|ref|ZP_04572116.1| predicted protein [Fusobacterium sp. 4_1_13]
gi|294785755|ref|ZP_06751043.1| nitrogen fixation protein NifU [Fusobacterium sp. 3_1_27]
gi|229429283|gb|EEO39495.1| predicted protein [Fusobacterium sp. 4_1_13]
gi|294487469|gb|EFG34831.1| nitrogen fixation protein NifU [Fusobacterium sp. 3_1_27]
Length = 105
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+I++ LD +RP + GGDI Y + L ++G C CP + ET + + +
Sbjct: 7 KIEKFLDKEIRPYLKSHGGDIEIINYSIEKQELNLRLKGQCCVCPHSIETNENFIKKSIV 66
Query: 178 HFVPEVKDI 186
E+K+I
Sbjct: 67 EKFSEIKNI 75
>gi|109900531|ref|YP_663786.1| putative DNA uptake protein [Pseudoalteromonas atlantica T6c]
gi|119370611|sp|Q15N06|NFUA_PSEA6 RecName: Full=Fe/S biogenesis protein nfuA
gi|109702812|gb|ABG42732.1| HesB/YadR/YfhF [Pseudoalteromonas atlantica T6c]
Length = 192
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLK 169
++ D+ + +RI +++ + P +A GG ++ + G L G C+GC TLK
Sbjct: 101 VDDDAPLEERINYMIEAEINPQLASHGGKVMLMEITEKGEAILQFGGGCNGCSMVDVTLK 160
Query: 170 YGV-ANILNHFVPEVKDIR 187
G+ +L F E+ ++
Sbjct: 161 DGIEKQMLAQFSGELTAVK 179
>gi|34763076|ref|ZP_00144048.1| NifU-like protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27887244|gb|EAA24343.1| NifU-like protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 105
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +I++ LD +RP + GGDI Y + L ++G C CP + ET + +
Sbjct: 5 MDKIEKFLDKEIRPYLKSHGGDIEIINYSIEKKELNLRLKGQCCVCPHSIETNENFIKKS 64
Query: 176 LNHFVPEVKDI 186
+ E+K+I
Sbjct: 65 IVEKFSEIKNI 75
>gi|206576904|ref|YP_002237557.1| Fe-S cluster assembly protein NifU [Klebsiella pneumoniae 342]
gi|288934473|ref|YP_003438532.1| Fe-S cluster assembly protein NifU [Klebsiella variicola At-22]
gi|290508675|ref|ZP_06548046.1| Fe-S cluster assembly protein NifU [Klebsiella sp. 1_1_55]
gi|206565962|gb|ACI07738.1| Fe-S cluster assembly protein NifU [Klebsiella pneumoniae 342]
gi|255761126|gb|ACU32726.1| Fe-S cluster assembly protein NifU [Klebsiella variicola At-22]
gi|289778069|gb|EFD86066.1| Fe-S cluster assembly protein NifU [Klebsiella sp. 1_1_55]
Length = 279
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
N +RP + DGGD+ V +S+ G+CSGC TL +
Sbjct: 213 NELRPHIQADGGDMTLLNVTPRQVTVSLSGSCSGCMMTDMTLAW 256
>gi|126653245|ref|ZP_01725363.1| hypothetical protein BB14905_04073 [Bacillus sp. B14905]
gi|126589996|gb|EAZ84124.1| hypothetical protein BB14905_04073 [Bacillus sp. B14905]
Length = 375
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E TP+P ++K + + + +F+ + E + A+ I +I GI VY DF
Sbjct: 4 ITIEPTPSPNSMKIVVDTELPFGKSYNFTKDNKDEATGEAAAILAIEGIKGVYHVADFFA 63
Query: 63 VGKD-QYDWEHLRPPVLGMIMEHFISGDPII 92
V ++ +Y WE + + ++ E + D I
Sbjct: 64 VERNAKYAWEGILASIRQVLGEDVETQDETI 94
>gi|162146272|ref|YP_001600731.1| nitrogen fixation protein nifU [Gluconacetobacter diazotrophicus
PAl 5]
gi|209543724|ref|YP_002275953.1| Fe-S cluster assembly protein NifU [Gluconacetobacter
diazotrophicus PAl 5]
gi|11034776|gb|AAG27073.1|AF105225_9 NifU [Gluconacetobacter diazotrophicus PAl 5]
gi|161784847|emb|CAP54390.1| Nitrogen fixation protein nifU [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531401|gb|ACI51338.1| Fe-S cluster assembly protein NifU [Gluconacetobacter
diazotrophicus PAl 5]
Length = 309
Score = 36.2 bits (82), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
++ I+EVL+ +RPA+ DGGD D V + + GAC C A+ T++
Sbjct: 236 IRAIEEVLEE-LRPALRNDGGDCELVDVEDNRVMVRLTGACVNCQLAAVTVQ 286
>gi|219681889|ref|YP_002468275.1| iron-sulfur cluster scaffold protein (YhgI) [Buchnera aphidicola
str. 5A (Acyrthosiphon pisum)]
gi|257471594|ref|ZP_05635593.1| iron-sulfur cluster scaffold protein (YhgI) [Buchnera aphidicola
str. LSR1 (Acyrthosiphon pisum)]
gi|254767292|sp|B8D9W6|NFUA_BUCA5 RecName: Full=Fe/S biogenesis protein nfuA
gi|219624732|gb|ACL30887.1| iron-sulfur cluster scaffold protein (YhgI) [Buchnera aphidicola
str. 5A (Acyrthosiphon pisum)]
Length = 192
Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
S++ +++K L+ + P ++ GG + + K +GI + G C+GC TLK V
Sbjct: 106 SSLEEKVKCFLNLEINPQLSMHGGRVELMKIDENGIAAIQFSGGCNGCSMIGSTLKETVE 165
Query: 174 NILNHFVPEVKDI 186
L E+K +
Sbjct: 166 KKLLSSFSEIKKV 178
>gi|152992899|ref|YP_001358620.1| hypothetical protein SUN_1310 [Sulfurovum sp. NBC37-1]
gi|151424760|dbj|BAF72263.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 116
Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+D + Q +K L + V V GG I G ++G V++ + G C GC + T K V
Sbjct: 4 NDQDIYQAVKHHLPS-VNEYVESHGGAIKLLGVKNGTVYIELTGTCHGCSMSLMTTKMVV 62
Query: 173 ANILNHFV-PEV 183
L + PE+
Sbjct: 63 QKKLRELIHPEL 74
>gi|288918993|ref|ZP_06413335.1| iron-sulfur cluster assembly accessory protein [Frankia sp. EUN1f]
gi|288349639|gb|EFC83874.1| iron-sulfur cluster assembly accessory protein [Frankia sp. EUN1f]
Length = 206
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDI----VFKGYRD---GIVFLSMRGACSGCPSA 164
E+D+ + ++++V+ +RP + DGGD+ V G V + + GAC+GC SA
Sbjct: 122 EADAKLRAQVEDVM-AEIRPFLQGDGGDVQVVTVLAGNGQPGTAEVHIRLVGACNGCSSA 180
Query: 165 SETLKYGVANILNHFVPEVKDIRTV 189
S T+ + + +PE+ + V
Sbjct: 181 SATVTAVIEKRIKESLPEIGRVALV 205
>gi|15895944|ref|NP_349293.1| maltodextrin glucosidase [Clostridium acetobutylicum ATCC 824]
gi|15025718|gb|AAK80633.1|AE007766_6 Possible maltodextrin glucosidase [Clostridium acetobutylicum ATCC
824]
gi|325510096|gb|ADZ21732.1| putative maltodextrin glucosidase [Clostridium acetobutylicum EA
2018]
Length = 451
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 36 AEISPLASRIFSIPGIASVYFGYDF-ITVGKDQYDWEHLRP 75
A I P+ + +F+IPGI S+Y+G DF IT K ++LRP
Sbjct: 295 ANIYPIYTILFTIPGIPSIYYGSDFGITGVKQNNSDKYLRP 335
>gi|159898290|ref|YP_001544537.1| non-specific serine/threonine protein kinase [Herpetosiphon
aurantiacus ATCC 23779]
gi|159891329|gb|ABX04409.1| Non-specific serine/threonine protein kinase [Herpetosiphon
aurantiacus ATCC 23779]
Length = 1055
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 23/114 (20%)
Query: 13 TLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITV----GKDQY 68
TL+F P Q+ L++G +H ++ + + +I GIA F V K Y
Sbjct: 545 TLRFAPTQITLLDGLLHNTDQVDPTFKQRLQGLKTINGIAPQPLPSGFAGVLRSYQKAGY 604
Query: 69 DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIK 122
DW H ++ G G DDMG+G I++ A +Q +K
Sbjct: 605 DWLHF------------------LYKYGFGGCLADDMGTGKTIQT-LAFLQSLK 639
>gi|146277303|ref|YP_001167462.1| NifU domain-containing protein [Rhodobacter sphaeroides ATCC 17025]
gi|145555544|gb|ABP70157.1| nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides ATCC
17025]
Length = 241
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
I EV++ VRP + DGGD+ V + + GACSGC A+ TL
Sbjct: 163 IAEVIET-VRPRLRADGGDVTLLAVDGSKVRVHLTGACSGCQLAALTL 209
>gi|312114730|ref|YP_004012326.1| nitrogen-fixing NifU domain protein [Rhodomicrobium vannielii ATCC
17100]
gi|311219859|gb|ADP71227.1| nitrogen-fixing NifU domain protein [Rhodomicrobium vannielii ATCC
17100]
Length = 98
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
I+E ++ +RP + RDGGD V + M GAC GC AS T+ A I+
Sbjct: 28 IRETIEE-LRPHLKRDGGDCELLEVEGNFVKVRMTGACVGCQLASVTVHGIQAKIIAKL 85
>gi|256844964|ref|ZP_05550422.1| predicted protein [Fusobacterium sp. 3_1_36A2]
gi|256718523|gb|EEU32078.1| predicted protein [Fusobacterium sp. 3_1_36A2]
Length = 101
Score = 35.8 bits (81), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+I++ LD +RP + GG+I Y + L ++G C CP + ET + + +
Sbjct: 3 KIEKFLDREIRPYLKSHGGNIEIINYSIERQELNLRLKGQCCVCPHSMETNENFIKKSIL 62
Query: 178 HFVPEVKDI 186
P++K+I
Sbjct: 63 EKFPKIKNI 71
>gi|256823357|ref|YP_003147320.1| IscR-regulated protein YhgI [Kangiella koreensis DSM 16069]
gi|256796896|gb|ACV27552.1| IscR-regulated protein YhgI [Kangiella koreensis DSM 16069]
Length = 192
Score = 35.8 bits (81), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLK 169
++ D+ RI+ L++ + P +A GG + + + GI L G C GC TLK
Sbjct: 102 VDDDAPATDRIRYYLESEINPELANHGGQVSLVEFTQSGIAVLQFGGGCQGCGMVDVTLK 161
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ L VPEVK ++ V
Sbjct: 162 EGIEKTLIERVPEVKGVKDV 181
>gi|205374729|ref|ZP_03227523.1| NifU-like protein [Bacillus coahuilensis m4-4]
Length = 48
Score = 35.8 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 147 DGIVFLSMRGACSGCPSASETLKYGVANIL 176
DG+V L + GAC CPS++ TLK G+ L
Sbjct: 5 DGVVKLRLLGACGSCPSSTITLKAGIERAL 34
>gi|120434575|ref|YP_860268.1| NifU-like/thioredoxin-like protein [Gramella forsetii KT0803]
gi|117576725|emb|CAL65194.1| protein containing NifU-like domain / thioredoxin-like protein
[Gramella forsetii KT0803]
Length = 54
Score = 35.8 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 19/23 (82%)
Query: 154 MRGACSGCPSASETLKYGVANIL 176
++GACSGCPS++ TLK G+ +L
Sbjct: 16 LQGACSGCPSSTMTLKSGIETML 38
>gi|319955766|ref|YP_004167029.1| bfd domain protein (2fe-2S)-binding domain protein [Nitratifractor
salsuginis DSM 16511]
gi|319418170|gb|ADV45280.1| BFD domain protein (2Fe-2S)-binding domain protein [Nitratifractor
salsuginis DSM 16511]
Length = 320
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDG----IVFLSMRGACSGCPSASETLKYGVANIL 176
I V+D +R + DGGD+ ++ +++ GACSGC SAS + + IL
Sbjct: 248 INAVIDEHIRAMLVMDGGDMEILDVKENGEHTDLYIRYLGACSGCASASTGTLFAIEGIL 307
Query: 177 NH 178
Sbjct: 308 KQ 309
>gi|257470226|ref|ZP_05634317.1| hypothetical protein FulcA4_12862 [Fusobacterium ulcerans ATCC
49185]
gi|317064440|ref|ZP_07928925.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
gi|313690116|gb|EFS26951.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
Length = 92
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+I++ LD +RP + + GDI + Y ++ + L + G C CP + +T + + +
Sbjct: 3 KIEKFLDEEIRPELRKHNGDISVEEYDEKNRKLVLRLMGQCCTCPHSIDTSENFIKISVR 62
Query: 178 HFVPEVK 184
PE++
Sbjct: 63 EKFPEIE 69
>gi|317053470|ref|YP_004119237.1| Fe-S cluster assembly protein NifU [Pantoea sp. At-9b]
gi|255761147|gb|ACU32746.1| Fe-S cluster assembly protein [Pantoea sp. At-9b]
gi|316953209|gb|ADU72681.1| Fe-S cluster assembly protein NifU [Pantoea sp. At-9b]
Length = 274
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
Q + E + +RP + DGGD+ + V +S+ G+CSGC TL +
Sbjct: 206 QDVMETI-TELRPHIQADGGDMSLVNVANHTVTVSLTGSCSGCMMTDMTLAW 256
>gi|297616852|ref|YP_003702011.1| nitrogen-fixing NifU domain protein [Syntrophothermus lipocalidus
DSM 12680]
gi|297144689|gb|ADI01446.1| nitrogen-fixing NifU domain protein [Syntrophothermus lipocalidus
DSM 12680]
Length = 102
Score = 35.4 bits (80), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 34/68 (50%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ + ++L +V P + GD+ F D V + ++GAC C +A T++ + +
Sbjct: 3 ETLVKLLAEKVTPYLQMHAGDVEFVDVVDNCVSIRLKGACQDCSAAQITVETVIKEAIVS 62
Query: 179 FVPEVKDI 186
PE++ +
Sbjct: 63 RFPEIEKV 70
>gi|288556161|ref|YP_003428096.1| hypothetical protein BpOF4_15775 [Bacillus pseudofirmus OF4]
gi|288547321|gb|ADC51204.1| hypothetical protein BpOF4_15775 [Bacillus pseudofirmus OF4]
Length = 378
Score = 35.4 bits (80), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAK-EAEISPLASRIFSIPGIASVYFGYDF 60
+ E TP+P T+K + L +G+ + N K + E +F+I G+ SVY DF
Sbjct: 3 ILSIEPTPSPNTMKLTLSES-LGQGSRNSYNEKNKGEAPEYIQELFNIEGVKSVYHVADF 61
Query: 61 ITVGKD-QYDWEHLRPPV 77
+ + + + DW+ + P V
Sbjct: 62 LAIDRHPKVDWKVILPKV 79
>gi|128319|sp|P05343|NIFU_KLEPN RecName: Full=Nitrogen fixation protein nifU
gi|43830|emb|CAA31674.1| unnamed protein product [Klebsiella pneumoniae]
gi|43879|emb|CAA31117.1| nifU gene product (AA 1 - 274) [Klebsiella pneumoniae]
Length = 274
Score = 35.4 bits (80), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 128 RVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
+RP + DGGD+ + V +S+ G+CSGC TL +
Sbjct: 214 ELRPHIQADGGDMALLSVTNHQVTVSLSGSCSGCMMTDMTLAW 256
>gi|227496737|ref|ZP_03927011.1| NifU domain protein [Actinomyces urogenitalis DSM 15434]
gi|226833752|gb|EEH66135.1| NifU domain protein [Actinomyces urogenitalis DSM 15434]
Length = 177
Score = 35.4 bits (80), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
+E+ + V GG + DG+V +++ GAC CP+A T+ ++L P
Sbjct: 109 REIAEGPVGQIARAHGGSFTVQRVADGVVKVALEGACQDCPAAVVTMHARFEHLLRRRCP 168
Query: 182 EVKDIR 187
+ +R
Sbjct: 169 WLVSVR 174
>gi|86748105|ref|YP_484601.1| nitrogen-fixing NifU-like protein [Rhodopseudomonas palustris HaA2]
gi|86571133|gb|ABD05690.1| Nitrogen-fixing NifU-like protein [Rhodopseudomonas palustris HaA2]
Length = 333
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+ E L++ +RP + RDGGD +V++ + G C GC +S TL
Sbjct: 266 VAEALED-LRPHLQRDGGDCELVSVEGNVVYVRLSGNCVGCQLSSVTL 312
>gi|149343|gb|AAA25155.1| nifU encoded protein [Klebsiella pneumoniae]
Length = 274
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 128 RVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
+RP + DGGD+ + V +S+ G+CSGC TL +
Sbjct: 214 ELRPHIQADGGDMALLSVTNHQVTVSLSGSCSGCMMTDMTLAW 256
>gi|56963807|ref|YP_175538.1| hypothetical protein ABC2042 [Bacillus clausii KSM-K16]
gi|56910050|dbj|BAD64577.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 372
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 15/85 (17%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGA----IHFSNAKEAEISPLASRIFSIPGIASVY 55
M+I++ E TP+P T+K + L E A + +AE ++F I GI VY
Sbjct: 1 MYIRSIEPTPSPNTMK-----INLSEAAAGTSTTYQEKNKAEAPTFIQQLFDIEGIKQVY 55
Query: 56 FGYDFITVGKDQY---DWEHLRPPV 77
DF+ V D+Y DW+ + P +
Sbjct: 56 HVGDFLAV--DRYPKADWKAILPQI 78
>gi|50121870|ref|YP_051037.1| nitrogen fixation protein [Pectobacterium atrosepticum SCRI1043]
gi|49612396|emb|CAG75846.1| nitrogen fixation protein [Pectobacterium atrosepticum SCRI1043]
Length = 279
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 128 RVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
+RP + DGGD+ D V +S+ G+C GC TL +
Sbjct: 216 ELRPYIQADGGDMALLNVSDHQVTVSLSGSCQGCMMTDMTLAW 258
>gi|313683642|ref|YP_004061380.1| nitrogen-fixing nifu domain protein [Sulfuricurvum kujiense DSM
16994]
gi|313156502|gb|ADR35180.1| nitrogen-fixing NifU domain protein [Sulfuricurvum kujiense DSM
16994]
Length = 324
Score = 35.0 bits (79), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 104 DMGS-GDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDG----IVFLSMR 155
D GS GDF +VQ+IK V+D +R + DGG++ +D V++
Sbjct: 233 DAGSHGDF--EAMTLVQKIKAIDSVIDESIRQFLIMDGGNMEVIDIKDSPDYIDVYIRYL 290
Query: 156 GACSGCPSASETLKYGVANILNHFVPE 182
GAC+GC S+S Y + L + +
Sbjct: 291 GACNGCASSSTGTLYAIEATLKEKLSQ 317
>gi|288818611|ref|YP_003432959.1| nitrogen-fixing NifU domain protein [Hydrogenobacter thermophilus
TK-6]
gi|288788011|dbj|BAI69758.1| nitrogen-fixing NifU domain protein [Hydrogenobacter thermophilus
TK-6]
gi|308752202|gb|ADO45685.1| nitrogen-fixing NifU domain protein [Hydrogenobacter thermophilus
TK-6]
Length = 83
Score = 35.0 bits (79), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 122 KEVLD--NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
+EV D ++RPA+ GD+ ++G V+L G C+ CP +LK
Sbjct: 7 REVEDILKKMRPALKDHHGDLKVVEIKEGNVYLQFEGGCTECPIVDASLK 56
>gi|170741742|ref|YP_001770397.1| Fe-S cluster assembly protein NifU [Methylobacterium sp. 4-46]
gi|168196016|gb|ACA17963.1| Fe-S cluster assembly protein NifU [Methylobacterium sp. 4-46]
Length = 329
Score = 35.0 bits (79), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 118 VQRIKEVLDNRV---RPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+QRI+ ++D + RP + RDGGD +V + + GAC GC AS T+
Sbjct: 256 MQRIR-LIDKAIEALRPVLQRDGGDCELVEVEGTVVSVRLSGACVGCQMASVTV 308
>gi|291546160|emb|CBL19268.1| Glycosidases [Ruminococcus sp. SR1/5]
Length = 583
Score = 35.0 bits (79), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 28 IHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQYDWEHLRPPV 77
IH +A +P+ ++++PG+ S+Y+G +F GK ++ LRP +
Sbjct: 282 IHTKLQNKAHFAPVHVLLYTLPGVPSIYYGSEFGIDGKRKFSDASLRPAL 331
>gi|114321604|ref|YP_743287.1| HesB/YadR/YfhF-family protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114227998|gb|ABI57797.1| HesB/YadR/YfhF-family protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 211
Score = 35.0 bits (79), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVA-RDGGDIVFKGYRDGIVFL 152
GG MK + ++ ++ +RI VL+ + P +A DG V + G +
Sbjct: 89 RGGRLTMKAPNAARLPEPDAMQSLEERITHVLETEINPDLAAHDGSVTVERVDEQGRALI 148
Query: 153 SMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
G C GC +TL V L VP + IR V
Sbjct: 149 RFAGGCQGCAVVDQTLTGLVEKTLLARVPALTGIRDV 185
>gi|284929173|ref|YP_003421695.1| Fe-S cluster assembly protein NifU [cyanobacterium UCYN-A]
gi|213578831|gb|ACJ53725.1| Fe-S cluster assembly protein NifU [cyanobacterium UCYN-A]
Length = 294
Score = 35.0 bits (79), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
I++VL+ V+PA+A+DGGD+ ++ + ++GACS C S++ TLK +
Sbjct: 226 IQQVLEEEVKPALAKDGGDVELFDIEGNLIKVVLKGACSSCSSSTFTLKTAI 277
>gi|71278620|ref|YP_266987.1| putative DNA uptake protein [Colwellia psychrerythraea 34H]
gi|119370607|sp|Q48AC6|NFUA_COLP3 RecName: Full=Fe/S biogenesis protein nfuA
gi|71144360|gb|AAZ24833.1| HesB-like domain/NifU-like domain protein [Colwellia
psychrerythraea 34H]
Length = 192
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVF-KGYRDGIVFLSMRGACSGCPSASETLK 169
+ D+ + +R+ L V P +A GG+ + DG L G C+GC T+K
Sbjct: 101 VADDAPLFERVHYFLQAEVNPQLAGHGGECTLVEITDDGYAVLQFGGGCNGCAQIDVTVK 160
Query: 170 YGVANILNHFVP-EVKDIR 187
G+ L + E+K ++
Sbjct: 161 DGIEKQLIELMAGEIKGVK 179
>gi|289548747|ref|YP_003473735.1| nitrogen-fixing NifU domain protein [Thermocrinis albus DSM 14484]
gi|289182364|gb|ADC89608.1| nitrogen-fixing NifU domain protein [Thermocrinis albus DSM 14484]
Length = 83
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
E + ++RPA+ G++ R+G ++L G C+ CP ++K
Sbjct: 10 EAVLEKIRPALKEHHGNLKVVDIREGEIYLQFEGGCTDCPIVDASVK 56
>gi|323143850|ref|ZP_08078516.1| putative IscR-regulated protein YhgI [Succinatimonas hippei YIT
12066]
gi|322416368|gb|EFY07036.1| putative IscR-regulated protein YhgI [Succinatimonas hippei YIT
12066]
Length = 196
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYGV 172
D+ + R+K + V PA+A GG + DG+V + G C+GC TLK G+
Sbjct: 108 DATLFDRVKRFFETTVNPALAGHGGAAALEEVTEDGVVKVRFSGGCNGCSMVGITLKEGI 167
Query: 173 ANILNHFVP-EVKDI 186
+ LN P +KD+
Sbjct: 168 QSQLNQAFPGMIKDV 182
>gi|111221823|ref|YP_712617.1| hypothetical protein FRAAL2394 [Frankia alni ACN14a]
gi|111149355|emb|CAJ61043.1| hypothetical protein FRAAL2394 [Frankia alni ACN14a]
Length = 180
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+R+ ++ R+RPAV GG+I G G+ +S+ GC SA+ + V +
Sbjct: 80 RRVARAIE-RLRPAVRDRGGEIELVGIERGVAEISL--TLGGCGSAAGEVLAAVREAVLA 136
Query: 179 FVPEVKDIR 187
PE+ D+R
Sbjct: 137 VAPELSDVR 145
>gi|158318602|ref|YP_001511110.1| iron-sulfur cluster assembly accessory protein [Frankia sp.
EAN1pec]
gi|158114007|gb|ABW16204.1| iron-sulfur cluster assembly accessory protein [Frankia sp.
EAN1pec]
Length = 206
Score = 34.7 bits (78), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDI----VFKGYRD---GIVFLSMRGACSGCPSA 164
E+D + ++++V+ +RP + DGGD+ V G + V + + GAC+GC SA
Sbjct: 122 EADDRLRGQVEDVI-AEIRPFLQGDGGDVQLVTVLAGNGEPGTAEVHIRLVGACNGCSSA 180
Query: 165 SETLKYGVANILNHFVPEVKDIRTV 189
S T+ + + +PE+ + V
Sbjct: 181 SATVTAVIEKRIKESLPEIGRVALV 205
>gi|297520132|ref|ZP_06938518.1| putative DNA uptake protein [Escherichia coli OP50]
Length = 70
Score = 34.7 bits (78), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 146 RDGIVFLSMRGACSGCPSASETLKYGV-ANILNHFVPEVKDIR 187
DG L G C+GC TLK G+ +LN F PE+K +R
Sbjct: 16 EDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEF-PELKGVR 57
>gi|52786069|ref|YP_091898.1| YpgR [Bacillus licheniformis ATCC 14580]
gi|163119502|ref|YP_079487.2| rhodopsin-like GPCR superfamily protein [Bacillus licheniformis
ATCC 14580]
gi|319645345|ref|ZP_07999578.1| YpgR protein [Bacillus sp. BT1B_CT2]
gi|52348571|gb|AAU41205.1| YpgR [Bacillus licheniformis ATCC 14580]
gi|145903009|gb|AAU23849.2| Rhodopsin-like GPCR superfamily protein [Bacillus licheniformis
ATCC 14580]
gi|317393154|gb|EFV73948.1| YpgR protein [Bacillus sp. BT1B_CT2]
Length = 378
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TP+P T+K I + + + ++ P+ + +I G+ VY DFI V +
Sbjct: 7 EPTPSPNTMKVILTEELPGGKSNNYKKDHAEGAPPVIQEVLNIDGVKGVYHVADFIAVER 66
Query: 66 D-QYDWEHLRPPV 77
+ ++DW+ + P V
Sbjct: 67 NARFDWKDILPKV 79
>gi|298373186|ref|ZP_06983176.1| Fe-S cluster assembly protein NifU [Bacteroidetes oral taxon 274
str. F0058]
gi|298276090|gb|EFI17641.1| Fe-S cluster assembly protein NifU [Bacteroidetes oral taxon 274
str. F0058]
Length = 93
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++ ++ VRP + GGDI V + + GACS CPS T++ + + L
Sbjct: 6 KVNHIVAETVRPILRSHGGDIEVVEVEGKNVKVRLLGACSSCPSMQNTMEEIIESTLRQ 64
>gi|162449342|ref|YP_001611709.1| NifU domain-containing protein [Sorangium cellulosum 'So ce 56']
gi|161159924|emb|CAN91229.1| nifU domain protein [Sorangium cellulosum 'So ce 56']
Length = 87
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
A + ++ +V + P V DGG++ + L + GACSGCP A T + +
Sbjct: 3 ASIDQLLKVCREVIAPLVRADGGELYIVAVEPDHLTLHLAGACSGCPGAMLTARAVIEPA 62
Query: 176 LNHFVPEVKDIRT 188
+ P + I T
Sbjct: 63 VLAVAPSARVIVT 75
>gi|85859113|ref|YP_461315.1| poly A polymerase [Syntrophus aciditrophicus SB]
gi|85722204|gb|ABC77147.1| poly A polymerase [Syntrophus aciditrophicus SB]
Length = 495
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 101 KLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGAC-- 158
+LD +GS ++S +Q+ +E+ D ++RP G D++ GY G +F + A
Sbjct: 404 RLDCLGSNGVLDSYEYCLQKQRELTDEQLRPPPLLRGKDLLEMGYLPGALFREILNAVED 463
Query: 159 ---SGCPSASETLKYGVANILNHFVPEVKD 185
+G + E + V N H ++ D
Sbjct: 464 AQLNGSIATPEEARQLVKNRWPHRRIQISD 493
>gi|119475888|ref|ZP_01616240.1| hypothetical protein GP2143_04845 [marine gamma proteobacterium
HTCC2143]
gi|119450515|gb|EAW31749.1| hypothetical protein GP2143_04845 [marine gamma proteobacterium
HTCC2143]
Length = 203
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ +DS + RI VL N V P++A GG++ + + + + L G C GC TLK
Sbjct: 112 VNADSPLEDRINYVLYNEVNPSLASHGGEVSLLEVTEEKVAILQFGGGCQGCGMVEATLK 171
Query: 170 YGVANILNHFVPEVKDIR 187
GV L +PE+ +R
Sbjct: 172 DGVEKSLMEQIPELTAVR 189
>gi|4325122|gb|AAD17270.1| NifV [Frankia sp. EuIK1]
Length = 206
Score = 34.3 bits (77), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-------VFLSMRGACSGCPSA 164
E+D + ++++V+ +RP + DGGD+ G V + + GAC+GC SA
Sbjct: 122 EADERLRGQVEDVIA-EIRPFLQGDGGDVQLVTVLAGNGQPGTAEVHIRLVGACNGCSSA 180
Query: 165 SETLKYGVANILNHFVPEVKDIRTV 189
S T+ + + +PE+ + V
Sbjct: 181 SATVTAVIEKRIKESLPEIGRVALV 205
>gi|159905099|ref|YP_001548761.1| hypothetical protein MmarC6_0712 [Methanococcus maripaludis C6]
gi|159886592|gb|ABX01529.1| conserved hypothetical protein [Methanococcus maripaludis C6]
Length = 586
Score = 34.3 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 58 YDFITVGKDQYDWEHLRPPV--LGMIMEHFISGD-PIIHNGGLGDMKLDDMGSGDFIESD 114
Y+ I + KDQ E + V +EH + P N L DM+L+ + SGDF E++
Sbjct: 22 YNTIDLQKDQIITETIATAVDLKSSSLEHVVETSIPTAFNKVLNDMELEVIQSGDFYENE 81
Query: 115 SAVVQRIKEVLDNRV 129
S V+ ++ LD+ +
Sbjct: 82 SEVITDLENRLDSEM 96
>gi|254510059|ref|ZP_05122126.1| metallo-beta-lactamase family protein [Rhodobacteraceae bacterium
KLH11]
gi|221533770|gb|EEE36758.1| metallo-beta-lactamase family protein [Rhodobacteraceae bacterium
KLH11]
Length = 287
Score = 34.3 bits (77), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 10/72 (13%)
Query: 10 NPATLKFIPGQVVLVEGAI----------HFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
PA L ++ G V + F A++ +I S+P ++ G+D
Sbjct: 146 TPACLTYVIGDAAFVGDTLFMPDFGTARCDFPGGSSADLYASIQKILSLPDETRIFVGHD 205
Query: 60 FITVGKDQYDWE 71
+ G+D+Y WE
Sbjct: 206 YKAPGRDEYAWE 217
>gi|332796697|ref|YP_004458197.1| group 1 glycosyl transferase [Acidianus hospitalis W1]
gi|332694432|gb|AEE93899.1| glycosyl transferase group 1 [Acidianus hospitalis W1]
Length = 352
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 74 RPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD-SAVVQRIKEVLDNRVRPA 132
R P LG+I E G P+I N GLG +L G F+ D + RI E L+N + +
Sbjct: 265 RGPGLGVI-EAMAYGVPVIVNEGLGSKELIKQGENGFVVRDWEEAIDRINETLENWHKMS 323
Query: 133 V 133
V
Sbjct: 324 V 324
>gi|296171394|ref|ZP_06852727.1| NifU domain protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894169|gb|EFG73928.1| NifU domain protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 187
Score = 34.3 bits (77), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 23/47 (48%)
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
E+L V A GG I V + M GAC GCP+AS TL+
Sbjct: 103 ELLAGPVGALAASHGGSIELVSVAGHTVTVRMMGACDGCPAASSTLR 149
>gi|119963151|ref|YP_946666.1| NifU-like domain-containing protein [Arthrobacter aurescens TC1]
gi|119950010|gb|ABM08921.1| putative NifU-like domain protein [Arthrobacter aurescens TC1]
Length = 134
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
++E L + +RP + GD+ DG+V + AC CP+ S T V + L V
Sbjct: 14 LQEAL-SYIRPLLKGHSGDLTIAAVDDGVVTVDFHNACHSCPAISVTFAGLVRSRLMQ-V 71
Query: 181 PEVKDIRT 188
VKD+R+
Sbjct: 72 DGVKDVRS 79
>gi|292493232|ref|YP_003528671.1| exosortase 1 system-associated amidotransferase 1 [Nitrosococcus
halophilus Nc4]
gi|291581827|gb|ADE16284.1| exosortase 1 system-associated amidotransferase 1 [Nitrosococcus
halophilus Nc4]
Length = 655
Score = 33.9 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 96 GLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR 146
GL D +L D+ + +S + R+ E+ RV+ A++ DGGD +F GYR
Sbjct: 326 GLVD-RLADVYDEPYADSSAMPTYRVCELARQRVKVALSGDGGDELFAGYR 375
Searching..................................................done
Results from round 2
>gi|126730479|ref|ZP_01746290.1| nifU domain protein [Sagittula stellata E-37]
gi|126709212|gb|EBA08267.1| nifU domain protein [Sagittula stellata E-37]
Length = 187
Score = 290 bits (742), Expect = 8e-77, Method: Composition-based stats.
Identities = 99/190 (52%), Positives = 134/190 (70%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A A SPLA R+F++ G+ ++FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLDMGTADFPSADAAGASPLAQRLFAVDGVTGIFFGNDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D DW+H++P +LG IMEHF SG P++ +G G + D +V
Sbjct: 61 VTVTKADTVDWDHMKPAILGAIMEHFQSGQPVMSDGA-----AQAGGHAEHEGEDGEIVG 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|99078069|ref|YP_611327.1| nitrogen-fixing NifU-like [Ruegeria sp. TM1040]
gi|99035207|gb|ABF62065.1| nitrogen-fixing NifU-like protein [Ruegeria sp. TM1040]
Length = 187
Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats.
Identities = 100/190 (52%), Positives = 136/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA RIF++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLDAGTADFPSAEAASKSPLAQRIFAVSGVTGVFFGNDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD +W+H++P VLG +MEH+ SG P+I+ G + G + D +V
Sbjct: 61 VTVTKDDSVEWDHIKPAVLGAVMEHYQSGQPVINEG-----QQQASGHAEHTGEDGEIVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|85705721|ref|ZP_01036818.1| nifU domain protein [Roseovarius sp. 217]
gi|85669711|gb|EAQ24575.1| nifU domain protein [Roseovarius sp. 217]
Length = 187
Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats.
Identities = 102/190 (53%), Positives = 136/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F A+ AE SPLA RIF +PG++ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLDAGTADFPTAEGAEKSPLAERIFRVPGVSGVFFGNDF 60
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + +W+H++P +LG IMEH+ SG P++ G G G + DS +V
Sbjct: 61 VTVTKGEATEWDHIKPAILGAIMEHYQSGQPVMLGEGGG-----ASGHAEHSGEDSEIVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTITLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|254465238|ref|ZP_05078649.1| NifU domain protein [Rhodobacterales bacterium Y4I]
gi|206686146|gb|EDZ46628.1| NifU domain protein [Rhodobacterales bacterium Y4I]
Length = 188
Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats.
Identities = 99/190 (52%), Positives = 136/190 (71%), Gaps = 5/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A A SPLASRIF++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEAGTADFPSADAAGKSPLASRIFAVDGVTGVFFGNDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + DW+H++P +LG +MEH+ SG P++ +G G + D+ +V
Sbjct: 61 VTVTKAEGIDWDHIKPAILGAVMEHYQSGQPVMADGSAD----PASGHAEHSGEDAEIVN 116
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 117 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 176
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 177 IPEVTEVRPV 186
>gi|86138949|ref|ZP_01057520.1| nifU domain protein [Roseobacter sp. MED193]
gi|85824180|gb|EAQ44384.1| nifU domain protein [Roseobacter sp. MED193]
Length = 187
Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 101/190 (53%), Positives = 139/190 (73%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA+RIF++ G+A V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLDAGTADFPSAETAGSSPLATRIFAVSGVAGVFFGNDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+H++P +LG IMEH+ SG PI++ GG G + +S +V
Sbjct: 61 VTVTKSDSVEWDHIKPAILGAIMEHYQSGQPIVNAGG-----EQSSGHAEHSGENSEIVD 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK++LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKDLLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|83949998|ref|ZP_00958731.1| nifU domain protein [Roseovarius nubinhibens ISM]
gi|83837897|gb|EAP77193.1| nifU domain protein [Roseovarius nubinhibens ISM]
Length = 188
Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 101/190 (53%), Positives = 135/190 (71%), Gaps = 5/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA RIF I G+ V+FG+DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLDAGTADFPSAEAAGKSPLAERIFKIAGVTGVFFGHDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD+ +W+H++P +LG IMEHF SG P++ + G G + D +V
Sbjct: 61 VTVTKDEGTEWDHVKPAILGAIMEHFQSGKPVMLDAGGDPQS----GHAEHTGEDGEIVN 116
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 117 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTITLKMGIENLLRHY 176
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 177 IPEVTEVRPV 186
>gi|254780430|ref|YP_003064843.1| nitrogen fixation protein [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040107|gb|ACT56903.1| nitrogen fixation protein [Candidatus Liberibacter asiaticus str.
psy62]
Length = 189
Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats.
Identities = 189/189 (100%), Positives = 189/189 (100%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF
Sbjct: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR
Sbjct: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV
Sbjct: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
Query: 181 PEVKDIRTV 189
PEVKDIRTV
Sbjct: 181 PEVKDIRTV 189
>gi|126740480|ref|ZP_01756167.1| nifU domain protein [Roseobacter sp. SK209-2-6]
gi|126718281|gb|EBA14996.1| nifU domain protein [Roseobacter sp. SK209-2-6]
Length = 187
Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats.
Identities = 101/190 (53%), Positives = 137/190 (72%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F NA+ AE SPLA R+F+ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLETGTADFPNAEAAENSPLAQRVFAAAGVTGVFFGNDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + +W+H++P +LG IMEHF SG P+++ GG G + D+ VV
Sbjct: 61 VTVTKSEDVEWDHIKPAILGAIMEHFQSGQPVLNAGG-----AQSSGHAEHSGEDAEVVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK++LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKDLLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|260426420|ref|ZP_05780399.1| scaffold protein Nfu/NifU [Citreicella sp. SE45]
gi|260420912|gb|EEX14163.1| scaffold protein Nfu/NifU [Citreicella sp. SE45]
Length = 185
Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats.
Identities = 104/190 (54%), Positives = 134/190 (70%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F NA A+ SPLA R+FS+ G+ V+ G DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQAVLGAGTADFPNADGADASPLARRLFSVTGVTGVFLGSDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD DW+H++P VLG IMEHF SGDP++ G G F D +V
Sbjct: 61 VTVTKDDGADWDHVKPAVLGAIMEHFQSGDPVMAGEGGSS------GHAAFDGEDKEIVG 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDSRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVTEVRPV 184
>gi|148251664|ref|YP_001236249.1| putative nifU protein [Bradyrhizobium sp. BTAi1]
gi|146403837|gb|ABQ32343.1| putative nifU protein [Bradyrhizobium sp. BTAi1]
Length = 189
Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats.
Identities = 101/188 (53%), Positives = 143/188 (76%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+VVL G + FS+ + A SPLA R+F+I G+ V++G DF
Sbjct: 1 MFIQTEATPNPATLKFIPGRVVLPSGTMEFSSREAAARSPLAERLFAIGGVTGVFYGADF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
ITV K+ +W+HL+P +LG IMEH++SG P++ +G + D + E+D+ V
Sbjct: 61 ITVTKNDGEWQHLKPAILGAIMEHYMSGAPLLADGSAANDDATDEDDEFYDEADTETVGM 120
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IK+++++RVRPAVA DGGDI F+G++DGIV+L+M+GACSGCPS++ TL++G+ N+L HFV
Sbjct: 121 IKDLIESRVRPAVANDGGDITFRGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKHFV 180
Query: 181 PEVKDIRT 188
PEV ++R
Sbjct: 181 PEVVEVRP 188
>gi|259415063|ref|ZP_05738985.1| NifU domain protein [Silicibacter sp. TrichCH4B]
gi|259348973|gb|EEW60727.1| NifU domain protein [Silicibacter sp. TrichCH4B]
Length = 187
Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats.
Identities = 100/190 (52%), Positives = 135/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA RIF++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLDAGTADFPSAEAASKSPLAQRIFAVSGVTGVFFGNDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD +W+H++P VLG +MEH+ SG P+I G + G + D +V
Sbjct: 61 VTVTKDDSVEWDHIKPAVLGAVMEHYQSGQPVIDEG-----QQQASGHAEHTGEDGEIVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|146337209|ref|YP_001202257.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp.
ORS278]
gi|146190015|emb|CAL74007.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp.
ORS278]
Length = 189
Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats.
Identities = 100/188 (53%), Positives = 141/188 (75%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+VVL G + F++ A SPLA R+F++ G+ V++G DF
Sbjct: 1 MFIQTEATPNPATLKFIPGRVVLPAGTMEFASRDAAARSPLAERLFAVDGVTGVFYGADF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
ITV K +W+HL+P +LG IMEH++SG P++ +G + D F E+D+ V
Sbjct: 61 ITVTKSDGEWQHLKPAILGAIMEHYMSGAPLLADGSAANDASADEDDEFFDEADTETVGM 120
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IK+++++RVRPAVA DGGDI F+G++DGIV+L+M+GACSGCPS++ TL++G+ N+L HFV
Sbjct: 121 IKDLIESRVRPAVANDGGDITFRGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKHFV 180
Query: 181 PEVKDIRT 188
PEV ++R
Sbjct: 181 PEVVEVRP 188
>gi|260431494|ref|ZP_05785465.1| NifU domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260415322|gb|EEX08581.1| NifU domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 187
Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats.
Identities = 101/190 (53%), Positives = 135/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F A+ AE SPLA RIF++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEAGTADFPTAEAAENSPLAKRIFAVKGVTGVFFGNDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD W+H++P +LG +MEH+ SG PI+ +G G + DS +V
Sbjct: 61 VTVTKDDDVQWDHIKPAILGAVMEHYQSGQPIMGDGADA-----ASGHAEHTGEDSEIVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|254474955|ref|ZP_05088341.1| NifU domain protein [Ruegeria sp. R11]
gi|214029198|gb|EEB70033.1| NifU domain protein [Ruegeria sp. R11]
Length = 187
Score = 287 bits (734), Expect = 6e-76, Method: Composition-based stats.
Identities = 101/190 (53%), Positives = 135/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA RIF++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEMGTADFPSAEAAGSSPLAQRIFAVSGVTGVFFGNDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+H++P +LG +MEHF SG P+I GG G + D +V
Sbjct: 61 VTVTKADGVEWDHIKPAILGAVMEHFQSGQPVISEGG-----EQTSGHAEHTGEDGEIVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|239830990|ref|ZP_04679319.1| Scaffold protein Nfu/NifU [Ochrobactrum intermedium LMG 3301]
gi|239823257|gb|EEQ94825.1| Scaffold protein Nfu/NifU [Ochrobactrum intermedium LMG 3301]
Length = 211
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 103/190 (54%), Positives = 139/190 (73%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ EG F + A SPLA+++FS+PG+ V+FGYD
Sbjct: 22 MFIQTETTPNPATLKFLPGKVVMPEGTADFRDPSTAGNTSPLAAKLFSVPGVTGVFFGYD 81
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV KD +W+HL+P +LG IMEHF+SG P + D F E+D+ V+
Sbjct: 82 FITVTKDDGEWQHLKPAILGTIMEHFMSGAPAMAGNSNADAAAAHGDEEFFDEADAETVE 141
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ RVRPAVA+DGGDI F+G+ +G VFL+M+GACSGCPS++ TLK+G+ N+L HF
Sbjct: 142 IIKELIETRVRPAVAQDGGDITFRGFENGTVFLNMKGACSGCPSSTATLKHGIQNLLRHF 201
Query: 180 VPEVKDIRTV 189
VPEV+ + +
Sbjct: 202 VPEVQQVEQI 211
>gi|163738966|ref|ZP_02146379.1| nitrogen-fixing NifU-like protein [Phaeobacter gallaeciensis BS107]
gi|163741789|ref|ZP_02149179.1| nifU domain protein [Phaeobacter gallaeciensis 2.10]
gi|161384962|gb|EDQ09341.1| nifU domain protein [Phaeobacter gallaeciensis 2.10]
gi|161387771|gb|EDQ12127.1| nitrogen-fixing NifU-like protein [Phaeobacter gallaeciensis BS107]
Length = 187
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 101/190 (53%), Positives = 133/190 (70%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F A A SPLA RIF++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEMGTADFPTADAAGSSPLAQRIFAVSGVTGVFFGNDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+H++P +LG +MEHF SG P+I GG G + D +V
Sbjct: 61 VTVTKADTVEWDHIKPAILGAVMEHFQSGQPVISEGG-----EQTSGHAEHTGEDGEIVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|149202972|ref|ZP_01879943.1| nitrogen-fixing NifU-like protein [Roseovarius sp. TM1035]
gi|149143518|gb|EDM31554.1| nitrogen-fixing NifU-like protein [Roseovarius sp. TM1035]
Length = 187
Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 99/190 (52%), Positives = 136/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+++ SPLA RIF +PG++ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEAGTADFPSAEKSGSSPLAERIFRVPGVSGVFFGNDF 60
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + +W+H++P +LG IMEH+ SG P++ G + DSA+V
Sbjct: 61 VTVTKGEAIEWDHIKPAILGAIMEHYQSGQPVMLGESAV-----ASGHAEHTGEDSAIVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTITLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|83943871|ref|ZP_00956328.1| nifU domain protein [Sulfitobacter sp. EE-36]
gi|83953512|ref|ZP_00962234.1| nifU domain protein [Sulfitobacter sp. NAS-14.1]
gi|83842480|gb|EAP81648.1| nifU domain protein [Sulfitobacter sp. NAS-14.1]
gi|83845118|gb|EAP82998.1| nifU domain protein [Sulfitobacter sp. EE-36]
Length = 186
Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats.
Identities = 99/190 (52%), Positives = 134/190 (70%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F + A SPLA+R+F++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEMGTADFPAPEAASASPLATRLFAVEGVTGVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+T+ K D +W+HL+P +LG IMEHF SG P++ G G + D A+V
Sbjct: 61 VTITKADGIEWDHLKPALLGAIMEHFQSGQPVMETG-----HDHASGHAEHTGEDGAIVG 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|149913250|ref|ZP_01901784.1| NifU-like domain protein [Roseobacter sp. AzwK-3b]
gi|149813656|gb|EDM73482.1| NifU-like domain protein [Roseobacter sp. AzwK-3b]
Length = 187
Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats.
Identities = 98/190 (51%), Positives = 132/190 (69%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F A+ ++ SPLA+R+F + G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEAGTADFPTAEASDKSPLATRLFGVKGVRGVFFGNDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+H++P +LG IMEHF SG P++ G DS +V
Sbjct: 61 VTVTKTDDAEWDHIKPSILGAIMEHFQSGQPVMAVDA-----EHASGHAAHEGEDSEIVG 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTITLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|89068101|ref|ZP_01155518.1| Nitrogen-fixing NifU [Oceanicola granulosus HTCC2516]
gi|89046340|gb|EAR52397.1| Nitrogen-fixing NifU [Oceanicola granulosus HTCC2516]
Length = 186
Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 97/190 (51%), Positives = 133/190 (70%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL G F++ + A SPLA RIFS+ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGEAVLDAGTADFASPEAANTSPLARRIFSVQGVTGVFFGTDF 60
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD+ +W+H++P +LG IMEH+ SG P++ G + D +V
Sbjct: 61 VTVTKDEATEWDHVKPAILGAIMEHYQSGAPVVEGAEGA------TGHAEHTGEDGEIVA 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVVEVRPV 184
>gi|310815348|ref|YP_003963312.1| NifU domain protein [Ketogulonicigenium vulgare Y25]
gi|308754083|gb|ADO42012.1| NifU domain protein [Ketogulonicigenium vulgare Y25]
Length = 185
Score = 283 bits (726), Expect = 5e-75, Method: Composition-based stats.
Identities = 101/190 (53%), Positives = 134/190 (70%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA R+F++ G+ V+ GYDF
Sbjct: 1 MFIQTESTPNPATLKFLPGQQVLELGTADFPSAEAATTSPLAKRLFAVDGVTGVFLGYDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K D +W HL+P VLG IMEHF SG P++ + + D D A+V+
Sbjct: 61 ITVTKTDNLEWPHLKPAVLGAIMEHFQSGQPVMEGEAVSAHRAHD-------GEDGAIVE 113
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+G+C+GCPS++ TLK G+ N+L H+
Sbjct: 114 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGSCAGCPSSTLTLKMGIENLLRHY 173
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 174 IPEVLEVRPV 183
>gi|301758232|ref|XP_002914967.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Ailuropoda melanoleuca]
Length = 420
Score = 283 bits (726), Expect = 6e-75, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 225 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 284
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ E D VV
Sbjct: 285 ITVTKESEELDWNLLKPDIYATIMDFFASGLPLVTEETSSGEAG--------SEEDDEVV 336
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 337 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 396
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 397 YIPEVEGVEQV 407
>gi|126725029|ref|ZP_01740872.1| nifU domain protein [Rhodobacterales bacterium HTCC2150]
gi|126706193|gb|EBA05283.1| nifU domain protein [Rhodobacterales bacterium HTCC2150]
Length = 187
Score = 283 bits (726), Expect = 6e-75, Method: Composition-based stats.
Identities = 102/190 (53%), Positives = 134/190 (70%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A+ SPLA+RIF I GIA V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLETGTADFPSAETADQSPLATRIFGIQGIAGVFFGNDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + +W+H++P +LG IMEHF SG P++ + E D +V
Sbjct: 61 VTVTKAENSEWDHIKPAILGAIMEHFQSGQPVLSGENTAPAHAEAAN-----EEDKEIVG 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVVEVRPV 185
>gi|84683414|ref|ZP_01011317.1| nifU domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84668157|gb|EAQ14624.1| nifU domain protein [Rhodobacterales bacterium HTCC2654]
Length = 186
Score = 283 bits (725), Expect = 7e-75, Method: Composition-based stats.
Identities = 97/190 (51%), Positives = 134/190 (70%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA R+F++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQEVLEAGTADFPSAEAAAKSPLAQRVFAVNGVKGVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+H++P +LG IMEHF SG P++ G + + D+ +V
Sbjct: 61 VTVTKADDVEWDHVKPAILGAIMEHFQSGAPVMGEGPR------EAAHAEHDGPDAEIVV 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK++LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKDLLDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLKHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVTEVRPV 184
>gi|325087305|gb|ADY77002.1| iron-sulfur cluster assembly protein NFU4 [Ipomoea batatas]
gi|325087311|gb|ADY77005.1| iron-sulfur cluster assembly protein NFU4 [Ipomoea batatas]
Length = 281
Score = 283 bits (725), Expect = 7e-75, Method: Composition-based stats.
Identities = 89/191 (46%), Positives = 117/191 (61%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F PG+ V+ G+ F NA+ A SPLA +F I GI V++G DF
Sbjct: 80 MFIQTQSTPNPLSLMFYPGKPVMETGSADFPNARSAMNSPLAKALFGIDGITRVFYGSDF 139
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D W+ L+P + IM+ F SG P+ + E DS V
Sbjct: 140 VTVTKSDDASWDLLKPEIFAAIMDFFSSGKPLFLDSNTA-----ASMDTAIQEDDSETVA 194
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 195 MIKELLETRIRPAVQDDGGDIEYRGFDADSGIVKLRMQGACSGCPSSSVTLKSGIENMLM 254
Query: 178 HFVPEVKDIRT 188
H+VPEVK +
Sbjct: 255 HYVPEVKGVEQ 265
>gi|260574570|ref|ZP_05842574.1| Scaffold protein Nfu/NifU [Rhodobacter sp. SW2]
gi|259023466|gb|EEW26758.1| Scaffold protein Nfu/NifU [Rhodobacter sp. SW2]
Length = 186
Score = 283 bits (725), Expect = 8e-75, Method: Composition-based stats.
Identities = 104/190 (54%), Positives = 136/190 (71%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA RIF+ G+ASV+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLELGTADFPSAEAAGKSPLAQRIFAAGGVASVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D W+H++P +LG IMEHF SG P+I G D DS +V+
Sbjct: 61 VTVTKTDTAAWDHIKPGILGAIMEHFQSGAPVIEGEQAAS------GHADHDGPDSDIVR 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R+V
Sbjct: 175 IPEVLEVRSV 184
>gi|110636361|ref|YP_676569.1| nitrogen-fixing NifU-like [Mesorhizobium sp. BNC1]
gi|110287345|gb|ABG65404.1| nitrogen-fixing NifU-like protein [Chelativorans sp. BNC1]
Length = 189
Score = 283 bits (725), Expect = 8e-75, Method: Composition-based stats.
Identities = 106/190 (55%), Positives = 142/190 (74%), Gaps = 3/190 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VVL EG F +A A+ SPLA+R+F +PG+ V+FG+D
Sbjct: 1 MFIQTEATPNPATLKFLPGRVVLEEGTADFRSADSAQAVSPLAARLFEVPGVTGVFFGFD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV KD DW+HL+P +LG IMEHF+SG P++ + + S + E+D +V
Sbjct: 61 FITVTKDGADWQHLKPAILGTIMEHFMSGQPVM--AANDGSERETASSEFYDEADEEIVT 118
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA+DGGDI F+GY +G VFL M+GAC+GCPS++ TLK+G+ N+L+HF
Sbjct: 119 TIKELLETRVRPAVAQDGGDITFRGYENGTVFLHMKGACAGCPSSTATLKHGIQNLLHHF 178
Query: 180 VPEVKDIRTV 189
VPEV+ + V
Sbjct: 179 VPEVQQVEQV 188
>gi|114764450|ref|ZP_01443675.1| nifU domain protein [Pelagibaca bermudensis HTCC2601]
gi|114543017|gb|EAU46036.1| nifU domain protein [Roseovarius sp. HTCC2601]
Length = 186
Score = 283 bits (724), Expect = 9e-75, Method: Composition-based stats.
Identities = 100/190 (52%), Positives = 133/190 (70%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ + SPLA R+F + G+ V+ G DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLGAGTADFPSAEGTDASPLAKRLFGVTGVTGVFLGSDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D DW+H++P VLG IMEHF SG+P++ G G F D +V
Sbjct: 61 VTVTKADGADWDHVKPAVLGAIMEHFQSGEPVMAGEGGAS------GHAAFEGEDEEIVG 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDSRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVTEVRPV 184
>gi|254487441|ref|ZP_05100646.1| NifU domain protein [Roseobacter sp. GAI101]
gi|214044310|gb|EEB84948.1| NifU domain protein [Roseobacter sp. GAI101]
Length = 203
Score = 283 bits (724), Expect = 9e-75, Method: Composition-based stats.
Identities = 99/190 (52%), Positives = 133/190 (70%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F + A SPLA+R+F++ G+ V+FG DF
Sbjct: 18 MFIQTESTPNPATLKFLPGQTVLEMGTADFPAPEAASSSPLATRLFAVDGVTGVFFGTDF 77
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+HL+P +LG IMEHF SG ++ G G + D A+V
Sbjct: 78 VTVTKADTIEWDHLKPALLGAIMEHFQSGQSVMEQG-----HEHASGHAEHTGEDGAIVG 132
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 133 QIKELLDSRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 192
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 193 IPEVTEVRPV 202
>gi|110678955|ref|YP_681962.1| NifU-like domain-containing protein [Roseobacter denitrificans OCh
114]
gi|109455071|gb|ABG31276.1| NifU-like domain protein [Roseobacter denitrificans OCh 114]
Length = 187
Score = 283 bits (724), Expect = 9e-75, Method: Composition-based stats.
Identities = 99/190 (52%), Positives = 133/190 (70%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A+ SPLA R+F++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEMGTADFPSAETADKSPLAERVFAVEGVTGVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D DW+H++P +LG IMEHF SG P++ G + D +V
Sbjct: 61 VTVTKADNVDWDHIKPALLGAIMEHFQSGQPVMAGD-----HTPTSGHAEHTGDDGVIVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|260462744|ref|ZP_05810949.1| Scaffold protein Nfu/NifU [Mesorhizobium opportunistum WSM2075]
gi|259031388|gb|EEW32659.1| Scaffold protein Nfu/NifU [Mesorhizobium opportunistum WSM2075]
Length = 189
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 106/190 (55%), Positives = 137/190 (72%), Gaps = 3/190 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+ VL+EG F +A A SPLA R+F IPG+ V+FGYD
Sbjct: 1 MFIQTESTPNPATLKFLPGKEVLLEGTADFRDADSAAVASPLAGRLFEIPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV KD DW+HL+P +LG IMEHF+SG P++ G + ++D +V
Sbjct: 61 FITVTKDGPDWQHLKPAILGAIMEHFMSGAPVMAKAGPAAETSQTGE--FYDKADEELVI 118
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+LD RVRPAVA+DGGDI F+G+ +G VFL M+GAC+GCPS++ TLK+G+ N+L HF
Sbjct: 119 TIKELLDTRVRPAVAQDGGDITFRGFENGTVFLHMKGACAGCPSSTATLKHGIQNLLRHF 178
Query: 180 VPEVKDIRTV 189
VPEV+ + V
Sbjct: 179 VPEVQQVEQV 188
>gi|84500284|ref|ZP_00998550.1| nifU domain protein [Oceanicola batsensis HTCC2597]
gi|84392218|gb|EAQ04486.1| nifU domain protein [Oceanicola batsensis HTCC2597]
Length = 187
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 98/190 (51%), Positives = 134/190 (70%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ + SPLA+R+F++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEAGTADFPSAETSGKSPLAARLFAVEGVTGVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D+ W+H++P +LG IMEH+ SG P++ G G D D +V
Sbjct: 61 VTVTKADETQWDHIKPALLGAIMEHYQSGQPVMATG-----DQPTSGHADHEGEDQEIVV 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLYMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|13474434|ref|NP_106002.1| hypothetical protein mll5315 [Mesorhizobium loti MAFF303099]
gi|14025187|dbj|BAB51788.1| mll5315 [Mesorhizobium loti MAFF303099]
Length = 189
Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats.
Identities = 106/190 (55%), Positives = 137/190 (72%), Gaps = 3/190 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+ VL+EG F +A A SPLA R+F IPG+ V+FGYD
Sbjct: 1 MFIQTESTPNPATLKFLPGKEVLLEGTADFRDADSAATASPLAGRLFEIPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV KD DW+HL+P +LG IMEHF+SG P++ G + ++D +V
Sbjct: 61 FITVTKDGPDWQHLKPAILGAIMEHFMSGAPVMAKSGPAAETSQTGE--FYDKADEELVI 118
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+LD RVRPAVA+DGGDI F+G+ +G VFL M+GAC+GCPS++ TLK+G+ N+L HF
Sbjct: 119 TIKELLDTRVRPAVAQDGGDITFRGFENGTVFLHMKGACAGCPSSTATLKHGIQNLLRHF 178
Query: 180 VPEVKDIRTV 189
VPEV+ + V
Sbjct: 179 VPEVQQVEQV 188
>gi|163734126|ref|ZP_02141567.1| NifU-like domain protein [Roseobacter litoralis Och 149]
gi|161392662|gb|EDQ16990.1| NifU-like domain protein [Roseobacter litoralis Och 149]
Length = 187
Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats.
Identities = 101/190 (53%), Positives = 133/190 (70%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A+ SPLA RIF+I G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEMGTADFPSAETADKSPLAERIFAIEGVTGVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D DW+H++P +LG IMEHF SG P++ G + D +V
Sbjct: 61 VTVTKADSVDWDHIKPGLLGAIMEHFQSGQPVMAGD-----HTPTSGHAEHTGEDGVIVN 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|153007498|ref|YP_001368713.1| scaffold protein Nfu/NifU [Ochrobactrum anthropi ATCC 49188]
gi|151559386|gb|ABS12884.1| Scaffold protein Nfu/NifU [Ochrobactrum anthropi ATCC 49188]
Length = 190
Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats.
Identities = 103/190 (54%), Positives = 140/190 (73%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ EG F +A A SPLA+++FS+PG+ V+FGYD
Sbjct: 1 MFIQTETTPNPATLKFLPGKVVMPEGTADFRDASTAGNTSPLAAKLFSVPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K+ +W+HL+P +LG IMEHF+SG P + D F E+D+ V+
Sbjct: 61 FITVTKEDGEWQHLKPAILGTIMEHFMSGAPAMAGNSNADAAAAHGEEEFFDEADAETVE 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ RVRPAVA+DGGDI F+G+ +G VFL+M+GACSGCPS++ TLK+G+ N+L HF
Sbjct: 121 IIKELIETRVRPAVAQDGGDITFRGFENGTVFLNMKGACSGCPSSTATLKHGIQNLLRHF 180
Query: 180 VPEVKDIRTV 189
VPEV+ + +
Sbjct: 181 VPEVQQVEQI 190
>gi|242086973|ref|XP_002439319.1| hypothetical protein SORBIDRAFT_09g004310 [Sorghum bicolor]
gi|241944604|gb|EES17749.1| hypothetical protein SORBIDRAFT_09g004310 [Sorghum bicolor]
Length = 268
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 122/191 (63%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F PG+ V+ G+ F NA+ A SPLA +F+I G+ ++FG DF
Sbjct: 71 MFIQTQSTPNPQSLMFYPGKPVMEVGSSDFPNARTAMTSPLAKALFAIDGVTRIFFGSDF 130
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K ++ W++L+P V IM+ + SG P+ + E DS +V
Sbjct: 131 VTVTKSEETSWDYLKPEVFAAIMDFYSSGQPLFLDSNAA-----ASMDTAIHEDDSEIVA 185
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ +GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 186 MIKELLETRIRPAVQDDGGDIEYRGFDPENGIVKLKMQGACSGCPSSSVTLKSGIENMLM 245
Query: 178 HFVPEVKDIRT 188
H+VPEVK +
Sbjct: 246 HYVPEVKGVEQ 256
>gi|319779939|ref|YP_004139415.1| Scaffold protein Nfu/NifU [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317165827|gb|ADV09365.1| Scaffold protein Nfu/NifU [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 189
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 107/190 (56%), Positives = 137/190 (72%), Gaps = 3/190 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+ VLVEG F +A A SPLA R+F IPG+ V+FGYD
Sbjct: 1 MFIQTESTPNPATLKFLPGKEVLVEGTADFRDADSAAVASPLAGRLFEIPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV KD DW+HL+P +LG IMEHF+SG P++ G + ++D +V
Sbjct: 61 FITVTKDGPDWQHLKPAILGAIMEHFMSGAPVMAKAGPAAETSQTGE--FYDKADEELVI 118
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+LD RVRPAVA+DGGDI F+G+ +G VFL M+GAC+GCPS++ TLK+G+ N+L HF
Sbjct: 119 TIKELLDTRVRPAVAQDGGDITFRGFENGTVFLHMKGACAGCPSSTATLKHGIQNLLRHF 178
Query: 180 VPEVKDIRTV 189
VPEV+ + V
Sbjct: 179 VPEVQQVEQV 188
>gi|222084688|ref|YP_002543217.1| nitrogen fixation protein [Agrobacterium radiobacter K84]
gi|221722136|gb|ACM25292.1| nitrogen fixation protein [Agrobacterium radiobacter K84]
Length = 188
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 108/189 (57%), Positives = 146/189 (77%), Gaps = 1/189 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VV+ G F +A EAE+SPLA+R+F IPG++ VYFGYDF
Sbjct: 1 MFIQTEATPNPATLKFLPGKVVMESGTAEFRSADEAEVSPLAARLFDIPGVSGVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
I+V KD +W+HL+P +LG IMEHF+SG P++ + D G F E D+ +V
Sbjct: 61 ISVSKDDQEWQHLKPAILGSIMEHFMSGKPVMGAASVLSEAQDASGE-FFDEGDATIVLT 119
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+L+ RVRPAVA+DGGDI F+G+RDG V+L+M+G+C+GCPS++ TLK+G+ N+L HFV
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFRDGKVYLNMKGSCAGCPSSTATLKHGIQNLLRHFV 179
Query: 181 PEVKDIRTV 189
PEV+++ V
Sbjct: 180 PEVQEVEAV 188
>gi|326497811|dbj|BAJ94768.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521670|dbj|BAK00411.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats.
Identities = 89/191 (46%), Positives = 121/191 (63%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F PG+ V+ G+ F NA+ A SPLA +F+I G+ V+FG DF
Sbjct: 68 MFIQTQSTPNPQSLMFHPGKPVMDVGSSDFPNARTAMTSPLAKALFAIEGVTRVFFGSDF 127
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D+ W++L+P V IM+ + SG P+ + E DS +V
Sbjct: 128 VTVTKSDETSWDYLKPEVFAAIMDFYSSGQPLFLDSNTA-----AAMDTAIHEDDSEIVA 182
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 183 MIKELLETRIRPAVQDDGGDIEYRGFEPETGIVKLKMQGACSGCPSSSVTLKSGIENMLM 242
Query: 178 HFVPEVKDIRT 188
H+VPEVK +
Sbjct: 243 HYVPEVKGVEQ 253
>gi|56695297|ref|YP_165645.1| NifU domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56677034|gb|AAV93700.1| nifU domain protein [Ruegeria pomeroyi DSS-3]
Length = 187
Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats.
Identities = 98/190 (51%), Positives = 136/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ AE SPLA+RIF++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEVGTADFPSAEAAEKSPLAARIFAVSGVTGVFFGNDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + +W+H++P +LG +MEH+ SG P++ G G + D+ VV
Sbjct: 61 VTVTKAEGVEWDHIKPAILGAVMEHYQSGQPVM-----GADAQTGSGHAEHSGEDAEVVT 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK +LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKALLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|163744246|ref|ZP_02151606.1| NifU-like domain protein [Oceanibulbus indolifex HEL-45]
gi|161381064|gb|EDQ05473.1| NifU-like domain protein [Oceanibulbus indolifex HEL-45]
Length = 186
Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats.
Identities = 96/190 (50%), Positives = 128/190 (67%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F SPLA R+F++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEMGTADFPTPDAGATSPLAQRLFAVEGVTGVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+H++P +LG IMEHF SGD ++ G D +V
Sbjct: 61 VTVTKQDAVEWDHVKPALLGAIMEHFQSGDAVM-----ASDHQPTSGHAAHDGEDGEIVG 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVTEVRPV 185
>gi|332557651|ref|ZP_08411973.1| Nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides WS8N]
gi|332275363|gb|EGJ20678.1| Nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides WS8N]
Length = 186
Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats.
Identities = 98/190 (51%), Positives = 133/190 (70%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ+VL G F+ + A SPLA RIF++ G+++V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQMVLEAGTADFATPEAAATSPLARRIFAVGGVSAVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+ V K D+ W+H++P +LG IMEH+ SG P++ G D VV+
Sbjct: 61 VAVTKADEVAWDHIKPAILGAIMEHYQSGAPVLEGEQAAS------GHASHDGPDEDVVR 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVLEVRPV 184
>gi|255264504|ref|ZP_05343846.1| NifU domain protein [Thalassiobium sp. R2A62]
gi|255106839|gb|EET49513.1| NifU domain protein [Thalassiobium sp. R2A62]
Length = 187
Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats.
Identities = 98/190 (51%), Positives = 133/190 (70%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ AE SPLA RIF++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLDMGTADFPSAEAAEKSPLAKRIFAVEGVTGVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+H++P +LG +MEH+ SG +I G + D+ +V
Sbjct: 61 VTVTKGDDIEWDHIKPAILGAVMEHYQSGAAVIDGEAPTSG-----GHAEHTGEDAEIVG 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFLGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVLEVRPV 185
>gi|159045379|ref|YP_001534173.1| hypothetical protein Dshi_2839 [Dinoroseobacter shibae DFL 12]
gi|157913139|gb|ABV94572.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 187
Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats.
Identities = 100/190 (52%), Positives = 134/190 (70%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA RIF++ G+ +V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLETGTADFPSAEAAGSSPLAGRIFAVNGVTAVFFGTDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD+ +W+H++P VLG +MEH+ SGD ++ G DS +V
Sbjct: 61 VTVTKDEGVEWDHIKPAVLGAVMEHYQSGDAVMTGEASA-----PAGHAAHDGPDSEIVG 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVLEVRPV 185
>gi|254461257|ref|ZP_05074673.1| NifU domain protein [Rhodobacterales bacterium HTCC2083]
gi|206677846|gb|EDZ42333.1| NifU domain protein [Rhodobacteraceae bacterium HTCC2083]
Length = 188
Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats.
Identities = 102/190 (53%), Positives = 138/190 (72%), Gaps = 5/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A A++SPLA+RIF++ G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEMGTADFPSAVGADVSPLAARIFAVEGVTGVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+H++P +LG IMEHF SG ++ GDM + G + D +V
Sbjct: 61 VTVTKADAVEWDHIKPALLGAIMEHFQSGAAVMA----GDMAPPNSGHAEHTGEDGEIVV 116
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD+RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 117 QIKELLDSRVRPAVAQDGGDITFHGFERGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 176
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 177 IPEVTEVRPV 186
>gi|254510570|ref|ZP_05122637.1| NifU domain protein [Rhodobacteraceae bacterium KLH11]
gi|221534281|gb|EEE37269.1| NifU domain protein [Rhodobacteraceae bacterium KLH11]
Length = 187
Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats.
Identities = 99/190 (52%), Positives = 135/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ AE SPLA+RIF + G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEAGTADFPSAEAAEKSPLATRIFGVAGVTGVFFGNDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D W+H++P +LG +MEH+ SG P++ G G + D+ +V
Sbjct: 61 VTVTKSDDMQWDHIKPAILGAVMEHYQSGQPVM-----GTDADTGAGHAEHSGEDAEIVD 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK++LD+RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKDLLDSRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTITLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVVEVRPV 185
>gi|119383283|ref|YP_914339.1| NifU domain-containing protein [Paracoccus denitrificans PD1222]
gi|119373050|gb|ABL68643.1| nitrogen-fixing NifU domain protein [Paracoccus denitrificans
PD1222]
Length = 184
Score = 280 bits (718), Expect = 5e-74, Method: Composition-based stats.
Identities = 98/190 (51%), Positives = 127/190 (66%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL G F A SPLA RIF++PG+ V+ G DF
Sbjct: 1 MFIQTETTPNPATLKFLPGETVLGSGTADFPAPDTAAASPLARRIFAVPGVTGVFLGSDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + W+HL+P VLG IMEH+ SG P I D D+ +V
Sbjct: 61 VTVTKAEDAVWDHLKPSVLGAIMEHYQSGAPAIEGATASGHNDQDGP-------DAEIVN 113
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 114 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 173
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 174 IPEVTEVRPV 183
>gi|49476032|ref|YP_034073.1| hypothetical protein BH13490 [Bartonella henselae str. Houston-1]
gi|49238840|emb|CAF28122.1| hypothetical protein BH13490 [Bartonella henselae str. Houston-1]
Length = 192
Score = 280 bits (717), Expect = 6e-74, Method: Composition-based stats.
Identities = 102/189 (53%), Positives = 143/189 (75%), Gaps = 1/189 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG VVL EG + F +++EA + SPLA+++F+IP + V+FGYD
Sbjct: 1 MFIQTETTPNPATLKFLPGCVVLSEGVLEFRDSEEAAKNSPLAAKLFNIPNVNGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K + +W+HL+P +LG IMEHF+SGDP+I+ + + + E D+ +V
Sbjct: 61 FITVSKKEGEWQHLKPAILGTIMEHFLSGDPVINTNATRQAQTHALNEEFYNEKDADIVL 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ R+RPAVA DGGDI F+G+ +GIV+L+MRGAC+GCPS++ TLK+G+ N+L HF
Sbjct: 121 TIKELLETRIRPAVANDGGDITFRGFENGIVYLNMRGACAGCPSSTATLKHGIENLLRHF 180
Query: 180 VPEVKDIRT 188
+PEV +
Sbjct: 181 IPEVVGVEA 189
>gi|325291785|ref|YP_004277649.1| scaffold protein Nfu/NifU [Agrobacterium sp. H13-3]
gi|325059638|gb|ADY63329.1| putative scaffold protein Nfu/NifU [Agrobacterium sp. H13-3]
Length = 187
Score = 280 bits (717), Expect = 7e-74, Method: Composition-based stats.
Identities = 111/189 (58%), Positives = 141/189 (74%), Gaps = 2/189 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL G F N +A+ SPLA R+F+IPG+ VYFG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGKVVLESGTAEFLNPAQAQASPLAERLFTIPGVTGVYFGFDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
ITV KD +W+HL+P +LG IMEHF+SG PI+ + + D F D +V
Sbjct: 61 ITVTKDDAEWQHLKPAILGSIMEHFMSGRPIMGTAIAAE--VSDEEGEFFEAGDETIVAT 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+LD RVRPAVA+DGGDI F+G+RDG VFL+M+GACSGCPS++ TLK+GV N+L HFV
Sbjct: 119 IKELLDTRVRPAVAQDGGDITFRGFRDGTVFLNMKGACSGCPSSTATLKHGVQNLLRHFV 178
Query: 181 PEVKDIRTV 189
PEV+++ V
Sbjct: 179 PEVREVEAV 187
>gi|225464130|ref|XP_002264979.1| PREDICTED: similar to NFU4 (NFU domain protein 4) [Vitis vinifera]
Length = 271
Score = 280 bits (717), Expect = 7e-74, Method: Composition-based stats.
Identities = 88/191 (46%), Positives = 118/191 (61%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNPA+L F PG+ V+ G+ F N++ A SPLA ++ I GI V+FG DF
Sbjct: 70 MFIQTQSTPNPASLMFYPGKPVMEVGSADFPNSRSAMSSPLAKSLYGIDGITRVFFGSDF 129
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K D W+ ++P + IM+ + SG P+ + E DS V
Sbjct: 130 ITVTKSDDASWDFIKPEIFAAIMDFYSSGKPLFLDSNTA-----AAMDTAIHEDDSETVA 184
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 185 MIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSSSVTLKSGIENMLM 244
Query: 178 HFVPEVKDIRT 188
H+VPEVK +
Sbjct: 245 HYVPEVKGVEQ 255
>gi|299133388|ref|ZP_07026583.1| Scaffold protein Nfu/NifU [Afipia sp. 1NLS2]
gi|298593525|gb|EFI53725.1| Scaffold protein Nfu/NifU [Afipia sp. 1NLS2]
Length = 187
Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats.
Identities = 101/188 (53%), Positives = 138/188 (73%), Gaps = 2/188 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL G + F++ A SPLA ++F IPG+ V++G DF
Sbjct: 1 MFIQTETTPNPATLKFLPGRTVLDSGTMEFTSRDSAARSPLAVKLFEIPGVTGVFYGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV KD DW+HL+P +LG IMEH++SG PI+ +G D F E+D+ V
Sbjct: 61 VTVTKDDGDWQHLKPAILGTIMEHYMSGGPILADGAQPDAGPH--AEEFFNEADAETVGI 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IK++L+ RVRPAVA DGGDI F+G++DGIVFL M+G+CSGCPS++ TLK+G+ N+L H+V
Sbjct: 119 IKDILETRVRPAVASDGGDITFRGFKDGIVFLDMKGSCSGCPSSTATLKHGIQNLLKHYV 178
Query: 181 PEVKDIRT 188
P+V ++R
Sbjct: 179 PDVVEVRP 186
>gi|126461658|ref|YP_001042772.1| NifU domain-containing protein [Rhodobacter sphaeroides ATCC 17029]
gi|221638629|ref|YP_002524891.1| nitrogen-fixing NifU domain-containing protein [Rhodobacter
sphaeroides KD131]
gi|126103322|gb|ABN76000.1| nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides ATCC
17029]
gi|221159410|gb|ACM00390.1| Nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides KD131]
Length = 186
Score = 280 bits (716), Expect = 8e-74, Method: Composition-based stats.
Identities = 98/190 (51%), Positives = 132/190 (69%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ+VL G F+ + A SPLA RIF+ G+++V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQMVLEAGTADFATPEAAATSPLARRIFAAGGVSAVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+ V K D+ W+H++P +LG IMEH+ SG P++ G D VV+
Sbjct: 61 VAVTKADEVAWDHIKPAILGAIMEHYQSGAPVLEGEQAAS------GHASHDGPDEDVVR 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVLEVRPV 184
>gi|84515908|ref|ZP_01003269.1| nifU domain protein [Loktanella vestfoldensis SKA53]
gi|84510350|gb|EAQ06806.1| nifU domain protein [Loktanella vestfoldensis SKA53]
Length = 187
Score = 280 bits (716), Expect = 9e-74, Method: Composition-based stats.
Identities = 99/190 (52%), Positives = 132/190 (69%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F NA+ A+ SPLA RIF+ G++ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQNVLEVGTADFPNAEAAQHSPLAQRIFAAGGVSGVFFGIDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+H++P +LG IMEH+ SG ++ G + D +V
Sbjct: 61 VTVTKADGAEWDHIKPGILGAIMEHYQSGQSVM-----AADHKPVSGHAEHSGEDGDIVT 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVIEVRPV 185
>gi|238231487|ref|NP_001154157.1| HIRA-interacting protein 5 [Oncorhynchus mykiss]
gi|225704456|gb|ACO08074.1| HIRA-interacting protein 5 [Oncorhynchus mykiss]
Length = 250
Score = 280 bits (716), Expect = 9e-74, Method: Composition-based stats.
Identities = 82/191 (42%), Positives = 122/191 (63%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKF+PG++VL +G + F+ +EA SPLA ++F I G+ V+ G DF
Sbjct: 56 MFIQTQDTPNPNSLKFLPGRMVLEQGTMDFTAPREAYCSPLARQLFRIDGVKGVFLGPDF 115
Query: 61 ITVGKDQYD--WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K D W+ ++P V IM+ F SG P+++ + + D V+
Sbjct: 116 ITITKTDVDLEWKLIKPDVFAAIMDFFTSGLPVVNE------EDTPRADTAPSDDDDEVI 169
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++ G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 170 AMIKELLDTRIRPTVQEDGGDVLYCGFEDGIVKLKLQGSCTSCPSSMVTLKSGIQNMLQF 229
Query: 179 FVPEVKDIRTV 189
+VPEV+ + V
Sbjct: 230 YVPEVEGVEQV 240
>gi|222147346|ref|YP_002548303.1| hypothetical protein Avi_0430 [Agrobacterium vitis S4]
gi|221734336|gb|ACM35299.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 186
Score = 279 bits (715), Expect = 9e-74, Method: Composition-based stats.
Identities = 107/189 (56%), Positives = 143/189 (75%), Gaps = 3/189 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VV+ G F + + A SPLA ++F+IPG+ SV+FGYDF
Sbjct: 1 MFIQTESTPNPATLKFLPGKVVMDNGTAEFRDREAAMASPLAEKLFAIPGVTSVFFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV KD +W HL+P +LG IMEHF+SG PI+ + GD D+ F E D +V
Sbjct: 61 VTVTKDTAEWPHLKPAILGSIMEHFMSGAPIMGSAVAGDEASDE---EFFNEGDETIVAT 117
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+L+ RVRPAVA+DGGDI F+G+RDG VFL+M+G+C+GCPS++ TLK+GV N+L HF+
Sbjct: 118 IKELLETRVRPAVAQDGGDITFRGFRDGKVFLNMKGSCAGCPSSTATLKHGVQNLLRHFI 177
Query: 181 PEVKDIRTV 189
PEV+++ V
Sbjct: 178 PEVQEVEAV 186
>gi|316931562|ref|YP_004106544.1| Scaffold protein Nfu/NifU [Rhodopseudomonas palustris DX-1]
gi|315599276|gb|ADU41811.1| Scaffold protein Nfu/NifU [Rhodopseudomonas palustris DX-1]
Length = 188
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 100/188 (53%), Positives = 141/188 (75%), Gaps = 2/188 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+ VL G + F++A +A SPLA+R+F I G++ V++G DF
Sbjct: 1 MFIQTEPTPNPATLKFIPGRSVLDSGTLEFTDAAQAARSPLAARLFDIDGVSGVFYGADF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV KD+ +W+HL+P +LG IMEH++SG PI+ D + E D+ V+
Sbjct: 61 VTVTKDRGEWQHLKPAILGAIMEHYMSGAPIL--ADGKSDGDDGDDDEFYAEGDAETVEI 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IK++++ RVRPAVA DGGDI F+G++DGIV+L+MRGAC+GCPS++ TL++G+ N+L HFV
Sbjct: 119 IKDLIETRVRPAVANDGGDITFRGFKDGIVYLNMRGACAGCPSSTATLQHGIQNLLKHFV 178
Query: 181 PEVKDIRT 188
PEV ++R
Sbjct: 179 PEVVEVRP 186
>gi|156548302|ref|XP_001602506.1| PREDICTED: similar to protein phosphatase 2a [Nasonia vitripennis]
Length = 511
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 88/192 (45%), Positives = 118/192 (61%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKFIPG VL +G F +A +A SPLA +F I G+ SV+FG D
Sbjct: 67 MFIQTQDTPNPNSLKFIPGVEVLGKGQTKDFPSATDAFCSPLAKMLFRIEGVKSVFFGSD 126
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FIT+ K + +W+ ++P + IM+ F SG PI E D +
Sbjct: 127 FITITKIDEDVEWKLIKPEIFATIMDFFASGLPIFTEAQSSS-------DTVINEDDDEI 179
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
VQ IKE+LD R+RP V DGGDIVF G+ +GIV L M+G+C+ CPS+ TLK GV N++
Sbjct: 180 VQMIKELLDTRIRPTVQEDGGDIVFMGFENGIVKLKMQGSCTSCPSSVVTLKNGVQNMMQ 239
Query: 178 HFVPEVKDIRTV 189
++PEV + V
Sbjct: 240 FYIPEVLGVEQV 251
>gi|254453730|ref|ZP_05067167.1| NifU domain protein [Octadecabacter antarcticus 238]
gi|198268136|gb|EDY92406.1| NifU domain protein [Octadecabacter antarcticus 238]
Length = 186
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 97/190 (51%), Positives = 131/190 (68%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F + + A SPLA RIF + G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQNVLEVGTADFPSVEAAGKSPLAGRIFGVEGVTGVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K D +W+H++P +LG +MEH+ SG ++ G G + D+ +V
Sbjct: 61 ITVTKADDVEWDHIKPAILGAVMEHYQSGAAVMTGEQAGS------GHAEHTGEDADIVN 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVVEVRPV 184
>gi|170016007|ref|NP_001116180.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial [Danio
rerio]
gi|169158109|emb|CAQ14737.1| HIRA interacting protein 5 [Danio rerio]
Length = 243
Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKF+PG+ VL G + F+ ++A SPLA ++F I G+ SV+FG DF
Sbjct: 51 MFIQTQDTPNPNSLKFLPGRAVLDSGTMDFAGPRDAFCSPLARQLFRIDGVKSVFFGPDF 110
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K + +W+ ++P V IM+ F SG P+I+ E D VV
Sbjct: 111 ITITKTSGETEWKVIKPDVFATIMDFFTSGLPVINEADAPR------ADTAPSEDDDEVV 164
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++ G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 165 AMIKELLDTRIRPTVQEDGGDVLYHGFEDGIVKLKLQGSCTSCPSSIITLKNGIQNMLQF 224
Query: 179 FVPEVKDIRTV 189
+VPEV+ + V
Sbjct: 225 YVPEVEGVEQV 235
>gi|37681825|gb|AAQ97790.1| HIRA interacting protein 5 [Danio rerio]
gi|62205090|gb|AAH92670.1| HIRA interacting protein 5 [Danio rerio]
gi|182891738|gb|AAI65097.1| Hirip5 protein [Danio rerio]
Length = 243
Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKF+PG+ VL G + F+ ++A SPLA ++F I G+ SV+FG DF
Sbjct: 51 MFIQTQDTPNPNSLKFLPGRAVLDSGTMDFAGPRDAFCSPLARQLFRIDGVKSVFFGPDF 110
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K + +W+ ++P V IM+ F SG P+++ E D VV
Sbjct: 111 ITITKTSGETEWKVIKPDVFATIMDFFTSGLPVVNEADAPR------ADTAPSEDDDEVV 164
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++ G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 165 AMIKELLDTRIRPTVQEDGGDVLYHGFEDGIVKLKLQGSCTSCPSSIITLKNGIQNMLQF 224
Query: 179 FVPEVKDIRTV 189
+VPEV+ + V
Sbjct: 225 YVPEVEGVEQV 235
>gi|114769272|ref|ZP_01446898.1| nifU domain protein [alpha proteobacterium HTCC2255]
gi|114550189|gb|EAU53070.1| nifU domain protein [alpha proteobacterium HTCC2255]
Length = 186
Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 96/190 (50%), Positives = 133/190 (70%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ V+ G F + + SPLA RIF++ G +V+ G DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVMNMGTADFPSPQAGSSSPLAKRIFAVDGATAVFLGPDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+T+ K + DW+H++P +LG IMEHF SG P+I + + + G + DS +V
Sbjct: 61 VTITKTEDADWDHIKPALLGAIMEHFQSGQPVI------EGEDNSGGHAEHTGEDSDIVN 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK++LD RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKDLLDTRVRPAVAQDGGDITFHGFERGIVYLHMQGACAGCPSSTITLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVTEVRPV 184
>gi|225626680|ref|ZP_03784719.1| NifU-related protein [Brucella ceti str. Cudo]
gi|254707168|ref|ZP_05168996.1| NifU-related protein [Brucella pinnipedialis M163/99/10]
gi|254709289|ref|ZP_05171100.1| NifU-related protein [Brucella pinnipedialis B2/94]
gi|254713288|ref|ZP_05175099.1| NifU-related protein [Brucella ceti M644/93/1]
gi|254716359|ref|ZP_05178170.1| NifU-related protein [Brucella ceti M13/05/1]
gi|256030812|ref|ZP_05444426.1| NifU-related protein [Brucella pinnipedialis M292/94/1]
gi|256158837|ref|ZP_05456694.1| NifU-related protein [Brucella ceti M490/95/1]
gi|256254218|ref|ZP_05459754.1| NifU-related protein [Brucella ceti B1/94]
gi|260169716|ref|ZP_05756527.1| NifU-related protein [Brucella sp. F5/99]
gi|261218142|ref|ZP_05932423.1| scaffold protein Nfu/NifU [Brucella ceti M13/05/1]
gi|261221368|ref|ZP_05935649.1| scaffold protein Nfu/NifU [Brucella ceti B1/94]
gi|261314644|ref|ZP_05953841.1| scaffold protein Nfu/NifU [Brucella pinnipedialis M163/99/10]
gi|261316798|ref|ZP_05955995.1| scaffold protein Nfu/NifU [Brucella pinnipedialis B2/94]
gi|261321011|ref|ZP_05960208.1| scaffold protein Nfu/NifU [Brucella ceti M644/93/1]
gi|261759255|ref|ZP_06002964.1| nitrogen-fixing NifU [Brucella sp. F5/99]
gi|265987868|ref|ZP_06100425.1| scaffold protein Nfu/NifU [Brucella pinnipedialis M292/94/1]
gi|265997328|ref|ZP_06109885.1| scaffold protein Nfu/NifU [Brucella ceti M490/95/1]
gi|225618337|gb|EEH15380.1| NifU-related protein [Brucella ceti str. Cudo]
gi|260919952|gb|EEX86605.1| scaffold protein Nfu/NifU [Brucella ceti B1/94]
gi|260923231|gb|EEX89799.1| scaffold protein Nfu/NifU [Brucella ceti M13/05/1]
gi|261293701|gb|EEX97197.1| scaffold protein Nfu/NifU [Brucella ceti M644/93/1]
gi|261296021|gb|EEX99517.1| scaffold protein Nfu/NifU [Brucella pinnipedialis B2/94]
gi|261303670|gb|EEY07167.1| scaffold protein Nfu/NifU [Brucella pinnipedialis M163/99/10]
gi|261739239|gb|EEY27235.1| nitrogen-fixing NifU [Brucella sp. F5/99]
gi|262551796|gb|EEZ07786.1| scaffold protein Nfu/NifU [Brucella ceti M490/95/1]
gi|264660065|gb|EEZ30326.1| scaffold protein Nfu/NifU [Brucella pinnipedialis M292/94/1]
Length = 190
Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats.
Identities = 102/190 (53%), Positives = 140/190 (73%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ EG F + AE SPLA+++F++PG+ V+FGYD
Sbjct: 1 MFIQTETTPNPATLKFLPGKVVMPEGTADFRDPASAENTSPLAAKLFAVPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K+ +W+HL+P +LG IMEHF+SG P + D F E+D+ +V+
Sbjct: 61 FITVTKEDGEWQHLKPAILGTIMEHFMSGAPAMAGNANADAAAAHSEEEFFDEADTEIVE 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ RVRPAVA+DGGDI F+G+ +G VFL M+GACSGCPS++ TLK+G+ N+L HF
Sbjct: 121 TIKELIETRVRPAVAQDGGDITFRGFENGTVFLHMKGACSGCPSSTATLKHGIQNLLRHF 180
Query: 180 VPEVKDIRTV 189
VPEV+ + +
Sbjct: 181 VPEVQQVEQI 190
>gi|23501052|ref|NP_697179.1| NifU-like protein [Brucella suis 1330]
gi|62289118|ref|YP_220911.1| NifU-like protein [Brucella abortus bv. 1 str. 9-941]
gi|82699057|ref|YP_413631.1| nitrogen-fixing NifU, C-terminal [Brucella melitensis biovar
Abortus 2308]
gi|148560296|ref|YP_001258173.1| NifU-like protein [Brucella ovis ATCC 25840]
gi|161618129|ref|YP_001592016.1| HIRA-interacting protein 5 [Brucella canis ATCC 23365]
gi|189023393|ref|YP_001934161.1| Nitrogen-fixing NifU, C-terminal [Brucella abortus S19]
gi|225851675|ref|YP_002731908.1| NifU-related protein [Brucella melitensis ATCC 23457]
gi|237814609|ref|ZP_04593607.1| NifU-related protein [Brucella abortus str. 2308 A]
gi|254690444|ref|ZP_05153698.1| NifU-related protein [Brucella abortus bv. 6 str. 870]
gi|254694934|ref|ZP_05156762.1| NifU-related protein [Brucella abortus bv. 3 str. Tulya]
gi|254696564|ref|ZP_05158392.1| NifU-related protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254700949|ref|ZP_05162777.1| NifU-related protein [Brucella suis bv. 5 str. 513]
gi|254705318|ref|ZP_05167146.1| NifU-related protein [Brucella suis bv. 3 str. 686]
gi|254718357|ref|ZP_05180168.1| NifU-related protein [Brucella sp. 83/13]
gi|254731477|ref|ZP_05190055.1| NifU-related protein [Brucella abortus bv. 4 str. 292]
gi|256060282|ref|ZP_05450455.1| NifU-related protein [Brucella neotomae 5K33]
gi|256112644|ref|ZP_05453565.1| NifU-related protein [Brucella melitensis bv. 3 str. Ether]
gi|256258700|ref|ZP_05464236.1| NifU-related protein [Brucella abortus bv. 9 str. C68]
gi|256264815|ref|ZP_05467347.1| nitrogen-fixing NifU [Brucella melitensis bv. 2 str. 63/9]
gi|256368604|ref|YP_003106110.1| NifU-related protein [Brucella microti CCM 4915]
gi|260546415|ref|ZP_05822155.1| nitrogen-fixing NifU [Brucella abortus NCTC 8038]
gi|260567221|ref|ZP_05837691.1| nitrogen-fixing NifU [Brucella suis bv. 4 str. 40]
gi|260755996|ref|ZP_05868344.1| scaffold protein Nfu/NifU [Brucella abortus bv. 6 str. 870]
gi|260759220|ref|ZP_05871568.1| scaffold protein Nfu/NifU [Brucella abortus bv. 4 str. 292]
gi|260760942|ref|ZP_05873285.1| scaffold protein Nfu/NifU [Brucella abortus bv. 2 str. 86/8/59]
gi|260885016|ref|ZP_05896630.1| scaffold protein Nfu/NifU [Brucella abortus bv. 9 str. C68]
gi|261215272|ref|ZP_05929553.1| scaffold protein Nfu/NifU [Brucella abortus bv. 3 str. Tulya]
gi|261324254|ref|ZP_05963451.1| scaffold protein Nfu/NifU [Brucella neotomae 5K33]
gi|261751468|ref|ZP_05995177.1| scaffold protein Nfu/NifU [Brucella suis bv. 5 str. 513]
gi|261756030|ref|ZP_05999739.1| scaffold protein Nfu/NifU [Brucella suis bv. 3 str. 686]
gi|265983318|ref|ZP_06096053.1| scaffold protein Nfu/NifU [Brucella sp. 83/13]
gi|265994085|ref|ZP_06106642.1| scaffold protein Nfu/NifU [Brucella melitensis bv. 3 str. Ether]
gi|297247534|ref|ZP_06931252.1| thioredoxin-like protein [Brucella abortus bv. 5 str. B3196]
gi|306839588|ref|ZP_07472392.1| NifU-related protein [Brucella sp. NF 2653]
gi|306842572|ref|ZP_07475223.1| NifU-related protein [Brucella sp. BO2]
gi|306844409|ref|ZP_07476999.1| NifU-related protein [Brucella sp. BO1]
gi|23346918|gb|AAN29094.1| NifU-related protein [Brucella suis 1330]
gi|62195250|gb|AAX73550.1| NifU-related protein [Brucella abortus bv. 1 str. 9-941]
gi|82615158|emb|CAJ10095.1| Nitrogen-fixing NifU, C-terminal [Brucella melitensis biovar
Abortus 2308]
gi|148371553|gb|ABQ61532.1| NifU-related protein [Brucella ovis ATCC 25840]
gi|161334940|gb|ABX61245.1| HIRA-interacting protein 5 [Brucella canis ATCC 23365]
gi|189018965|gb|ACD71687.1| Nitrogen-fixing NifU, C-terminal [Brucella abortus S19]
gi|225640040|gb|ACN99953.1| NifU-related protein [Brucella melitensis ATCC 23457]
gi|237789446|gb|EEP63656.1| NifU-related protein [Brucella abortus str. 2308 A]
gi|255998762|gb|ACU47161.1| NifU-related protein [Brucella microti CCM 4915]
gi|260096522|gb|EEW80398.1| nitrogen-fixing NifU [Brucella abortus NCTC 8038]
gi|260156739|gb|EEW91819.1| nitrogen-fixing NifU [Brucella suis bv. 4 str. 40]
gi|260669538|gb|EEX56478.1| scaffold protein Nfu/NifU [Brucella abortus bv. 4 str. 292]
gi|260671374|gb|EEX58195.1| scaffold protein Nfu/NifU [Brucella abortus bv. 2 str. 86/8/59]
gi|260676104|gb|EEX62925.1| scaffold protein Nfu/NifU [Brucella abortus bv. 6 str. 870]
gi|260874544|gb|EEX81613.1| scaffold protein Nfu/NifU [Brucella abortus bv. 9 str. C68]
gi|260916879|gb|EEX83740.1| scaffold protein Nfu/NifU [Brucella abortus bv. 3 str. Tulya]
gi|261300234|gb|EEY03731.1| scaffold protein Nfu/NifU [Brucella neotomae 5K33]
gi|261741221|gb|EEY29147.1| scaffold protein Nfu/NifU [Brucella suis bv. 5 str. 513]
gi|261745783|gb|EEY33709.1| scaffold protein Nfu/NifU [Brucella suis bv. 3 str. 686]
gi|262765066|gb|EEZ10987.1| scaffold protein Nfu/NifU [Brucella melitensis bv. 3 str. Ether]
gi|263095225|gb|EEZ18894.1| nitrogen-fixing NifU [Brucella melitensis bv. 2 str. 63/9]
gi|264661910|gb|EEZ32171.1| scaffold protein Nfu/NifU [Brucella sp. 83/13]
gi|297174703|gb|EFH34050.1| thioredoxin-like protein [Brucella abortus bv. 5 str. B3196]
gi|306275222|gb|EFM56972.1| NifU-related protein [Brucella sp. BO1]
gi|306287428|gb|EFM58908.1| NifU-related protein [Brucella sp. BO2]
gi|306405286|gb|EFM61561.1| NifU-related protein [Brucella sp. NF 2653]
gi|326408161|gb|ADZ65226.1| Nitrogen-fixing NifU, C-terminal protein [Brucella melitensis M28]
gi|326537871|gb|ADZ86086.1| NifU-related protein [Brucella melitensis M5-90]
Length = 190
Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats.
Identities = 102/190 (53%), Positives = 140/190 (73%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ EG F + AE SPLA+++F++PG+ V+FGYD
Sbjct: 1 MFIQTETTPNPATLKFLPGKVVMPEGTADFRDPASAENTSPLAAKLFAVPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K+ +W+HL+P +LG IMEHF+SG P + D F E+D+ +V+
Sbjct: 61 FITVTKEDGEWQHLKPAILGTIMEHFMSGAPAMAGNANADAAAAHGEEEFFDEADTEIVE 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ RVRPAVA+DGGDI F+G+ +G VFL M+GACSGCPS++ TLK+G+ N+L HF
Sbjct: 121 TIKELIETRVRPAVAQDGGDITFRGFENGTVFLHMKGACSGCPSSTATLKHGIQNLLRHF 180
Query: 180 VPEVKDIRTV 189
VPEV+ + +
Sbjct: 181 VPEVQQVEQI 190
>gi|90421987|ref|YP_530357.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris BisB18]
gi|90104001|gb|ABD86038.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris BisB18]
Length = 188
Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats.
Identities = 101/189 (53%), Positives = 141/189 (74%), Gaps = 1/189 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+VVL G + F++ A SPLA RIF +PG+ V++G DF
Sbjct: 1 MFIQTEPTPNPATLKFIPGRVVLDSGTMEFNDRATAARSPLAERIFEVPGVTGVFYGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV KD DW+HL+P +LG IMEH++SG+P++ +G + D F ++D+ V
Sbjct: 61 VTVTKDDSDWQHLKPSILGAIMEHYMSGEPLMADGRV-DGDEPSEDDEFFDKADAETVDM 119
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IK++++ RVRPAVA DGGDI F+G++DGIV+L M+GACSGCPS++ TL++G+ N+L HFV
Sbjct: 120 IKDLIETRVRPAVANDGGDITFRGFKDGIVYLKMQGACSGCPSSTATLQHGIQNLLKHFV 179
Query: 181 PEVKDIRTV 189
P V ++R +
Sbjct: 180 PAVVEVRPI 188
>gi|126734863|ref|ZP_01750609.1| NifU-like domain protein [Roseobacter sp. CCS2]
gi|126715418|gb|EBA12283.1| NifU-like domain protein [Roseobacter sp. CCS2]
Length = 187
Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats.
Identities = 99/190 (52%), Positives = 131/190 (68%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ AE SPLA RIF G+ V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQNVLEVGTADFPSAEAAENSPLAKRIFDAGGVTGVFFGIDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+H++P +LG IMEH+ SG ++ + G + D +V
Sbjct: 61 VTVTKADDVEWDHIKPGILGAIMEHYQSGQSVM-----AEDHKPVSGHAEHTGEDGEIVG 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFERGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVVEVRPV 185
>gi|163868796|ref|YP_001610020.1| NifU-related protein [Bartonella tribocorum CIP 105476]
gi|161018467|emb|CAK02025.1| NifU-related protein [Bartonella tribocorum CIP 105476]
Length = 192
Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats.
Identities = 99/189 (52%), Positives = 139/189 (73%), Gaps = 1/189 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VVL EG + F + +EA + SPLA+++F+IP + V+ GYD
Sbjct: 1 MFIQTETTPNPATLKFLPGRVVLSEGVLEFRDREEAAKNSPLAAKLFNIPNVNGVFLGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K + +W+HL+P +LG IMEHF+S +P+I + + E D+ +V
Sbjct: 61 FITVSKKEGEWQHLKPVILGTIMEHFLSNEPVITTNATTQAHAHALNEEFYDEKDADIVL 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ R+RPAVA DGGDI F+G+ +GIV+L+MRGAC+GCPS++ TLK+G+ N+L HF
Sbjct: 121 TIKELLETRIRPAVANDGGDITFRGFENGIVYLNMRGACAGCPSSTATLKHGIENLLRHF 180
Query: 180 VPEVKDIRT 188
+PEV +
Sbjct: 181 IPEVLGVEA 189
>gi|115522240|ref|YP_779151.1| NifU domain-containing protein [Rhodopseudomonas palustris BisA53]
gi|115516187|gb|ABJ04171.1| nitrogen-fixing NifU domain protein [Rhodopseudomonas palustris
BisA53]
Length = 188
Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats.
Identities = 101/189 (53%), Positives = 143/189 (75%), Gaps = 1/189 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL G + FS+ A SPLA R+F +PG+ V++G DF
Sbjct: 1 MFIQTEPTPNPATLKFLPGRAVLDSGTMEFSDRAAAARSPLAERLFEVPGVTGVFYGLDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
++V KD DW+HL+P +LG IMEHF+SG+P++ +G + D + F ++D+ V
Sbjct: 61 VSVTKDDGDWQHLKPAILGAIMEHFMSGEPLMADGRV-DGEDASEDDEFFEKADTETVVI 119
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IK++++ RVRPAVA DGGDI+F+G++DGIV+L MRGACSGCPS++ TL++G+ N+L HFV
Sbjct: 120 IKDLIETRVRPAVANDGGDIIFRGFKDGIVYLHMRGACSGCPSSTATLQHGIQNLLKHFV 179
Query: 181 PEVKDIRTV 189
PEV ++R +
Sbjct: 180 PEVVEVRPI 188
>gi|209484091|gb|ACI47520.1| iron-sulfer cluster scaffold protein NFU4 [Eucalyptus grandis]
Length = 243
Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 116/191 (60%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F PG+ V+ G+ F NA+ + S LA +F I G+ V++G DF
Sbjct: 40 MFIQTQSTPNPMSLMFYPGKPVMEVGSADFPNARTSMNSALARALFGIDGVTRVFYGSDF 99
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D W+ L+P + IM+ + SG P+ + E DS V
Sbjct: 100 VTVTKSDDASWDLLKPEIFAAIMDFYSSGQPLFLDSQTASA-----MDTAIHEDDSETVA 154
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 155 MIKELLETRIRPAVQDDGGDIEYRGFDLDTGIVKLRMQGACSGCPSSSVTLKSGIENMLM 214
Query: 178 HFVPEVKDIRT 188
H+VPEVK +
Sbjct: 215 HYVPEVKAVEQ 225
>gi|218461569|ref|ZP_03501660.1| Scaffold protein Nfu/NifU [Rhizobium etli Kim 5]
Length = 188
Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats.
Identities = 106/188 (56%), Positives = 145/188 (77%), Gaps = 1/188 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPAT KF+PG+VV+ G F +A+EA+ SPLA+R+F IPG+ VYFGYDF
Sbjct: 1 MFIQTEATPNPATQKFLPGKVVMENGTAEFRSAEEAQASPLAARLFEIPGVTGVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
I+V KD +W+HL+P +LG IMEHF+SG P++ + + + D G F E D ++V
Sbjct: 61 ISVSKDDAEWQHLKPAILGSIMEHFMSGKPVMGDASILS-EDADAGDEFFDEGDESIVLT 119
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+L+ RVRPAVA+DGGDI F+G++DG V+L+M+G+CSGCPS++ TLK+GV N+L HFV
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDGKVYLNMKGSCSGCPSSTATLKHGVQNLLRHFV 179
Query: 181 PEVKDIRT 188
PEV+++
Sbjct: 180 PEVQEVIA 187
>gi|163842411|ref|YP_001626815.1| HIRA-interacting protein 5 [Brucella suis ATCC 23445]
gi|163673134|gb|ABY37245.1| HIRA-interacting protein 5 [Brucella suis ATCC 23445]
Length = 190
Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats.
Identities = 102/190 (53%), Positives = 140/190 (73%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ EG F + AE SPLA+++F++PG+ V+FGYD
Sbjct: 1 MFIQTETTPNPATLKFLPGKVVMPEGTADFRDPPSAENTSPLAAKLFAVPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K+ +W+HL+P +LG IMEHF+SG P + D F E+D+ +V+
Sbjct: 61 FITVTKEHGEWQHLKPAILGTIMEHFMSGAPAMAGNANADAAAAHGEEEFFDEADTEIVE 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ RVRPAVA+DGGDI F+G+ +G VFL M+GACSGCPS++ TLK+G+ N+L HF
Sbjct: 121 TIKELIETRVRPAVAQDGGDITFRGFENGTVFLHMKGACSGCPSSTATLKHGIQNLLRHF 180
Query: 180 VPEVKDIRTV 189
VPEV+ + +
Sbjct: 181 VPEVQQVEQI 190
>gi|225717260|gb|ACO14476.1| NFU1 iron-sulfur cluster scaffold homolog [Esox lucius]
Length = 253
Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats.
Identities = 81/191 (42%), Positives = 120/191 (62%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKF+PG +VL G + F+ +EA PLA ++F I G+ V+ G DF
Sbjct: 59 MFIQTQDTPNPNSLKFLPGCMVLERGTMDFAAPREAYCCPLARQLFGIDGVKGVFLGPDF 118
Query: 61 ITVGKDQYD--WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K D W+ ++P V IM+ F SG P+++ + + D V+
Sbjct: 119 ITITKANVDLEWKLIKPDVFAAIMDFFASGLPVMNE------EDTPRADTAPSDDDDEVI 172
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 173 TMIKELLDTRIRPTVQEDGGDVLYRGFEDGIVKLKLQGSCTSCPSSIVTLKSGIQNMLQF 232
Query: 179 FVPEVKDIRTV 189
+VPEV+ + V
Sbjct: 233 YVPEVEGVEQV 243
>gi|17988091|ref|NP_540725.1| NifU protein [Brucella melitensis bv. 1 str. 16M]
gi|256045931|ref|ZP_05448803.1| NifU protein [Brucella melitensis bv. 1 str. Rev.1]
gi|260563213|ref|ZP_05833699.1| nitrogen-fixing NifU [Brucella melitensis bv. 1 str. 16M]
gi|265992342|ref|ZP_06104899.1| scaffold protein Nfu/NifU [Brucella melitensis bv. 1 str. Rev.1]
gi|17983843|gb|AAL52989.1| nifu protein [Brucella melitensis bv. 1 str. 16M]
gi|260153229|gb|EEW88321.1| nitrogen-fixing NifU [Brucella melitensis bv. 1 str. 16M]
gi|263003408|gb|EEZ15701.1| scaffold protein Nfu/NifU [Brucella melitensis bv. 1 str. Rev.1]
Length = 190
Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats.
Identities = 103/190 (54%), Positives = 140/190 (73%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ EG F + AE SPLA+++F++PG+ V+FGYD
Sbjct: 1 MFIQTETTPNPATLKFLPGKVVMPEGTADFRDPASAENTSPLAAKLFAVPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K+ +W+HL+P +LG IMEHF+SG P + D F E+D+ +V+
Sbjct: 61 FITVTKEDGEWQHLKPAILGTIMEHFMSGAPAMAGNANADAAAAHGEEEFFDEADTEIVE 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ RVRPAVA+DGGDI F+G+ +G VFL M+GACSGCPS++ TLK+GV N+L HF
Sbjct: 121 TIKELIETRVRPAVAQDGGDITFRGFENGTVFLHMKGACSGCPSSTATLKHGVQNLLRHF 180
Query: 180 VPEVKDIRTV 189
VPEV+ + +
Sbjct: 181 VPEVQQVEQI 190
>gi|125550903|gb|EAY96612.1| hypothetical protein OsI_18522 [Oryza sativa Indica Group]
Length = 272
Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 120/191 (62%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F PG+ V+ G+ F NA+ A SPLA +F+I G+ V+FG DF
Sbjct: 72 MFIQTQSTPNPQSLMFYPGKPVMEVGSSDFPNARTAMTSPLAKALFAIDGVTRVFFGSDF 131
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K ++ W++L+P V IM+ + SG + + E DS +V
Sbjct: 132 VTVTKSEETSWDYLKPEVFAAIMDFYSSGQSLFLDSSTA-----ASMDTAIHEDDSEIVA 186
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 187 MIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSSSVTLKSGIENMLM 246
Query: 178 HFVPEVKDIRT 188
H+VPEVK +
Sbjct: 247 HYVPEVKGVEQ 257
>gi|294851540|ref|ZP_06792213.1| thioredoxin-like protein [Brucella sp. NVSL 07-0026]
gi|294820129|gb|EFG37128.1| thioredoxin-like protein [Brucella sp. NVSL 07-0026]
Length = 190
Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats.
Identities = 102/190 (53%), Positives = 139/190 (73%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ EG F + AE SPLA+++F +PG+ V+FGYD
Sbjct: 1 MFIQTETTPNPATLKFLPGKVVMPEGTADFRDPASAENTSPLAAKLFVVPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K+ +W+HL+P +LG IMEHF+SG P + D F E+D+ +V+
Sbjct: 61 FITVTKEDGEWQHLKPAILGTIMEHFMSGAPAMAGNANADAAAAHGEEEFFDEADTEIVE 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ RVRPAVA+DGGDI F+G+ +G VFL M+GACSGCPS++ TLK+G+ N+L HF
Sbjct: 121 TIKELIETRVRPAVAQDGGDITFRGFENGTVFLHMKGACSGCPSSTATLKHGIQNLLRHF 180
Query: 180 VPEVKDIRTV 189
VPEV+ + +
Sbjct: 181 VPEVQQVEQI 190
>gi|158426327|ref|YP_001527619.1| nitrogen-fixing protein [Azorhizobium caulinodans ORS 571]
gi|158333216|dbj|BAF90701.1| nitrogen-fixing protein [Azorhizobium caulinodans ORS 571]
Length = 186
Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats.
Identities = 99/189 (52%), Positives = 136/189 (71%), Gaps = 3/189 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL +G + + EA SPL R+F + G+ V+ G DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRTVLGDGTLEARSPAEAGRSPLVQRLFEVKGVGGVFLGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV K DW H++P +LG IMEHF+SG P++ +G D + G F E+D +V
Sbjct: 61 VTVTKTDGDWAHMKPAILGAIMEHFMSGAPVLADGVAAD---QEDGEEFFNEADEEIVGT 117
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+++ RVRPAVA DGGDI F+G+R+G+V+L+M+G+CSGCPS++ TLK G+ N+L HFV
Sbjct: 118 IKELIETRVRPAVAADGGDITFRGFREGVVYLNMKGSCSGCPSSTATLKNGIENLLRHFV 177
Query: 181 PEVKDIRTV 189
PEV ++R V
Sbjct: 178 PEVNEVRPV 186
>gi|89053356|ref|YP_508807.1| nitrogen-fixing NifU-like [Jannaschia sp. CCS1]
gi|88862905|gb|ABD53782.1| nitrogen-fixing NifU-like protein [Jannaschia sp. CCS1]
Length = 187
Score = 277 bits (708), Expect = 8e-73, Method: Composition-based stats.
Identities = 102/190 (53%), Positives = 135/190 (71%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F A+ +E SPLASRIF++ G+ V+FG DF
Sbjct: 1 MFIQTEATPNPATLKFLPGQSVLEVGTADFPTAETSEKSPLASRIFAVEGVTGVFFGIDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D DW+H++P +LG IMEH+ SGDP++ GD G + D +V
Sbjct: 61 VTVTKADAVDWDHVKPAILGAIMEHYQSGDPVM-----GDGHEVSSGHAEHTGEDGEIVG 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK +LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKSLLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVVEVRPV 185
>gi|115462181|ref|NP_001054690.1| Os05g0155300 [Oryza sativa Japonica Group]
gi|54291852|gb|AAV32220.1| unknown protein [Oryza sativa Japonica Group]
gi|113578241|dbj|BAF16604.1| Os05g0155300 [Oryza sativa Japonica Group]
gi|215697325|dbj|BAG91319.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630253|gb|EEE62385.1| hypothetical protein OsJ_17174 [Oryza sativa Japonica Group]
Length = 272
Score = 276 bits (707), Expect = 9e-73, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 121/191 (63%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F PG+ V+ G+ F NA+ A SPLA +F+I G+ V+FG DF
Sbjct: 72 MFIQTQSTPNPQSLMFYPGKPVMEVGSSDFPNARTAMTSPLAKALFAIDGVTRVFFGSDF 131
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K ++ W++L+P V +IM+ + SG + + E DS +V
Sbjct: 132 VTVTKSEETSWDYLKPEVFAVIMDFYSSGQSLFLDSSTA-----ASMDTAIHEDDSEIVA 186
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 187 MIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSSSVTLKSGIENMLM 246
Query: 178 HFVPEVKDIRT 188
H+VPEVK +
Sbjct: 247 HYVPEVKGVEQ 257
>gi|190890051|ref|YP_001976593.1| nitrogen fixation protein [Rhizobium etli CIAT 652]
gi|218509253|ref|ZP_03507131.1| nitrogen fixation protein [Rhizobium etli Brasil 5]
gi|190695330|gb|ACE89415.1| nitrogen fixation protein [Rhizobium etli CIAT 652]
Length = 188
Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats.
Identities = 107/188 (56%), Positives = 144/188 (76%), Gaps = 1/188 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPAT KF+PG+VV+ G F +A EAE SPLA+R+F IPG+ VYFGYDF
Sbjct: 1 MFIQTEATPNPATQKFLPGKVVMENGTAEFRSAAEAEASPLAARLFEIPGVTGVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
I+V KD +W+HL+P +LG IMEHF+SG P++ + + + D G F E D ++V
Sbjct: 61 ISVSKDNAEWQHLKPAILGSIMEHFMSGKPVMGDASILS-EDADAGDEFFDEGDESIVLT 119
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+L+ RVRPAVA+DGGDI F+G++DG V+L+M+G+CSGCPS++ TLK+GV N+L HFV
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDGKVYLNMKGSCSGCPSSTATLKHGVQNLLRHFV 179
Query: 181 PEVKDIRT 188
PEV+++
Sbjct: 180 PEVQEVIA 187
>gi|224110188|ref|XP_002315442.1| predicted protein [Populus trichocarpa]
gi|222864482|gb|EEF01613.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats.
Identities = 91/191 (47%), Positives = 121/191 (63%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP++L F PG+ V+ G+ F NA+ A SPLA I+ I GI V+FG DF
Sbjct: 78 MFIQTQSTPNPSSLMFYPGKPVMDVGSADFPNARSAMNSPLAKAIYGIDGINRVFFGPDF 137
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
IT+ K D WE L+P + IM+ + SG+P+ + K E DS V
Sbjct: 138 ITITKSDDATWEFLKPEIFAAIMDFYSSGEPLFLDSQTAAAK-----DTAISEDDSETVA 192
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ + GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 193 MIKELLETRIRPAVQDDGGDIEYQGFDEETGIVKLKMQGACSGCPSSSVTLKSGIENMLM 252
Query: 178 HFVPEVKDIRT 188
H+VPEVK +
Sbjct: 253 HYVPEVKGVEQ 263
>gi|148666782|gb|EDK99198.1| mCG130855, isoform CRA_b [Mus musculus]
Length = 256
Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 119/191 (62%), Gaps = 7/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 57 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 116
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ G E D VV
Sbjct: 117 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETP-----PPPGEAGSSEEDDEVV 171
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 172 AMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQF 231
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 232 YIPEVEGVEQV 242
>gi|239047306|ref|NP_001131382.2| hypothetical protein LOC100192708 [Zea mays]
gi|238908578|gb|ACF79773.2| unknown [Zea mays]
Length = 268
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 118/191 (61%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F PG+ V+ G+ F NA+ A SPLA F+I G+ V+FG DF
Sbjct: 71 MFIQTQSTPNPQSLMFYPGKPVMEIGSSDFPNARTAMTSPLAKSPFAIDGVTRVFFGSDF 130
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K ++ W+ L+P V IM+ + SG P+ + E DS +V
Sbjct: 131 VTVTKSEETSWDCLKPEVFAAIMDFYSSGQPLFLDSNAA-----ASMDTAIHEDDSEIVA 185
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ G V L M+GACSGCPS+S TLK G+ N+L
Sbjct: 186 MIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLKMQGACSGCPSSSVTLKSGIENMLM 245
Query: 178 HFVPEVKDIRT 188
H+VPEVK +
Sbjct: 246 HYVPEVKGVEQ 256
>gi|218678782|ref|ZP_03526679.1| nitrogen fixation protein [Rhizobium etli CIAT 894]
Length = 188
Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 106/188 (56%), Positives = 145/188 (77%), Gaps = 1/188 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPAT KF+PG+VV+ G F +A+EAE SPLA+R+F IPG+ VYFGYDF
Sbjct: 1 MFIQTEATPNPATQKFLPGKVVMENGTAEFRSAEEAEASPLAARLFEIPGVTGVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
I+V KD +W+HL+P +LG IMEHF+SG P++ + + + D G F E D ++V
Sbjct: 61 ISVSKDNAEWQHLKPAILGSIMEHFMSGKPVMGDASILS-EDADAGDEFFDEGDESIVLT 119
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+L+ RVRPAVA+DGGDI F+G++DG V+L+M+G+C+GCPS++ TLK+GV N+L HFV
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDGKVYLNMKGSCAGCPSSTATLKHGVQNLLRHFV 179
Query: 181 PEVKDIRT 188
PEV+++
Sbjct: 180 PEVQEVIA 187
>gi|86356038|ref|YP_467930.1| nitrogen fixation protein [Rhizobium etli CFN 42]
gi|86280140|gb|ABC89203.1| nitrogen fixation protein [Rhizobium etli CFN 42]
Length = 188
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 107/188 (56%), Positives = 145/188 (77%), Gaps = 1/188 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPAT KF+PG+VV+ G F +A+EAE SPLA+R+F IPG+ VYFGYDF
Sbjct: 1 MFIQTEATPNPATQKFLPGKVVMENGTAEFRSAEEAEASPLAARLFDIPGVTGVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
I+V KD +W+HL+P +LG IMEHF+SG P++ + + +D G F E D ++V
Sbjct: 61 ISVSKDNAEWQHLKPAILGSIMEHFMSGKPVMGDASILSEDVDA-GDEFFDEGDESIVLT 119
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+L+ RVRPAVA+DGGDI F+G++DG V+L+M+G+CSGCPS++ TLK+GV N+L HFV
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDGKVYLNMKGSCSGCPSSTATLKHGVQNLLRHFV 179
Query: 181 PEVKDIRT 188
PEV+++
Sbjct: 180 PEVQEVIA 187
>gi|300024980|ref|YP_003757591.1| Scaffold protein Nfu/NifU [Hyphomicrobium denitrificans ATCC 51888]
gi|299526801|gb|ADJ25270.1| Scaffold protein Nfu/NifU [Hyphomicrobium denitrificans ATCC 51888]
Length = 184
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 102/189 (53%), Positives = 131/189 (69%), Gaps = 5/189 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+ VL G F EA SPLA+R+F+I G+ V+ G DF
Sbjct: 1 MFIQTEATPNPATLKFIPGRDVLAGGTADFRTRNEAVASPLATRLFAIDGVDGVFLGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
I+V K +W+HL+P VLG IMEH++SG P+ + +D G+ + D A V
Sbjct: 61 ISVTKGNVEWQHLKPMVLGAIMEHYMSGAPV-----SDEEDSNDEGAESYDPEDEATVTT 115
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+L+ RVRPAVA+DGGDI F G+RDG+V+L MRGACSGCPS++ TL+ G+ N+L HF
Sbjct: 116 IKELLETRVRPAVAQDGGDITFSGFRDGVVYLHMRGACSGCPSSTATLRNGIENLLKHFC 175
Query: 181 PEVKDIRTV 189
PEV + V
Sbjct: 176 PEVTSVEAV 184
>gi|114577887|ref|XP_001137189.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
Length = 248
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 59 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 118
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ E D VV
Sbjct: 119 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAG--------SEEDDEVV 170
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 171 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 230
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 231 YIPEVEGVEQV 241
>gi|294678745|ref|YP_003579360.1| NifU domain-containing protein [Rhodobacter capsulatus SB 1003]
gi|294477565|gb|ADE86953.1| NifU domain protein [Rhodobacter capsulatus SB 1003]
Length = 188
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 97/190 (51%), Positives = 135/190 (71%), Gaps = 5/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG V+ EG F++ + A++SPLA RIF + G+ +V+ G DF
Sbjct: 1 MFIQTETTPNPATLKFLPGLDVMPEGVADFTSVEAAQVSPLAGRIFRVAGVKAVFLGADF 60
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD+ +W H RP ++G IMEH+ SG P++ G +G+ D A++
Sbjct: 61 VTVTKDEATEWAHARPAIMGAIMEHYQSGQPVLMGAAAGGHTTGGADTGE----DGAIIS 116
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVARDGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 117 QIKELLDTRVRPAVARDGGDITFHGFEKGVVYLHMQGACAGCPSSTYTLKMGIENLLRHY 176
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 177 IPEVSEVRAV 186
>gi|282154803|ref|NP_001164062.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 1
precursor [Mus musculus]
gi|74211556|dbj|BAE26508.1| unnamed protein product [Mus musculus]
Length = 256
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 119/191 (62%), Gaps = 7/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 57 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 116
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ G E D VV
Sbjct: 117 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETP-----PPPGEAGSSEEDDEVV 171
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 172 AMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQF 231
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 232 YIPEVEGVEQV 242
>gi|154245767|ref|YP_001416725.1| scaffold protein Nfu/NifU [Xanthobacter autotrophicus Py2]
gi|154159852|gb|ABS67068.1| Scaffold protein Nfu/NifU [Xanthobacter autotrophicus Py2]
Length = 186
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 99/189 (52%), Positives = 140/189 (74%), Gaps = 3/189 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL EG + + +A++SPLA R+F + G+A+V+ G DF
Sbjct: 1 MFIQTETTPNPATLKFLPGRSVLGEGTLDLRSHDDADLSPLAQRLFDVRGVAAVFLGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV K + +W ++P +LG IMEHF+SG P++ +G ++ D + D+ +V
Sbjct: 61 VTVTKAEAEWPQIKPAILGAIMEHFMSGAPVLSDGVKPEVADAD---EFYEAKDAEIVAT 117
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+LD RVRPAVA DGGDI F+G++DGIVFL+M+G+CSGCPS++ TLK G+ N+L HFV
Sbjct: 118 IKELLDTRVRPAVANDGGDITFRGFKDGIVFLNMKGSCSGCPSSTATLKNGIENLLKHFV 177
Query: 181 PEVKDIRTV 189
PEV +++ V
Sbjct: 178 PEVTEVQAV 186
>gi|15887702|ref|NP_353383.1| hypothetical protein Atu0351 [Agrobacterium tumefaciens str. C58]
gi|15155261|gb|AAK86168.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 187
Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 109/189 (57%), Positives = 144/189 (76%), Gaps = 2/189 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL G + F NA +A+ SPLA R+F+IPG+ VYFG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGKVVLESGTVEFLNASQAQASPLAERLFTIPGVTGVYFGFDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
ITV KD +W+HL+P +LG IMEHF+SG PI+ ++ ++ + + +V
Sbjct: 61 ITVTKDDAEWQHLKPAILGSIMEHFMSGRPIMGTAIAAEVSDEEGEFFEEGD--ETIVAT 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+LD RVRPAVA+DGGDI F+G+RDG VFL+M+GACSGCPS++ TLK+GV N+L HFV
Sbjct: 119 IKELLDTRVRPAVAQDGGDITFRGFRDGTVFLNMKGACSGCPSSTATLKHGVQNLLRHFV 178
Query: 181 PEVKDIRTV 189
PEV+++ V
Sbjct: 179 PEVREVEAV 187
>gi|209547636|ref|YP_002279553.1| Scaffold protein Nfu/NifU [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533392|gb|ACI53327.1| Scaffold protein Nfu/NifU [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 188
Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 106/188 (56%), Positives = 145/188 (77%), Gaps = 1/188 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPAT KF+PG+VV+ G F +A+EAE SPLA+R+F IPG+ VYFGYDF
Sbjct: 1 MFIQTEATPNPATQKFLPGKVVMENGTAEFRSAEEAEASPLAARLFEIPGVTGVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
I+V KD +W+HL+P +LG IMEHF+SG P++ + + +D G F E D ++V
Sbjct: 61 ISVSKDDAEWQHLKPAILGSIMEHFMSGKPVMGDASILSEDVDA-GDEFFDEGDESIVLT 119
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+L+ RVRPAVA+DGGDI F+G++DG V+L+M+G+C+GCPS++ TLK+GV N+L HFV
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDGKVYLNMKGSCAGCPSSTATLKHGVQNLLRHFV 179
Query: 181 PEVKDIRT 188
PEV+++
Sbjct: 180 PEVQEVIA 187
>gi|114053059|ref|NP_001040031.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial [Bos
taurus]
gi|86823819|gb|AAI05370.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Bos
taurus]
gi|296482427|gb|DAA24542.1| HIRA interacting protein 5 [Bos taurus]
Length = 253
Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 58 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPATAFRSPLARQLFRIEGVKSVFFGPDF 117
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ E D VV
Sbjct: 118 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAG--------SEDDDEVV 169
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 170 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 229
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 230 YIPEVEGVEQV 240
>gi|149727512|ref|XP_001491099.1| PREDICTED: similar to HIRA interacting protein 5 isoform 1 [Equus
caballus]
Length = 253
Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 58 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 117
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ E D VV
Sbjct: 118 ITVTKESEELDWNLLKPDIYATIMDFFASGLPLVTEETSSGEAG--------SEEDDEVV 169
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 170 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 229
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 230 YIPEVEGVEQV 240
>gi|91089707|ref|XP_974909.1| PREDICTED: similar to AGAP000598-PA [Tribolium castaneum]
gi|270011317|gb|EFA07765.1| hypothetical protein TcasGA2_TC005319 [Tribolium castaneum]
Length = 244
Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats.
Identities = 89/192 (46%), Positives = 121/192 (63%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT++TPNP +LKF+PG VL EG I F N + A SPL +F I G+ SV+ G +
Sbjct: 49 MFIQTQETPNPNSLKFLPGVKVLEEGQTIDFPNGQAAYCSPLGKLLFRIEGVKSVFLGPE 108
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FITV K D+ +W+ ++P + IM+ F SG P++++ E DS +
Sbjct: 109 FITVTKTDDEIEWKIIKPEIFATIMDFFASGLPVLNDATPN-------ADTQINEDDSEI 161
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
VQ IKE+LD R+RP V DGGDI+F GY DGIV L ++GAC+ CPS+ TLK GV N+L
Sbjct: 162 VQMIKELLDTRIRPTVQEDGGDIIFMGYDDGIVKLKLQGACTSCPSSIVTLKNGVQNMLQ 221
Query: 178 HFVPEVKDIRTV 189
++PEV + V
Sbjct: 222 FYIPEVLGVEQV 233
>gi|31874276|emb|CAD98142.1| hypothetical protein [Homo sapiens]
Length = 242
Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 59 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 118
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ E D VV
Sbjct: 119 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAG--------SEEDDEVV 170
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 171 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 230
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 231 YIPEVEGVEQV 241
>gi|328545933|ref|YP_004306042.1| nitrogen-fixing NifU-like protein [polymorphum gilvum SL003B-26A1]
gi|326415673|gb|ADZ72736.1| Nitrogen-fixing NifU-like protein [Polymorphum gilvum SL003B-26A1]
Length = 185
Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats.
Identities = 101/189 (53%), Positives = 144/189 (76%), Gaps = 4/189 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL +G F ++ EA SPLA ++F++PG+ +V+FG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRVVLADGTYDFRSSDEAGASPLAEKLFAVPGVVAVFFGHDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
ITV KD DW+H++P +LG IME F+SG P++ + + D+ F D V
Sbjct: 61 ITVTKDDTDWQHMKPAILGAIMEQFMSGTPVMRSAAVQAGGEDE----FFDSDDEETVTV 116
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IK++L+ RVRPAVA+DGGDI FKG+++G+V+LSMRGAC+GCPS++ TL++G+ N+L HFV
Sbjct: 117 IKDLLETRVRPAVAQDGGDITFKGFKEGVVYLSMRGACAGCPSSTATLQHGIQNLLRHFV 176
Query: 181 PEVKDIRTV 189
PEV+++R +
Sbjct: 177 PEVEEVRAI 185
>gi|255568026|ref|XP_002524990.1| HIRA-interacting protein, putative [Ricinus communis]
gi|223535734|gb|EEF37397.1| HIRA-interacting protein, putative [Ricinus communis]
Length = 271
Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 119/191 (62%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP++L F PG+ V+ G++ F NA+ A SPLA ++ I G V+FG DF
Sbjct: 70 MFIQTQSTPNPSSLMFYPGKPVMEVGSVDFPNARAALNSPLAKSLYGIDGTTRVFFGSDF 129
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K D W+ L+P + IM+ + SG P+ + + K + DS V
Sbjct: 130 ITVTKSDDVSWDLLKPEIFAAIMDFYSSGQPLFLDSEIAASK-----DTAIHKDDSETVA 184
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 185 MIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSSSVTLKSGIENMLM 244
Query: 178 HFVPEVKDIRT 188
H+V EVK +
Sbjct: 245 HYVSEVKGVEQ 255
>gi|224080725|ref|XP_002196481.1| PREDICTED: putative iron-sulfur cluster scaffold protein Nfu
variant 3 [Taeniopygia guttata]
Length = 252
Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats.
Identities = 85/190 (44%), Positives = 118/190 (62%), Gaps = 9/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + FS A SPLA ++F I G+ SV+FG DF
Sbjct: 55 MFIQTQDTPNPNSLKFIPGRAVLESRTMEFSTPAAAYCSPLARQLFRIEGVKSVFFGPDF 114
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K+ DW L+P + IM+ F SG P++ + E D VV
Sbjct: 115 ITITKESEDLDWNLLKPDIYATIMDFFASGLPVVTDEAP-------RTDTAASEEDDEVV 167
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 168 LMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVLLKLQGSCTSCPSSLITLKSGIQNMLQF 227
Query: 179 FVPEVKDIRT 188
++PEV+ +
Sbjct: 228 YIPEVEGVEQ 237
>gi|121601928|ref|YP_989428.1| NifU family protein [Bartonella bacilliformis KC583]
gi|120614105|gb|ABM44706.1| NifU family protein [Bartonella bacilliformis KC583]
Length = 192
Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats.
Identities = 97/189 (51%), Positives = 133/189 (70%), Gaps = 1/189 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+V+L EG + F +++ A SPLA+++F I ++ V GYD
Sbjct: 1 MFIQTETTPNPATLKFLPGRVILSEGVLEFRDSEAAALGSPLAAKLFQISNVSGVLLGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K +W+HL+P +LG IMEH +S PI+ G + + E D+ +V
Sbjct: 61 FITVTKSDGEWQHLKPVILGTIMEHLLSNAPIVSTGAAAHAQSHTHNEEFYDEKDADIVS 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA DGGDI F+G+ GIV+L+MRGAC+GCPS++ TLK+G+ N+L HF
Sbjct: 121 TIKELLETRVRPAVANDGGDITFRGFEHGIVYLNMRGACAGCPSSTATLKHGIENLLRHF 180
Query: 180 VPEVKDIRT 188
+PEV +
Sbjct: 181 IPEVVGVEA 189
>gi|34500321|gb|AAQ73785.1| NifU-like protein HIRIP5 [Mus musculus]
Length = 245
Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 119/191 (62%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 47 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 106
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ + E D VV
Sbjct: 107 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTE------ETPPPPGEAGSEEDDEVV 160
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 161 AMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQF 220
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 221 YIPEVEGVEQV 231
>gi|240850980|ref|YP_002972380.1| nitrogen fixation protein [Bartonella grahamii as4aup]
gi|240268103|gb|ACS51691.1| nitrogen fixation protein [Bartonella grahamii as4aup]
Length = 192
Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats.
Identities = 100/189 (52%), Positives = 140/189 (74%), Gaps = 1/189 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VVL EG + F + +EA + SPLA+++F+IP I V+ GYD
Sbjct: 1 MFIQTETTPNPATLKFLPGRVVLSEGVLEFRDPEEAAKNSPLAAKLFNIPNINGVFLGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K + +W+HL+P +LG IMEHF+S +P+I + + + E D+ +V
Sbjct: 61 FITVSKKEGEWQHLKPVILGTIMEHFLSNEPVITTNATIQAQTHALNEEFYDEKDADIVL 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ R+RPAVA DGGDI F+G+ +GIV+L+MRGAC+GCPS++ TLK+G+ N+L HF
Sbjct: 121 TIKELLETRIRPAVANDGGDITFRGFENGIVYLNMRGACAGCPSSTATLKHGIENLLRHF 180
Query: 180 VPEVKDIRT 188
+PEV +
Sbjct: 181 IPEVLGVEA 189
>gi|241156886|ref|XP_002407882.1| conserved hypothetical protein [Ixodes scapularis]
gi|215494245|gb|EEC03886.1| conserved hypothetical protein [Ixodes scapularis]
Length = 260
Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 123/191 (64%), Gaps = 6/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT++TPNP LKF+P VL +G F A+ SPLA +F + G+ +V+FG DF
Sbjct: 48 MFIQTQETPNPNCLKFLPNVKVLEQGTRDFPTLASAKDSPLAKHLFRVEGVKAVFFGSDF 107
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K D+ +W+ L+P + IM+ F +G P+++ G + D E DS V
Sbjct: 108 ITVTKADDETEWQVLKPHLYAAIMDFFTTGLPVVNEDGTEPVAED----TRPKEDDSETV 163
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+++ R+RP V DGGDIV+ G+ DG+V L ++G+C+GCPS+S TLK G+ N+L
Sbjct: 164 LMIKELIETRIRPTVQEDGGDIVYMGFEDGVVKLKLQGSCTGCPSSSVTLKAGIQNMLQF 223
Query: 179 FVPEVKDIRTV 189
+VPEVKD+ V
Sbjct: 224 YVPEVKDVEQV 234
>gi|319898609|ref|YP_004158702.1| NifU-related protein [Bartonella clarridgeiae 73]
gi|319402573|emb|CBI76118.1| NifU-related protein [Bartonella clarridgeiae 73]
Length = 196
Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats.
Identities = 99/189 (52%), Positives = 139/189 (73%), Gaps = 1/189 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNP TLKF+PG +VL +G + F N +EA + SPLA+++F+IP + SV+ GYD
Sbjct: 1 MFIQTESTPNPTTLKFLPGCIVLPQGVLEFYNREEAAKNSPLAAKLFNIPNVKSVFLGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FIT+ K+ +W+HL+P +LG IMEHF+S DP+I + + + F E D+ +V
Sbjct: 61 FITITKNDGEWQHLKPAILGTIMEHFLSNDPVITTNVITQTEAHMLDKEFFDEKDADIVV 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ R+RPAVA DGGDI F G+ +GIV+L+MRGAC+GCPS++ TLK+G+ N+L HF
Sbjct: 121 VIKELLETRIRPAVANDGGDITFCGFENGIVYLNMRGACAGCPSSTATLKHGIENLLRHF 180
Query: 180 VPEVKDIRT 188
+PEV +
Sbjct: 181 IPEVLGVEA 189
>gi|241202790|ref|YP_002973886.1| Scaffold protein Nfu/NifU [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240856680|gb|ACS54347.1| Scaffold protein Nfu/NifU [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 188
Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats.
Identities = 104/188 (55%), Positives = 143/188 (76%), Gaps = 1/188 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPAT KF+PG+VV+ G F + +EA+ SPLA+R+F I G+ VYFGYDF
Sbjct: 1 MFIQTEATPNPATQKFLPGKVVMENGTAEFRSTEEAQASPLAARLFEISGVTGVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
I+V KD DW+HL+P +LG IMEHF+SG P++ + + + D G F E D ++V
Sbjct: 61 ISVSKDNADWQHLKPAILGSIMEHFMSGKPVMGDASILS-EDADAGDEFFDEGDESIVLT 119
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+L+ RVRPAVA+DGGDI F+G++DG V+L+M+G+C+GCPS++ TLK+GV N+L HFV
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDGKVYLNMKGSCAGCPSSTATLKHGVQNLLRHFV 179
Query: 181 PEVKDIRT 188
PEV+++
Sbjct: 180 PEVQEVIA 187
>gi|118590483|ref|ZP_01547885.1| nitrogen-fixing NifU-like protein [Stappia aggregata IAM 12614]
gi|118436946|gb|EAV43585.1| nitrogen-fixing NifU-like protein [Stappia aggregata IAM 12614]
Length = 185
Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats.
Identities = 101/189 (53%), Positives = 146/189 (77%), Gaps = 4/189 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL EG F + +A +SPLA ++F +PG+ +V+FG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRVVLPEGTYDFRSKADAGVSPLAQKLFDVPGVVAVFFGHDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV KD+ DW+H++P +LG+IME F+SG P++ +++ + F D+ V
Sbjct: 61 VTVTKDETDWQHMKPAILGVIMEQFMSGQPVMATSEAENIEEGE----FFEAGDADTVST 116
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+L+ RVRPAVA+DGGDI FKG+++GIV+LSMRGAC+GCPS++ TL++G+ N+L HFV
Sbjct: 117 IKELLETRVRPAVAQDGGDITFKGFKEGIVYLSMRGACAGCPSSTATLQHGIQNLLRHFV 176
Query: 181 PEVKDIRTV 189
PEV+++R +
Sbjct: 177 PEVEEVRPI 185
>gi|227820624|ref|YP_002824594.1| putative scaffold protein Nfu/NifU [Sinorhizobium fredii NGR234]
gi|227339623|gb|ACP23841.1| putative scaffold protein Nfu/NifU [Sinorhizobium fredii NGR234]
Length = 188
Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats.
Identities = 111/190 (58%), Positives = 144/190 (75%), Gaps = 3/190 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ G F + +EA SPLA+R+FSIPG++ VYFGYD
Sbjct: 1 MFIQTEATPNPATLKFLPGKVVMENGTAEFRSEEEARTGSPLAARLFSIPGVSGVYFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K+ +W+HL+P VLG IMEHF+SG PI+ + D + E D A+V
Sbjct: 61 FITVSKEGQEWQHLKPAVLGSIMEHFMSGQPIMSGASRAE--ETDQEGEFYDEGDEAIVA 118
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+LD RVRPAVA+DGGDI F+G++DG VFL+M+GACSGCPS++ TL++GV N+L HF
Sbjct: 119 TIKELLDTRVRPAVAQDGGDITFRGFKDGTVFLNMKGACSGCPSSTATLRHGVQNLLRHF 178
Query: 180 VPEVKDIRTV 189
VPEV+ + +V
Sbjct: 179 VPEVESVESV 188
>gi|148666781|gb|EDK99197.1| mCG130855, isoform CRA_a [Mus musculus]
Length = 255
Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 119/191 (62%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 57 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 116
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ + E D VV
Sbjct: 117 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTE------ETPPPPGEAGSEEDDEVV 170
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 171 AMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQF 230
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 231 YIPEVEGVEQV 241
>gi|15964154|ref|NP_384507.1| hypothetical protein SMc01119 [Sinorhizobium meliloti 1021]
gi|307301299|ref|ZP_07581061.1| Scaffold protein Nfu/NifU [Sinorhizobium meliloti BL225C]
gi|307317970|ref|ZP_07597407.1| Scaffold protein Nfu/NifU [Sinorhizobium meliloti AK83]
gi|15073330|emb|CAC41838.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|306896372|gb|EFN27121.1| Scaffold protein Nfu/NifU [Sinorhizobium meliloti AK83]
gi|306903755|gb|EFN34342.1| Scaffold protein Nfu/NifU [Sinorhizobium meliloti BL225C]
Length = 188
Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats.
Identities = 111/190 (58%), Positives = 144/190 (75%), Gaps = 3/190 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ G F + +EA SPLA+R+FSIPG+ VYFGYD
Sbjct: 1 MFIQTEATPNPATLKFLPGKVVMENGTAEFRSEEEALAGSPLAARLFSIPGVTGVYFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K+ +W+HL+P +LG IMEHF+SG PI+ G + D F E D A+V
Sbjct: 61 FITVSKEAQEWQHLKPAILGSIMEHFMSGQPIMSGAGRAEQ--TDEEDEFFDEGDEAIVA 118
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA+DGGDI F+G++DG VFL+M+GACSGCPS++ TL++GV N+L HF
Sbjct: 119 TIKELLETRVRPAVAQDGGDITFRGFKDGTVFLNMKGACSGCPSSTATLRHGVQNLLRHF 178
Query: 180 VPEVKDIRTV 189
VPEV+ + +V
Sbjct: 179 VPEVEAVESV 188
>gi|291386642|ref|XP_002709869.1| PREDICTED: HIRA interacting protein 5 [Oryctolagus cuniculus]
Length = 255
Score = 273 bits (699), Expect = 7e-72, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 60 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPASAFRSPLARQLFRIEGVKSVFFGPDF 119
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ KD + DW L+P + IM+ F SG P++ E D VV
Sbjct: 120 ITITKDNEELDWNLLKPDIYATIMDFFASGLPLVTEETSSGEAG--------SEEDDEVV 171
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 172 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 231
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 232 YIPEVEGVEQV 242
>gi|197128017|gb|ACH44515.1| putative iron-sulfur cluster scaffold protein Nfu variant 3
[Taeniopygia guttata]
Length = 252
Score = 273 bits (699), Expect = 7e-72, Method: Composition-based stats.
Identities = 85/190 (44%), Positives = 118/190 (62%), Gaps = 9/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + FS A SPLA ++F I G+ SV+FG DF
Sbjct: 55 MFIQTQDTPNPNSLKFIPGRAVLESRTMEFSTPAAAYCSPLARQLFRIEGVKSVFFGPDF 114
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K+ DW L+P + IM+ F SG P++ + E D VV
Sbjct: 115 ITITKESEDLDWNLLKPDIYATIMDFFASGLPVVTDEAS-------RTDTAASEEDDEVV 167
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 168 LMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVLLKLQGSCTSCPSSLITLKSGIQNMLQF 227
Query: 179 FVPEVKDIRT 188
++PEV+ +
Sbjct: 228 YIPEVEGVEQ 237
>gi|282154801|ref|NP_064429.2| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2
precursor [Mus musculus]
gi|205830867|sp|Q9QZ23|NFU1_MOUSE RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; AltName: Full=HIRA-interacting protein 5;
Short=mHIRIP5; Flags: Precursor
gi|12834577|dbj|BAB22965.1| unnamed protein product [Mus musculus]
Length = 255
Score = 273 bits (699), Expect = 8e-72, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 119/191 (62%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 57 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 116
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ + E D VV
Sbjct: 117 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTE------ETPPPPGEAGSEEDDEVV 170
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 171 AMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQF 230
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 231 YIPEVEGVEQV 241
>gi|34500319|gb|AAQ73784.1| NifU-like protein HIRIP5 [Homo sapiens]
gi|194374137|dbj|BAG62381.1| unnamed protein product [Homo sapiens]
Length = 254
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 59 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 118
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ E D VV
Sbjct: 119 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAG--------SEEDDEVV 170
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 171 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 230
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 231 YIPEVEGVEQV 241
>gi|50593021|ref|NP_001002755.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2
[Homo sapiens]
gi|205371805|sp|Q9UMS0|NFU1_HUMAN RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; AltName: Full=HIRA-interacting protein 5;
Flags: Precursor
gi|32967069|gb|AAP92372.1| iron-sulfur cluster scaffold protein Nfu [Homo sapiens]
gi|109731123|gb|AAI13693.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Homo
sapiens]
gi|109731125|gb|AAI13695.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Homo
sapiens]
gi|119620255|gb|EAW99849.1| HIRA interacting protein 5, isoform CRA_a [Homo sapiens]
gi|261860742|dbj|BAI46893.1| NFU1 iron-sulfur cluster scaffold homolog [synthetic construct]
gi|313884030|gb|ADR83501.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)
[synthetic construct]
Length = 254
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 59 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 118
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ E D VV
Sbjct: 119 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAG--------SEEDDEVV 170
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 171 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 230
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 231 YIPEVEGVEQV 241
>gi|254503238|ref|ZP_05115389.1| Scaffold protein Nfu/NifU N terminal domain protein [Labrenzia
alexandrii DFL-11]
gi|222439309|gb|EEE45988.1| Scaffold protein Nfu/NifU N terminal domain protein [Labrenzia
alexandrii DFL-11]
Length = 185
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 103/189 (54%), Positives = 146/189 (77%), Gaps = 4/189 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL EG F + +A SPLA ++F +PG+A+V+FG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRVVLPEGTYDFRSKADAGASPLAEKLFDVPGVAAVFFGHDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV KD DW+H++P +LG+IME F+SG P+++ G D++ + E+ V
Sbjct: 61 VTVTKDDTDWQHMKPAILGVIMEQFMSGQPVMNAGESEDIEEGEFFEEGDQET----VAT 116
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+L+ RVRPAVA+DGGDI FKG+++GIV+LSMRGAC+GCPS++ TL++G+ N+L HFV
Sbjct: 117 IKELLETRVRPAVAQDGGDITFKGFKEGIVYLSMRGACAGCPSSTATLQHGIQNLLRHFV 176
Query: 181 PEVKDIRTV 189
PEV+++R +
Sbjct: 177 PEVEEVRPI 185
>gi|55596270|ref|XP_525775.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 8 [Pan troglodytes]
gi|332813518|ref|XP_001137508.2| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 6 [Pan troglodytes]
Length = 254
Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 59 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 118
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ E D VV
Sbjct: 119 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAG--------SEEDDEVV 170
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 171 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 230
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 231 YIPEVEGVEQV 241
>gi|71021777|ref|XP_761119.1| hypothetical protein UM04972.1 [Ustilago maydis 521]
gi|46100569|gb|EAK85802.1| hypothetical protein UM04972.1 [Ustilago maydis 521]
Length = 293
Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats.
Identities = 84/193 (43%), Positives = 125/193 (64%), Gaps = 8/193 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPN +LKF+PG+ V+ G F + + + SPLA ++F+IPG+ SV++G DF
Sbjct: 72 MFIQTESTPNEDSLKFLPGRQVMESGTHEFLDTRSSMASPLAKKLFNIPGVVSVFYGPDF 131
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD ++ W L+P + IME F SG P+ + D + +++DS VV
Sbjct: 132 VTVSKDAEHQWSILKPEIYSSIMEFFTSGHPLFTDPESAAGSQDTV----ILDTDSEVVA 187
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY---RDGIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+LD RVRPA+ DGGD+ ++G+ DGIV + ++G+C GC S++ TLK G+ +L
Sbjct: 188 MIKELLDTRVRPAIQEDGGDLEYRGFGEDTDGIVKVKLKGSCRGCDSSTVTLKSGIERML 247
Query: 177 NHFVPEVKDIRTV 189
H++PEVK + V
Sbjct: 248 MHYIPEVKGVEQV 260
>gi|282154799|ref|NP_001100076.2| NFU1 iron-sulfur cluster scaffold homolog precursor [Rattus
norvegicus]
gi|149036647|gb|EDL91265.1| histone cell cycle regulation defective interacting protein 5
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 253
Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 57 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 116
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ E D VV
Sbjct: 117 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPPGEAG--------SEEDDEVV 168
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 169 AMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQF 228
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 229 YIPEVEGVEQV 239
>gi|150395264|ref|YP_001325731.1| scaffold protein Nfu/NifU [Sinorhizobium medicae WSM419]
gi|150026779|gb|ABR58896.1| Scaffold protein Nfu/NifU [Sinorhizobium medicae WSM419]
Length = 188
Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats.
Identities = 112/190 (58%), Positives = 145/190 (76%), Gaps = 3/190 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ G F + +EA SPLA+R+FSIPGI VYFGYD
Sbjct: 1 MFIQTEATPNPATLKFLPGKVVMENGTAEFRSEEEALAGSPLAARLFSIPGITGVYFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K+ +W+HL+P +LG IMEHF+SG PI+ G + +D F E D A+V
Sbjct: 61 FITVSKEAQEWQHLKPAILGSIMEHFMSGQPIMSGAGRAEQLDED--EEFFDEGDEAIVA 118
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA+DGGDI F+G++DG VFL+M+GACSGCPS++ TL++GV N+L HF
Sbjct: 119 TIKELLETRVRPAVAQDGGDITFRGFKDGTVFLNMKGACSGCPSSTATLRHGVQNLLRHF 178
Query: 180 VPEVKDIRTV 189
VPEV+ + +V
Sbjct: 179 VPEVESVESV 188
>gi|332226730|ref|XP_003262545.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like isoform 1 [Nomascus leucogenys]
gi|332226732|ref|XP_003262546.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like isoform 2 [Nomascus leucogenys]
Length = 254
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 59 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 118
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K+ + DW L+P + IM+ F SG P++ E D VV
Sbjct: 119 ITITKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAG--------SEEDDEVV 170
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 171 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 230
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 231 YIPEVEGVEQV 241
>gi|298293916|ref|YP_003695855.1| Scaffold protein Nfu/NifU [Starkeya novella DSM 506]
gi|296930427|gb|ADH91236.1| Scaffold protein Nfu/NifU [Starkeya novella DSM 506]
Length = 184
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 102/189 (53%), Positives = 136/189 (71%), Gaps = 5/189 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL G +A EA SPLA+R+F +PG+ V+FG DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRTVLGHGTFEARDADEASRSPLAARLFEVPGVTGVFFGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV K++ +W HL+P +LG IMEHF+SG P++ F E D+ VV
Sbjct: 61 VTVTKEKGEWAHLKPAILGAIMEHFVSGQPVLPED-----HAHVADDAFFEEKDAGVVDT 115
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I+E++D RVRPAVA DGGDI F+GY+DG+VFL+M+G+CSGCPS++ TLK G+ N+L HFV
Sbjct: 116 IRELIDTRVRPAVANDGGDITFRGYKDGVVFLAMKGSCSGCPSSTATLKNGIENLLRHFV 175
Query: 181 PEVKDIRTV 189
P+V ++R V
Sbjct: 176 PDVVEVRPV 184
>gi|163757734|ref|ZP_02164823.1| hypothetical protein HPDFL43_20027 [Hoeflea phototrophica DFL-43]
gi|162285236|gb|EDQ35518.1| hypothetical protein HPDFL43_20027 [Hoeflea phototrophica DFL-43]
Length = 187
Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats.
Identities = 103/190 (54%), Positives = 138/190 (72%), Gaps = 4/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VV+ G F +A+EA S LA ++F IPG+ V++GYD
Sbjct: 1 MFIQTESTPNPATLKFLPGKVVMQSGTADFRDAEEAGATSQLAGKLFGIPGVIGVFYGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FIT+ KD DW+HL+P +LG IMEHF+SG P++ + F D +V
Sbjct: 61 FITITKDDADWQHLKPAILGTIMEHFMSGAPVMSGPVGEVPEG---EEEFFESGDETIVA 117
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L++RVRPAVA+DGGDI F+G+RDG VFL M+GAC+GCPS++ TLK+G+ N+L HF
Sbjct: 118 TIKELLESRVRPAVAQDGGDITFRGFRDGKVFLHMKGACAGCPSSTATLKHGIQNLLRHF 177
Query: 180 VPEVKDIRTV 189
VPEV+++ V
Sbjct: 178 VPEVREVEAV 187
>gi|254454487|ref|ZP_05067924.1| NifU domain protein [Octadecabacter antarcticus 238]
gi|198268893|gb|EDY93163.1| NifU domain protein [Octadecabacter antarcticus 238]
Length = 183
Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats.
Identities = 93/190 (48%), Positives = 132/190 (69%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQ++ TPNPATLKF+PG V+ +G + F ++A SPLAS++F + G+ V+FG DF
Sbjct: 1 MFIQSQQTPNPATLKFLPGVAVMEQGTVSFPTREDAARSPLASQLFDVNGVDGVFFGGDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K D DW L+P +LG IMEHF SG P+++ M + D +V
Sbjct: 61 ITVTKTDDMDWTPLKPAILGAIMEHFTSGQPLLNEDAS-------MSDHAVSDDDDELVT 113
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI+F G+ G+V+L ++GACSGCPS++ TLK G+ N+L H+
Sbjct: 114 QIKELLDTRVRPAVAQDGGDILFHGFERGVVYLQLQGACSGCPSSTATLKGGIENMLRHY 173
Query: 180 VPEVKDIRTV 189
+P+V ++R +
Sbjct: 174 IPDVIEVRAI 183
>gi|114577889|ref|XP_001137105.1| PREDICTED: similar to HIRA interacting protein 5 isoform 1 [Pan
troglodytes]
Length = 240
Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats.
Identities = 85/190 (44%), Positives = 117/190 (61%), Gaps = 10/190 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 59 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 118
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ E D VV
Sbjct: 119 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAG--------SEEDDEVV 170
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 171 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 230
Query: 179 FVPEVKDIRT 188
++PEV+ +
Sbjct: 231 YIPEVEGVEQ 240
>gi|302832552|ref|XP_002947840.1| hypothetical protein VOLCADRAFT_88148 [Volvox carteri f.
nagariensis]
gi|300266642|gb|EFJ50828.1| hypothetical protein VOLCADRAFT_88148 [Volvox carteri f.
nagariensis]
Length = 314
Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats.
Identities = 86/189 (45%), Positives = 124/189 (65%), Gaps = 8/189 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F+PG+ V+ G + FS+A+E SPLA ++F+I GI SV+FG DF
Sbjct: 82 MFIQTQPTPNPNSLMFVPGKPVMESGTLEFSSAREGMKSPLAKKLFAIDGITSVFFGSDF 141
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D + W L+P + IM+ + SG+P++ + DS VV
Sbjct: 142 VTVTKRDDFTWPVLKPDIFAAIMDFYSSGEPLVSDAAAL-----ASSDTAIHPDDSEVVA 196
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDIV+KG+ + G+V + + GACS CPS++ TLK G+ N+L
Sbjct: 197 MIKELLETRIRPAVQEDGGDIVYKGFEEDTGMVMVKLVGACSTCPSSTVTLKNGIENMLM 256
Query: 178 HFVPEVKDI 186
H++PEVK +
Sbjct: 257 HYIPEVKGV 265
>gi|163797123|ref|ZP_02191078.1| nitrogen-fixing NifU-like protein [alpha proteobacterium BAL199]
gi|159177639|gb|EDP62192.1| nitrogen-fixing NifU-like protein [alpha proteobacterium BAL199]
Length = 187
Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats.
Identities = 98/189 (51%), Positives = 131/189 (69%), Gaps = 7/189 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE+TPNPATLKF+PG+ V+ G F + E SPLA +F + G+ V+ GYDF
Sbjct: 1 MFIQTEETPNPATLKFLPGRQVMESGTAEFKSEDETARSPLAQALFQVDGVTGVFLGYDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I+V K D +W ++P VLG+IMEHF++G P I G +D G D+ +V
Sbjct: 61 ISVSKHDGKEWYLMKPGVLGVIMEHFVAGRPTIVEDGASASAPEDAG------EDTEIVS 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA DGGDI F+GY DG+V L M+GACSGCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDTRVRPAVAMDGGDITFQGYEDGVVTLQMQGACSGCPSSTATLKMGIENMLRHY 174
Query: 180 VPEVKDIRT 188
+PEV+++R
Sbjct: 175 IPEVREVRA 183
>gi|50593025|ref|NP_056515.2| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 1
[Homo sapiens]
gi|32967071|gb|AAP92373.1| cytosolic iron-sulfur cluster scaffold protein Nfu [Homo sapiens]
gi|119620256|gb|EAW99850.1| HIRA interacting protein 5, isoform CRA_b [Homo sapiens]
Length = 230
Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 35 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 94
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ E D VV
Sbjct: 95 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAG--------SEEDDEVV 146
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 147 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 206
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 207 YIPEVEGVEQV 217
>gi|114577877|ref|XP_001137587.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 7 [Pan troglodytes]
Length = 230
Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 35 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 94
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ E D VV
Sbjct: 95 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAG--------SEEDDEVV 146
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 147 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 206
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 207 YIPEVEGVEQV 217
>gi|126304005|ref|XP_001381686.1| PREDICTED: similar to iron-sulfur cluster scaffold protein Nfu
[Monodelphis domestica]
Length = 235
Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+ G DF
Sbjct: 40 MFIQTQDTPNPNSLKFIPGKSVLGSQTMDFPTPATAFRSPLARQLFRIEGVKSVFLGPDF 99
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ DW L+P + IM+ F SG PI+ + S E D VV
Sbjct: 100 ITVTKESEDLDWNLLKPDIYATIMDFFASGLPILTE--------ETPSSETATEEDDEVV 151
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 152 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 211
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 212 YIPEVEGVEQV 222
>gi|194897711|ref|XP_001978709.1| GG17526 [Drosophila erecta]
gi|263504966|sp|B3NYF7|NFU1_DROER RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|190650358|gb|EDV47636.1| GG17526 [Drosophila erecta]
Length = 283
Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G F N A SPLA +F + G+ V+FG D
Sbjct: 67 MFIQTQDTPNPDSLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFFGAD 126
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+T+ K + +W ++P V +IM+ F SG P++H+ + +E D V
Sbjct: 127 FVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLHDAQPN-------ADTEILEDDDETV 179
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF GY G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 180 MMIKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 239
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 240 YIPEVESVEQV 250
>gi|154254042|ref|YP_001414866.1| scaffold protein Nfu/NifU [Parvibaculum lavamentivorans DS-1]
gi|154157992|gb|ABS65209.1| Scaffold protein Nfu/NifU [Parvibaculum lavamentivorans DS-1]
Length = 201
Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats.
Identities = 102/190 (53%), Positives = 135/190 (71%), Gaps = 5/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+ VL EG A F A+ A SPLA R+F++ + V+FG D
Sbjct: 16 MFIQTEATPNPATLKFLPGREVLGEGRAADFPTAEAAARSPLAMRLFAVENVTGVFFGSD 75
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K +W+HL+P +LG IMEHF G PI+ + D G+ D +V
Sbjct: 76 FITVTKSGGEWQHLKPALLGAIMEHFTGGAPILFSAAPDDDDAHAAHEGE----DGEIVT 131
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F+GY +G+VFL+M+GAC+GCPS++ TLK GV N+L H+
Sbjct: 132 QIKEILDTRVRPAVAQDGGDITFQGYEEGVVFLNMQGACAGCPSSTVTLKRGVENMLKHY 191
Query: 180 VPEVKDIRTV 189
+PE+ ++R V
Sbjct: 192 IPEIVEVRQV 201
>gi|332226734|ref|XP_003262547.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like isoform 3 [Nomascus leucogenys]
Length = 230
Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 35 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 94
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K+ + DW L+P + IM+ F SG P++ E D VV
Sbjct: 95 ITITKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAG--------SEEDDEVV 146
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 147 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 206
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 207 YIPEVEGVEQV 217
>gi|195169040|ref|XP_002025336.1| GL13432 [Drosophila persimilis]
gi|263504975|sp|B4H303|NFU1_DROPE RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194108792|gb|EDW30835.1| GL13432 [Drosophila persimilis]
Length = 282
Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 119/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G F + A SPLA +F + G+ +V+FG D
Sbjct: 63 MFIQTQDTPNPDSLKFLPGVEVLGKGNTYDFPSGTAAHCSPLAKLLFRVEGVRAVFFGSD 122
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K++ +W ++P V +IM+ F SG PI+H + ++ D V
Sbjct: 123 FITISKEESAEWSLIKPEVFAVIMDFFASGLPILHEARPN-------ADTEILDDDDETV 175
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF Y +G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 176 MMIKELLDTRIRPTVQEDGGDIVFISYENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 235
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 236 YIPEVESVEQV 246
>gi|296087967|emb|CBI35250.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats.
Identities = 88/191 (46%), Positives = 118/191 (61%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNPA+L F PG+ V+ G+ F N++ A SPLA ++ I GI V+FG DF
Sbjct: 1 MFIQTQSTPNPASLMFYPGKPVMEVGSADFPNSRSAMSSPLAKSLYGIDGITRVFFGSDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K D W+ ++P + IM+ + SG P+ + E DS V
Sbjct: 61 ITVTKSDDASWDFIKPEIFAAIMDFYSSGKPLFLDSNTA-----AAMDTAIHEDDSETVA 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 116 MIKELLETRIRPAVQDDGGDIEYRGFDPETGIVKLKMQGACSGCPSSSVTLKSGIENMLM 175
Query: 178 HFVPEVKDIRT 188
H+VPEVK +
Sbjct: 176 HYVPEVKGVEQ 186
>gi|6760408|gb|AAF28338.1|AF213379_1 r10h10-like protein TO42 [Drosophila melanogaster]
gi|6554171|gb|AAF16622.1| TO42 [Drosophila melanogaster]
Length = 286
Score = 270 bits (691), Expect = 6e-71, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 118/191 (61%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G F N A SPLA +F + G+ V+FG D
Sbjct: 70 MFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHNSPLAKLLFRVEGVKGVFFGAD 129
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+T+ K + +W ++P V +IM+ F SG P++++ + +E D V
Sbjct: 130 FVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPN-------ADTEILEDDDETV 182
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF GY G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 183 MMIKELLDTRIRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 242
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 243 YIPEVESVEQV 253
>gi|57529447|ref|NP_001006305.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial [Gallus
gallus]
gi|53136898|emb|CAG32778.1| hypothetical protein RCJMB04_35n21 [Gallus gallus]
Length = 232
Score = 270 bits (691), Expect = 6e-71, Method: Composition-based stats.
Identities = 85/190 (44%), Positives = 118/190 (62%), Gaps = 9/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + FS+ A SPLA ++F I G+ SV+FG DF
Sbjct: 35 MFIQTQDTPNPNSLKFIPGKEVLESRTMEFSSPAAAFCSPLARQLFRIEGVKSVFFGPDF 94
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K+ DW L+P + IM+ F SG P++ E D VV
Sbjct: 95 ITITKESEDLDWNLLKPDIYATIMDFFASGLPVLTEEAP-------RTDTAQSEEDDEVV 147
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 148 LMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 207
Query: 179 FVPEVKDIRT 188
++PEV+ +
Sbjct: 208 YIPEVEGVEQ 217
>gi|195482335|ref|XP_002102005.1| GE15286 [Drosophila yakuba]
gi|263505516|sp|B4PZ52|NFU1_DROYA RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194189529|gb|EDX03113.1| GE15286 [Drosophila yakuba]
Length = 283
Score = 270 bits (691), Expect = 6e-71, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G F N A SPLA +F + G+ V+FG D
Sbjct: 67 MFIQTQDTPNPDSLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFFGAD 126
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+T+ K + +W ++P V +IM+ F SG P++H+ + +E D V
Sbjct: 127 FVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLHDAQPN-------ADTEILEDDDETV 179
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF GY G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 180 MMIKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 239
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 240 YIPEVESVEQV 250
>gi|196003412|ref|XP_002111573.1| hypothetical protein TRIADDRAFT_55734 [Trichoplax adhaerens]
gi|190585472|gb|EDV25540.1| hypothetical protein TRIADDRAFT_55734 [Trichoplax adhaerens]
Length = 236
Score = 270 bits (691), Expect = 6e-71, Method: Composition-based stats.
Identities = 83/191 (43%), Positives = 121/191 (63%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT DTPNP +LKF+PG VL G I +S+A++A SPLA +F + G+ SV+ G DF
Sbjct: 36 MFIQTLDTPNPNSLKFVPGVPVLGSGTIDYSSARDALTSPLAKNLFRVDGVKSVFLGPDF 95
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+T+ + D +W L+P + +IM+ F SG P++ + + DS V
Sbjct: 96 VTISRADDDIEWNTLKPDIYAVIMDFFASGAPVL-------IDYEPATDTAVQPEDSDTV 148
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+L+ R+RP + DGGDIV+ GY +GIV L M+GAC CPSA+ TLK+G+ N+L
Sbjct: 149 AMIKELLETRIRPTLQEDGGDIVYMGYDNGIVKLKMQGACDSCPSATVTLKHGIQNMLQF 208
Query: 179 FVPEVKDIRTV 189
++PEV+ + +
Sbjct: 209 YIPEVEGVEQI 219
>gi|195392814|ref|XP_002055049.1| GJ19011 [Drosophila virilis]
gi|263505537|sp|B4M375|NFU1_DROVI RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194149559|gb|EDW65250.1| GJ19011 [Drosophila virilis]
Length = 298
Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats.
Identities = 88/191 (46%), Positives = 120/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G F + A SPLA +F + G+ +V+FG D
Sbjct: 75 MFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPSGSAAHCSPLAKLLFRVEGVRAVFFGGD 134
Query: 60 FITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K++ +W ++P V +IM+ F SG P+IH + +E D V
Sbjct: 135 FITISKEESGEWGLIKPEVFAVIMDFFASGLPVIHEARPN-------ADTEILEDDDETV 187
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF GY +GIV L M+G+CS CPS+ TLK GV N+L
Sbjct: 188 MMIKELLDTRIRPTVQEDGGDIVFMGYENGIVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 247
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 248 YIPEVESVEQV 258
>gi|319409218|emb|CBI82862.1| NifU-related protein [Bartonella schoenbuchensis R1]
Length = 196
Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats.
Identities = 102/189 (53%), Positives = 141/189 (74%), Gaps = 1/189 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VVL +G + F N+KEA + SPLA+++F+IP ++SV G+D
Sbjct: 1 MFIQTETTPNPATLKFLPGRVVLAKGVLEFHNSKEADQNSPLAAKLFTIPNVSSVLLGHD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FI V K+ +W+HL+P +LG IMEHF+S DP + N + + + E D+ +V
Sbjct: 61 FIAVTKNDGEWQHLKPAILGTIMEHFLSNDPTVINDATLQTQAPEAYEEFYDEKDADIVM 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA DGGDI F+G+ DGIV+L+MRGAC+GCPS++ TLK+G+ N+L HF
Sbjct: 121 TIKEILETRVRPAVANDGGDITFRGFEDGIVYLNMRGACAGCPSSTATLKHGIENLLRHF 180
Query: 180 VPEVKDIRT 188
+PEV +
Sbjct: 181 IPEVLGVEA 189
>gi|198470316|ref|XP_002133420.1| GA22888 [Drosophila pseudoobscura pseudoobscura]
gi|263504850|sp|B5DKJ8|NFU1_DROPS RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|198145392|gb|EDY72048.1| GA22888 [Drosophila pseudoobscura pseudoobscura]
Length = 286
Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 119/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G F + A SPLA +F + G+ +V+FG D
Sbjct: 67 MFIQTQDTPNPDSLKFLPGVEVLGKGNTYDFPSGTAAHCSPLAKLLFRVEGVRAVFFGSD 126
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K++ +W ++P V +IM+ F SG PI+H + ++ D V
Sbjct: 127 FITISKEESAEWSLIKPEVFAVIMDFFASGLPILHEARPN-------ADTEILDDDDETV 179
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF Y +G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 180 MMIKELLDTRIRPTVQEDGGDIVFISYENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 239
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 240 YIPEVESVEQV 250
>gi|73970249|ref|XP_855433.1| PREDICTED: similar to HIRA interacting protein 5 isoform 2 [Canis
familiaris]
Length = 253
Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 58 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 117
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ E D VV
Sbjct: 118 ITVTKESEELDWNLLKPDIYATIMDFFASGLPLVTEETSSGEAG--------SEEDDEVV 169
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 170 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 229
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 230 YIPEVEGVEQV 240
>gi|195357024|ref|XP_002044916.1| GM13534 [Drosophila sechellia]
gi|263505008|sp|B4IMF6|NFU1_DROSE RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194124051|gb|EDW46094.1| GM13534 [Drosophila sechellia]
Length = 283
Score = 270 bits (690), Expect = 8e-71, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G F N A SPLA +F + G+ V+FG D
Sbjct: 67 MFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFFGAD 126
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K + +W ++P V +IM+ F SG P++++ + +E D V
Sbjct: 127 FITISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPN-------ADTEILEDDDETV 179
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF GY G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 180 MMIKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 239
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 240 YIPEVESVEQV 250
>gi|209883678|ref|YP_002287535.1| nitrogen-fixing NifU domain protein [Oligotropha carboxidovorans
OM5]
gi|209871874|gb|ACI91670.1| nitrogen-fixing NifU domain protein [Oligotropha carboxidovorans
OM5]
Length = 187
Score = 270 bits (690), Expect = 8e-71, Method: Composition-based stats.
Identities = 98/188 (52%), Positives = 138/188 (73%), Gaps = 2/188 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG++V+ G + F++ SPLA+++F IPG+ V++ DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRLVIESGTMEFTDRDSTARSPLAAKLFDIPGVTGVFYSSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
ITV K + DW+HL+P +LG IMEH++SG PI+ +G D F E+D+ V
Sbjct: 61 ITVTKGEGDWQHLKPAILGTIMEHYMSGAPILADGAKPDAGPH--AEEFFNEADAETVTI 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IK++++ RVRPAVA DGGDI F+G++DGIVFL M+G+CSGCPS++ TLK+G+ N+L HFV
Sbjct: 119 IKDIIETRVRPAVASDGGDITFRGFKDGIVFLDMKGSCSGCPSSTATLKHGIQNLLKHFV 178
Query: 181 PEVKDIRT 188
P+V ++R
Sbjct: 179 PDVVEVRP 186
>gi|24643765|ref|NP_728443.1| CG32857 [Drosophila melanogaster]
gi|45551492|ref|NP_728447.2| CG32500 [Drosophila melanogaster]
gi|45556188|ref|NP_996529.1| CG33502 [Drosophila melanogaster]
gi|74866115|sp|Q8SY96|NFU1_DROME RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|17946577|gb|AAL49319.1| RH16335p [Drosophila melanogaster]
gi|22831388|gb|AAG22462.2| CG33502 [Drosophila melanogaster]
gi|22831391|gb|AAN09001.1| CG32857 [Drosophila melanogaster]
gi|45446754|gb|AAN09005.2| CG32500 [Drosophila melanogaster]
gi|220949278|gb|ACL87182.1| CG32500-PA [synthetic construct]
gi|220958368|gb|ACL91727.1| CG32500-PA [synthetic construct]
Length = 283
Score = 270 bits (690), Expect = 9e-71, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 118/191 (61%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G F N A SPLA +F + G+ V+FG D
Sbjct: 67 MFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHNSPLAKLLFRVEGVKGVFFGAD 126
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+T+ K + +W ++P V +IM+ F SG P++++ + +E D V
Sbjct: 127 FVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPN-------ADTEILEDDDETV 179
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF GY G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 180 MMIKELLDTRIRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 239
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 240 YIPEVESVEQV 250
>gi|194763845|ref|XP_001964043.1| GF20932 [Drosophila ananassae]
gi|263505256|sp|B3MRT7|NFU1_DROAN RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|190618968|gb|EDV34492.1| GF20932 [Drosophila ananassae]
Length = 286
Score = 270 bits (690), Expect = 9e-71, Method: Composition-based stats.
Identities = 88/191 (46%), Positives = 120/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G F + A SPLA +F + G+ +V+FG D
Sbjct: 67 MFIQTQDTPNPESLKFLPGVEVLGKGNTHDFPSGTTAHGSPLAKLLFRVEGVRAVFFGAD 126
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K++ +W ++P V +IM+ F SG PI+H + +E D V
Sbjct: 127 FITISKEEGAEWSLIKPEVFAVIMDFFASGLPILHESTPN-------ADTEILEDDDETV 179
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF GY +GIV L M+G+CS CPS+ TLK GV N+L
Sbjct: 180 MMIKELLDTRIRPTVQEDGGDIVFMGYENGIVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 239
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 240 YIPEVESVEQV 250
>gi|114326814|ref|YP_743971.1| Fe-S cluster assembly protein NFU [Granulibacter bethesdensis
CGDNIH1]
gi|114314988|gb|ABI61048.1| Fe-S cluster assembly protein NFU [Granulibacter bethesdensis
CGDNIH1]
Length = 186
Score = 270 bits (690), Expect = 9e-71, Method: Composition-based stats.
Identities = 98/190 (51%), Positives = 132/190 (69%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+TE TPNPATLKF+PG+ V+ G F++A A+ SPLA +F +PGIA V+ G DF
Sbjct: 1 MFIETEGTPNPATLKFLPGRDVMPGGTADFASAATAQRSPLALALFELPGIARVFLGADF 60
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K +W L+P VL +M+HF++G P++++ D+ D D +V
Sbjct: 61 VTVTKSSDVEWPELKPQVLAALMDHFVTGRPVLND------TPSDVLEEDIRPEDREIVD 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA DGGDIVF+GYRDG+V L M+GACSGCPS+ TLK+G+ N+L H+
Sbjct: 115 QIKELLDTRVRPAVAGDGGDIVFRGYRDGVVLLHMQGACSGCPSSRATLKHGIENMLRHY 174
Query: 180 VPEVKDIRTV 189
VPEV + V
Sbjct: 175 VPEVLAVEQV 184
>gi|195568040|ref|XP_002107563.1| GD15490 [Drosophila simulans]
gi|263505455|sp|B4R3T1|NFU1_DROSI RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194204973|gb|EDX18549.1| GD15490 [Drosophila simulans]
Length = 283
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 118/191 (61%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G F + A SPLA +F + G+ V+FG D
Sbjct: 67 MFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPHGTTAHSSPLAKLLFRVEGVKGVFFGAD 126
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K + +W ++P V +IM+ F SG P++++ + +E D V
Sbjct: 127 FITISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPN-------ADTEILEDDDETV 179
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF GY G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 180 MMIKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 239
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 240 YIPEVESVEQV 250
>gi|254470949|ref|ZP_05084352.1| nitrogen fixation protein [Pseudovibrio sp. JE062]
gi|211960091|gb|EEA95288.1| nitrogen fixation protein [Pseudovibrio sp. JE062]
Length = 186
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 109/188 (57%), Positives = 145/188 (77%), Gaps = 3/188 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL EG F +A+EA ISPLA ++FSIPG+ ++FG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRVVLPEGTRDFRSAEEAAISPLAEKLFSIPGVVGIFFGHDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
ITV KD+ DW+H+RP +LG IME+F++ PI+ GD D+G F D V
Sbjct: 61 ITVTKDETDWQHMRPAILGAIMENFMANTPILKGEETGDG---DIGEEFFDAEDEETVTM 117
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+L+ RVRPAVA+DGGDI F+GYR+GIV+LSMRGAC+GCPS++ TL +G+ N++ HF+
Sbjct: 118 IKELLETRVRPAVAQDGGDITFRGYREGIVYLSMRGACAGCPSSTATLSHGIQNLMRHFI 177
Query: 181 PEVKDIRT 188
PEV+++R
Sbjct: 178 PEVQEVRQ 185
>gi|83313502|ref|YP_423766.1| HIRA-interacting protein 5 [Magnetospirillum magneticum AMB-1]
gi|82948343|dbj|BAE53207.1| HIRA-interacting protein 5 [Magnetospirillum magneticum AMB-1]
Length = 190
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 101/190 (53%), Positives = 135/190 (71%), Gaps = 10/190 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG VV+ +G F+ A A SPLA+R+F+I G+ SV+ G DF
Sbjct: 9 MFIQTEPTPNPATLKFLPGTVVMGQGTADFAEASRASGSPLATRLFAIDGVGSVFLGTDF 68
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K D DW+ ++P VL IM+H+ SGDP+I+ G D D +V
Sbjct: 69 ITVAKLDAADWQVVKPQVLAAIMDHYNSGDPVINPGSEAAAASGD---------DDGIVM 119
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI+F+ + DGIV+L ++GACSGCPS+S TLK+G+ N+L ++
Sbjct: 120 QIKELLDTRVRPAVAQDGGDIIFRAFEDGIVYLHLQGACSGCPSSSATLKHGIENMLKYY 179
Query: 180 VPEVKDIRTV 189
VPEV ++ V
Sbjct: 180 VPEVMAVQAV 189
>gi|26324295|dbj|BAC24985.1| unnamed protein product [Mus musculus]
Length = 200
Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 119/191 (62%), Gaps = 7/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 1 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 60
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ G E D VV
Sbjct: 61 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETP-----PPPGEAGSSEEDDEVV 115
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 116 AMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQF 175
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 176 YIPEVEGVEQV 186
>gi|195447128|ref|XP_002071076.1| GK25604 [Drosophila willistoni]
gi|263505026|sp|B4NE93|NFU1_DROWI RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194167161|gb|EDW82062.1| GK25604 [Drosophila willistoni]
Length = 289
Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 119/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G F + A SPLA +F + G+ SV+FG D
Sbjct: 68 MFIQTQDTPNPESLKFLPGVEVLGKGNTYDFPSVAAAHCSPLAKLLFRVEGVRSVFFGSD 127
Query: 60 FITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K++ +W ++P V +IM+ F SG PI+H + +E D V
Sbjct: 128 FITISKEEAAEWGLIKPEVFAVIMDFFASGLPILHEARNN-------ADTEILEDDDETV 180
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF Y +G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 181 MMIKELLDTRIRPTVQEDGGDIVFMSYDNGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 240
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 241 YIPEVESVEQV 251
>gi|49474596|ref|YP_032638.1| hypothetical protein BQ10720 [Bartonella quintana str. Toulouse]
gi|49240100|emb|CAF26539.1| hypothetical protein BQ10720 [Bartonella quintana str. Toulouse]
Length = 192
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 100/189 (52%), Positives = 135/189 (71%), Gaps = 1/189 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VVL +G + F N++EA + SPLA+++F+IP + V GYD
Sbjct: 1 MFIQTETTPNPATLKFLPGRVVLSKGVLEFRNSEEAAKNSPLAAKLFNIPNVNGVLLGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FITV K +W+HL+P +LG IMEHF+S P+I + + + E D +V
Sbjct: 61 FITVSKKDGEWQHLKPAILGTIMEHFLSDAPVIKTNATIQAQTHALNEEFYDEKDVDIVS 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA DGGDI F G+ +GIV+L+MRGAC+GCPS++ TLK G+ N+L HF
Sbjct: 121 TIKELLETRVRPAVANDGGDITFCGFENGIVYLNMRGACAGCPSSTATLKTGIENLLRHF 180
Query: 180 VPEVKDIRT 188
+PEV +
Sbjct: 181 IPEVLGVEA 189
>gi|326932642|ref|XP_003212423.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Meleagris gallopavo]
Length = 233
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 84/190 (44%), Positives = 118/190 (62%), Gaps = 9/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + FS+ A SPLA ++F I G+ S++FG DF
Sbjct: 36 MFIQTQDTPNPNSLKFIPGKEVLDSRTMEFSSPAAAFCSPLARQLFRIEGVKSIFFGPDF 95
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K+ DW L+P + IM+ F SG P++ E D VV
Sbjct: 96 ITITKESEDLDWNLLKPDIYATIMDFFASGLPVLTEEAP-------RTDTAQSEEDDEVV 148
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 149 LMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 208
Query: 179 FVPEVKDIRT 188
++PEV+ +
Sbjct: 209 YIPEVEGVEQ 218
>gi|319403933|emb|CBI77521.1| NifU-related protein [Bartonella rochalimae ATCC BAA-1498]
Length = 190
Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 100/189 (52%), Positives = 139/189 (73%), Gaps = 7/189 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNP TLKF+PG++VL +G + F N +EA + SPLA+++F+IP I SV+ GYD
Sbjct: 1 MFIQTESTPNPTTLKFLPGRIVLPQGTLEFHNREEAAKNSPLAAKLFNIPNIKSVFLGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FIT+ K+ +W+HL+P +LG IME+F+S DP+I + + F E D+ +V
Sbjct: 61 FITITKNDGEWQHLKPAILGTIMEYFLSNDPVITT------EANLPNKEFFDEKDTDIVV 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA DGGDI F G+ +GIV+L+MRGAC+GCPS++ TLK+G+ N+L HF
Sbjct: 115 VIKELLETRVRPAVANDGGDITFCGFENGIVYLNMRGACAGCPSSTATLKHGIENLLRHF 174
Query: 180 VPEVKDIRT 188
+PEV +
Sbjct: 175 IPEVLGVEA 183
>gi|114706882|ref|ZP_01439782.1| nitrogen fixation protein [Fulvimarina pelagi HTCC2506]
gi|114537830|gb|EAU40954.1| nitrogen fixation protein [Fulvimarina pelagi HTCC2506]
Length = 187
Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 103/189 (54%), Positives = 140/189 (74%), Gaps = 4/189 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VVL +G F++ EA + SPLA+R+F + G+ V+FG+D
Sbjct: 1 MFIQTEVTPNPATLKFLPGRVVLEQGTEEFTSIDEAAQRSPLAARLFEVDGVTGVFFGFD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
F+TV KDQ DW HL+P +L +MEHF++ P++ + + G F E D V
Sbjct: 61 FVTVTKDQGDWAHLKPAILAGLMEHFVANRPVMAETSAMNS---EPGEEFFDEGDKETVA 117
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ RVRPAVA+DGGDI F+GYRDGIV+L+MRGACSGCPS++ TLK+G+ N+L HF
Sbjct: 118 TIKELIETRVRPAVAQDGGDITFRGYRDGIVYLNMRGACSGCPSSTATLKHGIQNLLRHF 177
Query: 180 VPEVKDIRT 188
VPEV+++
Sbjct: 178 VPEVEEVEA 186
>gi|291225596|ref|XP_002732785.1| PREDICTED: GM13534-like [Saccoglossus kowalevskii]
Length = 275
Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 115/191 (60%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT +TPNP +LKFIPG VL G + F A+ A SPLA ++F I G+ SV+ G DF
Sbjct: 65 MFIQTHETPNPNSLKFIPGVPVLGSGTMDFPTARVAHGSPLARQLFRIDGVKSVFLGPDF 124
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K D +W+ ++P V +M+ F +G PI+ + + D V
Sbjct: 125 ITITKHDDDSEWKIIKPEVYAAVMDFFATGLPILTDEQPS-------ADTEIHPDDDETV 177
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIV+ G+ GIV L M+G+C+ CPS+ TLK GV N+L
Sbjct: 178 AMIKELLDTRIRPTVQEDGGDIVYMGFEKGIVKLKMQGSCTSCPSSVVTLKSGVQNMLQF 237
Query: 179 FVPEVKDIRTV 189
+VPEV + V
Sbjct: 238 YVPEVLSVEQV 248
>gi|116250169|ref|YP_766007.1| nifU iron-sulphur cluster scaffold protein [Rhizobium leguminosarum
bv. viciae 3841]
gi|115254817|emb|CAK05891.1| putative nifU iron-sulphur cluster scaffold protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 188
Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats.
Identities = 101/188 (53%), Positives = 139/188 (73%), Gaps = 1/188 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPAT KF+PG+VV+ G F + +EA+ SPLA+R+F I G+ VYFGYDF
Sbjct: 1 MFIQTEATPNPATQKFLPGKVVMENGTAEFRSTEEAQASPLAARLFEISGVTGVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
I+V KD DW+HL+P +LG IMEHF+SG P++ + + D D ++V
Sbjct: 61 ISVSKDNADWQHLKPAILGSIMEHFMSGKPVMGDASILSEDADADDEFFDE-GDESIVLT 119
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+L+ RVRPAVA+DGGDI F+G++DG V+L+M+G+C+GCPS++ TLK+GV N+L HFV
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDGKVYLNMKGSCAGCPSSTATLKHGVQNLLRHFV 179
Query: 181 PEVKDIRT 188
PEV+++
Sbjct: 180 PEVQEVIA 187
>gi|281346707|gb|EFB22291.1| hypothetical protein PANDA_002901 [Ailuropoda melanoleuca]
Length = 186
Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 4 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 63
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ E D VV
Sbjct: 64 ITVTKESEELDWNLLKPDIYATIMDFFASGLPLVTEETSSGEAG--------SEEDDEVV 115
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 116 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 175
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 176 YIPEVEGVEQV 186
>gi|307942729|ref|ZP_07658074.1| putative NFU1 iron-sulfur cluster scaffold-like protein [Roseibium
sp. TrichSKD4]
gi|307773525|gb|EFO32741.1| putative NFU1 iron-sulfur cluster scaffold-like protein [Roseibium
sp. TrichSKD4]
Length = 186
Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats.
Identities = 105/190 (55%), Positives = 146/190 (76%), Gaps = 5/190 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL G F++ EA SPLA ++F +PG+A+++FGYDF
Sbjct: 1 MFIQTEATPNPATLKFLPGRVVLETGTYDFTSPTEAGASPLAEKLFQVPGVAAIFFGYDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K + DW+H++P +LG IME F+SG P++ +G D + + F E+D V
Sbjct: 61 ITVTKKEDTDWQHMKPAILGAIMEQFMSGQPVMASGQAEDTEEGE----FFEEADQETVT 116
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IK++LD RVRPAVA+DGGDI FKG+++GIV+LSMRGAC+GCPS++ TL++G+ N+L HF
Sbjct: 117 VIKDLLDTRVRPAVAQDGGDITFKGFKEGIVYLSMRGACAGCPSSTATLQHGIQNLLKHF 176
Query: 180 VPEVKDIRTV 189
VPEV+++R +
Sbjct: 177 VPEVQEVRPI 186
>gi|195059008|ref|XP_001995543.1| GH17809 [Drosophila grimshawi]
gi|263505270|sp|B4JWR9|NFU1_DROGR RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|193896329|gb|EDV95195.1| GH17809 [Drosophila grimshawi]
Length = 298
Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 119/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G F +A A SPLA +F + G+ +V+FG D
Sbjct: 79 MFIQTQDTPNPDSLKFLPGVEVLGKGNTYDFPSATAAHCSPLAKLLFRVEGVRAVFFGSD 138
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K++ +W ++P V +IM+ F SG PI+H + +E D V
Sbjct: 139 FITISKEENGEWGLIKPEVFAVIMDFFASGLPILHEARPN-------ADTEILEDDDETV 191
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF Y G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 192 MMIKELLDTRIRPTVQEDGGDIVFISYEKGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 251
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 252 YIPEVESVEQV 262
>gi|18402817|ref|NP_566673.1| NFU4; structural molecule [Arabidopsis thaliana]
gi|75273382|sp|Q9LIG6|NIFU4_ARATH RecName: Full=NifU-like protein 4, mitochondrial; Short=AtNfu-III;
Short=AtNfu4; Flags: Precursor
gi|13899085|gb|AAK48964.1|AF370537_1 Unknown protein [Arabidopsis thaliana]
gi|9294004|dbj|BAB01907.1| unnamed protein product [Arabidopsis thaliana]
gi|18377516|gb|AAL66924.1| unknown protein [Arabidopsis thaliana]
gi|28207822|emb|CAD55561.1| NFU4 protein [Arabidopsis thaliana]
gi|332642927|gb|AEE76448.1| NifU-like protein 4 [Arabidopsis thaliana]
Length = 283
Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 117/191 (61%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP++L F PG+ V+ G+ F N + A SPLA I+SI G+ V+FG DF
Sbjct: 80 MFIQTQSTPNPSSLMFYPGKPVMEVGSADFPNVRSALGSPLAKSIYSIDGVVRVFFGSDF 139
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D W+ L+P + +M+ + SG P+ + K E DS V
Sbjct: 140 VTVTKSDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQAAAAK-----DTAISEDDSETVA 194
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI + G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 195 MIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKSGIENMLM 254
Query: 178 HFVPEVKDIRT 188
H+V EVK +
Sbjct: 255 HYVSEVKGVEQ 265
>gi|46201919|ref|ZP_00054106.2| COG0694: Thioredoxin-like proteins and domains [Magnetospirillum
magnetotacticum MS-1]
Length = 182
Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats.
Identities = 101/190 (53%), Positives = 135/190 (71%), Gaps = 10/190 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG VV+ +G F+ A A SPLA+R+F+I G+ SV+ G DF
Sbjct: 1 MFIQTEPTPNPATLKFLPGTVVMGQGTADFAEASRASGSPLATRLFAIEGVGSVFLGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K D DW+ ++P VL IM+H+ SGDP+I+ G D D +V
Sbjct: 61 ITVAKADSADWQVVKPQVLAAIMDHYNSGDPVINPGSEAASASGD---------DDGIVM 111
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI+F+ + DGIV+L ++GACSGCPS+S TLK+G+ N+L ++
Sbjct: 112 QIKELLDTRVRPAVAQDGGDIIFRAFEDGIVYLHLQGACSGCPSSSATLKHGIENMLKYY 171
Query: 180 VPEVKDIRTV 189
VPEV ++ V
Sbjct: 172 VPEVMAVQAV 181
>gi|319406947|emb|CBI80584.1| NifU-related protein [Bartonella sp. 1-1C]
Length = 190
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 101/189 (53%), Positives = 139/189 (73%), Gaps = 7/189 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNP TLKF+PG++VL +G + F N +EA + SPLA+++F+IP I SV+ GYD
Sbjct: 1 MFIQTESTPNPTTLKFLPGRIVLPQGTLEFHNREEAAKNSPLAAKLFNIPNIKSVFLGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FIT+ K+ +W+HL+P +LG IMEHF+S DP+I + + F E D+ +V
Sbjct: 61 FITITKNDGEWQHLKPAILGTIMEHFLSNDPVITT------ETNIPNKEFFDEKDTDIVI 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA DGGDI F G+ +GIV+L+MRGAC+GCPS++ TLK+G+ N+L HF
Sbjct: 115 VIKELLETRVRPAVANDGGDITFCGFENGIVYLNMRGACAGCPSSTATLKHGIENLLRHF 174
Query: 180 VPEVKDIRT 188
+PEV +
Sbjct: 175 IPEVLGVEA 183
>gi|159465189|ref|XP_001690805.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
gi|158279491|gb|EDP05251.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
Length = 319
Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats.
Identities = 87/189 (46%), Positives = 123/189 (65%), Gaps = 8/189 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F+PG+ V+ G + F +A+E SPLA ++F++ GI SV+FG DF
Sbjct: 84 MFIQTQPTPNPNSLMFVPGKPVMQSGTMEFGSAREGMKSPLAKKLFAVDGITSVFFGSDF 143
Query: 61 ITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+T+ KD+Y W L+P V IME + SG+ +I + DS VV
Sbjct: 144 VTITKKDEYSWPVLKPDVFAAIMEFYASGEALISDADAL-----AASDTAIHPDDSEVVA 198
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDIVFKG+ + G+V + + GACS CPS++ TLK G+ N+L
Sbjct: 199 MIKELLETRIRPAVQEDGGDIVFKGFEEDTGMVQVKLVGACSTCPSSTVTLKNGIENMLM 258
Query: 178 HFVPEVKDI 186
H++PEVK +
Sbjct: 259 HYIPEVKGV 267
>gi|66543732|ref|XP_395826.2| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Apis mellifera]
Length = 275
Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats.
Identities = 86/192 (44%), Positives = 121/192 (63%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG +L +G F NA + SPLA +F I G+ SV+FG D
Sbjct: 64 MFIQTQDTPNPNSLKFLPGVKILEQGQTKDFPNAIDGYCSPLAKMLFRIDGVKSVFFGPD 123
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FIT+ K + +W+ L+P + +IM+ F SG P++ + + DS +
Sbjct: 124 FITITKADEDVEWKLLKPEIFAVIMDFFASGLPVLTDEQPA-------ADTQISDDDSEI 176
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
VQ IKE+LD R+RP V DGGDIVF G+ +GIV L M+G+C+ CPS+ TLK GV N++
Sbjct: 177 VQMIKELLDTRIRPTVQEDGGDIVFMGFEEGIVKLKMQGSCTSCPSSVITLKNGVQNMMQ 236
Query: 178 HFVPEVKDIRTV 189
++PEV + V
Sbjct: 237 FYIPEVLGVVQV 248
>gi|83594860|ref|YP_428612.1| nitrogen-fixing NifU-like [Rhodospirillum rubrum ATCC 11170]
gi|83577774|gb|ABC24325.1| Nitrogen-fixing NifU-like [Rhodospirillum rubrum ATCC 11170]
Length = 183
Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats.
Identities = 94/190 (49%), Positives = 133/190 (70%), Gaps = 9/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPA+LKF+PG+ VL G F++ A SPLA R+F+I G+ +Y G DF
Sbjct: 1 MFIQTERTPNPASLKFLPGKAVLPGGGRDFADVGAAGPSPLARRLFAIDGVTGIYLGADF 60
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K + DW+ ++P VLG IMEHF SG+P++ G + D VV+
Sbjct: 61 ITVSKAEAEDWQVIKPLVLGAIMEHFTSGEPVLIAGTAAESAGSA--------EDDEVVR 112
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+I+++L+ RVRPAVA+DGGDIVF ++DG+V+L +RG+CSGCPS++ TLK+G+ N+L H+
Sbjct: 113 QIRDLLETRVRPAVAQDGGDIVFDRFQDGVVYLHLRGSCSGCPSSTATLKHGIENMLRHY 172
Query: 180 VPEVKDIRTV 189
+PEV+ + V
Sbjct: 173 IPEVEAVEAV 182
>gi|114108171|gb|AAI23134.1| Lpd-8 protein [Xenopus laevis]
Length = 249
Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats.
Identities = 83/191 (43%), Positives = 120/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP ++KFIPG+ VL + F N A SPLA +F I G+ SV+FG DF
Sbjct: 53 MFIQTQDTPNPNSVKFIPGRAVLDARTMDFPNPASAFCSPLARHLFRIEGVKSVFFGPDF 112
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K + DW ++P + IM+ F +G P++ + G E + VV
Sbjct: 113 ITITKNGEDMDWNLIKPDIFATIMDFFSTGLPVVTDEAP-------RGDPAASEEEDEVV 165
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG++DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 166 AMIKELLDTRIRPTVQEDGGDVLYKGFQDGIVQLKLQGSCTSCPSSIITLKSGIQNMLQF 225
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 226 YIPEVEGVEQV 236
>gi|6013069|emb|CAB57314.1| HIRA-interacting protein (HIRIP5) [Mus musculus]
gi|17390830|gb|AAH18355.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Mus
musculus]
Length = 199
Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 119/191 (62%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 1 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 60
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ + E D VV
Sbjct: 61 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTE------ETPPPPGEAGSEEDDEVV 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 115 AMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQF 174
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 175 YIPEVEGVEQV 185
>gi|315122122|ref|YP_004062611.1| nitrogen fixation protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495524|gb|ADR52123.1| nitrogen fixation protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 190
Score = 267 bits (683), Expect = 6e-70, Method: Composition-based stats.
Identities = 156/190 (82%), Positives = 171/190 (90%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPGQVVLV G++HFSNAKEA ISPLASRIFSI GI SVY GYDF
Sbjct: 1 MFIQTEYTPNPATLKFIPGQVVLVRGSVHFSNAKEAGISPLASRIFSISGIVSVYLGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKL-DDMGSGDFIESDSAVVQ 119
ITV KD+YDWE L+P +LG+IMEHF+SGDPII NGGL + + DD+G GDF ESDS +VQ
Sbjct: 61 ITVAKDKYDWEQLKPLILGVIMEHFMSGDPIISNGGLDAVNVNDDLGEGDFSESDSVIVQ 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK+VLDNRVRPAVARDGGDIVFKGYRDGIVFLSM GACSGCPSA+ETLKYGV N+LNHF
Sbjct: 121 KIKDVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMMGACSGCPSATETLKYGVINLLNHF 180
Query: 180 VPEVKDIRTV 189
VPEVKDIRTV
Sbjct: 181 VPEVKDIRTV 190
>gi|146326964|gb|AAI41716.1| Lpd-8 protein [Xenopus laevis]
Length = 250
Score = 267 bits (682), Expect = 6e-70, Method: Composition-based stats.
Identities = 83/191 (43%), Positives = 120/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP ++KFIPG+ VL + F N A SPLA +F I G+ SV+FG DF
Sbjct: 54 MFIQTQDTPNPNSVKFIPGRAVLDARTMDFPNPASAFCSPLARHLFRIEGVKSVFFGPDF 113
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K + DW ++P + IM+ F +G P++ + G E + VV
Sbjct: 114 ITITKNGEDMDWNLIKPDIFATIMDFFSTGLPVVTDEAP-------RGDPAASEEEDEVV 166
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG++DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 167 AMIKELLDTRIRPTVQEDGGDVLYKGFQDGIVQLKLQGSCTSCPSSIITLKSGIQNMLQF 226
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 227 YIPEVEGVEQV 237
>gi|195132295|ref|XP_002010579.1| GI14603 [Drosophila mojavensis]
gi|193909029|gb|EDW07896.1| GI14603 [Drosophila mojavensis]
Length = 259
Score = 267 bits (682), Expect = 7e-70, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 120/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G F + A SPLA +F + G+ +V+FG D
Sbjct: 40 MFIQTQDTPNPDSLKFLPGVEVLGKGNTYDFPSGAAAHCSPLAKLLFRVEGVRAVFFGGD 99
Query: 60 FITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K++ +W ++P V +IM+ F SG PI+H + +E D V
Sbjct: 100 FITISKEESGEWGLIKPEVFAIIMDFFASGLPILHEARAN-------ADTEILEDDDETV 152
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIVF GY +G+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 153 MMIKELLDTRIRPTVQEDGGDIVFMGYENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 212
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 213 YIPEVESVEQV 223
>gi|192288888|ref|YP_001989493.1| Scaffold protein Nfu/NifU [Rhodopseudomonas palustris TIE-1]
gi|192282637|gb|ACE99017.1| Scaffold protein Nfu/NifU [Rhodopseudomonas palustris TIE-1]
Length = 188
Score = 267 bits (682), Expect = 7e-70, Method: Composition-based stats.
Identities = 94/179 (52%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+ VL G + F++A +A SPLA+R+F I G++ V++G DF
Sbjct: 1 MFIQTEPTPNPATLKFIPGRRVLDSGTLEFTDASQAARSPLAARLFDIDGVSGVFYGTDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV KD+ +W+HL+P +LG IMEH++SG PI+ +G + ++D+ V+
Sbjct: 61 VTVTKDKGEWQHLKPAILGAIMEHYMSGTPILADGKSDGEDG--DDDEFYADADAETVEI 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IK++++ RVRPAVA DGGDI F+G++DGIV+L+MRGAC+GCPS++ TL++G+ N+L HF
Sbjct: 119 IKDLIETRVRPAVANDGGDITFRGFKDGIVYLNMRGACAGCPSSTATLQHGIQNLLKHF 177
>gi|296533479|ref|ZP_06896057.1| NifU domain protein [Roseomonas cervicalis ATCC 49957]
gi|296266192|gb|EFH12239.1| NifU domain protein [Roseomonas cervicalis ATCC 49957]
Length = 187
Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats.
Identities = 101/191 (52%), Positives = 133/191 (69%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE-GAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFI+TE TPNPATLKF+PGQ V+ G F+NA A SPLA R+F + G+A ++ G D
Sbjct: 1 MFIETEATPNPATLKFLPGQDVMGSRGTADFTNAGAAARSPLAERLFGLEGVARIFLGSD 60
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ L+P VLG IMEH ++G P++ + D D +D+ +V
Sbjct: 61 FITVTKAEGVEWQALKPQVLGAIMEHVMAGRPVVLE------EEGDAALEDSDPADAEIV 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+IKE+LD RVRPAVA DGGDIVF+G+RDGIV L ++GACSGCPS+ TLK+GV N+L H
Sbjct: 115 AQIKELLDTRVRPAVAGDGGDIVFRGFRDGIVKLHLQGACSGCPSSRATLKHGVENMLRH 174
Query: 179 FVPEVKDIRTV 189
+VPEV + V
Sbjct: 175 YVPEVMAVEQV 185
>gi|70990736|ref|XP_750217.1| NifU-related protein [Aspergillus fumigatus Af293]
gi|66847849|gb|EAL88179.1| NifU-related protein [Aspergillus fumigatus Af293]
gi|159130693|gb|EDP55806.1| NifU-related protein [Aspergillus fumigatus A1163]
Length = 326
Score = 266 bits (681), Expect = 9e-70, Method: Composition-based stats.
Identities = 80/201 (39%), Positives = 120/201 (59%), Gaps = 12/201 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE+TPNP LKFIP VL EG + + + + SPLA+ +F++ G+
Sbjct: 85 IFIQTENTPNPDALKFIPNHRVLPEGFPTSFLEYLSPRSTLAPPHPSPLAANLFNVDGVT 144
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD-- 109
SV++G DFITV K +W H++P V +I + SG+ I++ + G +
Sbjct: 145 SVFYGPDFITVNKSSDANWAHIKPEVFSLITQAVTSGEAIVNTVEKTGEHAQESGEQESL 204
Query: 110 -FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
F E D VV IKE+L+ R+RPA+ DGGDI +G+ +GIV L +RGAC C S++ TL
Sbjct: 205 SFSEEDDEVVSMIKELLETRIRPAIQEDGGDIELRGFENGIVKLKLRGACRTCDSSTVTL 264
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ ++L H++ EV+ + V
Sbjct: 265 KNGIESMLMHYIEEVQGVEQV 285
>gi|332813521|ref|XP_003309120.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Pan troglodytes]
gi|5738608|emb|CAB53015.1| HIRA-interacting protein HIRIP5 [Homo sapiens]
gi|62822279|gb|AAY14828.1| unknown [Homo sapiens]
gi|189054196|dbj|BAG36716.1| unnamed protein product [Homo sapiens]
Length = 196
Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 1 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 60
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ E D VV
Sbjct: 61 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAG--------SEEDDEVV 112
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 113 AMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQF 172
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 173 YIPEVEGVEQV 183
>gi|86747711|ref|YP_484207.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris HaA2]
gi|86570739|gb|ABD05296.1| Nitrogen-fixing NifU-like [Rhodopseudomonas palustris HaA2]
Length = 188
Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats.
Identities = 97/179 (54%), Positives = 134/179 (74%), Gaps = 1/179 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+VVL G + F++ +A SPLA R+F + G++ V++G DF
Sbjct: 1 MFIQTEPTPNPATLKFIPGRVVLDSGTMEFTDRSQAARSPLAERLFDVDGVSGVFYGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV KD DW+HL+P +LG IMEH++SG PI+ +G D F E D+ V+
Sbjct: 61 VTVTKDGGDWQHLKPAILGAIMEHYMSGAPILADGKTDGDAG-DEDDEFFAERDAETVEI 119
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IK++++ RVRPAVA DGGDI F+G++DGIV+L+M+GACSGCPS++ TL++G+ N+L HF
Sbjct: 120 IKDLIETRVRPAVANDGGDITFRGFKDGIVYLAMKGACSGCPSSTATLQHGIQNLLKHF 178
>gi|39933530|ref|NP_945806.1| NifU-like domain-containing protein [Rhodopseudomonas palustris
CGA009]
gi|39647376|emb|CAE25897.1| possible NifU-like domain (residues 119-187) [Rhodopseudomonas
palustris CGA009]
Length = 188
Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats.
Identities = 94/179 (52%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+ VL G + F++A +A SPLA+R+F I G++ V++G DF
Sbjct: 1 MFIQTEPTPNPATLKFIPGRSVLDSGTLEFTDASQAARSPLAARLFDIDGVSGVFYGTDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+TV KD+ +W+HL+P +LG IMEH++SG PI+ +G + ++D+ V+
Sbjct: 61 VTVTKDKGEWQHLKPAILGAIMEHYMSGTPILADGKSDGEDG--DDDEFYADADAETVEI 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IK++++ RVRPAVA DGGDI F+G++DGIV+L+MRGAC+GCPS++ TL++G+ N+L HF
Sbjct: 119 IKDLIETRVRPAVANDGGDITFRGFKDGIVYLNMRGACAGCPSSTATLQHGIQNLLKHF 177
>gi|42562675|ref|NP_175550.2| NFU5; ATP binding / structural molecule [Arabidopsis thaliana]
gi|75169527|sp|Q9C8J2|NIFU5_ARATH RecName: Full=NifU-like protein 5, mitochondrial; Short=AtNfu-I;
Short=AtNfu5; Flags: Precursor
gi|12325368|gb|AAG52627.1|AC024261_14 unknown protein; 90320-88994 [Arabidopsis thaliana]
gi|28207824|emb|CAD55562.1| NFU5 protein [Arabidopsis thaliana]
gi|105829764|gb|ABF74703.1| At1g51390 [Arabidopsis thaliana]
gi|110741134|dbj|BAE98660.1| hypothetical protein [Arabidopsis thaliana]
gi|332194540|gb|AEE32661.1| NifU-like protein 5 [Arabidopsis thaliana]
Length = 275
Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 119/191 (62%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP++L F PG+ V+ G+ F N++ A SPLA IF+I G+ V++G DF
Sbjct: 75 MFIQTQSTPNPSSLMFSPGKPVMEIGSADFPNSRSAMSSPLAKAIFAIDGVVRVFYGSDF 134
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D W+ L+P + ++M+ + SG P+ + K E DS V
Sbjct: 135 VTVTKSDDVTWDILKPDIFAVVMDFYSSGQPLFLDSQATAAK-----DTAIHEDDSETVA 189
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RP+V DGGDI + G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 190 MIKELLETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLM 249
Query: 178 HFVPEVKDIRT 188
H+V EVK +
Sbjct: 250 HYVSEVKGVEQ 260
>gi|27375911|ref|NP_767440.1| hypothetical protein bll0800 [Bradyrhizobium japonicum USDA 110]
gi|27349049|dbj|BAC46065.1| bll0800 [Bradyrhizobium japonicum USDA 110]
Length = 189
Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 96/188 (51%), Positives = 138/188 (73%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+VV+ + F++ + A SPLA ++F +PG+ V++G DF
Sbjct: 1 MFIQTEATPNPATLKFIPGRVVVDGSPMEFASRESAARSPLAEKLFEVPGVTGVFYGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
ITV K +W+ L+P +LG IMEH++SG P++ +G D F E+D+ V
Sbjct: 61 ITVTKANGEWQQLKPAILGAIMEHYMSGAPLLADGAAQSDADLDDEDEFFDEADAETVDM 120
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IK++++ RVRPAVA DGGDI F+G++DGIV+L+M+GACSGCPS++ TL++G+ N+L HFV
Sbjct: 121 IKDLIETRVRPAVANDGGDITFRGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKHFV 180
Query: 181 PEVKDIRT 188
P+V ++R
Sbjct: 181 PDVVEVRP 188
>gi|217979031|ref|YP_002363178.1| Scaffold protein Nfu/NifU [Methylocella silvestris BL2]
gi|217504407|gb|ACK51816.1| Scaffold protein Nfu/NifU [Methylocella silvestris BL2]
Length = 187
Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats.
Identities = 94/189 (49%), Positives = 133/189 (70%), Gaps = 2/189 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+TE TPNP TLKF+PG+ V+ G + ++A SPLA +F + G+ V+FG DF
Sbjct: 1 MFIETETTPNPKTLKFLPGRPVMSAGTLDIKEPEDARQSPLAEALFELDGVKGVFFGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
ITV DW+ L+P VLG IMEHF+SGDP+++ + D F ESD+ V
Sbjct: 61 ITVTNANEDWQELKPTVLGAIMEHFLSGDPLLNE--HAHVSPDAGEREFFEESDAETVTA 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IK++++ VRPAVA DGGDI F+GYRDGIV+L+M+G+CSGCPS++ TLK+G+ N+L H+V
Sbjct: 119 IKQLIETHVRPAVANDGGDIKFRGYRDGIVYLAMKGSCSGCPSSTATLKHGIQNLLKHYV 178
Query: 181 PEVKDIRTV 189
P+V+ + ++
Sbjct: 179 PDVQSVESI 187
>gi|209965893|ref|YP_002298808.1| NifU-like domain protein [Rhodospirillum centenum SW]
gi|209959359|gb|ACI99995.1| NifU-like domain protein [Rhodospirillum centenum SW]
Length = 186
Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats.
Identities = 96/190 (50%), Positives = 132/190 (69%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE+TPNPATLKF+PG+ VL G F+ + A SPLA+R+F + G+ V+ G DF
Sbjct: 1 MFIQTEETPNPATLKFLPGRDVLGRGTADFAGPETAGPSPLAARLFEVEGVTRVFLGADF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + DW L+P VLG++MEHF +G P++ G D + + D VV
Sbjct: 61 VTVTKTEDKDWYALKPSVLGVLMEHFTAGRPVLLEGTADDGHAEAANAEDEE-----VVA 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ G+V+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKELLDIRVRPAVAQDGGDITFHGFDKGVVYLHMKGACAGCPSSTATLKAGIENLLRHY 175
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 176 IPEVVEVRQV 185
>gi|77462766|ref|YP_352270.1| nitrogen-fixing NifU [Rhodobacter sphaeroides 2.4.1]
gi|77387184|gb|ABA78369.1| Nitrogen-fixing NifU [Rhodobacter sphaeroides 2.4.1]
Length = 186
Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats.
Identities = 99/190 (52%), Positives = 133/190 (70%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ+VL G F+ A+ A SPLA RIF+ G+++V+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQMVLEAGTADFATAEAAATSPLARRIFAAGGVSAVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+ V K D+ W+H++P +LG IMEH+ SG P++ G D VV+
Sbjct: 61 VAVTKADEVAWDHIKPAILGAIMEHYQSGAPVLEGEQAAS------GHASHDGPDEDVVR 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVLEVRPV 184
>gi|146278315|ref|YP_001168474.1| NifU domain-containing protein [Rhodobacter sphaeroides ATCC 17025]
gi|145556556|gb|ABP71169.1| nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides ATCC
17025]
Length = 186
Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats.
Identities = 101/190 (53%), Positives = 133/190 (70%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ+VL G F++A+ A SPLA RIF G+ASV+FG DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQMVLEAGTADFASAEAAATSPLARRIFGAGGVASVFFGTDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I V K D+ W+H++P +LG IMEH+ SG P++ G D +V+
Sbjct: 61 IAVTKEDEVVWDHVKPAILGAIMEHYQSGAPVLEGEQAAS------GHATHDGPDEEIVR 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA+DGGDI F G+ GIV+L M+GAC+GCPS++ TLK G+ N+L H+
Sbjct: 115 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVLEVRPV 184
>gi|297847512|ref|XP_002891637.1| hypothetical protein ARALYDRAFT_892107 [Arabidopsis lyrata subsp.
lyrata]
gi|297337479|gb|EFH67896.1| hypothetical protein ARALYDRAFT_892107 [Arabidopsis lyrata subsp.
lyrata]
Length = 274
Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 119/191 (62%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+T+ TPNP++L F PG+ V+ G+ F N++ A SPLA IF+I G+ V+FG DF
Sbjct: 74 MFIETQSTPNPSSLMFNPGKPVMDIGSADFPNSRSAMGSPLAKAIFAIDGVVRVFFGSDF 133
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D W+ L+P + ++M+ + SG P+ + K E DS V
Sbjct: 134 VTVTKSDDVTWDILKPDIFAVVMDFYSSGQPLFLDSQATAAK-----DTAIHEDDSETVA 188
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RP+V DGGDI + G+ GIV L M+GACSGCPS+S TLK G+ N+L
Sbjct: 189 MIKELLETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLM 248
Query: 178 HFVPEVKDIRT 188
H+V EVK +
Sbjct: 249 HYVSEVKGVEQ 259
>gi|299755866|ref|XP_001828936.2| NifU-like protein c [Coprinopsis cinerea okayama7#130]
gi|298411416|gb|EAU92943.2| NifU-like protein c [Coprinopsis cinerea okayama7#130]
Length = 291
Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats.
Identities = 84/192 (43%), Positives = 120/192 (62%), Gaps = 5/192 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPN +LKFIPG V+ EG+ F + + A SPLA R+ I GI V++G DF
Sbjct: 66 MFIQTESTPNEDSLKFIPGVPVMEEGSAEFLDTRSALASPLALRLMGIEGITGVFYGPDF 125
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + W ++P V ++ME F SG P+ + D + +++DS V
Sbjct: 126 VTVSKSSDHPWAVVKPEVYALLMEFFSSGQPLFRSEE--DREAAGPQDTRILDTDSETVA 183
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ RVRPA+ DGGDI ++G+ DGIV + ++G+C GC S+S TLK G+ +L
Sbjct: 184 MIKELLETRVRPAIMEDGGDIEYRGFDENDGIVRVKLKGSCRGCESSSVTLKSGIERMLM 243
Query: 178 HFVPEVKDIRTV 189
H+VPEVK + +
Sbjct: 244 HYVPEVKGVEQI 255
>gi|157167461|ref|XP_001654807.1| hypothetical protein AaeL_AAEL002148 [Aedes aegypti]
gi|108882432|gb|EAT46657.1| conserved hypothetical protein [Aedes aegypti]
Length = 263
Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 120/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G + F A SPLA +F I G+ SV+FG D
Sbjct: 55 MFIQTQDTPNPDSLKFLPGVAVLEKGQTMDFPTQAAALCSPLAKLLFRIEGVRSVFFGAD 114
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+T+ K ++ +W ++P V +IM+ F SG P++ + MG E D V
Sbjct: 115 FVTISKHEEAEWRLIKPEVFAVIMDFFASGLPVVTDAKP-------MGDTQINEDDDETV 167
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
Q IKE+LD+++RP V DGGDI+F + DG+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 168 QMIKELLDSKIRPTVQEDGGDIIFMAFEDGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 227
Query: 179 FVPEVKDIRTV 189
++PEV + V
Sbjct: 228 YIPEVVAVEQV 238
>gi|288959669|ref|YP_003450010.1| thioredoxin [Azospirillum sp. B510]
gi|288911977|dbj|BAI73466.1| thioredoxin [Azospirillum sp. B510]
Length = 185
Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats.
Identities = 93/190 (48%), Positives = 130/190 (68%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL G F+ ++A SPLA R+F I G+ V+ G DF
Sbjct: 1 MFIQTEQTPNPATLKFLPGRDVLGRGTADFTGREDAARSPLAQRLFEIEGVVGVFLGADF 60
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
IT+ K DW L+P +LG+IMEHF + P++ G + +V+
Sbjct: 61 ITITKTDARDWFLLKPSILGVIMEHFTADRPVLLEEGGDGHAAAASADDEE------IVE 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRP+VA+DGGDI F+G+ G+V+L+M+GACSGCPS++ TLK+G+ N+L H+
Sbjct: 115 QIKELLDTRVRPSVAQDGGDITFQGFERGVVYLAMKGACSGCPSSTATLKHGIENMLRHY 174
Query: 180 VPEVKDIRTV 189
+PEV ++R V
Sbjct: 175 IPEVVEVRAV 184
>gi|164657977|ref|XP_001730114.1| hypothetical protein MGL_2496 [Malassezia globosa CBS 7966]
gi|159104009|gb|EDP42900.1| hypothetical protein MGL_2496 [Malassezia globosa CBS 7966]
Length = 276
Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats.
Identities = 78/193 (40%), Positives = 119/193 (61%), Gaps = 8/193 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPN +LKF+PG V+ +G F + + + SPLA +F++ G++ V++G DF
Sbjct: 56 MFIQTESTPNEDSLKFLPGCRVMEKGTAEFLDQRSSMTSPLAKDLFALDGVSGVFYGPDF 115
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD W ++P V +ME F +G + + D +++DS VV
Sbjct: 116 VTVTKDTDTPWSAIKPEVYSTMMEFFTAGHSLFPDPSSAQPGSD----TTILDTDSEVVA 171
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY---RDGIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+LD RVRPA+ DGGD+ ++G+ DGIV + ++G+C GC S++ TLK G+ +L
Sbjct: 172 MIKELLDTRVRPAIQEDGGDLEYRGFGEDSDGIVRVKLKGSCRGCDSSTVTLKSGIERML 231
Query: 177 NHFVPEVKDIRTV 189
H+VPEV+ + V
Sbjct: 232 MHYVPEVQGVEQV 244
>gi|67633331|gb|AAY78582.1| predicted thioredoxin-like protein [uncultured bacterium
MedeBAC82F10]
Length = 185
Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats.
Identities = 97/190 (51%), Positives = 131/190 (68%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MF+QTE TPNPATLKF+PG+ V+ EG I F N A SPLA +F+I G+ SV+FG DF
Sbjct: 1 MFVQTEPTPNPATLKFLPGREVMKEGTIFFQNQDSAVNSPLAQNLFNIKGVESVFFGSDF 60
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
IT+ K + +W ++P +LG I+EHF P+I + E+DS VV+
Sbjct: 61 ITITKAEANEWTLMKPAILGCIIEHFTMNKPVISKQAP-------RTEHTYDENDSDVVK 113
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD +VRPAVA DGGDI+F Y +GIVFL M+GAC GCPS++ TLK G+ N+L H+
Sbjct: 114 KIKELLDTKVRPAVAMDGGDIIFDKYNEGIVFLQMQGACQGCPSSTATLKMGIENMLKHY 173
Query: 180 VPEVKDIRTV 189
+PEV+++R V
Sbjct: 174 IPEVREVRPV 183
>gi|158288625|ref|XP_310479.4| AGAP000598-PA [Anopheles gambiae str. PEST]
gi|157018658|gb|EAA06366.4| AGAP000598-PA [Anopheles gambiae str. PEST]
Length = 226
Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 120/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL +G + F + A+ SPLA +F + G+ +V+FG D
Sbjct: 11 MFIQTQDTPNPDSLKFLPGVPVLEKGQTMDFPSVSAAQCSPLAKLLFRVEGVRAVFFGGD 70
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+T+ K + +W ++P V +IM+ F SG P++ + F E D V
Sbjct: 71 FVTISKQEDAEWRIIKPEVFAVIMDFFASGLPVVTDAKPN-------PDTQFNEDDDETV 123
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
Q IKE+LD R+RP V DGGDI+F G+ DG+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 124 QMIKELLDTRIRPTVQEDGGDIIFMGFDDGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 183
Query: 179 FVPEVKDIRTV 189
++PEV + V
Sbjct: 184 YIPEVVSVEQV 194
>gi|224097626|ref|XP_002311017.1| predicted protein [Populus trichocarpa]
gi|222850837|gb|EEE88384.1| predicted protein [Populus trichocarpa]
Length = 198
Score = 263 bits (673), Expect = 9e-69, Method: Composition-based stats.
Identities = 89/191 (46%), Positives = 120/191 (62%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F PG+ ++ G+ F NA+ A SPLA I+ I GI V+FG DF
Sbjct: 4 MFIQTQSTPNPLSLMFHPGKPIMDVGSADFPNARSAMNSPLAKSIYEIDGITRVFFGSDF 63
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D WE L P + IM+ + SG+P+ + K E DS V
Sbjct: 64 VTVTKSDDASWEFLEPEIFAAIMDFYSSGEPLFQDSKTASAK-----DTAISEDDSETVT 118
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ + G+V L+M+GACSGCPS+S TLK G+ N+L
Sbjct: 119 MIKELLETRIRPAVQDDGGDIEYRGFDEETGVVKLTMQGACSGCPSSSVTLKSGIENMLM 178
Query: 178 HFVPEVKDIRT 188
H+VPEVK +
Sbjct: 179 HYVPEVKGVEQ 189
>gi|304393809|ref|ZP_07375734.1| putative NFU1 iron-sulfur cluster scaffold-like protein [Ahrensia
sp. R2A130]
gi|303294008|gb|EFL88383.1| putative NFU1 iron-sulfur cluster scaffold-like protein [Ahrensia
sp. R2A130]
Length = 190
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 102/191 (53%), Positives = 140/191 (73%), Gaps = 4/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PGQ V G FS+A +AE SPLA+ +F+IP ++ V+FGYD
Sbjct: 1 MFIQTEATPNPATLKFLPGQTVAENGPFEFSDAVDAEDRSPLAAGLFAIPSVSGVFFGYD 60
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+T+ K D DW+H++P VLG+IMEHF+SG P+++ G ++ G E +V
Sbjct: 61 FVTITKNDTADWQHVKPAVLGVIMEHFMSGAPVMNADAAGGTEV--APEGFVEEGSEEIV 118
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+L+ RVRPAVA+DGGDI F G++DG V+L MRGAC+GCPS++ TL++G+ N+L H
Sbjct: 119 STIKELLETRVRPAVAQDGGDITFHGFKDGRVYLKMRGACAGCPSSTATLQHGIQNLLKH 178
Query: 179 FVPEVKDIRTV 189
F+PEV+ + V
Sbjct: 179 FIPEVEAVEAV 189
>gi|91974729|ref|YP_567388.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris BisB5]
gi|91681185|gb|ABE37487.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris BisB5]
Length = 188
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 97/180 (53%), Positives = 138/180 (76%), Gaps = 3/180 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKFIPG+VVL G + F++ K+A SPLA R+F + G++ V++G DF
Sbjct: 1 MFIQTEPTPNPATLKFIPGRVVLDSGTMEFTDRKQAARSPLAERLFEVEGVSGVFYGSDF 60
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD DW+HL+P +LG IMEH++SG PI+ +G + + D+ F E D+ V+
Sbjct: 61 VTVTKDGAGDWQHLKPAILGAIMEHYMSGAPIMADGRVDGDETDE--DEFFAERDAETVE 118
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IK++++ RVRPAVA DGGDI F+G++DG+V+L+M+GACSGCPS++ TL++G+ N+L HF
Sbjct: 119 IIKDLIETRVRPAVANDGGDITFRGFKDGVVYLAMKGACSGCPSSTATLQHGIQNLLKHF 178
>gi|119496847|ref|XP_001265197.1| NifU-related protein [Neosartorya fischeri NRRL 181]
gi|119413359|gb|EAW23300.1| NifU-related protein [Neosartorya fischeri NRRL 181]
Length = 326
Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 119/201 (59%), Gaps = 12/201 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE+TPNP LKFIP VL E + + + + SPLA+ +F++ G+
Sbjct: 85 IFIQTENTPNPDALKFIPNHRVLPEDFPTSFLEYLSPRSTLAPPHPSPLAANLFNVDGVT 144
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD-- 109
SV++G DFITV K +W H++P V +I + SG+ I++ + G +
Sbjct: 145 SVFYGPDFITVSKSSDANWAHIKPEVFSLITQAVTSGEAIVNTVEKTGEHAQEGGEEESL 204
Query: 110 -FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
F E D VV IKE+L+ R+RPA+ DGGDI +G+ +GIV L +RGAC C S++ TL
Sbjct: 205 SFNEEDDEVVSMIKELLETRIRPAIQEDGGDIELRGFENGIVKLKLRGACRTCDSSTVTL 264
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ ++L H++ EV+ + V
Sbjct: 265 KNGIESMLMHYIEEVQGVEQV 285
>gi|319405374|emb|CBI78993.1| NifU-related protein [Bartonella sp. AR 15-3]
Length = 190
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 101/189 (53%), Positives = 140/189 (74%), Gaps = 7/189 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYD 59
MFIQTE+TPNP TLKF+PG++VL +G + F N +EA + SPLA+++F+IP I SV+ GYD
Sbjct: 1 MFIQTENTPNPTTLKFLPGRIVLSQGVLEFHNREEAAKNSPLAAKLFNIPNIKSVFLGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
FIT+ K+ +W+HL+P +LG IMEHF+S DP+I ++ F E D+ +V
Sbjct: 61 FITITKNDGEWKHLKPAILGTIMEHFLSNDPVITT------EVHISDKEFFDEKDTDIVV 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA DGGDI F G+ +GIV+L+MRGAC+GCPS++ TLK+G+ N+L HF
Sbjct: 115 VIKELLETRVRPAVANDGGDITFCGFANGIVYLNMRGACAGCPSSTATLKHGIENLLRHF 174
Query: 180 VPEVKDIRT 188
+PEV +
Sbjct: 175 IPEVLGVEA 183
>gi|121702857|ref|XP_001269693.1| NifU-related protein [Aspergillus clavatus NRRL 1]
gi|119397836|gb|EAW08267.1| NifU-related protein [Aspergillus clavatus NRRL 1]
Length = 320
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 119/201 (59%), Gaps = 12/201 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE+TPNP LKFIP VL E + + + + SPLA+ +F++ G+
Sbjct: 79 IFIQTENTPNPDALKFIPNHRVLPEEFPTSFLEYLSPRSTLAPPHPSPLAANLFNVEGVT 138
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD-- 109
SV++G DFITV K +W H++P V +I + SG+ I++ + G D
Sbjct: 139 SVFYGPDFITVTKSSDANWAHIKPEVFSLITQAVTSGETIVNTVEKSGEHAQEGGEQDSL 198
Query: 110 -FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
F E D V+ IKE+L+ R+RPA+ DGGDI +G+ +GIV L +RGAC C S++ TL
Sbjct: 199 SFNEEDDEVIGMIKELLETRIRPAIQEDGGDIELRGFENGIVKLKLRGACRTCDSSTVTL 258
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ ++L H++ EV+ + V
Sbjct: 259 KNGIESMLMHYIEEVQGVEQV 279
>gi|220924300|ref|YP_002499602.1| Scaffold protein Nfu/NifU [Methylobacterium nodulans ORS 2060]
gi|219948907|gb|ACL59299.1| Scaffold protein Nfu/NifU [Methylobacterium nodulans ORS 2060]
Length = 187
Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats.
Identities = 101/191 (52%), Positives = 140/191 (73%), Gaps = 6/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP TLKF+PG+VVL EG + +A SPLA +F++PG+A VYFG+DF
Sbjct: 1 MFIQTEATPNPTTLKFLPGRVVLTEGTFEARSPDQAARSPLAQALFAVPGVAGVYFGHDF 60
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
I+V K D +W ++P VLG IMEHF+SG P++ G G+ ++ F E+D+ V
Sbjct: 61 ISVTKAEDGPEWPQVKPAVLGAIMEHFLSGAPVLEAGAAGEGTSEE----FFEEADADTV 116
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IK++L+ RVRPAVA DGGDI F+GYR+G+V+L M+GACSGCPS++ TL+ GV N+ H
Sbjct: 117 ATIKDLLETRVRPAVAGDGGDITFRGYREGVVYLEMKGACSGCPSSTATLRQGVQNLFRH 176
Query: 179 FVPEVKDIRTV 189
F+PEV+++++V
Sbjct: 177 FLPEVREVQSV 187
>gi|312113945|ref|YP_004011541.1| Scaffold protein Nfu/NifU [Rhodomicrobium vannielii ATCC 17100]
gi|311219074|gb|ADP70442.1| Scaffold protein Nfu/NifU [Rhodomicrobium vannielii ATCC 17100]
Length = 184
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 103/190 (54%), Positives = 139/190 (73%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+ VL EG F + +AE SPLA+R+F + G+ +V+ G D
Sbjct: 1 MFIQTEMTPNPATLKFLPGRTVLEEGTREFLTSDDAEGVSPLAARLFEVEGVTAVFLGSD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
F++V KD+ DWE L+PPVLG+IMEHF+SG P++ + D + VV
Sbjct: 61 FVSVTKDRGDWESLKPPVLGVIMEHFMSGQPVLSDERHVAEDEDFDDADK------EVVT 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ RVRPAVA DGGDI FKG+RDG+V+L M+GACSGCPSA+ TL++G+ N+L HF
Sbjct: 115 TIKELIETRVRPAVANDGGDITFKGFRDGVVYLKMQGACSGCPSATATLRHGIENLLKHF 174
Query: 180 VPEVKDIRTV 189
VPEV++++ V
Sbjct: 175 VPEVQEVQPV 184
>gi|16124317|ref|NP_418881.1| NifU-like domain-containing protein [Caulobacter crescentus CB15]
gi|13421157|gb|AAK22049.1| NifU-like domain protein [Caulobacter crescentus CB15]
Length = 224
Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats.
Identities = 96/191 (50%), Positives = 127/191 (66%), Gaps = 6/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF+PG+ VL +GA F +E + SPLA +F + ++ V+FG DF
Sbjct: 35 MFIQTETTPNPEVLKFLPGREVLGDGAREFRTPEEGDASPLAKALFELGDVSRVFFGPDF 94
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + W HL+ P+L IM+HF SG P++ + D+ GD+ E S +V
Sbjct: 95 LTVTKGEDAQWPHLKAPILAAIMDHFTSGRPLLLDQTAESGGHDE---GDYDEETSQIVA 151
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+LD R+RPAVA+DGGDIVF + G+V+L MRGACSGCPS+S TLK GV N+L
Sbjct: 152 EIKELLDTRIRPAVAQDGGDIVFSRFEPQTGVVWLHMRGACSGCPSSSATLKSGVENMLK 211
Query: 178 HFVPEVKDIRT 188
H+VPEV +
Sbjct: 212 HYVPEVTRVEQ 222
>gi|103487552|ref|YP_617113.1| nitrogen-fixing NifU-like protein [Sphingopyxis alaskensis RB2256]
gi|98977629|gb|ABF53780.1| nitrogen-fixing NifU-like protein [Sphingopyxis alaskensis RB2256]
Length = 190
Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats.
Identities = 86/190 (45%), Positives = 132/190 (69%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M I+TE TPNPATLKF+PG+ V+ G F++A+EAE SPLAS +FS+ + V+FG DF
Sbjct: 1 MLIETESTPNPATLKFLPGRTVMETGTRDFASAEEAEASPLASALFSLGDVTGVFFGRDF 60
Query: 61 ITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
++V +W ++P VLG++M+HF++G P+ + G + +D+ +++
Sbjct: 61 VSVTIAPGAEWADVKPDVLGIVMDHFLAGVPLFNAASAGSAVPPEDAGFADDPADADIIE 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+++ RVRPAVA DGGDIV++G+ G V+L M+GAC+GCPS++ TLK G+ ++L H+
Sbjct: 121 QIKELIETRVRPAVANDGGDIVYRGFDKGNVYLKMQGACAGCPSSTATLKNGIESLLKHY 180
Query: 180 VPEVKDIRTV 189
VPEV + V
Sbjct: 181 VPEVTAVHAV 190
>gi|4680705|gb|AAD27742.1|AF132967_1 CGI-33 protein [Homo sapiens]
Length = 231
Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats.
Identities = 84/192 (43%), Positives = 116/192 (60%), Gaps = 11/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYF-GYD 59
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+F
Sbjct: 35 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFWDQI 94
Query: 60 FITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FITV K+ + DW L+P + IM+ F SG P++ E D V
Sbjct: 95 FITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPPGEAG--------SEEDDEV 146
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 147 VAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQ 206
Query: 178 HFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 207 FYIPEVEGVEQV 218
>gi|75674208|ref|YP_316629.1| nitrogen-fixing NifU [Nitrobacter winogradskyi Nb-255]
gi|74419078|gb|ABA03277.1| nitrogen-fixing NifU [Nitrobacter winogradskyi Nb-255]
Length = 190
Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats.
Identities = 93/180 (51%), Positives = 134/180 (74%), Gaps = 1/180 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL +G + F++A SPLA ++F++ G+A V++G DF
Sbjct: 1 MFIQTEITPNPATLKFLPGRTVLGKGTMEFTSASTTARSPLAVKLFAVHGVAGVFYGSDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV KD+ DW+HL+P +LG+IMEH+++G P++ +G D F E+D+ V
Sbjct: 61 ITVTKDEGSDWQHLKPAILGVIMEHYMAGAPLLADGEGCSEANADSDVEFFDEADAETVT 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IK++++ RVRP VA DGGDI F+G+RDGIV+++M+GACSGCPS++ TL+ G+ N+L HF
Sbjct: 121 LIKDLIETRVRPGVADDGGDITFRGFRDGIVYVNMKGACSGCPSSTVTLRNGIQNLLKHF 180
>gi|307108001|gb|EFN56242.1| hypothetical protein CHLNCDRAFT_48753 [Chlorella variabilis]
Length = 209
Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats.
Identities = 90/191 (47%), Positives = 125/191 (65%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNPA+L FIPGQ VL G+ F++A+EA SPLA ++F+I G+ V+FG DF
Sbjct: 1 MFIQTQPTPNPASLMFIPGQKVLEGGSKSFTSAREAMASPLAKKLFAIDGVTQVFFGSDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + Y W L+P V IM+H+ SG+ + ++ + E D VV
Sbjct: 61 VTVTKSEDYGWAVLKPDVFAAIMDHYSSGEALFYDE-----QDTGAAEHMIHEDDDEVVA 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDIVF+ + G+V L M GACSGCPS++ TLK G+ N+L
Sbjct: 116 MIKELLETRIRPAVQEDGGDIVFRTWDPESGVVKLKMMGACSGCPSSAVTLKSGIENMLM 175
Query: 178 HFVPEVKDIRT 188
H++PEV+ +
Sbjct: 176 HYIPEVRGVEE 186
>gi|118403546|ref|NP_001072356.1| NFU1 iron-sulfur cluster scaffold homolog [Xenopus (Silurana)
tropicalis]
gi|111307911|gb|AAI21453.1| HIRA interacting protein 5 [Xenopus (Silurana) tropicalis]
Length = 199
Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats.
Identities = 82/191 (42%), Positives = 119/191 (62%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP ++KFIPG+ VL + F + A SPLA +F I G+ SV+ G DF
Sbjct: 1 MFIQTQDTPNPNSVKFIPGRAVLDARTMDFPSPASAFCSPLARHLFRIDGVKSVFLGPDF 60
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K ++ DW ++P + IM+ F SG P++ G E + VV
Sbjct: 61 ITITKNSEELDWNLIKPDIYATIMDFFASGLPVVTEDAP-------RGDAAASEEEDEVV 113
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD+++KG++DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 114 AMIKELLDTRIRPTVQEDGGDVLYKGFQDGIVQLKLQGSCTSCPSSIITLKSGIQNMLQF 173
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 174 YIPEVEGVEQV 184
>gi|294085162|ref|YP_003551922.1| nitrogen-fixing NifU domain-containing protein [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292664737|gb|ADE39838.1| nitrogen-fixing NifU domain protein [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 187
Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats.
Identities = 96/189 (50%), Positives = 125/189 (66%), Gaps = 6/189 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNPATLKFIPG VL +G F A A SP+A R+F + G+A V+ G DF
Sbjct: 1 MFIQTQDTPNPATLKFIPGVPVLEQGTADFPAADSAGSSPMARRLFQVDGVAGVFLGGDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I V K D+ DW L+P +L IMEHF SG P+I + + D V+
Sbjct: 61 IAVTKVDEMDWFALKPSILAGIMEHFASGLPVIEDNAGNMTDANTDDDEDDDT-----VK 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK +LD RVRPAVA DGGDIVF+ + DG+V L MRGAC GCPS++ TLK G+ N+L H+
Sbjct: 116 QIKHLLDTRVRPAVAMDGGDIVFQDFDDGVVTLQMRGACQGCPSSTATLKMGIENMLKHY 175
Query: 180 VPEVKDIRT 188
+P+V+++R
Sbjct: 176 IPQVREVRA 184
>gi|197106919|ref|YP_002132296.1| thioredoxin-like protein [Phenylobacterium zucineum HLK1]
gi|196480339|gb|ACG79867.1| thioredoxin-like protein [Phenylobacterium zucineum HLK1]
Length = 191
Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats.
Identities = 98/191 (51%), Positives = 129/191 (67%), Gaps = 6/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF+PG+ VL EG F + +EA+ SPLA+ IF I G+ V+FG DF
Sbjct: 1 MFIQTEATPNPEVLKFLPGRAVLGEGTRDFGSMEEAQASPLAADIFDIEGVTRVFFGPDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TVGK +DW HL+ PVL IM+HF SG P+ G D+ G + + +V
Sbjct: 61 LTVGKHPSFDWPHLKAPVLAAIMDHFTSGRPLFAEAGEQAGGHDE---GAYEGETAQIVA 117
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILN 177
IK++LD R+RPAVA+DGGDI+F + G+V+L+MRGACSGCPS++ TLK GV N+L
Sbjct: 118 EIKDLLDTRIRPAVAQDGGDILFHKFEPDTGVVWLNMRGACSGCPSSTATLKAGVENMLK 177
Query: 178 HFVPEVKDIRT 188
H+VPEV +
Sbjct: 178 HYVPEVTRVEQ 188
>gi|242802633|ref|XP_002484010.1| NifU-related protein [Talaromyces stipitatus ATCC 10500]
gi|218717355|gb|EED16776.1| NifU-related protein [Talaromyces stipitatus ATCC 10500]
Length = 321
Score = 260 bits (664), Expect = 9e-68, Method: Composition-based stats.
Identities = 80/203 (39%), Positives = 121/203 (59%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE TPNP LKF+P VL E + + + + SPLA+++ ++ G++
Sbjct: 81 IFIQTESTPNPDALKFLPNHRVLPENFPTPFLEYLSPRSTLAPPHPSPLAAKLLNVEGVS 140
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG--- 108
SV++G DFITV K +W H++P V +I E SG+PI++ D G
Sbjct: 141 SVFYGPDFITVTKQSDVNWAHIKPEVFSLITEVVTSGEPIVNTVERTSGAQDAQEGGGED 200
Query: 109 --DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ E D VV IKE+L+ R+RPA+ DGGDI F+G+ +GIV L +RGAC C S++
Sbjct: 201 TLSYNEEDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFENGIVLLKLRGACRTCDSSTV 260
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ ++L H++ EV+ ++ V
Sbjct: 261 TLKNGIESMLMHYIEEVQGVQQV 283
>gi|92115649|ref|YP_575378.1| nitrogen-fixing NifU-like [Nitrobacter hamburgensis X14]
gi|91798543|gb|ABE60918.1| nitrogen-fixing NifU-like protein [Nitrobacter hamburgensis X14]
Length = 191
Score = 260 bits (664), Expect = 9e-68, Method: Composition-based stats.
Identities = 91/181 (50%), Positives = 131/181 (72%), Gaps = 2/181 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL +G + F+ A S LA R+F++ G+ V++G DF
Sbjct: 1 MFIQTEVTPNPATLKFLPGRTVLGKGTMEFNGPDTAGRSQLAVRLFAVHGVTGVFYGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLG--DMKLDDMGSGDFIESDSAVV 118
ITV KD DW+HL+P +LG+IMEH++SG P++ +G D D F E+D+ V
Sbjct: 61 ITVTKDASDWQHLKPAILGVIMEHYMSGAPLLADGETAGNDEANKDEAVEFFDEADAETV 120
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IK++++ RVRP VA DGGDI F+G++DG+V+++M+G+CSGCPS++ TL+ G+ N+L H
Sbjct: 121 TLIKDLIETRVRPGVADDGGDITFRGFKDGVVYVNMKGSCSGCPSSTVTLRNGIQNLLKH 180
Query: 179 F 179
F
Sbjct: 181 F 181
>gi|323138525|ref|ZP_08073593.1| Scaffold protein Nfu/NifU [Methylocystis sp. ATCC 49242]
gi|322396159|gb|EFX98692.1| Scaffold protein Nfu/NifU [Methylocystis sp. ATCC 49242]
Length = 187
Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats.
Identities = 98/188 (52%), Positives = 138/188 (73%), Gaps = 2/188 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL +GA+ F + A +PLA + +I G+ +V +G DF
Sbjct: 1 MFIQTETTPNPATLKFLPGQDVLGQGAMEFRSPDAAANAPLAQALLAIDGVQAVMYGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
++V KD DW HL+P +LG IMEHF SG P++ G G + +D + SD+ V
Sbjct: 61 VSVTKDGADWAHLKPAILGTIMEHFASGAPLLTEGAAGAQQHEDGE--FYDPSDAETVAT 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+++ RVRPAVA DGGDIVF+G+RDG+V+L+M+GACSGCPS++ TL+ G+ N+L HF+
Sbjct: 119 IKELIETRVRPAVAGDGGDIVFRGFRDGVVYLTMKGACSGCPSSTATLRNGIENLLRHFL 178
Query: 181 PEVKDIRT 188
P++K +++
Sbjct: 179 PQIKAVQS 186
>gi|221232999|ref|YP_002515435.1| mitochondrial-type Fe-S cluster assembly protein NFU [Caulobacter
crescentus NA1000]
gi|220962171|gb|ACL93527.1| mitochondrial-type Fe-S cluster assembly protein NFU [Caulobacter
crescentus NA1000]
Length = 190
Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats.
Identities = 96/191 (50%), Positives = 127/191 (66%), Gaps = 6/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF+PG+ VL +GA F +E + SPLA +F + ++ V+FG DF
Sbjct: 1 MFIQTETTPNPEVLKFLPGREVLGDGAREFRTPEEGDASPLAKALFELGDVSRVFFGPDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + W HL+ P+L IM+HF SG P++ + D+ GD+ E S +V
Sbjct: 61 LTVTKGEDAQWPHLKAPILAAIMDHFTSGRPLLLDQTAESGGHDE---GDYDEETSQIVA 117
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+LD R+RPAVA+DGGDIVF + G+V+L MRGACSGCPS+S TLK GV N+L
Sbjct: 118 EIKELLDTRIRPAVAQDGGDIVFSRFEPQTGVVWLHMRGACSGCPSSSATLKSGVENMLK 177
Query: 178 HFVPEVKDIRT 188
H+VPEV +
Sbjct: 178 HYVPEVTRVEQ 188
>gi|332188730|ref|ZP_08390443.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. S17]
gi|332011236|gb|EGI53328.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. S17]
Length = 190
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 84/190 (44%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M I+TE TPNPATLKF+PG+ V+ G F++ +EA SPLA IF++ + V+FG DF
Sbjct: 1 MLIETEPTPNPATLKFLPGRKVMDSGTRDFASPEEAAASPLAEAIFNLGDVTGVFFGRDF 60
Query: 61 ITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
++V DW ++P VLG++++HF + P+ G + + D+ +V
Sbjct: 61 VSVTIAPGVDWSDVKPDVLGILLDHFSAQMPLFKQGAADFAVPAEEETFADNPEDADIVA 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+I+E++D RVRPAVA DGGDIV++G+ G V+L M+GAC+GCPS++ TLK G+ +L H+
Sbjct: 121 QIRELIDTRVRPAVANDGGDIVYRGFDKGKVYLKMQGACAGCPSSTATLKNGIEQLLRHY 180
Query: 180 VPEVKDIRTV 189
VPEV ++R V
Sbjct: 181 VPEVTEVRAV 190
>gi|188582635|ref|YP_001926080.1| Scaffold protein Nfu/NifU [Methylobacterium populi BJ001]
gi|179346133|gb|ACB81545.1| Scaffold protein Nfu/NifU [Methylobacterium populi BJ001]
Length = 188
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 101/191 (52%), Positives = 136/191 (71%), Gaps = 5/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL EG +A AE SPLA+ +FS+PG++ VYFG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRVVLPEGTFEARDAAGAERSPLATALFSVPGVSGVYFGHDF 60
Query: 61 ITVGKDQY--DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
I+V K +W ++P VLG IM+HF SG P++ G +D + E+D V
Sbjct: 61 ISVTKADGVNEWPQVKPAVLGAIMDHFQSGRPVLAEGT---ALAEDETEEFYDEADHDTV 117
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IK++L+ RVRPAVA DGGDI F+GYRDGIV+L M+GACSGCPS++ TL+ GV N+ H
Sbjct: 118 ATIKDLLETRVRPAVAGDGGDITFRGYRDGIVYLEMKGACSGCPSSTATLRQGVQNLFRH 177
Query: 179 FVPEVKDIRTV 189
F+P V++++ +
Sbjct: 178 FLPSVREVQAI 188
>gi|255088633|ref|XP_002506239.1| predicted protein [Micromonas sp. RCC299]
gi|226521510|gb|ACO67497.1| predicted protein [Micromonas sp. RCC299]
Length = 298
Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 90/187 (48%), Positives = 125/187 (66%), Gaps = 9/187 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT+ TPNPA+L F+PG+ V EG +F+N +E SPLA ++F I G+ SV+FG D
Sbjct: 94 IFIQTQTTPNPASLMFMPGKPVYEEGGTKNFANPREGMASPLAKKLFLIDGVTSVFFGQD 153
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+TV K ++++W L+P V IM+++ SG+PII + E D +V
Sbjct: 154 FVTVTKSEEHEWGTLKPEVFAAIMDYYASGEPIITDEAEL-----ANAGTAITEDDDEIV 208
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+L+ R+RPAVA DGGDIVFKG+ G+V + M+GAC GCPS+S TLK G+ N+L
Sbjct: 209 AMIKELLETRIRPAVAEDGGDIVFKGWNADTGVVTVKMQGACDGCPSSSVTLKSGIENML 268
Query: 177 NHFVPEV 183
H+VPEV
Sbjct: 269 RHYVPEV 275
>gi|312384995|gb|EFR29592.1| hypothetical protein AND_01304 [Anopheles darlingi]
Length = 214
Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 118/191 (61%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKF+PG VL G + F N A+ SPLA +F I G+ SV+FG D
Sbjct: 1 MFIQTQDTPNPHSLKFLPGVTVLDAGQTMDFPNVSSAQCSPLAKLLFRIEGVRSVFFGAD 60
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+T+ K + +W ++P +IM+ F SG P++ + S E D V
Sbjct: 61 FVTISKVEDAEWSIIKPETFAVIMDFFASGLPVVTGANPNN-------STQINEDDDETV 113
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
Q IKE+LD R+RP V DGGDI+F G+ DG+V L M+G+CS CPS+ TLK GV N+L
Sbjct: 114 QMIKELLDTRIRPTVQEDGGDIIFMGFDDGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 173
Query: 179 FVPEVKDIRTV 189
++PEV + V
Sbjct: 174 YIPEVVSVEQV 184
>gi|238486392|ref|XP_002374434.1| NifU-related protein [Aspergillus flavus NRRL3357]
gi|317144282|ref|XP_003189583.1| nifU-related protein [Aspergillus oryzae RIB40]
gi|220699313|gb|EED55652.1| NifU-related protein [Aspergillus flavus NRRL3357]
Length = 329
Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 77/201 (38%), Positives = 120/201 (59%), Gaps = 12/201 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE+TPNP LKFIP VL E + + + + SPLA+ +F++ G+
Sbjct: 88 IFIQTENTPNPDALKFIPNHRVLPEDFPTSFLEYLSPRSTLAPPHPSPLAANLFNVDGVT 147
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD-- 109
S++FG +FITV K +W H++P + +I + SG+PI++ + G +
Sbjct: 148 SIFFGPEFITVTKASDANWAHIKPEIFSLITQAVTSGEPIVNTVAKSGENAQEGGEEESL 207
Query: 110 -FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+ E D VV IKE+L+ R+RPA+ DGGDI +G+ +GIV L +RGAC C S++ TL
Sbjct: 208 SYNEEDDEVVSMIKELLETRIRPAIQEDGGDIELRGFENGIVMLKLRGACRTCDSSTVTL 267
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ ++L H++ EV+ + V
Sbjct: 268 KNGIESMLMHYIEEVQGVEQV 288
>gi|213512278|ref|NP_001134266.1| NFU1 iron-sulfur cluster scaffold homolog [Salmo salar]
gi|209731958|gb|ACI66848.1| NFU1 iron-sulfur cluster scaffold homolog [Salmo salar]
Length = 263
Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats.
Identities = 83/189 (43%), Positives = 115/189 (60%), Gaps = 10/189 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
IQT+DTPNP +LKFIPG+ VL G + F + AE S LA +F I G+ SV++G DFIT
Sbjct: 61 IQTQDTPNPRSLKFIPGKPVLGVGTLDFPSPSSAECSSLARDLFGIEGVKSVFYGPDFIT 120
Query: 63 VGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
V K D +W ++ + I + F SGDPI + E D +V
Sbjct: 121 VTKADDDVEWTDIKHHAMDAITKFFDSGDPITTGVTHHESS--------HSEDDDEIVSM 172
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+LD R+RP V DGGD++FKG+ +G V L + G+C+GCPS++ TLK G+ N+L ++
Sbjct: 173 IKELLDTRIRPTVMEDGGDVIFKGFENGTVKLKLVGSCTGCPSSTVTLKNGIQNMLQFYI 232
Query: 181 PEVKDIRTV 189
PEV D+ V
Sbjct: 233 PEVDDVEQV 241
>gi|115953358|ref|XP_798698.2| PREDICTED: similar to HIRA interacting protein 5, partial
[Strongylocentrotus purpuratus]
Length = 211
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 87/192 (45%), Positives = 117/192 (60%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKF+PG VL G F +A A SPLA ++F I G+ V+FG DF
Sbjct: 3 MFIQTQDTPNPNSLKFLPGVEVLGTGTKDFPSAMNAHGSPLARQLFRIEGVQGVFFGPDF 62
Query: 61 ITVGK---DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
ITV K D DW L+P + +M+ F +G PI+ + + E D
Sbjct: 63 ITVTKMDDDNIDWRVLKPEIYATVMDFFATGVPILTDE-------TAPTDTEIQEDDDET 115
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD R+RP V DGGDIV+ G+ +G+V L ++GAC+ CPS+ TLK+GV N+L
Sbjct: 116 VMMIKELLDTRIRPTVQEDGGDIVYMGFEEGVVKLKLQGACTSCPSSIVTLKHGVQNMLQ 175
Query: 178 HFVPEVKDIRTV 189
+VPEV + V
Sbjct: 176 FYVPEVLSVEAV 187
>gi|47212055|emb|CAF90173.1| unnamed protein product [Tetraodon nigroviridis]
Length = 196
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 78/191 (40%), Positives = 120/191 (62%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MF+QT+DTPNP +LKF+PG VL G ++F + ++A SPLA ++F + G+ SV G DF
Sbjct: 1 MFVQTQDTPNPNSLKFLPGCTVLETGTMNFDSPRDAHCSPLARQLFRVDGVKSVLLGPDF 60
Query: 61 ITVGKDQY--DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
IT+ K DW+ ++P V IM+ F SG P++ G + + D +V
Sbjct: 61 ITISKIDANIDWKVIKPDVFATIMDFFTSGLPVVSEGSKQ------IEDTAPSDDDDELV 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGD++++G+ G+V L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 115 AMIKELLDTRIRPTVQEDGGDVLYRGFEGGVVKLKLQGSCTSCPSSIITLKSGIQNMLQF 174
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 175 YIPEVESVEQV 185
>gi|85714190|ref|ZP_01045179.1| nitrogen-fixing NifU [Nitrobacter sp. Nb-311A]
gi|85699316|gb|EAQ37184.1| nitrogen-fixing NifU [Nitrobacter sp. Nb-311A]
Length = 190
Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats.
Identities = 89/180 (49%), Positives = 131/180 (72%), Gaps = 1/180 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ VL + + F++A SPLA ++F++ G+ V++G DF
Sbjct: 1 MFIQTEITPNPATLKFLPGRTVLGKDTMEFTSASTTARSPLAVKLFAVHGVTGVFYGSDF 60
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV KD DW+HL+P +LG+IMEH++SG P++ + G + F E+D+ V
Sbjct: 61 ITVTKDDASDWQHLKPAILGVIMEHYMSGAPLLADDGGNTEPNAENDVEFFDEADAETVT 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IK++++ RVRP VA DGGDI F+G++DG+V+++M+GACSGCPS++ TL+ G+ N+L HF
Sbjct: 121 LIKDLIETRVRPGVADDGGDITFRGFKDGVVYVNMKGACSGCPSSTVTLRNGIQNLLKHF 180
>gi|156044806|ref|XP_001588959.1| hypothetical protein SS1G_10507 [Sclerotinia sclerotiorum 1980]
gi|154694895|gb|EDN94633.1| hypothetical protein SS1G_10507 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 372
Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats.
Identities = 81/201 (40%), Positives = 118/201 (58%), Gaps = 12/201 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG----AIHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTEDTPNP LKF+P +L I + N + SPLA+ + +I G+
Sbjct: 76 IFIQTEDTPNPDALKFLPNHPILPPSLNAPFIEYLNPRSTLAPPHPSPLAASLMNIDGVK 135
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIH---NGGLGDMKLDDMGSG 108
SV++G DFITV K D +W H++P + +I E SG I++ G ++ S
Sbjct: 136 SVFYGVDFITVTKADDANWAHIKPEIFSLITEAVTSGAQIVNITEKTGASGEAPEEEDSL 195
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+ E D VV IKE+L+ R+RPA+ DGGDI ++G+ DG+V L +RGAC C S++ TL
Sbjct: 196 AYNEDDPEVVGMIKELLETRIRPAIQEDGGDIDYRGFEDGMVKLKLRGACRTCDSSTVTL 255
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ +L H++ EVK + V
Sbjct: 256 KNGIEGMLMHYIEEVKGVVQV 276
>gi|295687469|ref|YP_003591162.1| Scaffold protein Nfu/NifU [Caulobacter segnis ATCC 21756]
gi|295429372|gb|ADG08544.1| Scaffold protein Nfu/NifU [Caulobacter segnis ATCC 21756]
Length = 191
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 100/191 (52%), Positives = 128/191 (67%), Gaps = 6/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF+PG+ VLVEGA F A+E E SPLA +F + + V+FG DF
Sbjct: 1 MFIQTETTPNPEVLKFLPGREVLVEGAREFRTAEEGEASPLAKALFDLGDVTRVFFGPDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + W HL+ P+L IM+HF SG P++ + G +D G + E S +V
Sbjct: 61 LTVTKGEAAQWPHLKAPILAAIMDHFTSGRPLLLDAEPGGGHDED---GVYDEEASQIVA 117
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+LD R+RPAVA+DGGDIVF + G+V+L MRGACSGCPS+S TLK GV N+L
Sbjct: 118 EIKELLDTRIRPAVAQDGGDIVFSRFEPQTGVVWLHMRGACSGCPSSSATLKAGVENMLK 177
Query: 178 HFVPEVKDIRT 188
H+VPEV +
Sbjct: 178 HYVPEVTRVEQ 188
>gi|308802059|ref|XP_003078343.1| NifU-like domain-containing proteins (ISS) [Ostreococcus tauri]
gi|116056795|emb|CAL53084.1| NifU-like domain-containing proteins (ISS) [Ostreococcus tauri]
Length = 244
Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats.
Identities = 90/191 (47%), Positives = 125/191 (65%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MF+QT+ TPNP +L F PG+ V EG+ +F +A+EA +SPLA R+F+I G+ +V+ G DF
Sbjct: 40 MFVQTQATPNPESLMFQPGRDVYAEGSRNFGSAREAMVSPLARRLFAIDGVTNVFLGVDF 99
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV KD +DWE ++P IM+ + SG+ ++ L + E D VV
Sbjct: 100 ITVTKDADHDWETVKPRTFEAIMDFYASGEAVVDEASL------EGHGTAIEEDDDEVVA 153
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAVA DGGDIVFK Y G+V + + GAC GCPS+S TLK G+ N+L
Sbjct: 154 MIKELLETRIRPAVAEDGGDIVFKAYDQETGVVSVQLMGACDGCPSSSVTLKSGIENMLM 213
Query: 178 HFVPEVKDIRT 188
H+VPEVK ++
Sbjct: 214 HYVPEVKGVQQ 224
>gi|115390869|ref|XP_001212939.1| HIRA-interacting protein 5 [Aspergillus terreus NIH2624]
gi|114193863|gb|EAU35563.1| HIRA-interacting protein 5 [Aspergillus terreus NIH2624]
Length = 323
Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats.
Identities = 77/201 (38%), Positives = 119/201 (59%), Gaps = 12/201 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE+TPNP LKFIP VL E + + + + SPLA+ + ++ G+
Sbjct: 86 IFIQTENTPNPDALKFIPNHRVLPEDFPTTFLEYLSPRSTLAPPHPSPLAANLLNVEGVT 145
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD-- 109
SV++G DFITV K +W H++P V +I + SG+ +++ + G +
Sbjct: 146 SVFYGPDFITVTKASDANWAHIKPEVFSLITQAVTSGEALVNTVAKTGEHAQEGGEEESL 205
Query: 110 -FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+ E D VV IKE+LD R+RPA+ DGGDI F+G+ +GIV L +RGAC C S++ TL
Sbjct: 206 GYNEEDDEVVSMIKELLDTRIRPAIQEDGGDIEFRGFENGIVMLKLRGACRTCDSSTVTL 265
Query: 169 KYGVANILNHFVPEVKDIRTV 189
+ G+ ++L H++ EV+ + V
Sbjct: 266 RNGIESMLMHYIEEVQGVEQV 286
>gi|115946407|ref|XP_001184965.1| PREDICTED: similar to HIRA interacting protein 5
[Strongylocentrotus purpuratus]
Length = 209
Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats.
Identities = 87/192 (45%), Positives = 117/192 (60%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKF+PG VL G F +A A SPLA ++F I G+ V+FG DF
Sbjct: 1 MFIQTQDTPNPNSLKFLPGVEVLGTGTKDFPSAMNAHGSPLARQLFRIEGVQGVFFGPDF 60
Query: 61 ITVGK---DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
ITV K D DW L+P + +M+ F +G PI+ + + E D
Sbjct: 61 ITVTKMDDDNIDWRVLKPEIYATVMDFFATGVPILTDE-------TAPTDTEIQEDDDET 113
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD R+RP V DGGDIV+ G+ +G+V L ++GAC+ CPS+ TLK+GV N+L
Sbjct: 114 VMMIKELLDTRIRPTVQEDGGDIVYMGFEEGVVKLKLQGACTSCPSSIVTLKHGVQNMLQ 173
Query: 178 HFVPEVKDIRTV 189
+VPEV + V
Sbjct: 174 FYVPEVLSVEAV 185
>gi|189200054|ref|XP_001936364.1| HIRA-interacting protein 5 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983463|gb|EDU48951.1| HIRA-interacting protein 5 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 312
Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats.
Identities = 86/202 (42%), Positives = 121/202 (59%), Gaps = 13/202 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
MFIQTE TPN LKF P Q VL E + + N + SPLA+++ +I GI
Sbjct: 70 MFIQTEPTPNADALKFNPNQRVLPENISSPFLEYLNPRSTLAPPHPSPLAAQLMNIDGIT 129
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKL----DDMGS 107
SV+FG D+ITV KD W H++P V +I E+ SG PI++ + + S
Sbjct: 130 SVFFGADYITVTKDSSTPWAHIKPEVFALINEYMTSGQPIVNTVAAKAGEQGQGGQENDS 189
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASET 167
+ E+D VV IKE+L+ RVRPA+ DGGDI F+G+ DG V+L +RGAC C S++ T
Sbjct: 190 LAYDENDDEVVGMIKELLETRVRPAIQEDGGDIEFRGFNDGQVWLKLRGACRTCDSSTVT 249
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
LK G+ ++L H++ EVK ++ V
Sbjct: 250 LKNGIESMLMHYIEEVKGVQQV 271
>gi|302381462|ref|YP_003817285.1| Scaffold protein Nfu/NifU [Brevundimonas subvibrioides ATCC 15264]
gi|302192090|gb|ADK99661.1| Scaffold protein Nfu/NifU [Brevundimonas subvibrioides ATCC 15264]
Length = 185
Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats.
Identities = 85/193 (44%), Positives = 124/193 (64%), Gaps = 13/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF+PG+ V G+ F + +A SPLA +F + ++ V+FG D
Sbjct: 1 MFIQTEPTPNPNALKFLPGRDVAPGGSREFLSIDQATASPLAEALFQLEDVSGVFFGGDH 60
Query: 61 ITVGKDQY--DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
I+V + ++ DW ++P +L +IM+HF+SG P++ G D E DS +V
Sbjct: 61 ISVTRAEHGRDWSEMKPEILSVIMDHFVSGQPLMREGADAV---------DHAEDDSEIV 111
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IK +LD+R+RPAVA+DGGDI+F + + G++ L MRGAC+GCPS++ TLK GV ++
Sbjct: 112 AEIKSLLDSRIRPAVAQDGGDILFDAFDEESGVLRLRMRGACAGCPSSAMTLKAGVEQMM 171
Query: 177 NHFVPEVKDIRTV 189
H+VPEV + V
Sbjct: 172 RHYVPEVTSVEQV 184
>gi|170741563|ref|YP_001770218.1| scaffold protein Nfu/NifU [Methylobacterium sp. 4-46]
gi|168195837|gb|ACA17784.1| Scaffold protein Nfu/NifU [Methylobacterium sp. 4-46]
Length = 187
Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats.
Identities = 98/191 (51%), Positives = 136/191 (71%), Gaps = 6/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL +G + +A SPLA +F++PG+A VYFG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGKVVLTDGTFEARSPDQAAPSPLARALFAVPGVAGVYFGHDF 60
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
I+V K D +W ++P VLG IMEHF+SG P++ G ++ + D+ V
Sbjct: 61 ISVTKAEDGSEWPQVKPAVLGAIMEHFLSGAPVLDAGAAPAAPAEEFFAEA----DADTV 116
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IK++L+ RVRPAVA DGGDI F+GYR+G+V+L M+GACSGCPS++ TL+ GV N+ H
Sbjct: 117 ATIKDLLETRVRPAVAGDGGDITFRGYREGVVYLEMKGACSGCPSSTATLRQGVQNLFRH 176
Query: 179 FVPEVKDIRTV 189
F+PEV++++ V
Sbjct: 177 FLPEVREVQAV 187
>gi|167520450|ref|XP_001744564.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776895|gb|EDQ90513.1| predicted protein [Monosiga brevicollis MX1]
Length = 209
Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats.
Identities = 81/190 (42%), Positives = 117/190 (61%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT DTPNP +L F PG +L + ++A A SPLA +F + G+ SV+ DF
Sbjct: 1 MFIQTRDTPNPNSLMFYPGVDILPGSTLELTSAAAAHQSPLARALFRVDGVKSVFLASDF 60
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+T+ KD+ +W L+P + +M+ F S P++ + + E D +V
Sbjct: 61 VTINKDEAAEWSTLKPNIYATMMDFFASNQPVVLDSY------EAPTDTAVSEDDDEIVA 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+LD+R+RPAV DGGDI+F+G+ DGIV L + GAC+GCPS+ TLK GV N+L H+
Sbjct: 115 MIKELLDSRIRPAVQEDGGDILFQGFVDGIVQLRLSGACTGCPSSIFTLKNGVENMLMHY 174
Query: 180 VPEVKDIRTV 189
+PEV+ + V
Sbjct: 175 IPEVEGVEQV 184
>gi|149186788|ref|ZP_01865099.1| hypothetical protein ED21_29856 [Erythrobacter sp. SD-21]
gi|148829696|gb|EDL48136.1| hypothetical protein ED21_29856 [Erythrobacter sp. SD-21]
Length = 193
Score = 257 bits (656), Expect = 8e-67, Method: Composition-based stats.
Identities = 88/192 (45%), Positives = 130/192 (67%), Gaps = 4/192 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+TE TPNPA+LKF+PG+ V+ +G F+N + AE SPLA IF + +V+FG DF
Sbjct: 1 MFIETETTPNPASLKFLPGRPVMGQGTREFANPEAAEASPLAQAIFDTGEVVNVFFGGDF 60
Query: 61 ITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES---DSA 116
ITV W L+P VL ++++HF+S P+ G G + + +E D+
Sbjct: 61 ITVTSAPGVSWSDLKPQVLSILLDHFVSEAPLFVPGTAGGIAVPAEDEALLVEENAADAD 120
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+V +I E+L+ RVRPAVA DGGDI ++G++DG+V+L ++GACSGCPS++ TLK+G+ +L
Sbjct: 121 IVAQINELLETRVRPAVAGDGGDIQYRGFKDGVVYLQLQGACSGCPSSTATLKHGIEGLL 180
Query: 177 NHFVPEVKDIRT 188
H+VPEV ++R
Sbjct: 181 KHYVPEVVEVRA 192
>gi|328862177|gb|EGG11278.1| hypothetical protein MELLADRAFT_41822 [Melampsora larici-populina
98AG31]
Length = 292
Score = 257 bits (656), Expect = 8e-67, Method: Composition-based stats.
Identities = 84/194 (43%), Positives = 126/194 (64%), Gaps = 8/194 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE--GAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+FIQTE TPNP LKFIPG V+ + G + F + SPLA +F IPGI S++FG
Sbjct: 74 IFIQTETTPNPDALKFIPGVPVMGKSNGTLEFLSNSNPNSSPLAKSLFKIPGIKSLFFGP 133
Query: 59 DFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
DFI++ KD+ +W ++P + ++ME F SG PI+ + G+ +D +ESDS V
Sbjct: 134 DFISINKDEETNWSIIKPEIYSLMMEFFSSGQPILTDESEGNQGPED---TRVLESDSEV 190
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANI 175
+ IKE+LD RVRP++ DGGD+ +KG+ + G+V L ++G+C GC S++ TLK G+ +
Sbjct: 191 IAMIKELLDTRVRPSIQEDGGDLEYKGFDEETGVVTLMLKGSCRGCDSSTVTLKSGIERM 250
Query: 176 LNHFVPEVKDIRTV 189
L H++PEV+ + V
Sbjct: 251 LMHYIPEVQAVEQV 264
>gi|67516331|ref|XP_658051.1| hypothetical protein AN0447.2 [Aspergillus nidulans FGSC A4]
gi|40747390|gb|EAA66546.1| hypothetical protein AN0447.2 [Aspergillus nidulans FGSC A4]
gi|259489306|tpe|CBF89467.1| TPA: NifU-related protein (AFU_orthologue; AFUA_1G04680)
[Aspergillus nidulans FGSC A4]
Length = 326
Score = 257 bits (656), Expect = 8e-67, Method: Composition-based stats.
Identities = 81/201 (40%), Positives = 120/201 (59%), Gaps = 12/201 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEAEISP----LASRIFSIPGIA 52
+FIQTE TPNP LKFIP VL E + + + + P LA+ +F++ G+
Sbjct: 89 IFIQTESTPNPDALKFIPNHRVLPEDFPTSFLEYLSPRSTLAPPHPSTLAANLFNVEGVQ 148
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHN---GGLGDMKLDDMGSG 108
SV+FG DFITV K +W H++P V +I + SG+PI++ G K + S
Sbjct: 149 SVFFGTDFITVTKASDTNWAHIKPEVFSLITQAVTSGEPIVNTVEKSGASGQKGGEEDSL 208
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+ E D VV IKE+L+ R+RPA+ DGGDI F+G+ +GIV L +RGAC C S++ TL
Sbjct: 209 SYNEEDDEVVSMIKELLETRIRPAIQEDGGDIEFRGFENGIVMLKLRGACRTCDSSTVTL 268
Query: 169 KYGVANILNHFVPEVKDIRTV 189
+ G+ ++L H++ EV+ + V
Sbjct: 269 RNGIESMLMHYIEEVQGVEQV 289
>gi|296421235|ref|XP_002840171.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636384|emb|CAZ84362.1| unnamed protein product [Tuber melanosporum]
Length = 279
Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats.
Identities = 81/192 (42%), Positives = 123/192 (64%), Gaps = 9/192 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG--AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+FIQTE TPNP+ LKFIPG VL EG + + + +E SPLA ++F++ G+ SV++G
Sbjct: 48 LFIQTESTPNPSALKFIPGLPVLPEGCQSQEYIDGRETHNSPLARKLFAVDGVRSVFYGP 107
Query: 59 DFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
DFIT+ KD+ W L+ V +I E SG+P+I G + + E DS V
Sbjct: 108 DFITITKDEETQWAFLKAEVYSLITEALNSGEPVILEGTM------ESSDTQREEGDSEV 161
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+L+ R+RPA+ DGGDI ++G+ +G+V L +RGAC C S++ TLK G+ ++L
Sbjct: 162 VGMIKELLETRIRPAIQEDGGDIEYRGFENGVVKLKLRGACRTCDSSTVTLKNGIESMLM 221
Query: 178 HFVPEVKDIRTV 189
H++ EV+ ++ +
Sbjct: 222 HYIEEVQSVQQI 233
>gi|307189950|gb|EFN74186.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Camponotus floridanus]
Length = 289
Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats.
Identities = 84/192 (43%), Positives = 118/192 (61%), Gaps = 12/192 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKFIPG VL EG F +AK+A S LA +F I G+ +++FG D
Sbjct: 81 MFIQTQDTPNPNSLKFIPGVPVLGEGCTKDFPSAKDAYCSSLAKMLFRIEGVKAIFFGPD 140
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FITV K + +W+ L+P + IM+ F SG PI++ D +
Sbjct: 141 FITVTKLDEDVEWKLLKPEIFATIMDFFASGLPIMNE------TSQPATDTQINADDDEI 194
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
VQ IKE+L+ R+RP V DGGDI G+ +GIV L M+G+C+ CPS++ TL+ GV N++
Sbjct: 195 VQMIKELLETRIRPTVQEDGGDI---GFEEGIVKLKMQGSCTNCPSSAVTLRNGVQNMMR 251
Query: 178 HFVPEVKDIRTV 189
++PEV + V
Sbjct: 252 FYIPEVLGVVQV 263
>gi|167643992|ref|YP_001681655.1| scaffold protein Nfu/NifU [Caulobacter sp. K31]
gi|167346422|gb|ABZ69157.1| Scaffold protein Nfu/NifU [Caulobacter sp. K31]
Length = 189
Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats.
Identities = 96/191 (50%), Positives = 126/191 (65%), Gaps = 7/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF+PG+ VL EGA F A+E + SPLA +F + + V+FG DF
Sbjct: 1 MFIQTETTPNPEVLKFLPGREVLGEGAREFKTAEEGDASPLAEALFRLGDVNRVFFGPDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + +W HL+ P+L IM+HF SG P++ + D G + E S +V
Sbjct: 61 LTVTKAEGAEWPHLKAPILAAIMDHFTSGRPLLLDQAESGHDND----GVYDEETSQIVA 116
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILN 177
IK++LD R+RPAVA+DGGDIVF + G+V+L MRGACSGCPS+S TLK GV N+L
Sbjct: 117 EIKDLLDTRIRPAVAQDGGDIVFSKFEPATGVVWLHMRGACSGCPSSSATLKAGVENMLK 176
Query: 178 HFVPEVKDIRT 188
H+VPEV +
Sbjct: 177 HYVPEVTRVEQ 187
>gi|163852613|ref|YP_001640656.1| scaffold protein Nfu/NifU [Methylobacterium extorquens PA1]
gi|218531454|ref|YP_002422270.1| Scaffold protein Nfu/NifU [Methylobacterium chloromethanicum CM4]
gi|240139947|ref|YP_002964424.1| NifU-like protein [Methylobacterium extorquens AM1]
gi|254562372|ref|YP_003069467.1| NifU-like [Methylobacterium extorquens DM4]
gi|163664218|gb|ABY31585.1| Scaffold protein Nfu/NifU [Methylobacterium extorquens PA1]
gi|218523757|gb|ACK84342.1| Scaffold protein Nfu/NifU [Methylobacterium chloromethanicum CM4]
gi|240009921|gb|ACS41147.1| NifU-like protein [Methylobacterium extorquens AM1]
gi|254269650|emb|CAX25622.1| NifU-like [Methylobacterium extorquens DM4]
Length = 188
Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats.
Identities = 98/191 (51%), Positives = 135/191 (70%), Gaps = 5/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL +G + AE SPLA+ +F++PG++ VYFG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRVVLTDGTFEARDTASAERSPLATALFAVPGVSGVYFGHDF 60
Query: 61 ITVGKDQY--DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
I+V K +W ++P VLG IM+HF SG P++ G +D + E+D V
Sbjct: 61 ISVTKADGVNEWPQVKPAVLGAIMDHFQSGRPVLAEGT---ALAEDETEEFYDEADHDTV 117
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IK++L+ RVRPAVA DGGDI F+GYRDGIV+L M+GACSGCPS++ TL+ GV N+ H
Sbjct: 118 VTIKDLLETRVRPAVAGDGGDITFRGYRDGIVYLEMKGACSGCPSSTATLRQGVQNLFRH 177
Query: 179 FVPEVKDIRTV 189
F+P V++++ +
Sbjct: 178 FLPSVREVQAI 188
>gi|294012036|ref|YP_003545496.1| nitrogen-fixing NifU-like protein [Sphingobium japonicum UT26S]
gi|292675366|dbj|BAI96884.1| nitrogen-fixing NifU-like protein [Sphingobium japonicum UT26S]
Length = 190
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 85/190 (44%), Positives = 125/190 (65%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M I+TE TPNPAT+KFIPG+VV+ G F+ +EAE SPLA +F + + V+FG DF
Sbjct: 1 MLIETEATPNPATVKFIPGRVVMGMGTRDFATPEEAEASPLADALFGLGDVTGVFFGGDF 60
Query: 61 ITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I+V W ++P +L +++EHF + P+ G G++ + D +V
Sbjct: 61 ISVTIAPGAQWSDVKPDILSILLEHFSANMPLFRPGSAGEIFVPQEEEFADDPEDEEIVA 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+I+E++D RVRPAVA DGGDI+++G+ G V+L M+GACSGCPS++ TLK G+ +L H+
Sbjct: 121 QIRELIDTRVRPAVANDGGDIIYRGFDKGTVYLRMQGACSGCPSSTATLKNGIEQLLKHY 180
Query: 180 VPEVKDIRTV 189
VPEV ++R V
Sbjct: 181 VPEVTEVRAV 190
>gi|85083846|ref|XP_957202.1| HIRA-interacting protein 5 [Neurospora crassa OR74A]
gi|18376131|emb|CAD21196.1| conserved hypothetical protein [Neurospora crassa]
gi|28918289|gb|EAA27966.1| HIRA-interacting protein 5 [Neurospora crassa OR74A]
Length = 326
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 86/203 (42%), Positives = 125/203 (61%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE+TPNP +LKF+P Q V+ + I + NA+ SPLA+++ +I G+
Sbjct: 83 IFIQTENTPNPDSLKFLPNQKVIPDSIKTPFIEYMNARSTIAPPYPSPLAAQLMNIEGVT 142
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-----NGGLGDMKLDDMG 106
SV++G DFITV K +W H+RP V +I E SG I++ G + D+
Sbjct: 143 SVFYGTDFITVTKSADANWAHIRPEVFALITETITSGQTIVNVVERNEGEESTQESDEKD 202
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
S + E+DS VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++
Sbjct: 203 SLAYDENDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGIVKLKLRGACRTCDSSTV 262
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ +L H++ EV+ + V
Sbjct: 263 TLKNGIEGMLMHYIEEVQGVEQV 285
>gi|239799267|dbj|BAH70563.1| ACYPI005854 [Acyrthosiphon pisum]
Length = 254
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 87/192 (45%), Positives = 118/192 (61%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP ++KF+PG VL +G + F NA A SPLA +F I G+ SV+FG D
Sbjct: 43 MFIQTQDTPNPNSVKFLPGVQVLEKGHTMDFPNATAAYCSPLAKVLFRIEGVKSVFFGSD 102
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+IT+ K D +W L+P + IM+ F SG PI+ + E D+
Sbjct: 103 YITLTKTDDDIEWMVLKPEIYATIMDFFASGLPILTDAKP-------TSDTQIHEDDNET 155
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD+R+RP V DGGDI+F GY GIV L ++G+C+ CPS+ TLK GV N+L
Sbjct: 156 VMMIKELLDSRIRPTVQEDGGDILFIGYDAGIVKLKLQGSCTSCPSSVVTLKGGVQNMLQ 215
Query: 178 HFVPEVKDIRTV 189
++PEV + V
Sbjct: 216 FYIPEVIAVEQV 227
>gi|144900396|emb|CAM77260.1| NifU domain protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 182
Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats.
Identities = 91/191 (47%), Positives = 136/191 (71%), Gaps = 12/191 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE+TPNP+TLKF+PG+ V+ G F +A+ A SPLA+++F++ G+ASV+ G DF
Sbjct: 1 MFIQTENTPNPSTLKFLPGREVMPAGTADFGSAEAAIRSPLAAKLFTVDGVASVFLGGDF 60
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGD-PIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITVGK + W L+P +L IM+ F +G P+I+ G ++ + +V
Sbjct: 61 ITVGKTEAATWGTLKPLLLSAIMDFFTAGLLPVINEGTEKVSDGEE----------TDIV 110
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++IKE+LD RVRPAVA+DGGDI+F+ + DGIV++ ++GACSGCPS++ TLK+G+ N+L +
Sbjct: 111 RQIKELLDTRVRPAVAQDGGDIIFRSFDDGIVYVHLQGACSGCPSSTATLKHGIENMLKY 170
Query: 179 FVPEVKDIRTV 189
+VPEV ++ V
Sbjct: 171 YVPEVVAVQAV 181
>gi|302409492|ref|XP_003002580.1| HIRA-interacting protein [Verticillium albo-atrum VaMs.102]
gi|261358613|gb|EEY21041.1| HIRA-interacting protein [Verticillium albo-atrum VaMs.102]
Length = 292
Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats.
Identities = 82/198 (41%), Positives = 118/198 (59%), Gaps = 9/198 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE TPNP LKF+P VL EG I + N + SPLA+++ +I G+
Sbjct: 66 IFIQTEPTPNPDALKFLPNHRVLPEGISVPYIEYLNPRATIAPPHPSPLAAQLLAIDGVT 125
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI 111
+V++G DFITV K +W H+R + +I E SG P++ + + S +
Sbjct: 126 AVFYGADFITVTKAADANWAHVRAEIFALITEAITSGAPLVVVKEGAEAAPAEEDSLAYN 185
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E DS VV IKE+L+ R+RPA+ DGGDI F+G+ DG+V L +RGAC C S++ TLK G
Sbjct: 186 EDDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGVVLLKLRGACRTCDSSTVTLKNG 245
Query: 172 VANILNHFVPEVKDIRTV 189
+ +L H++ EVK + V
Sbjct: 246 IEGMLMHYIEEVKSVNQV 263
>gi|302773942|ref|XP_002970388.1| hypothetical protein SELMODRAFT_93100 [Selaginella moellendorffii]
gi|300161904|gb|EFJ28518.1| hypothetical protein SELMODRAFT_93100 [Selaginella moellendorffii]
Length = 210
Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats.
Identities = 86/187 (45%), Positives = 120/187 (64%), Gaps = 8/187 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+FIQ + TPNPA+L F PG+ V+ G+ F NA+ A SPLA +F I G+ V+FG DF
Sbjct: 10 LFIQVQTTPNPASLIFSPGKPVMEIGSSDFPNARTAMKSPLAKSLFGIDGVTRVFFGSDF 69
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+ L+P V IM+ + SG P+ ++ +++ E D V
Sbjct: 70 VTVTKSDDTEWDVLKPEVFAAIMDFYASGQPLFYSA-----QVEAPKDTAIEEGDDETVV 124
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS++ TLK G+ N+L
Sbjct: 125 MIKELLETRIRPAVKDDGGDIEYRGFDRESGIVELKMQGACSGCPSSAVTLKSGIENMLM 184
Query: 178 HFVPEVK 184
H+VPEVK
Sbjct: 185 HYVPEVK 191
>gi|225711062|gb|ACO11377.1| NFU1 iron-sulfur cluster scaffold homolog [Caligus rogercresseyi]
Length = 237
Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats.
Identities = 79/194 (40%), Positives = 117/194 (60%), Gaps = 11/194 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLV--EGAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
M+I+T++TPNP +LKF+PG VL + F A SPLA +F + G+ V+FG
Sbjct: 27 MYIRTQETPNPQSLKFLPGVRVLETAGSTLDFPTPSAAYCSPLAKLLFRVDGVKGVFFGQ 86
Query: 59 DFITVGKDQ---YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDS 115
DFIT+ K++ +W+ ++P V +M+ F SG PI++ + E D
Sbjct: 87 DFITITKEEDSEVEWKVIKPEVYATLMDFFASGLPIVNE------DAKPHSDTEIHEDDD 140
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE+LD+R+RP V DGGDI+F G+ DGIV L M+G+C+ CPS+ TLK GV N+
Sbjct: 141 DTVAMIKELLDSRIRPTVQEDGGDIIFMGFEDGIVKLKMQGSCTSCPSSIVTLKNGVQNM 200
Query: 176 LNHFVPEVKDIRTV 189
L ++PEV ++ +
Sbjct: 201 LQFYIPEVIEVEQI 214
>gi|114571567|ref|YP_758247.1| NifU domain-containing protein [Maricaulis maris MCS10]
gi|114342029|gb|ABI67309.1| nitrogen-fixing NifU domain protein [Maricaulis maris MCS10]
Length = 187
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 86/192 (44%), Positives = 130/192 (67%), Gaps = 9/192 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP TLKF+PG+ + +G F + ++A +PLA+ +F + G++ V+FG DF
Sbjct: 1 MFIQTEATPNPNTLKFLPGREIAPDGPREFESEEDAASAPLAADLFLVDGVSGVFFGEDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I + K D Y+W+H++P +LG IM+ SG P++ + ++ G ++ + +V+
Sbjct: 61 IAITKTDAYEWDHIKPFLLGTIMDGLQSGRPLV------GSETNETGHANYAGENEGLVK 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
I E++D RVRPAVA+DGGDI+F Y GIV L MRGACSGCPS++ TLK G+ N+L
Sbjct: 115 EIIELIDTRVRPAVAQDGGDILFHSYLADSGIVRLKMRGACSGCPSSTMTLKSGIENLLK 174
Query: 178 HFVPEVKDIRTV 189
H++PE++ + V
Sbjct: 175 HYIPEIQSVEAV 186
>gi|302769472|ref|XP_002968155.1| hypothetical protein SELMODRAFT_67451 [Selaginella moellendorffii]
gi|300163799|gb|EFJ30409.1| hypothetical protein SELMODRAFT_67451 [Selaginella moellendorffii]
Length = 187
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 87/187 (46%), Positives = 118/187 (63%), Gaps = 8/187 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+FIQ + TPNPA+L F PG+ V+ G+ F NA+ A SPLA +F I G+ V+FG DF
Sbjct: 6 LFIQVQTTPNPASLIFSPGKPVMEIGSSDFPNARTAMKSPLAKSLFGIDGVTRVFFGSDF 65
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W+ L+P V IM+ + SG P+ ++ K E D V
Sbjct: 66 VTVTKSDDTEWDVLKPEVFAAIMDFYASGQPLFYSAQAAAPK-----DTAIEEGDDETVV 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS++ TLK G+ N+L
Sbjct: 121 MIKELLETRIRPAVKDDGGDIEYRGFDRESGIVELKMQGACSGCPSSAVTLKSGIENMLM 180
Query: 178 HFVPEVK 184
H+VPEVK
Sbjct: 181 HYVPEVK 187
>gi|307293136|ref|ZP_07572982.1| Scaffold protein Nfu/NifU [Sphingobium chlorophenolicum L-1]
gi|306881202|gb|EFN12418.1| Scaffold protein Nfu/NifU [Sphingobium chlorophenolicum L-1]
Length = 190
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 86/190 (45%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M I+TE TPNPAT+KF+PG+VV+ G F+ +EAE SPLA +F + + V+FG DF
Sbjct: 1 MLIETEATPNPATVKFLPGRVVMGMGTRDFATPEEAEASPLADALFGLGDVTGVFFGGDF 60
Query: 61 ITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I+V W ++P +L +++EHF P+ G GD+ + + D+ +V
Sbjct: 61 ISVTIAPGAQWSDVKPDILSILLEHFSVNMPLFAPGSAGDIFVPEEEEFADDPEDAEIVS 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+I+E++D RVRPAVA DGGDIV++G+ G V+L M+GACSGCPS++ TLK G+ +L H+
Sbjct: 121 QIRELIDTRVRPAVANDGGDIVYRGFDKGTVYLRMQGACSGCPSSTATLKNGIEQLLKHY 180
Query: 180 VPEVKDIRTV 189
VPEV ++R V
Sbjct: 181 VPEVTEVRAV 190
>gi|212540194|ref|XP_002150252.1| NifU-related protein [Penicillium marneffei ATCC 18224]
gi|210067551|gb|EEA21643.1| NifU-related protein [Penicillium marneffei ATCC 18224]
Length = 321
Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats.
Identities = 82/203 (40%), Positives = 121/203 (59%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE TPNP LKF+P VL E + + + + SPLA+++ +I GI+
Sbjct: 81 IFIQTESTPNPDALKFLPNNRVLPENFSTPFLEYLSPRSTLAPPHPSPLAAKLLNIEGIS 140
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD-- 109
SV++G DFITV K +W H++P V +I E SG+PI++ D G
Sbjct: 141 SVFYGPDFITVTKSSDVNWAHVKPEVFSLITEVVTSGEPIVNTVEHTSGAQDAQEGGGED 200
Query: 110 ---FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ E D VV IKE+L+ R+RPA+ DGGDI F+G+ +GIV L +RGAC C S++
Sbjct: 201 TLGYNEEDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFENGIVLLKLRGACRTCDSSTV 260
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ ++L H++ EV+ ++ V
Sbjct: 261 TLKNGIESMLMHYIEEVQGVQQV 283
>gi|94498004|ref|ZP_01304568.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. SKA58]
gi|94422587|gb|EAT07624.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. SKA58]
Length = 194
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 88/191 (46%), Positives = 131/191 (68%), Gaps = 2/191 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M I+TE TPNPAT+KFIPG+VV+ G F++ +EAE SPLAS +F++ + V+FG DF
Sbjct: 4 MLIETEPTPNPATVKFIPGRVVMGAGTRDFASPEEAEASPLASALFTLGDVTGVFFGGDF 63
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDF-IESDSAVV 118
I+V + DW ++P VL +++EHF + P+ G G++ + D+ +V
Sbjct: 64 ISVTIGEGSDWRDVKPEVLSILLEHFSANMPLFVAGSAGEIHVPADDDAFAENPEDAEIV 123
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+I+E++D RVRPAVA DGGDI+++G+ G V+L M+GAC+GCPS+S TLK G+ +L H
Sbjct: 124 DQIRELIDTRVRPAVANDGGDIIYRGFDKGTVYLKMQGACAGCPSSSATLKNGIEQLLKH 183
Query: 179 FVPEVKDIRTV 189
+VPEV ++R V
Sbjct: 184 YVPEVTEVRAV 194
>gi|193599106|ref|XP_001949519.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Acyrthosiphon pisum]
Length = 254
Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats.
Identities = 86/192 (44%), Positives = 117/192 (60%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP ++KF+PG VL +G + F NA A SPLA +F I G+ SV+FG D
Sbjct: 43 MFIQTQDTPNPNSVKFLPGVQVLEKGHTMDFPNATAAYCSPLAKVLFRIEGVKSVFFGSD 102
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+IT+ K D +W L+P + IM+ F SG PI+ + E D+
Sbjct: 103 YITLTKTDDDIEWMVLKPEIYATIMDFFASGLPILTDAKP-------TSDTQIHEDDNET 155
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD+R+RP V DGGDI+F GY GIV L ++G+C+ CPS+ TLK GV +L
Sbjct: 156 VMMIKELLDSRIRPTVQEDGGDILFIGYDAGIVKLKLQGSCTSCPSSVVTLKGGVQYMLQ 215
Query: 178 HFVPEVKDIRTV 189
++PEV + V
Sbjct: 216 FYIPEVIAVEQV 227
>gi|322696539|gb|EFY88330.1| NifU-like protein [Metarhizium acridum CQMa 102]
Length = 297
Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats.
Identities = 82/199 (41%), Positives = 120/199 (60%), Gaps = 10/199 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE+TPNP LKF+P V+ E I + N + SPLA+++ +I GI
Sbjct: 73 IFIQTENTPNPDALKFLPNHRVVPEEINTPFIEYLNPRSTISPPYPSPLAAKLMNIDGIT 132
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD-DMGSGDF 110
SV++G DFITV K +W H+RP + +I E SG+ I+ + D + S +
Sbjct: 133 SVFYGADFITVTKAGDANWAHIRPEIFALITEAITSGETIVSVAERKEGDEDIEEDSLAY 192
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
E+DS VV IKE+L+ R+RPA+ DGGDI ++G+ DG V L +RGAC C S++ TLK
Sbjct: 193 NENDSEVVGMIKELLETRIRPAIQEDGGDIEYRGFDDGYVKLKLRGACRTCDSSTVTLKN 252
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ +L H++ EVK + +
Sbjct: 253 GIEGMLMHYIEEVKGVHQI 271
>gi|302927119|ref|XP_003054431.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735372|gb|EEU48718.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 309
Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats.
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 13/202 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE TPNP LKF+P V+ EG I + N + SPLA+++ +I G+
Sbjct: 76 IFIQTEGTPNPDALKFLPNHRVVPEGISTPFIEYLNPRATISPPHPSPLAAKLMNIDGVT 135
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD-- 109
SV++G DFITV K +W H+RP + +I E SG+ +++ + + D
Sbjct: 136 SVFYGADFITVTKAADANWAHIRPEIFALITEAITSGETLVNVAERREGETHPEAEEDSL 195
Query: 110 -FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASET 167
+ E DS VV IKE+L+ R+RPA+ DGGDI F+G+ D G V L +RGAC C S++ T
Sbjct: 196 AYNEDDSEVVGMIKELLETRIRPAIQEDGGDIDFRGFDDEGYVHLRLRGACRTCDSSTVT 255
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
LK G+ +L H++ EVK ++ V
Sbjct: 256 LKNGIEGMLMHYIEEVKGVKQV 277
>gi|145228927|ref|XP_001388772.1| nifU-related protein [Aspergillus niger CBS 513.88]
gi|134054866|emb|CAK36880.1| unnamed protein product [Aspergillus niger]
Length = 330
Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats.
Identities = 75/201 (37%), Positives = 119/201 (59%), Gaps = 12/201 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE+TPNP LKFIP VL E + + + + SPLA+ + ++ G+
Sbjct: 89 IFIQTENTPNPDALKFIPNHRVLPENFPTTFLEYLSPRSTLAPPHPSPLAASLLNVDGVT 148
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD-- 109
SV++G DFITV K +W H++P + +I + SG+ I++ + G +
Sbjct: 149 SVFYGPDFITVTKATDSNWAHIKPEIFSLITQAVTSGEAIVNTVAKTGESGQEGGESESL 208
Query: 110 -FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+ E + V+ IKE+LD R+RPA+ DGGDI F+G+ +GIV L +RGAC C S++ TL
Sbjct: 209 AYEEEEDEVIGMIKELLDTRIRPAIQEDGGDIEFRGFENGIVLLKLRGACRTCDSSTVTL 268
Query: 169 KYGVANILNHFVPEVKDIRTV 189
+ G+ ++L H++ EV+ + V
Sbjct: 269 RNGIESMLMHYIEEVQGVEQV 289
>gi|148555295|ref|YP_001262877.1| scaffold protein Nfu/NifU-like protein [Sphingomonas wittichii RW1]
gi|148500485|gb|ABQ68739.1| Scaffold protein Nfu/NifU-like protein [Sphingomonas wittichii RW1]
Length = 192
Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats.
Identities = 90/189 (47%), Positives = 132/189 (69%), Gaps = 2/189 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M I+TE TPNPATLKF+PG+ V+ G F + EA SPLA +FS+ + V+FG DF
Sbjct: 4 MLIETEPTPNPATLKFLPGRPVMTTGTRDFVDPDEASASPLAEALFSLGDVTGVFFGRDF 63
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
++V + +W L+P VLG++++HF S P+ G ++ +DD D +D+ +V
Sbjct: 64 VSVTAAEGVEWTGLKPQVLGVLLDHFSSEAPLFTGGSAAEIAIDDSDFTD-DPADADIVA 122
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK+++D RVRPAVARDGGDIV++G++ G V+LSM+GACSGCPS++ TLK G+ +L H+
Sbjct: 123 QIKDLIDTRVRPAVARDGGDIVYRGFQRGTVYLSMQGACSGCPSSAATLKQGIETLLKHY 182
Query: 180 VPEVKDIRT 188
VPEV ++R
Sbjct: 183 VPEVTEVRA 191
>gi|168061090|ref|XP_001782524.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666009|gb|EDQ52676.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 253 bits (648), Expect = 6e-66, Method: Composition-based stats.
Identities = 82/192 (42%), Positives = 116/192 (60%), Gaps = 9/192 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQ E TPNP +L F PG+ V+ G+ F N++ A SPLA IF + G+ V+FG DF
Sbjct: 14 MFIQVESTPNPQSLMFYPGKPVMEVGSSDFPNSRAAMASPLAKSIFIVDGVVRVFFGADF 73
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + W+ L+P + IM+ + + P+ ++ E D V
Sbjct: 74 VTVTKSEDVSWDILKPEIFAAIMDFYATKQPLFYD------TQSQASDTAIHEDDDETVA 127
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAV DGGDI ++G+ GIV L M+GACSGCPS++ TLK G+ N+L
Sbjct: 128 MIKELLETRIRPAVQDDGGDIEYRGFDPESGIVSLKMQGACSGCPSSAVTLKSGIENMLM 187
Query: 178 HFVPEVKDIRTV 189
H+V EVK ++ V
Sbjct: 188 HYVSEVKGVQEV 199
>gi|329114732|ref|ZP_08243489.1| Scaffold Protein Nfu/NifU [Acetobacter pomorum DM001]
gi|326695863|gb|EGE47547.1| Scaffold Protein Nfu/NifU [Acetobacter pomorum DM001]
Length = 186
Score = 253 bits (648), Expect = 6e-66, Method: Composition-based stats.
Identities = 100/192 (52%), Positives = 133/192 (69%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE-GAIHFSNAKE-AEISPLASRIFSIPGIASVYFGY 58
MFI+TE TPNPATLKF+PGQ V+ + G I F +A A SPLA +F++PG++ V+ G
Sbjct: 1 MFIETEGTPNPATLKFLPGQAVMGDAGTIDFIDADAVAGRSPLAEALFALPGVSRVFLGN 60
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
DF++V K D DWE LRP +L +M+HF++G P++ G + D +
Sbjct: 61 DFVSVTKADSEDWEELRPQILSTLMDHFVAGHPVVAEGV-------AVTEDATAPEDEEI 113
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +IKE+LD RVRPAVA DGGDIVF+GYR+GIV L+M+GACSGCPS+ TLK+GV N+L
Sbjct: 114 VTQIKELLDTRVRPAVAGDGGDIVFRGYRNGIVRLTMQGACSGCPSSRATLKHGVENMLR 173
Query: 178 HFVPEVKDIRTV 189
H+VPEV + V
Sbjct: 174 HYVPEVVSVEQV 185
>gi|322798976|gb|EFZ20436.1| hypothetical protein SINV_01605 [Solenopsis invicta]
Length = 226
Score = 253 bits (648), Expect = 6e-66, Method: Composition-based stats.
Identities = 88/192 (45%), Positives = 120/192 (62%), Gaps = 9/192 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKFIPG VL EG F +AK+A SPLA +F I G+ +++FG D
Sbjct: 15 MFIQTQDTPNPNSLKFIPGVSVLGEGCTKDFPSAKDAYCSPLAKMLFRIEGVKAIFFGPD 74
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FITV K + +W+ L+P V IM+ F +G P++ D D +
Sbjct: 75 FITVTKIDEDVEWKLLKPEVFATIMDFFATGLPVM------DETSQPAADTQINAEDDEI 128
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
VQ IKE+LD R+RP V DGGDIVF G+ +GIV L M+G+C+ CPS+ TL+ GV N++
Sbjct: 129 VQMIKELLDTRIRPTVQEDGGDIVFVGFEEGIVKLKMQGSCTNCPSSVVTLRNGVQNMMQ 188
Query: 178 HFVPEVKDIRTV 189
++PEV + V
Sbjct: 189 FYIPEVLGVIQV 200
>gi|322710719|gb|EFZ02293.1| NifU-like protein [Metarhizium anisopliae ARSEF 23]
Length = 297
Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats.
Identities = 83/199 (41%), Positives = 120/199 (60%), Gaps = 10/199 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE+TPNP LKF+P V+ E I + N + SPLA+++ +I GI
Sbjct: 73 IFIQTENTPNPDALKFLPNHRVVPEEINTPFIEYLNPRSTISPPYPSPLAAKLMNIDGIT 132
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD-DMGSGDF 110
SV++G DFITV K +W H+RP + +I E SG+ I+ + D + S +
Sbjct: 133 SVFYGADFITVTKAGDANWAHVRPEIFALITEAITSGETIVSIAERKEGDEDIEEDSLAY 192
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
E+DS VV IKE+L+ R+RPA+ DGGDI F+G+ DG V L +RGAC C S++ TLK
Sbjct: 193 NENDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFDDGYVKLKLRGACRTCDSSTVTLKN 252
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ +L H++ EVK + +
Sbjct: 253 GIEGMLMHYIEEVKGVHQI 271
>gi|225707158|gb|ACO09425.1| HIRA-interacting protein 5 [Osmerus mordax]
Length = 268
Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats.
Identities = 83/189 (43%), Positives = 115/189 (60%), Gaps = 10/189 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
IQT+DTPNP +LKF+PG+ VL G + F + AE S LA +F I G+ SV+FG DFIT
Sbjct: 66 IQTQDTPNPRSLKFLPGKPVLGTGTLDFPTPQNAECSSLAKDLFEIEGVKSVFFGPDFIT 125
Query: 63 VGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
V K D +W +++ + I + F SG PI + E D +V
Sbjct: 126 VTKADDDVEWTNIKRHAVEAITKFFDSGAPITTGVSHHESS--------HSEDDDEIVSI 177
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+LD R+RP V DGGD++FKG+ DG V L + G+C+GCPS+S TL+ G+ N+L ++
Sbjct: 178 IKELLDTRIRPTVQEDGGDVIFKGFEDGTVKLKLVGSCTGCPSSSVTLRNGIQNMLQFYI 237
Query: 181 PEVKDIRTV 189
PEV D+ V
Sbjct: 238 PEVDDVEQV 246
>gi|171689560|ref|XP_001909720.1| hypothetical protein [Podospora anserina S mat+]
gi|170944742|emb|CAP70853.1| unnamed protein product [Podospora anserina S mat+]
Length = 323
Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats.
Identities = 78/207 (37%), Positives = 121/207 (58%), Gaps = 18/207 (8%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE TPN +LKF+P VL E + + + + SPLA+ + ++ G+
Sbjct: 77 IFIQTEPTPNANSLKFLPNHPVLPESISTPFVEYLSPRSTISPPYPSPLAANLMNVDGVT 136
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH---------NGGLGDMKL 102
SV++G DFITV K W H+RP + +I E SG P+++ + + +
Sbjct: 137 SVFYGQDFITVTKSADAVWAHIRPEIFSLITEAITSGQPLVNISQQSASSPSTAEQEQES 196
Query: 103 DDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCP 162
+ S ++ E+DS VV IKE+L+ R+RPA+ DGGDI F+G+ +GIV L +RGAC C
Sbjct: 197 GERDSLEYDENDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFENGIVMLKLRGACRTCD 256
Query: 163 SASETLKYGVANILNHFVPEVKDIRTV 189
S++ TLK G+ +L H++ EV+ + V
Sbjct: 257 SSTVTLKNGIEGMLMHYIEEVQGVEQV 283
>gi|255940800|ref|XP_002561169.1| Pc16g08500 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585792|emb|CAP93520.1| Pc16g08500 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 320
Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats.
Identities = 81/200 (40%), Positives = 118/200 (59%), Gaps = 11/200 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE+TPNP LKFIP VL E + + + + SPLA+++ + G+
Sbjct: 84 IFIQTENTPNPDALKFIPNHRVLPEDFPSTFLEYMSPRSTLAPPHPSPLAAKLLDVEGVT 143
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIH--NGGLGDMKLDDMGSGD 109
SV++G DFITV K +W H++P V +I + SG+ I+ G + + S
Sbjct: 144 SVFYGTDFITVTKGSDANWAHIKPEVFSIITQAVTSGETIVTTIEGAVDGEQESGEDSLS 203
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
F E D VV IKE+L+ R+RPA+ DGGDI KG+ +GIV L +RGAC C S++ TLK
Sbjct: 204 FNEDDDEVVSMIKELLETRIRPAIQEDGGDIELKGFENGIVMLKLRGACRTCDSSTVTLK 263
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ ++L H++ EVK + V
Sbjct: 264 NGIESMLMHYIEEVKGVEQV 283
>gi|225710000|gb|ACO10846.1| NFU1 iron-sulfur cluster scaffold homolog [Caligus rogercresseyi]
Length = 237
Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats.
Identities = 78/194 (40%), Positives = 116/194 (59%), Gaps = 11/194 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLV--EGAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
M+I+T++TPNP +LKF+PG VL + F A SPLA +F + G+ V+FG
Sbjct: 27 MYIRTQETPNPQSLKFLPGVRVLETAGSTLDFPTPSAAYCSPLAKLLFRVDGVKGVFFGQ 86
Query: 59 DFITVGKDQ---YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDS 115
DFIT+ K++ +W+ ++P V +M+ F SG PI++ + E
Sbjct: 87 DFITITKEEDSEVEWKVIKPEVYATLMDFFASGLPIVNE------DAKPHSDTEIHEDGD 140
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE+LD+R+RP V DGGDI+F G+ DGIV L M+G+C+ CPS+ TLK GV N+
Sbjct: 141 DTVAMIKELLDSRIRPTVQEDGGDIIFMGFEDGIVKLKMQGSCTSCPSSIVTLKNGVQNM 200
Query: 176 LNHFVPEVKDIRTV 189
L ++PEV ++ +
Sbjct: 201 LQFYIPEVIEVEQI 214
>gi|226292348|gb|EEH47768.1| HIRA interacting protein [Paracoccidioides brasiliensis Pb18]
Length = 317
Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats.
Identities = 81/199 (40%), Positives = 121/199 (60%), Gaps = 10/199 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE+TPN LKFIP VL E + + + + SPLAS++ ++ G++
Sbjct: 82 IFIQTENTPNADALKFIPNHSVLPENFPTTFLEYLSPRSTLAPPYPSPLASKLLNVDGVS 141
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-NGGLGDMKLDDMGSGDF 110
+V++G DFIT+ K +W H++P V +I E +GDPI+ + K + S +
Sbjct: 142 AVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTAGDPIVTISEAGAGSKAQEEDSLSY 201
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
E D VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ TLK
Sbjct: 202 NEDDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGIVNLKLRGACRTCDSSTVTLKN 261
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ ++L H++ EVK + V
Sbjct: 262 GIESMLMHYIEEVKGVNQV 280
>gi|154291187|ref|XP_001546179.1| NifU-like protein [Botryotinia fuckeliana B05.10]
gi|150847081|gb|EDN22274.1| NifU-like protein [Botryotinia fuckeliana B05.10]
Length = 313
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 78/200 (39%), Positives = 119/200 (59%), Gaps = 11/200 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTEDTPNP LKF+P ++ + I + N + SPLA+ + +I G+
Sbjct: 76 IFIQTEDTPNPDALKFLPNHPIIPQDVNSPFIEYLNPRSTLAPPYPSPLAASLMNIDGVK 135
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIH--NGGLGDMKLDDMGSGD 109
SV++G +FITV K + +W H++P V +I E SG I++ + ++ S
Sbjct: 136 SVFYGANFITVTKVEDANWAHIKPEVFSLITEAVTSGAQIVNITERTGASGEPEEEDSLA 195
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
+ E D VV IKE+L+ R+RPA+ DGGDI ++G+ DG+V L +RGAC C S++ TLK
Sbjct: 196 YNEDDPEVVGMIKELLETRIRPAIQEDGGDIDYRGFEDGLVKLKLRGACRTCDSSTVTLK 255
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ +L H++ EVK + V
Sbjct: 256 NGIEGMLMHYIEEVKGVVQV 275
>gi|326430239|gb|EGD75809.1| HIRA-interacting protein 5 [Salpingoeca sp. ATCC 50818]
Length = 269
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 83/190 (43%), Positives = 111/190 (58%), Gaps = 7/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT DTPNP +L F PG V G F+ + SPLA + I G+ V+ G DF
Sbjct: 61 MFIQTRDTPNPNSLMFYPGTEVTGTGTADFARGGDTSKSPLARVLLRIDGVQGVFLGPDF 120
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
IT+ K++ DW ++P + G IM+ F S P++ G + E D VV
Sbjct: 121 ITISKEEDVDWGVMKPHIFGSIMDFFASNQPVLLEGEEANAASTAS------EEDDEVVS 174
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+LD R+RPAV DGGDI+F + +GIV L + GAC GCPS+ TLK GV N+L H+
Sbjct: 175 MIKELLDTRIRPAVQDDGGDIIFMEFTNGIVKLKLSGACEGCPSSMYTLKQGVENMLMHY 234
Query: 180 VPEVKDIRTV 189
+PEV+ + V
Sbjct: 235 IPEVEGVEQV 244
>gi|225680672|gb|EEH18956.1| HIRA-interacting protein [Paracoccidioides brasiliensis Pb03]
Length = 317
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 81/199 (40%), Positives = 121/199 (60%), Gaps = 10/199 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE+TPN LKFIP VL E + + + + SPLAS++ ++ G++
Sbjct: 82 IFIQTENTPNADALKFIPNHSVLPENFPTTFLEYLSPRSTLAPPYPSPLASKLLNVDGVS 141
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-NGGLGDMKLDDMGSGDF 110
+V++G DFIT+ K +W H++P V +I E +GDPI+ + K + S +
Sbjct: 142 AVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTAGDPIVTISEAGAGSKAQEEDSLSY 201
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
E D VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ TLK
Sbjct: 202 NEDDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGIVNLKLRGACRTCDSSTVTLKN 261
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ ++L H++ EVK + V
Sbjct: 262 GIESMLMHYIEEVKGVNQV 280
>gi|307215410|gb|EFN90079.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Harpegnathos saltator]
Length = 265
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 90/192 (46%), Positives = 118/192 (61%), Gaps = 13/192 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKFIPG VL EG F NAK+A SPLA +F I G+ +++FG D
Sbjct: 56 MFIQTQDTPNPNSLKFIPGVSVLGEGCTKDFPNAKDAYCSPLAKMLFRIEGVKAIFFGPD 115
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FITV K + +W+ L+P + IM+ F SG PI+ L D V
Sbjct: 116 FITVTKLDEDIEWKLLKPEIFATIMDFFASGLPIMDESQLA-------ADTQISTDDDEV 168
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
VQ IKE+LD R+RP V DGGDI G+ +GIV L M+G+C+ CPS+ TL+ GV N++
Sbjct: 169 VQMIKELLDTRIRPTVQEDGGDI---GFEEGIVKLKMQGSCTNCPSSVVTLRNGVQNMMQ 225
Query: 178 HFVPEVKDIRTV 189
++PEV I V
Sbjct: 226 FYIPEVLGIIQV 237
>gi|258541120|ref|YP_003186553.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-01]
gi|256632198|dbj|BAH98173.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-01]
gi|256635255|dbj|BAI01224.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-03]
gi|256638310|dbj|BAI04272.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-07]
gi|256641364|dbj|BAI07319.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-22]
gi|256644419|dbj|BAI10367.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-26]
gi|256647474|dbj|BAI13415.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-32]
gi|256650527|dbj|BAI16461.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256653518|dbj|BAI19445.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-12]
Length = 186
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 99/192 (51%), Positives = 132/192 (68%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE-GAIHFSNAKE-AEISPLASRIFSIPGIASVYFGY 58
MFI+TE TPNPATLKF+PGQ V+ + G I F +A A S LA +F++PG++ V+ G
Sbjct: 1 MFIETEGTPNPATLKFLPGQAVMGDAGTIDFIDADAVAGRSSLAEALFALPGVSRVFLGN 60
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
DF++V K D DWE LRP +L +M+HF++G P++ G + D +
Sbjct: 61 DFVSVTKADSEDWEELRPQILSTLMDHFVAGHPVVAEGV-------AVTEDAIAPEDEEI 113
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +IKE+LD RVRPAVA DGGDIVF+GYR+GIV L+M+GACSGCPS+ TLK+GV N+L
Sbjct: 114 VTQIKELLDTRVRPAVAGDGGDIVFRGYRNGIVRLTMQGACSGCPSSRATLKHGVENMLR 173
Query: 178 HFVPEVKDIRTV 189
H+VPEV + V
Sbjct: 174 HYVPEVVSVEQV 185
>gi|268570156|ref|XP_002648431.1| C. briggsae CBR-LPD-8 protein [Caenorhabditis briggsae]
gi|187039912|emb|CAP21246.1| CBR-LPD-8 protein [Caenorhabditis briggsae AF16]
Length = 228
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 82/193 (42%), Positives = 119/193 (61%), Gaps = 12/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG--AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
M+IQ ++TPNP +LKF+PGQ +L + FS+A A+ SPLA ++ + G+ V+FG
Sbjct: 21 MYIQVQETPNPLSLKFLPGQQLLPDASKTYDFSSAATAKQSPLAIKLLRVDGVKRVFFGE 80
Query: 59 DFITVGKDQ--YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
DFITV K DW LRP + I +H +G +I+ + + E D+
Sbjct: 81 DFITVTKSDETVDWALLRPEIFSTIADHLQTGKSVINEASATAGEAE--------EDDNE 132
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
VV IKE+L+ R+RP V DGGDI + G+ DG+V L M+G+C+GCPS+ TLK G+ N+L
Sbjct: 133 VVMMIKEILETRIRPMVQEDGGDITYVGFDDGVVKLKMQGSCTGCPSSGVTLKNGIENML 192
Query: 177 NHFVPEVKDIRTV 189
+VPEVK++ V
Sbjct: 193 TFYVPEVKEVIEV 205
>gi|156389173|ref|XP_001634866.1| predicted protein [Nematostella vectensis]
gi|156221954|gb|EDO42803.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 119/191 (62%), Gaps = 10/191 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQ ++TPNP +LKF+PG +VL G ++F ++ A SPLA +F I G+ V FG +F
Sbjct: 1 MFIQVQETPNPNSLKFVPGVLVLESGTVNFDSSSSAHRSPLARNLFRINGVKGVMFGPEF 60
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K ++ W L+P + IM+ F S PI+ + D GS +D V
Sbjct: 61 ITVTKSDEEVQWSVLKPEIFATIMDFFSSNLPIMTE----EEPPQDTGSC----NDDDTV 112
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDI+FKG++DGIV L M+GAC+ CPS+ TLK G+ N++
Sbjct: 113 LMIKELLDTRIRPTVQEDGGDIIFKGFKDGIVKLKMQGACASCPSSIVTLKNGIENMMQF 172
Query: 179 FVPEVKDIRTV 189
++PEV + V
Sbjct: 173 YIPEVVSVEQV 183
>gi|296282499|ref|ZP_06860497.1| hypothetical protein CbatJ_02705 [Citromicrobium bathyomarinum
JL354]
Length = 192
Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats.
Identities = 84/191 (43%), Positives = 131/191 (68%), Gaps = 3/191 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M+I+TE TPNPATLKF+P + V+ +G F+N ++AE SPLA +F + V+FG DF
Sbjct: 1 MYIETETTPNPATLKFLPQRQVMPQGTRDFANPEDAEASPLAQALFDTGEVTGVFFGSDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES--DSAV 117
++V K + W L+P ++ ++++HF+S P+ H G +++ + E D+ +
Sbjct: 61 VSVTKGEGTQWTELKPQIVAVLLDHFVSEAPLFHGGSAAGIEVPAEDTLTVEEDPADADI 120
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +IKE+L+ R+RPAVA DGGDI ++GYRDG+V L ++GAC GCPS++ TLK+G+ +L
Sbjct: 121 VDQIKELLETRIRPAVAGDGGDIAYRGYRDGVVHLQLQGACDGCPSSTATLKHGIEGLLK 180
Query: 178 HFVPEVKDIRT 188
H+VPEV ++R
Sbjct: 181 HYVPEVVEVRA 191
>gi|83944990|ref|ZP_00957356.1| nifU domain protein [Oceanicaulis alexandrii HTCC2633]
gi|83851772|gb|EAP89627.1| nifU domain protein [Oceanicaulis alexandrii HTCC2633]
Length = 186
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 94/192 (48%), Positives = 125/192 (65%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTEDTPNP TLKF+PGQ V ++ F+ +EAE S LA +F + G+ V+ G DF
Sbjct: 1 MFIQTEDTPNPDTLKFLPGQSVSLDAPRDFATPEEAESSYLARELFRVEGVIRVFAGQDF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I+V K + DW H++P VLG IM+ SG + + DD G + + +V+
Sbjct: 61 ISVTKAEGVDWPHIKPAVLGAIMDCLESGKSLFSDA-------DDDGHAAYEGEAAGIVK 113
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILN 177
IK+V+D RVRPAVARDGGDIVF Y + G+V L MRGAC+GCPS++ TLK G+ N+L
Sbjct: 114 EIKDVIDTRVRPAVARDGGDIVFHSYDEATGVVNLHMRGACAGCPSSTMTLKQGIENLLK 173
Query: 178 HFVPEVKDIRTV 189
H+VPEV + V
Sbjct: 174 HYVPEVSSVEAV 185
>gi|58039243|ref|YP_191207.1| NifU protein [Gluconobacter oxydans 621H]
gi|58001657|gb|AAW60551.1| NifU protein [Gluconobacter oxydans 621H]
Length = 212
Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats.
Identities = 94/192 (48%), Positives = 123/192 (64%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE-GAIHFSNAK-EAEISPLASRIFSIPGIASVYFGY 58
MFI+TEDTPNPATLKF+PG+ V + + F +A A S LAS +F P + V+ G
Sbjct: 26 MFIETEDTPNPATLKFLPGRSVTGDARPVDFGDADVAAGRSELASALFDQPNVRRVFLGG 85
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
DF++V K D W L+P VLG I F SG P++ D D+ V
Sbjct: 86 DFVSVTKSDDISWGDLKPVVLGTITTFFESGRPVLSG-------TQAAPEHDVSPEDAEV 138
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V RI+++LD RVRPAVA DGGDI F+GY+DG+V+L+M+GACSGCPS+ TLK+GV N+L
Sbjct: 139 VSRIQDLLDTRVRPAVAGDGGDIAFRGYKDGVVYLAMQGACSGCPSSRATLKHGVENMLR 198
Query: 178 HFVPEVKDIRTV 189
H+VPEV + V
Sbjct: 199 HYVPEVASVEQV 210
>gi|327348799|gb|EGE77656.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis ATCC 18188]
Length = 318
Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats.
Identities = 79/199 (39%), Positives = 120/199 (60%), Gaps = 10/199 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEAEI----SPLASRIFSIPGIA 52
+FIQTE TPN LKF P VL E + + + + SPLA+++ ++ G++
Sbjct: 82 IFIQTETTPNADALKFNPNHPVLPENFPTSFVEYLSPRSTLTPPYPSPLAAKLLNVDGVS 141
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDM-KLDDMGSGDF 110
+V++G DFIT+ K +W H++P V +I E +G+PII+ G + S +
Sbjct: 142 AVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTTGEPIINVAEAGAGGPPPEEDSLSY 201
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
E D VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ TLK
Sbjct: 202 NEDDDEVVSMIKELLETRIRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKN 261
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ ++L H++ EVK++ V
Sbjct: 262 GIESMLMHYIEEVKEVNHV 280
>gi|90420546|ref|ZP_01228453.1| putative nitrogen-fixing NifU domain protein [Aurantimonas
manganoxydans SI85-9A1]
gi|90335274|gb|EAS49027.1| putative nitrogen-fixing NifU domain protein [Aurantimonas
manganoxydans SI85-9A1]
Length = 191
Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats.
Identities = 98/180 (54%), Positives = 129/180 (71%), Gaps = 3/180 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNPATLKF+PG+VVL G F + ++A SPLA+R+ +PG+ V+FGYD
Sbjct: 1 MFIQTEVTPNPATLKFLPGRVVLESGTEEFLSKEDAANRSPLAARLMDVPGVTGVFFGYD 60
Query: 60 FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
F+TV KD DW+HL+P +L +MEHF+ +P++ G D G F D V
Sbjct: 61 FVTVSKDGPDWQHLKPAILAGLMEHFMGNEPVMTAQGSNAAMPD--GEEFFEPGDEGTVA 118
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+L+ RVRPAVA+DGGDI F+GYRDG V+L+MRGAC+GCPS++ TLK+G+ N+L HF
Sbjct: 119 TIKELLETRVRPAVAQDGGDITFRGYRDGTVYLNMRGACAGCPSSTATLKHGIQNLLRHF 178
>gi|225711844|gb|ACO11768.1| NFU1 iron-sulfur cluster scaffold homolog [Lepeophtheirus salmonis]
Length = 238
Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats.
Identities = 80/194 (41%), Positives = 117/194 (60%), Gaps = 11/194 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLV--EGAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
M+I+T++TPNP +LKF+PG VL I F A SPLA +F + G+ V+FG
Sbjct: 29 MYIRTQETPNPQSLKFLPGVPVLETAGSTIDFPQPSAAFCSPLAKLLFRVEGVKGVFFGP 88
Query: 59 DFITVGKDQ---YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDS 115
DFIT+ K++ +W+ ++P + IM+ F SG PI++ + E D
Sbjct: 89 DFITITKEEEVNAEWKLMKPLIYATIMDFFASGLPIVNE------DAKPHSDTEIHEDDD 142
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE+LD+R+RP V DGGDIVF G+ DG+V L M+G+C+ CPS+ TLK GV N+
Sbjct: 143 DTVAMIKELLDSRIRPTVQEDGGDIVFMGFDDGVVKLKMQGSCTSCPSSIVTLKNGVQNM 202
Query: 176 LNHFVPEVKDIRTV 189
L ++PEV ++ +
Sbjct: 203 LQFYIPEVLEVEQI 216
>gi|4836948|gb|AAD30650.1|AC006085_23 Similar to human CGI-33 protein [Arabidopsis thaliana]
Length = 304
Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats.
Identities = 85/220 (38%), Positives = 119/220 (54%), Gaps = 37/220 (16%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIP----------- 49
MFIQT+ TPNP++L F PG+ V+ G+ F N++ A SPLA IF+I
Sbjct: 75 MFIQTQSTPNPSSLMFSPGKPVMEIGSADFPNSRSAMSSPLAKAIFAIDGIPRLLLQHTI 134
Query: 50 ------------------GIASVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDP 90
G+ V++G DF+TV K D W+ L+P + ++M+ + SG P
Sbjct: 135 VSSSYNPCFVTKIVSVDAGVVRVFYGSDFVTVTKSDDVTWDILKPDIFAVVMDFYSSGQP 194
Query: 91 IIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDG 148
+ + K E DS V IKE+L+ R+RP+V DGGDI + G+ G
Sbjct: 195 LFLDSQATAAK-----DTAIHEDDSETVAMIKELLETRIRPSVQDDGGDIEYCGFDTETG 249
Query: 149 IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
IV L M+GACSGCPS+S TLK G+ N+L H+V EVK +
Sbjct: 250 IVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGVEQ 289
>gi|331214376|ref|XP_003319869.1| iron-sulfur cluster scaffold protein Nfu [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309298859|gb|EFP75450.1| iron-sulfur cluster scaffold protein Nfu [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 357
Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats.
Identities = 78/193 (40%), Positives = 117/193 (60%), Gaps = 6/193 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+FIQTE TPN LKFIPG+ V+ G+ F + SPLA + S+ G+ SV+FG DF
Sbjct: 139 IFIQTEPTPNADALKFIPGRPVMKSGSREFLKGDDTRSSPLARSLLSVEGVKSVFFGPDF 198
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFI-SGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
I++ K+ + W ++P + ++ME F S P++ G + + + DS VV
Sbjct: 199 ISINKESEVGWPTMKPEIYSLLMEFFSASDRPVVQEGPIEE--ESGPLDTRIHDDDSEVV 256
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+LD RVRPA+ DGGD+ +KG+ G+V L ++G+C GC S++ TLK G+ +L
Sbjct: 257 AMIKELLDTRVRPAIQEDGGDLEYKGFNEETGVVQLMLKGSCRGCDSSAVTLKSGIERML 316
Query: 177 NHFVPEVKDIRTV 189
H+VPEV+ + V
Sbjct: 317 MHYVPEVQCVEQV 329
>gi|261194942|ref|XP_002623875.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis SLH14081]
gi|239587747|gb|EEQ70390.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis SLH14081]
Length = 318
Score = 250 bits (640), Expect = 5e-65, Method: Composition-based stats.
Identities = 79/199 (39%), Positives = 120/199 (60%), Gaps = 10/199 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEAEI----SPLASRIFSIPGIA 52
+FIQTE TPN LKF P VL E + + + + SPLA+++ ++ G++
Sbjct: 82 IFIQTETTPNADALKFNPNHPVLPENFPTSFVEYLSPRSTLTPPYPSPLAAKLLNVDGVS 141
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDM-KLDDMGSGDF 110
+V++G DFIT+ K +W H++P V +I E +G+PII+ G + S +
Sbjct: 142 AVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTTGEPIINVAEAGAGGPPPEEDSLSY 201
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
E D VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ TLK
Sbjct: 202 NEDDDEVVSMIKELLETRIRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKN 261
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ ++L H++ EVK++ V
Sbjct: 262 GIESMLMHYIEEVKEVNHV 280
>gi|239610759|gb|EEQ87746.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis ER-3]
Length = 318
Score = 250 bits (640), Expect = 6e-65, Method: Composition-based stats.
Identities = 79/199 (39%), Positives = 120/199 (60%), Gaps = 10/199 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEAEI----SPLASRIFSIPGIA 52
+FIQTE TPN LKF P VL E + + + + SPLA+++ ++ G++
Sbjct: 82 IFIQTETTPNADALKFNPNHPVLPENFPTSFVEYLSPRSTLTPPYPSPLAAKLLNVDGVS 141
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDM-KLDDMGSGDF 110
+V++G DFIT+ K +W H++P V +I E +G+PII+ G + S +
Sbjct: 142 AVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTTGEPIINVAEAGAGGPPPEEDSLSY 201
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
E D VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ TLK
Sbjct: 202 NEDDDEVVSMIKELLETRIRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKN 261
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ ++L H++ EVK++ V
Sbjct: 262 GIESMLMHYIEEVKEVNHV 280
>gi|325303172|tpg|DAA34414.1| TPA_inf: NifU-like domain-containing protein [Amblyomma variegatum]
Length = 217
Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats.
Identities = 76/175 (43%), Positives = 111/175 (63%), Gaps = 5/175 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP LKF+P VL +G F N A+ SPLA +F + G+ +V+ G DF
Sbjct: 46 MFIQTQDTPNPNCLKFLPNAKVLEQGTRDFPNIGSAKNSPLARHLFRVEGVKAVFLGPDF 105
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K D+ +W+ ++P + IM+ F +G P++ +G +D E DS V
Sbjct: 106 ITVTKVDDETEWKVIKPHIFAAIMDFFTTGLPVLDDGSASTQVSED---TQPREGDSETV 162
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
IKE+++ R+RP V DGGDI++ G+ DG+V L ++G+C+GCPS+S TLK G+
Sbjct: 163 LAIKELIETRIRPTVQEDGGDILYMGFEDGVVKLKLQGSCTGCPSSSVTLKAGIQ 217
>gi|114799747|ref|YP_759252.1| NifU domain-containing protein [Hyphomonas neptunium ATCC 15444]
gi|114739921|gb|ABI78046.1| NifU domain protein [Hyphomonas neptunium ATCC 15444]
Length = 192
Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats.
Identities = 87/192 (45%), Positives = 121/192 (63%), Gaps = 6/192 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE-GAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPNP T+KF+PGQ V+ + G F +A A S LA +F + G+ V+ G D
Sbjct: 1 MFIQTEATPNPDTIKFLPGQPVVGDRGPFDFPDAASARTSLLARALFQVEGVERVFLGSD 60
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+++ K DW H++P VL IM+H++SG P+I G D ++ + +V
Sbjct: 61 FVSINKAQDKDWRHVKPMVLAAIMDHYMSGLPVIEEGTSSASSGAD--ETEYEGETAEIV 118
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+++ RVRPAVA+DGGDI F + GIV LSMRGAC+GCPS++ TLK G+ N+L
Sbjct: 119 NEIKELIETRVRPAVAQDGGDITFHRFDADTGIVHLSMRGACAGCPSSTMTLKQGIENML 178
Query: 177 NHFVPEVKDIRT 188
+VPEV +
Sbjct: 179 RTYVPEVTAVEA 190
>gi|62202252|gb|AAH92870.1| Zgc:110319 [Danio rerio]
gi|182890178|gb|AAI64833.1| Zgc:110319 [Danio rerio]
Length = 256
Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats.
Identities = 78/189 (41%), Positives = 114/189 (60%), Gaps = 10/189 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I T+DTPNP +LKF+PG+ VL G F + AE SPLA +F I GI SV++G DFIT
Sbjct: 54 ILTQDTPNPRSLKFLPGKPVLGSGTQDFPTSASAESSPLARDLFQISGIKSVFYGPDFIT 113
Query: 63 VGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+ K D +W ++ + +I + F G+ I + + E D +V
Sbjct: 114 LTKTDDDVEWTDIKRHAIEVIRKFFEGGEAITTGAAHAESSVT--------EDDDEIVSL 165
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+LD R+RP V DGGD++FKG+ DG V L + G+C+GCPS++ TLK G+ N++ ++
Sbjct: 166 IKELLDTRIRPTVQEDGGDVIFKGFEDGTVKLKLVGSCTGCPSSTVTLKNGIQNMMQFYI 225
Query: 181 PEVKDIRTV 189
PEV ++ V
Sbjct: 226 PEVDNVEQV 234
>gi|225707504|gb|ACO09598.1| HIRA-interacting protein 5 [Osmerus mordax]
Length = 263
Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats.
Identities = 82/189 (43%), Positives = 115/189 (60%), Gaps = 11/189 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
IQT+DTPNP +LKF+PG+ VL G + F + AE S LA +F I G+ SV+FG DFIT
Sbjct: 62 IQTQDTPNPRSLKFLPGKPVLGTGTLDFPTPQNAECSSLAKDLFEIEGVKSVFFGPDFIT 121
Query: 63 VGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
V K D +W +++ + I + F SG PI + + D +V
Sbjct: 122 VTKADDDVEWTNIKRHAVEAITKFFDSGAPITTGVSHHESSHSE---------DDEIVSI 172
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+LD R+RP V DGGD++FKG+ DG V L + G+C+GCPS+S TL+ G+ N+L ++
Sbjct: 173 IKELLDTRIRPTVQEDGGDVIFKGFEDGTVKLKLVGSCTGCPSSSVTLRNGIQNMLQFYI 232
Query: 181 PEVKDIRTV 189
PEV D+ V
Sbjct: 233 PEVDDVEQV 241
>gi|17541876|ref|NP_501917.1| LiPid Depleted family member (lpd-8) [Caenorhabditis elegans]
gi|3879150|emb|CAA94609.1| C. elegans protein R10H10.1, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 222
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 83/193 (43%), Positives = 119/193 (61%), Gaps = 13/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG--AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
M+IQ ++TPNP +LKF+PGQ +L + FS+A A+ SPLA ++ + G+ V+FG
Sbjct: 16 MYIQVQETPNPLSLKFLPGQQLLPDASKTYDFSSAATAKQSPLAIKLLRVDGVKRVFFGE 75
Query: 59 DFITVGKDQ--YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
DF+TV K DW LRP + I +H +G P+I+ D +E D
Sbjct: 76 DFVTVTKSDETVDWALLRPEIFSTIADHIQTGKPVINEAATVS---------DQVEEDDE 126
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
VV IKE+L+ R+RP V DGGDI + G+ DG+V L M+G+C+GCPS+ TLK G+ N+L
Sbjct: 127 VVMMIKEILETRIRPMVQEDGGDITYVGFDDGVVKLKMQGSCTGCPSSGVTLKNGIENML 186
Query: 177 NHFVPEVKDIRTV 189
+VPEVK++ V
Sbjct: 187 TFYVPEVKEVIEV 199
>gi|213624625|gb|AAI71359.1| Zgc:110319 [Danio rerio]
Length = 256
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 78/189 (41%), Positives = 114/189 (60%), Gaps = 10/189 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I T+DTPNP +LKF+PG+ VL G F + AE SPLA +F I GI SV++G DFIT
Sbjct: 54 ILTQDTPNPRSLKFLPGKPVLGTGTQDFPTSASAESSPLARDLFQISGIKSVFYGPDFIT 113
Query: 63 VGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+ K D +W ++ + +I + F G+ I + + E D +V
Sbjct: 114 LTKTDDDVEWTDIKRHAIEVIRKFFEGGEAITTGAAHAESSVT--------EDDDEIVSL 165
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+LD R+RP V DGGD++FKG+ DG V L + G+C+GCPS++ TLK G+ N++ ++
Sbjct: 166 IKELLDTRIRPTVQEDGGDVIFKGFEDGTVKLKLVGSCTGCPSSTVTLKNGIQNMMQFYI 225
Query: 181 PEVKDIRTV 189
PEV ++ V
Sbjct: 226 PEVDNVEQV 234
>gi|242802638|ref|XP_002484011.1| NifU-related protein [Talaromyces stipitatus ATCC 10500]
gi|218717356|gb|EED16777.1| NifU-related protein [Talaromyces stipitatus ATCC 10500]
Length = 290
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 78/194 (40%), Positives = 115/194 (59%), Gaps = 14/194 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE TPNP LKF+P VL E + + + + SPLA+++ ++ G++
Sbjct: 81 IFIQTESTPNPDALKFLPNHRVLPENFPTPFLEYLSPRSTLAPPHPSPLAAKLLNVEGVS 140
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG--- 108
SV++G DFITV K +W H++P V +I E SG+PI++ D G
Sbjct: 141 SVFYGPDFITVTKQSDVNWAHIKPEVFSLITEVVTSGEPIVNTVERTSGAQDAQEGGGED 200
Query: 109 --DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ E D VV IKE+L+ R+RPA+ DGGDI F+G+ +GIV L +RGAC C S++
Sbjct: 201 TLSYNEEDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFENGIVLLKLRGACRTCDSSTV 260
Query: 167 TLKYGVANILNHFV 180
TLK G+ ++L H+V
Sbjct: 261 TLKNGIESMLMHYV 274
>gi|308492754|ref|XP_003108567.1| CRE-LPD-8 protein [Caenorhabditis remanei]
gi|308248307|gb|EFO92259.1| CRE-LPD-8 protein [Caenorhabditis remanei]
Length = 223
Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 81/193 (41%), Positives = 121/193 (62%), Gaps = 12/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG--AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
M+IQ ++TPNP +LKF+PGQ +L + F++A A+ SPLA ++ + G+ V+FG
Sbjct: 16 MYIQVQETPNPLSLKFLPGQQLLPDASKTYDFNSAAAAKQSPLAVKLLRVDGVKRVFFGE 75
Query: 59 DFITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
DF+TV K + DW LRP + I +H +G P+I+ D + + D+
Sbjct: 76 DFVTVTKADEHVDWALLRPEIFSTIADHLQTGKPVINEVAATDGEAEV--------EDNE 127
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
VV IKE+L+ R+RP V DGGDI + G+ DG+V L M+G+C+GCPS+ TLK G+ N+L
Sbjct: 128 VVMMIKEILETRIRPMVQEDGGDITYVGFDDGVVKLKMQGSCTGCPSSGVTLKNGIENML 187
Query: 177 NHFVPEVKDIRTV 189
+VPEVK++ V
Sbjct: 188 TFYVPEVKEVIEV 200
>gi|170084143|ref|XP_001873295.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650847|gb|EDR15087.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 212
Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 79/193 (40%), Positives = 119/193 (61%), Gaps = 6/193 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPN +LKFI G V+ +G F + + A ISPLA R+ + G++ V++G DF
Sbjct: 1 MFIQTETTPNEDSLKFILGVPVMGDGTAEFLDTRSALISPLAIRLMGVEGVSGVFYGPDF 60
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV KD ++ W ++P + +IME F SG + + + +++DS V
Sbjct: 61 VTVSKDSEHRWAVVKPEIYSIIMEFFSSGQKLFRTDE--EREQAGPQDTRILDTDSETVA 118
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYR---DGIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+L+ RVRPA+ DGGDI F+G+ D +V + ++G+C GC S++ TLK G+ +L
Sbjct: 119 MIKELLETRVRPAIMEDGGDIEFRGFDEEGDRLVKVKLKGSCRGCDSSTVTLKSGIERML 178
Query: 177 NHFVPEVKDIRTV 189
H+VPEVK + V
Sbjct: 179 MHYVPEVKGVEQV 191
>gi|321470871|gb|EFX81846.1| hypothetical protein DAPPUDRAFT_49825 [Daphnia pulex]
Length = 206
Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 86/192 (44%), Positives = 123/192 (64%), Gaps = 11/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPG-QVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MF+QT+DTPNP +LKF+PG QVVL + F A+ SPLA +F I G+ SV+ G D
Sbjct: 1 MFVQTQDTPNPNSLKFLPGVQVVLESETMDFPTLSSAQCSPLAKLLFRIEGVKSVFLGPD 60
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FIT+ K ++ DW+ ++ V IM+ F SG P+++ G + E D+
Sbjct: 61 FITITKIDEETDWKTIKAEVFATIMDFFTSGLPVVNEGIN--------QPDNGNEEDNDT 112
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V IKE+LD+R+RP V DGGD+VFKG++DGIV+L ++G+C+ CPS+ TLK GV N+L
Sbjct: 113 VLMIKELLDSRIRPTVQEDGGDLVFKGFKDGIVYLKLQGSCTSCPSSMVTLKNGVQNMLQ 172
Query: 178 HFVPEVKDIRTV 189
++PEV + V
Sbjct: 173 FYIPEVIAVEQV 184
>gi|328872467|gb|EGG20834.1| NIF system FeS cluster assembly domain-containing protein
[Dictyostelium fasciculatum]
Length = 313
Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats.
Identities = 75/190 (39%), Positives = 116/190 (61%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+FIQTE TPNP +LKF+PG V+ +G + F + K ++ISPLA+ IF + G+ V+FG F
Sbjct: 104 IFIQTETTPNPDSLKFLPGVEVMEQGTVDFPDFKSSQISPLANAIFKLDGVNRVFFGPSF 163
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I+V K + +W L+P V G I+ + SG P++ + + D VV
Sbjct: 164 ISVNKFTETEWSILKPQVYGAIINFYHSGQPLLLEKPSA-----ENNDTLILPEDDEVVA 218
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+++ R+RP + DGG+I + G++DGIV + ++G CS C S+ TLK G+ +L H+
Sbjct: 219 MIKELIETRIRPTLLDDGGNIQYLGFKDGIVLVKLQGTCSSCSSSQATLKGGIERMLMHW 278
Query: 180 VPEVKDIRTV 189
+ EV+ I V
Sbjct: 279 ISEVRGIMAV 288
>gi|330922033|ref|XP_003299669.1| hypothetical protein PTT_10711 [Pyrenophora teres f. teres 0-1]
gi|311326592|gb|EFQ92266.1| hypothetical protein PTT_10711 [Pyrenophora teres f. teres 0-1]
Length = 243
Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats.
Identities = 84/202 (41%), Positives = 120/202 (59%), Gaps = 13/202 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
MFIQTE TPN LKF P Q VL E + + N + SPLA+++ +I G+
Sbjct: 1 MFIQTEPTPNADALKFNPNQRVLPENISSPFLEYLNPRSTLAPPHPSPLAAQLMNIDGVT 60
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKL----DDMGS 107
SV+FG D+ITV KD W H++P V +I E+ SG PI++ + + S
Sbjct: 61 SVFFGADYITVTKDSSTPWAHVKPEVFALINEYMTSGQPIVNTVAAKAGEQGQGGQENDS 120
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASET 167
+ E+D V+ IKE+L+ RVRPA+ DGGDI F+G+ DG V L +RGAC C S++ T
Sbjct: 121 LAYDENDDEVIGMIKELLETRVRPAIQEDGGDIEFRGFNDGQVLLKLRGACRTCDSSTVT 180
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
LK G+ ++L H++ EVK ++ V
Sbjct: 181 LKNGIESMLMHYIEEVKGVQQV 202
>gi|145605625|ref|XP_370496.2| NifU-related protein [Magnaporthe oryzae 70-15]
gi|145013431|gb|EDJ98072.1| NifU-related protein [Magnaporthe oryzae 70-15]
Length = 319
Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats.
Identities = 83/205 (40%), Positives = 120/205 (58%), Gaps = 16/205 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE TPN LKF+P VL E I + N + SPLA+++ +I G+
Sbjct: 74 IFIQTEPTPNSDALKFLPNHRVLPEDISTPFIEYLNPRSTIAPPYPSPLAAQLMNIDGVQ 133
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIH-------NGGLGDMKLDD 104
SV++G DFITV K +W H+RP + +I E SG I++ +G G +
Sbjct: 134 SVFYGADFITVTKASDANWAHIRPEIFSLITEAITSGQKIVNIVERTDASGEDGQETSGE 193
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSA 164
+ S + E+DS VV IKE+L+ R+RPA+ DGGDI F+G+ DG V L +RGAC C S+
Sbjct: 194 VDSLSYNENDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGNVLLKLRGACRTCDSS 253
Query: 165 SETLKYGVANILNHFVPEVKDIRTV 189
+ TLK G+ +L H++ EV+ + V
Sbjct: 254 TVTLKNGIEGMLMHYIEEVQGVIQV 278
>gi|41351250|gb|AAH65889.1| Zgc:110319 protein [Danio rerio]
Length = 255
Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 78/189 (41%), Positives = 114/189 (60%), Gaps = 10/189 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I T+DTPNP +LKF+PG+ VL G F + AE SPLA +F I GI SV++G DFIT
Sbjct: 53 ILTQDTPNPRSLKFLPGKPVLGTGTQDFPTSASAESSPLARDLFQISGIKSVFYGPDFIT 112
Query: 63 VGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+ K D +W ++ + +I + F G+ I + + E D +V
Sbjct: 113 LTKTDDDVEWTDIKRHAIEVISKFFEGGEAITTGAAHAESSVT--------EDDDEIVSL 164
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+LD R+RP V DGGD++FKG+ DG V L + G+C+GCPS++ TLK G+ N++ ++
Sbjct: 165 IKELLDTRIRPTVQEDGGDVIFKGFEDGTVKLKLVGSCTGCPSSTVTLKNGIQNMMQFYI 224
Query: 181 PEVKDIRTV 189
PEV ++ V
Sbjct: 225 PEVDNVEQV 233
>gi|324120927|ref|NP_001018093.2| NFU1 iron-sulfur cluster scaffold homolog [Danio rerio]
gi|220678983|emb|CAX14770.1| novel protein similar to HIRA interacting protein 5 (hirip5,
zgc:110319) [Danio rerio]
Length = 256
Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats.
Identities = 78/189 (41%), Positives = 114/189 (60%), Gaps = 10/189 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I T+DTPNP +LKF+PG+ VL G F + AE SPLA +F I GI SV++G DFIT
Sbjct: 54 ILTQDTPNPRSLKFLPGKPVLGTGTQDFPTSASAESSPLARDLFQISGIKSVFYGPDFIT 113
Query: 63 VGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+ K D +W ++ + +I + F G+ I + + E D +V
Sbjct: 114 LTKTDDDVEWTDIKRHAIEVISKFFEGGEAITTGAAHAESSVT--------EDDDEIVSL 165
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IKE+LD R+RP V DGGD++FKG+ DG V L + G+C+GCPS++ TLK G+ N++ ++
Sbjct: 166 IKELLDTRIRPTVQEDGGDVIFKGFEDGTVKLKLVGSCTGCPSSTVTLKNGIQNMMQFYI 225
Query: 181 PEVKDIRTV 189
PEV ++ V
Sbjct: 226 PEVDNVEQV 234
>gi|46107542|ref|XP_380830.1| hypothetical protein FG00654.1 [Gibberella zeae PH-1]
Length = 304
Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats.
Identities = 81/202 (40%), Positives = 120/202 (59%), Gaps = 13/202 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE+TPNP LKF+P V+ E I + N + SPLA+++ +I G+
Sbjct: 74 IFIQTENTPNPDALKFLPNHRVVPEEFSTPFIEYLNPRATISPPHPSPLAAKLMNIDGVT 133
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD-- 109
SV++G DFITV K +W H+RP + +I E +G+ I+ + + D
Sbjct: 134 SVFYGADFITVTKAADANWAHIRPEIFALITEAITAGEQIVTISERREGEAGAPVEEDSL 193
Query: 110 -FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASET 167
+ E+DS VV IKE+L+ R+RPA+ DGGDI F+G+ D G V L +RGAC C S++ T
Sbjct: 194 AYNENDSEVVGMIKELLETRIRPAIQEDGGDIDFRGFDDEGYVHLRLRGACRTCDSSTVT 253
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
LK G+ +L H++ EVK ++ V
Sbjct: 254 LKNGIEGMLMHYIEEVKGVKQV 275
>gi|145344446|ref|XP_001416743.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576969|gb|ABO95036.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 206
Score = 247 bits (630), Expect = 7e-64, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 122/191 (63%), Gaps = 9/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +L F PG+ V EG+ +FSNA+EA SPLA R+F+I G+ +V+FG DF
Sbjct: 1 MFIQTQTTPNPMSLMFQPGREVYAEGSKNFSNAREAMASPLAKRLFAIEGVTNVFFGIDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + +WE ++P I + SG+ ++ L E D +V
Sbjct: 61 VTVTKGEDAEWETVKPQTFEAITNFYASGETVMDEEKLAASGTA------IAEDDDEIVA 114
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ R+RPAVA DGGDIVFK + G+V + ++G+C GCPS+S TLK G+ N+L
Sbjct: 115 MIKELLETRIRPAVAEDGGDIVFKAFDPESGLVTVQLQGSCDGCPSSSVTLKSGIENMLM 174
Query: 178 HFVPEVKDIRT 188
H+VPEVK +
Sbjct: 175 HYVPEVKGVVQ 185
>gi|240279904|gb|EER43409.1| HIRA-interacting protein [Ajellomyces capsulatus H143]
gi|325093032|gb|EGC46342.1| HIRA-interacting protein [Ajellomyces capsulatus H88]
Length = 314
Score = 247 bits (630), Expect = 8e-64, Method: Composition-based stats.
Identities = 78/199 (39%), Positives = 118/199 (59%), Gaps = 10/199 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEAEI----SPLASRIFSIPGIA 52
+FIQTE TPN LKF P VL E + + + + SPLA+++ ++ G++
Sbjct: 79 IFIQTETTPNADALKFNPNHPVLPENFPTSFVEYLSPRSTLTPPYPSPLAAKLLNVDGVS 138
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-NGGLGDMKLDDMGSGDF 110
+V++G DFIT+ K +W H++P V +I E +G+PII+ + S +
Sbjct: 139 AVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTTGEPIINVAEAGAGAGPAEEDSLSY 198
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
E D VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ TLK
Sbjct: 199 NEDDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKN 258
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ ++L H++ EVK + V
Sbjct: 259 GIESMLMHYIEEVKGVNHV 277
>gi|324510498|gb|ADY44390.1| NFU1 iron-sulfur cluster scaffold [Ascaris suum]
Length = 213
Score = 246 bits (629), Expect = 9e-64, Method: Composition-based stats.
Identities = 84/193 (43%), Positives = 126/193 (65%), Gaps = 8/193 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG--AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
MFIQ ++TPNP TLKF+PG+ VL G + F++ A+ SPLA ++F + G+ S++FG
Sbjct: 1 MFIQVQETPNPLTLKFLPGEPVLGPGRGTMDFTSVSAAKRSPLALQLFRVDGVKSIFFGE 60
Query: 59 DFITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
DFITV K ++ DW ++P + IM+ +G I+++G + D +D D
Sbjct: 61 DFITVTKADEETDWAVMKPEIFATIMDFLQTGKAIVNDGEVPDGPMD----TMIHPEDDD 116
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V IKE+L++RV+P V DGGDI++KG+ DGIV L ++G+C+GCPS+ TLK G+ N+L
Sbjct: 117 TVAMIKELLESRVKPMVQEDGGDIIYKGFHDGIVHLKLKGSCTGCPSSLVTLKSGIKNML 176
Query: 177 NHFVPEVKDIRTV 189
+VPEV D+ V
Sbjct: 177 QFYVPEVVDVIEV 189
>gi|332028326|gb|EGI68373.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Acromyrmex echinatior]
Length = 211
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 86/192 (44%), Positives = 117/192 (60%), Gaps = 12/192 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKFIPG VL EG F +AK+A SPLA +F I G+ +++FG D
Sbjct: 1 MFIQTQDTPNPNSLKFIPGVSVLGEGCTKDFPSAKDAYCSPLAKMLFRIEGVKAIFFGPD 60
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FITV K + +W+ L+P + IM+ F SG P++ D V
Sbjct: 61 FITVTKVDEDVEWKLLKPEIFATIMDFFASGLPVMDEAS------QPAADTQINAEDDEV 114
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
VQ IKE+LD R+RP V DGGDI G+ +GIV L M+G+C+ CPS+ TL+ GV N++
Sbjct: 115 VQMIKELLDTRIRPTVQEDGGDI---GFEEGIVKLKMQGSCTNCPSSVVTLRNGVQNMMQ 171
Query: 178 HFVPEVKDIRTV 189
++PEV + V
Sbjct: 172 FYIPEVLGVIQV 183
>gi|85709112|ref|ZP_01040178.1| possible NifU-like domain protein [Erythrobacter sp. NAP1]
gi|85690646|gb|EAQ30649.1| possible NifU-like domain protein [Erythrobacter sp. NAP1]
Length = 193
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 81/192 (42%), Positives = 130/192 (67%), Gaps = 4/192 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+TE TPNP++LKF+PG+ V+ G F++ + AE SPLA IF + +V++G+DF
Sbjct: 1 MFIETETTPNPSSLKFLPGRAVMPSGTREFASPEAAEASPLAQAIFDTGEVVNVFYGWDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG---DFIESDSA 116
+TV DW L+P V ++++HF+S P+ G + + + + E D+
Sbjct: 61 VTVTAAPGVDWSALKPQVHAILLDHFVSEAPLFVGGTADGISVPPEEAEMVVEDREEDAE 120
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++ I E+L+ RVRPAVA DGGDI ++G+ DG+V+L+++GAC+GCPS++ TLK+G+ ++L
Sbjct: 121 IIASINELLETRVRPAVAGDGGDIAYRGFSDGVVYLTLQGACAGCPSSTATLKHGIESLL 180
Query: 177 NHFVPEVKDIRT 188
H+VPEV ++R
Sbjct: 181 KHYVPEVVEVRA 192
>gi|312070286|ref|XP_003138076.1| hypothetical protein LOAG_02490 [Loa loa]
gi|307766755|gb|EFO25989.1| hypothetical protein LOAG_02490 [Loa loa]
Length = 220
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 85/193 (44%), Positives = 126/193 (65%), Gaps = 8/193 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG--AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
MFIQ +TPNPATLKFIPG++++ +G + F N A+ SPLA +F I G+ SV+FG
Sbjct: 1 MFIQVHETPNPATLKFIPGRMIMGKGRGTLDFGNFLSAKRSPLAMELFRINGVKSVFFGE 60
Query: 59 DFITVGKDQY--DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
D++T+ K DW L+P + ++M++ S PII G + D + DS
Sbjct: 61 DYVTITKQNEVDDWALLKPEIFAVLMDYLQSEKPIISEGEMPKGPED----TEIHPEDSD 116
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V IKE+L+ R++P V DGGD+++KG+ DG+V L M+G+C+GCPS+S TL++G+ N+L
Sbjct: 117 TVAMIKELLECRIKPMVQEDGGDVIYKGFHDGVVHLKMQGSCTGCPSSSVTLQFGIKNML 176
Query: 177 NHFVPEVKDIRTV 189
+VPEVKD+ V
Sbjct: 177 QFYVPEVKDVLEV 189
>gi|320170179|gb|EFW47078.1| TO42 [Capsaspora owczarzaki ATCC 30864]
Length = 280
Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats.
Identities = 78/190 (41%), Positives = 115/190 (60%), Gaps = 10/190 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKF+PG V+ G F++++ A SPLA ++ I G+ V+F F
Sbjct: 65 MFIQTQDTPNPNSLKFMPGVTVVDAGTYDFADSRAAATSPLARQLLRIQGVNRVFFAQKF 124
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I++ K D+ +W L+P + IM+ F SG P++ + + V
Sbjct: 125 ISINKADEAEWPVLKPEIYATIMDFFASGLPVVEAPKTTEEAATEENET---------VS 175
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+LD+R+RP V DGGDI FK + +G+V L + G+CS CPS+ TL GV+N+L H+
Sbjct: 176 MIKELLDSRIRPMVQEDGGDIEFKSFENGVVKLKLIGSCSTCPSSKATLYDGVSNMLMHY 235
Query: 180 VPEVKDIRTV 189
VPE++ I V
Sbjct: 236 VPEIEKIEQV 245
>gi|225563079|gb|EEH11358.1| HIRA-interacting protein [Ajellomyces capsulatus G186AR]
Length = 314
Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats.
Identities = 78/199 (39%), Positives = 118/199 (59%), Gaps = 10/199 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEAEI----SPLASRIFSIPGIA 52
+FIQTE TPN LKF P VL E + + + + SPLA+++ ++ G++
Sbjct: 79 IFIQTETTPNADALKFNPNHPVLPENFPTSFVEYLSPRSTLTPPYPSPLAAKLLNVDGVS 138
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-NGGLGDMKLDDMGSGDF 110
+V++G DFIT+ K +W H++P V +I E +G+PII+ + S +
Sbjct: 139 AVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTTGEPIINVAEAGAGAGPAEEDSLSY 198
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
E D VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ TLK
Sbjct: 199 NEDDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKN 258
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ ++L H++ EVK + V
Sbjct: 259 GIESMLMHYIEEVKGVNHV 277
>gi|162147187|ref|YP_001601648.1| nitrogen fixation protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209544240|ref|YP_002276469.1| Scaffold protein Nfu/NifU [Gluconacetobacter diazotrophicus PAl 5]
gi|161785764|emb|CAP55335.1| putative nitrogen fixation protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|209531917|gb|ACI51854.1| Scaffold protein Nfu/NifU [Gluconacetobacter diazotrophicus PAl 5]
Length = 187
Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats.
Identities = 94/192 (48%), Positives = 128/192 (66%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKE-AEISPLASRIFSIPGIASVYFGY 58
MFI+TEDTPNPATLKF+PG+ ++ F + A S LA +F PG+A V+ G
Sbjct: 1 MFIETEDTPNPATLKFLPGRTIVPGRATADFVSPDAVAGRSKLADALFGQPGVARVFLGG 60
Query: 59 DFITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
DF+ V KD+ DW L+P +L ++++ F+SG P I + + +L D +
Sbjct: 61 DFVAVTKDEATDWSVLKPQLLSVLVDFFVSGMPAIEDDAAVEEEL-------IAPEDEEI 113
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V++IKE+LD RVRPAVA DGGDIVF+GYRDG+V L+M+GACSGCPS+ TLK+GV N+L
Sbjct: 114 VRQIKELLDTRVRPAVAGDGGDIVFRGYRDGVVRLTMQGACSGCPSSRATLKHGVENMLR 173
Query: 178 HFVPEVKDIRTV 189
H+VPEV + V
Sbjct: 174 HYVPEVVSVEQV 185
>gi|116199405|ref|XP_001225514.1| hypothetical protein CHGG_07858 [Chaetomium globosum CBS 148.51]
gi|88179137|gb|EAQ86605.1| hypothetical protein CHGG_07858 [Chaetomium globosum CBS 148.51]
Length = 337
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 82/211 (38%), Positives = 120/211 (56%), Gaps = 22/211 (10%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG----AIHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE TPN LKF+P +L G I + N + SPLA+++ +I G+
Sbjct: 86 IFIQTESTPNADALKFLPNHQILPAGLTTPFIEYLNPRATIAPPHPSPLAAQLMNIDGVT 145
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGG-------------LG 98
+V++G DFITV K +W H+RP V +I E SG PI++ G
Sbjct: 146 AVFYGADFITVTKAADANWAHVRPEVFALITEAITSGQPIVNVAERKEGGGGVGGAAGEG 205
Query: 99 DMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGAC 158
+ ++ S + E+DS VV IKE+L+ RVRPA+ DGGDI F+G+ +G V L +RGAC
Sbjct: 206 EGAAEEKDSLAYDENDSEVVGMIKELLETRVRPAIQEDGGDIEFRGFENGYVMLKLRGAC 265
Query: 159 SGCPSASETLKYGVANILNHFVPEVKDIRTV 189
C S++ TLK G+ +L H++ EV+ + V
Sbjct: 266 RTCDSSTVTLKNGIEGMLMHYIEEVQGVHQV 296
>gi|328773127|gb|EGF83164.1| hypothetical protein BATDEDRAFT_9276 [Batrachochytrium
dendrobatidis JAM81]
Length = 225
Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 85/193 (44%), Positives = 112/193 (58%), Gaps = 10/193 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAI---HFSNAKEAEISPLASRIFSIPGIASVYFG 57
MFIQTE TPN +LKF PG++VL EG F +A+EA SPLAS +F I G+ SV FG
Sbjct: 9 MFIQTESTPNLDSLKFKPGKLVLPEGTTSTREFISAREAMQSPLASTLFRIDGVKSVLFG 68
Query: 58 YDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
D ITV K W ++P + G IM+ + SG P+ G + DS
Sbjct: 69 KDVITVNKSPDVAWSIIKPDIFGAIMDFYSSGVPLFKVAFEG------PTDTMILPEDSE 122
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V IKE+LD R+RP + DGGDI + G+ +G V L +RGAC C S+ TLK G+ N+L
Sbjct: 123 TVAMIKELLDTRIRPTIQEDGGDIEYMGFVNGAVRLKLRGACRTCDSSVVTLKNGIENML 182
Query: 177 NHFVPEVKDIRTV 189
H++PEV + V
Sbjct: 183 MHYIPEVTAVEQV 195
>gi|325187609|emb|CCA22145.1| ironsulfur cluster scaffold protein Nfulike protein putative
[Albugo laibachii Nc14]
Length = 287
Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats.
Identities = 82/196 (41%), Positives = 118/196 (60%), Gaps = 14/196 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEAEISPLASRIFSIPGIASVYF 56
MF+QTE TPNP +LKF+PG+ VL + G A E SPLA ++F I GI+ V+F
Sbjct: 71 MFVQTEPTPNPNSLKFLPGKPVLDDRFTTGVDFVPGAAEIRQSPLAKKLFQIDGISRVFF 130
Query: 57 GYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDS 115
G DFI+V K D W+ LR + I++ + +G+ + + + + + D
Sbjct: 131 GKDFISVTKADDMHWDALRAEIFATIIDFYGTGEATMSDEPI-------VTDTTILPEDD 183
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVA 173
VV IKE+L+ R+RP+V DGGDI +K + GIV L + GAC+GCPS+S TLK GV
Sbjct: 184 EVVAMIKELLEQRIRPSVQDDGGDIFYKDFDVERGIVKLQLAGACAGCPSSSVTLKSGVE 243
Query: 174 NILNHFVPEVKDIRTV 189
N+L +++PEV+ I V
Sbjct: 244 NMLKYYIPEVQGIEEV 259
>gi|66808847|ref|XP_638146.1| NIF system FeS cluster assembly domain-containing protein
[Dictyostelium discoideum AX4]
gi|60466582|gb|EAL64634.1| NIF system FeS cluster assembly domain-containing protein
[Dictyostelium discoideum AX4]
Length = 314
Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 81/191 (42%), Positives = 122/191 (63%), Gaps = 6/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAI-HFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQTE TPNP +LKFIPG VL EG I FS+ K ++ SPLA+ +F + G+ V+F D
Sbjct: 98 IFIQTETTPNPDSLKFIPGVQVLEEGQIIDFSDFKTSQQSPLANNLFKLDGVNRVFFSSD 157
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K +++W L+P + G I++ + SG PI+ + LG++ D + D VV
Sbjct: 158 FISVNKYPEHEWSILKPQIYGTIIDFYHSGLPILSDPSLGNINAD----TMILPEDDEVV 213
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+++ R+RP V DGG+I + G++DGIV + ++G CS C S+ TLK G+ +L H
Sbjct: 214 AMIKELIETRIRPTVLEDGGNIKYMGFKDGIVMVQLQGTCSSCSSSQATLKGGIERMLMH 273
Query: 179 FVPEVKDIRTV 189
++ EV + V
Sbjct: 274 WISEVTGVIAV 284
>gi|254420655|ref|ZP_05034379.1| Scaffold protein Nfu/NifU N terminal [Brevundimonas sp. BAL3]
gi|196186832|gb|EDX81808.1| Scaffold protein Nfu/NifU N terminal [Brevundimonas sp. BAL3]
Length = 185
Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats.
Identities = 84/192 (43%), Positives = 120/192 (62%), Gaps = 13/192 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF+PG+ V + + A SPLA +F + G+ V+FG D+
Sbjct: 1 MFIQTEPTPNPNVLKFLPGREVSPLAVLDYRTIDAATASPLAEALFELEGVDGVFFGADY 60
Query: 61 ITVGKDQ--YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
++V + + DW ++ P+LG+IM+HF+SG P+ G + E DS +V
Sbjct: 61 VSVTRQERGPDWSEMKAPILGVIMDHFVSGRPLTVAGSETETHA---------EDDSEIV 111
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IK +LD+R+RPAVA+DGGDI+F + + G++ L MRGACSGCPS+S TLK GV ++
Sbjct: 112 AEIKALLDSRIRPAVAQDGGDILFDAFDEATGVLSLRMRGACSGCPSSSATLKAGVEQMM 171
Query: 177 NHFVPEVKDIRT 188
H+VPEV +
Sbjct: 172 RHYVPEVTRVEQ 183
>gi|303322791|ref|XP_003071387.1| NifU-like domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240111089|gb|EER29242.1| NifU-like domain containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 325
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 76/203 (37%), Positives = 119/203 (58%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE TPN LKFIP VL E + + + + SPLA+++ ++ G++
Sbjct: 81 IFIQTEVTPNADALKFIPNYPVLPENFPAPFLEYLSPRSTLAAPHPSPLAAKLLNVDGVS 140
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-----NGGLGDMKLDDMG 106
SV++G DFIT+ K +W H++P V +I E SG+ +++ G +
Sbjct: 141 SVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTSGEQLVNTVAVAEGAHAGQEGSGEE 200
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ ++ E D VV I E+L+ R+RPA+ DGGDI F+G++DG V L +RGAC C S++
Sbjct: 201 AVEYNEEDEEVVGMINELLETRIRPAIQEDGGDIEFRGFKDGNVMLKLRGACRTCDSSTV 260
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ ++L H++ EVK + V
Sbjct: 261 TLKNGIESMLMHYIEEVKSVTQV 283
>gi|85374519|ref|YP_458581.1| hypothetical protein ELI_08460 [Erythrobacter litoralis HTCC2594]
gi|84787602|gb|ABC63784.1| hypothetical protein ELI_08460 [Erythrobacter litoralis HTCC2594]
Length = 192
Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 128/191 (67%), Gaps = 3/191 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+TE TPNP+TLKF+PGQ V+ G F++ +EAE SPLA IF + +V+FG DF
Sbjct: 1 MFIETETTPNPSTLKFLPGQQVMPGGTREFTSPEEAEASPLAQAIFDTGEVTNVFFGSDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAV 117
++V DW L+ V+ ++++HF+S P+ G + + E D+ +
Sbjct: 61 VSVSAAPGADWSSLKGMVVSILLDHFVSQAPLFVGGDASGISVPAEDDLLVEENADDADI 120
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +I E+L+ RVRPAVA DGGDI ++G++DG+V+L+++GACSGCPS++ TLK G+ +L
Sbjct: 121 VAQINELLETRVRPAVAGDGGDIAYRGFKDGVVYLTLQGACSGCPSSTATLKQGIEGLLK 180
Query: 178 HFVPEVKDIRT 188
H+VPEV ++R
Sbjct: 181 HYVPEVVEVRA 191
>gi|310796741|gb|EFQ32202.1| hypothetical protein GLRG_07346 [Glomerella graminicola M1.001]
Length = 316
Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats.
Identities = 81/207 (39%), Positives = 120/207 (57%), Gaps = 18/207 (8%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE TPN +KF+P +L E I + N + SPLA+++ +I G+
Sbjct: 80 IFIQTEQTPNADAIKFLPNHRILPENISTPFIEYLNPRSTIAPPYPSPLAAQLMNIDGVT 139
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD--------MKLD 103
SV++G DFITV K +W H+RP V +I E SG I++ + +
Sbjct: 140 SVFYGADFITVSKAADANWAHIRPEVFALITEAITSGQSIVNVAEKKEGGVAGEEQQQHG 199
Query: 104 DMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCP 162
+ S + E+DS VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C
Sbjct: 200 EEDSLAYDENDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFTDDGIVLLKLRGACRTCD 259
Query: 163 SASETLKYGVANILNHFVPEVKDIRTV 189
S++ TLK G+ +L H++ EVK ++ +
Sbjct: 260 SSTVTLKNGIEGMLMHYIEEVKGVQQI 286
>gi|281208054|gb|EFA82232.1| NIF system FeS cluster assembly domain-containing protein
[Polysphondylium pallidum PN500]
Length = 307
Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats.
Identities = 75/191 (39%), Positives = 118/191 (61%), Gaps = 7/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQTE+TPNP +LKF+PG V+ G I F + K ++ISPLA+ IF + G+ V++G D
Sbjct: 96 LFIQTENTPNPDSLKFVPGIEVMPPGKTIDFPDFKSSQISPLANAIFKLDGVNRVFYGPD 155
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K +++W L+P V G I++ + S P++ ++ + D V
Sbjct: 156 FISVNKFPEHEWAILKPQVFGAIIDFYHSDKPLLSE-----TPTNENSDTLILPEDDETV 210
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+++ RVRP + DGG+I + G++DGIV + ++G CS C S+ TLK G+ +L H
Sbjct: 211 AMIKELIETRVRPTLLDDGGNIQYLGFKDGIVLVKLQGTCSSCSSSQATLKGGIERMLMH 270
Query: 179 FVPEVKDIRTV 189
++ EV+ I V
Sbjct: 271 WISEVRGIMAV 281
>gi|119189821|ref|XP_001245517.1| hypothetical protein CIMG_04958 [Coccidioides immitis RS]
Length = 325
Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats.
Identities = 76/203 (37%), Positives = 119/203 (58%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE TPN LKFIP VL E + + + + SPLA+++ ++ G++
Sbjct: 81 IFIQTEVTPNADALKFIPNYPVLPENFPAPFLEYLSPRSTLAAPHPSPLAAKLLNVDGVS 140
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-----NGGLGDMKLDDMG 106
SV++G DFIT+ K +W H++P V +I E SG+ +++ G +
Sbjct: 141 SVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTSGEQLVNTVAVAEGAQAGQEGSGEE 200
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ ++ E D VV I E+L+ R+RPA+ DGGDI F+G++DG V L +RGAC C S++
Sbjct: 201 AVEYNEEDEEVVGMINELLETRIRPAIQEDGGDIEFRGFKDGNVMLKLRGACRTCDSSTV 260
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ ++L H++ EVK + V
Sbjct: 261 TLKNGIESMLMHYIEEVKSVTQV 283
>gi|320032859|gb|EFW14809.1| NifU family protein [Coccidioides posadasii str. Silveira]
Length = 325
Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats.
Identities = 76/203 (37%), Positives = 119/203 (58%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE TPN LKFIP VL E + + + + SPLA+++ ++ G++
Sbjct: 81 IFIQTEVTPNADALKFIPNYPVLPENFPAPFLEYLSPRSTLAAPHPSPLAAKLLNVDGVS 140
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-----NGGLGDMKLDDMG 106
SV++G DFIT+ K +W H++P V +I E SG+ +++ G +
Sbjct: 141 SVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTSGEQLVNTVAVAEGAHAGQEGSGEE 200
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ ++ E D VV I E+L+ R+RPA+ DGGDI F+G++DG V L +RGAC C S++
Sbjct: 201 AVEYNEEDEEVVGMINELLETRIRPAIQEDGGDIEFRGFKDGNVMLKLRGACRTCDSSTV 260
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ ++L H++ EVK + V
Sbjct: 261 TLKNGIESMLMHYIEEVKSVTQV 283
>gi|302695957|ref|XP_003037657.1| hypothetical protein SCHCODRAFT_48637 [Schizophyllum commune H4-8]
gi|300111354|gb|EFJ02755.1| hypothetical protein SCHCODRAFT_48637 [Schizophyllum commune H4-8]
Length = 220
Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats.
Identities = 78/193 (40%), Positives = 121/193 (62%), Gaps = 5/193 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE-GAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQTE TPN ++KFIPG V+ E G F + + A SPLA R+ I G+ +V++G D
Sbjct: 1 MFIQTESTPNEDSIKFIPGVPVMGESGTAEFLDTRSALTSPLAVRLMGIEGVRAVFYGPD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+TV K ++ W ++P + ++ME F S + + D + +++DS VV
Sbjct: 61 FVTVSKSSEHPWSVIKPEIYSVLMEFFTSNNQPLFRSK-EDRENAGPQDTRILDTDSDVV 119
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+L+ RVRPA+ DGGDI ++G+ + G+V + ++G+C GC S++ TLK G+ N+L
Sbjct: 120 AMIKELLETRVRPAIMEDGGDIEYRGFDEESGVVQVKLKGSCRGCSSSTVTLKTGIENML 179
Query: 177 NHFVPEVKDIRTV 189
H++PEVK + V
Sbjct: 180 MHYIPEVKGVEQV 192
>gi|330991171|ref|ZP_08315124.1| NFU1 iron-sulfur cluster scaffold-like protein [Gluconacetobacter
sp. SXCC-1]
gi|329761757|gb|EGG78248.1| NFU1 iron-sulfur cluster scaffold-like protein [Gluconacetobacter
sp. SXCC-1]
Length = 187
Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 92/192 (47%), Positives = 126/192 (65%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKE-AEISPLASRIFSIPGIASVYFGY 58
MFI+TEDTPNPATLKF+PG+ ++ G F + A S LA +F + G+A V+FG
Sbjct: 1 MFIETEDTPNPATLKFLPGREIMANGATADFISPDSVAGRSRLAELLFDLDGVARVFFGA 60
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
DF+ V + D +WE LRP VL ++ ++ +G ++ + + D +
Sbjct: 61 DFVAVTRSDSVEWEGLRPQVLAVLADYLATGQAVVESDAQ-------VVEDLIAPGDEEI 113
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
VQ+IKE+LD RVRPAVA DGGDIVF+GYRDG+V L+M+GACSGCPS+ TLK+GV N+L
Sbjct: 114 VQQIKELLDTRVRPAVAGDGGDIVFRGYRDGVVRLTMQGACSGCPSSRATLKHGVENMLR 173
Query: 178 HFVPEVKDIRTV 189
H+VPEV + V
Sbjct: 174 HYVPEVVSVEQV 185
>gi|329891163|ref|ZP_08269506.1| scaffold protein Nfu/NifU family protein [Brevundimonas diminuta
ATCC 11568]
gi|328846464|gb|EGF96028.1| scaffold protein Nfu/NifU family protein [Brevundimonas diminuta
ATCC 11568]
Length = 185
Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 82/193 (42%), Positives = 123/193 (63%), Gaps = 13/193 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF+PG+ V V+ + + EA SPLA +F + G+ V+FG D+
Sbjct: 1 MFIQTEATPNPNALKFLPGRDVAVQDVLEYRTIDEAAASPLAEALFELEGVEGVFFGADY 60
Query: 61 ITVGKDQY--DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+++ + + DW ++ P+L +IM+HF+SG P++ G + D+ +V
Sbjct: 61 VSITRAAHGPDWTEMKAPILSVIMDHFVSGAPLVREGETA---------TEDAGEDTEIV 111
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IK +LD+R+RPAVA+DGGDI+F + + G++ L MRGAC+GCPS+S TLK GV ++
Sbjct: 112 AEIKSLLDSRIRPAVAQDGGDILFDHFDEETGVLRLRMRGACAGCPSSSATLKAGVEQMM 171
Query: 177 NHFVPEVKDIRTV 189
H+VPEV + V
Sbjct: 172 RHYVPEVTSVEQV 184
>gi|154281411|ref|XP_001541518.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411697|gb|EDN07085.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 279
Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 78/199 (39%), Positives = 118/199 (59%), Gaps = 10/199 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEAEI----SPLASRIFSIPGIA 52
+FIQTE TPN LKF P VL E + + + + SPLA+++ ++ G++
Sbjct: 44 IFIQTETTPNADALKFNPNHPVLPENFPTSFVEYLSPRSTLTPPYPSPLAAKLLNVDGVS 103
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-NGGLGDMKLDDMGSGDF 110
+V++G DFIT+ K +W H++P V +I E +G+PII+ + S +
Sbjct: 104 AVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTTGEPIINVAEAGAGAGPAEEDSLSY 163
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
E D VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ TLK
Sbjct: 164 NEDDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKN 223
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ ++L H++ EVK + V
Sbjct: 224 GIESMLMHYIEEVKGVNHV 242
>gi|326403969|ref|YP_004284051.1| hypothetical protein ACMV_18220 [Acidiphilium multivorum AIU301]
gi|325050831|dbj|BAJ81169.1| hypothetical protein ACMV_18220 [Acidiphilium multivorum AIU301]
Length = 185
Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats.
Identities = 98/190 (51%), Positives = 133/190 (70%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+T+ TPNPATLKF+PG+ VL +G+ F +A A SPLA +F++PG+ V+ G DF
Sbjct: 1 MFIETDVTPNPATLKFLPGREVLGQGSADFDSADAAAASPLAEALFALPGVVRVFLGADF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
++V +D+ +W L+P VLG IMEH++SG P++ D +D +
Sbjct: 61 VSVTRDEGTEWTSLKPQVLGAIMEHYLSGRPVMAGA-------QAEVDEDVDPADREIAD 113
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA DGGDIVF+G+RDGIV L M+GACSGCPS++ TLK G+ N+L H+
Sbjct: 114 QIKELLDMRVRPAVAGDGGDIVFRGFRDGIVSLHMQGACSGCPSSTATLKMGIENLLKHY 173
Query: 180 VPEVKDIRTV 189
VPEVK +R V
Sbjct: 174 VPEVKSVRQV 183
>gi|225629714|ref|ZP_03787679.1| NifU domain protein [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225591431|gb|EEH12506.1| NifU domain protein [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 194
Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats.
Identities = 92/189 (48%), Positives = 130/189 (68%), Gaps = 4/189 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E+TPNP TLKF+PG +L EG FSNA E + S LA+ +F I + V+FG+D
Sbjct: 5 MFIQIEETPNPNTLKFLPGFAILNEGETADFSNADEIKNSKLAANLFQIEHVVRVFFGHD 64
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K +W+ L+ +L IM+HF SG + G+ D + D F E+D +V
Sbjct: 65 FISVTKLGGINWDTLKVEILTTIMDHFTSGGKALDKEGVNDNNISD--EEFFDENDIEIV 122
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
RIKE++++ ++PAVA+DGGDI F+GY+DGIV++ ++GACSGCPSA+ TLK GV N+L++
Sbjct: 123 NRIKELMESYIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLSY 182
Query: 179 FVPEVKDIR 187
+PEV I
Sbjct: 183 HIPEVAGIE 191
>gi|212540196|ref|XP_002150253.1| NifU-related protein [Penicillium marneffei ATCC 18224]
gi|210067552|gb|EEA21644.1| NifU-related protein [Penicillium marneffei ATCC 18224]
Length = 285
Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats.
Identities = 80/194 (41%), Positives = 115/194 (59%), Gaps = 14/194 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE TPNP LKF+P VL E + + + + SPLA+++ +I GI+
Sbjct: 81 IFIQTESTPNPDALKFLPNNRVLPENFSTPFLEYLSPRSTLAPPHPSPLAAKLLNIEGIS 140
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD-- 109
SV++G DFITV K +W H++P V +I E SG+PI++ D G
Sbjct: 141 SVFYGPDFITVTKSSDVNWAHVKPEVFSLITEVVTSGEPIVNTVEHTSGAQDAQEGGGED 200
Query: 110 ---FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ E D VV IKE+L+ R+RPA+ DGGDI F+G+ +GIV L +RGAC C S++
Sbjct: 201 TLGYNEEDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFENGIVLLKLRGACRTCDSSTV 260
Query: 167 TLKYGVANILNHFV 180
TLK G+ ++L H+V
Sbjct: 261 TLKNGIESMLMHYV 274
>gi|148260770|ref|YP_001234897.1| NifU domain-containing protein [Acidiphilium cryptum JF-5]
gi|146402451|gb|ABQ30978.1| nitrogen-fixing NifU domain protein [Acidiphilium cryptum JF-5]
Length = 185
Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats.
Identities = 98/190 (51%), Positives = 132/190 (69%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+T+ TPNPATLKF+PG+ VL +G+ F +A A SPLA +F++PG+ V+ G DF
Sbjct: 1 MFIETDVTPNPATLKFLPGREVLGQGSADFDSADAAAASPLAEALFALPGVVRVFLGADF 60
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
++V +D +W L+P VLG IMEH++SG P++ D +D +
Sbjct: 61 VSVTRDDGTEWTSLKPQVLGAIMEHYLSGRPVMAGA-------QAEVDEDVDPADREIAD 113
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE+LD RVRPAVA DGGDIVF+G+RDGIV L M+GACSGCPS++ TLK G+ N+L H+
Sbjct: 114 QIKELLDMRVRPAVAGDGGDIVFRGFRDGIVSLHMQGACSGCPSSTATLKMGIENLLKHY 173
Query: 180 VPEVKDIRTV 189
VPEVK +R V
Sbjct: 174 VPEVKSVRQV 183
>gi|326386713|ref|ZP_08208334.1| nitrogen-fixing NifU-like protein [Novosphingobium nitrogenifigens
DSM 19370]
gi|326208766|gb|EGD59562.1| nitrogen-fixing NifU-like protein [Novosphingobium nitrogenifigens
DSM 19370]
Length = 191
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 84/190 (44%), Positives = 130/190 (68%), Gaps = 2/190 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+TE TPNPATLKF+PG++V+ +G F++A+EA ISPLA +FS+ + V FG +F
Sbjct: 1 MFIETETTPNPATLKFLPGEIVMADGTREFTSAEEAAISPLADALFSLGDVTGVLFGREF 60
Query: 61 ITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLG-DMKLDDMGSGDFIESDSAVV 118
++V W +P VL ++++HF+S P+ G + ++ +D+ +V
Sbjct: 61 VSVTIAPGSAWSDTKPQVLAVLLDHFVSQAPLFVAASAGFSVPAEEDEDFGDDPADADIV 120
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+I ++++ R+RPAVA DGGDI ++G+RDG+V+L M+GACSGCPS+S TLK G+ +L H
Sbjct: 121 DQILDLIETRIRPAVANDGGDISYRGFRDGVVYLRMQGACSGCPSSSATLKNGIEALLKH 180
Query: 179 FVPEVKDIRT 188
+VPEV ++R
Sbjct: 181 YVPEVNEVRA 190
>gi|242011992|ref|XP_002426727.1| HIRA-interacting protein, putative [Pediculus humanus corporis]
gi|212510898|gb|EEB13989.1| HIRA-interacting protein, putative [Pediculus humanus corporis]
Length = 216
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 83/192 (43%), Positives = 113/192 (58%), Gaps = 20/192 (10%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT+DTPNP +LKFIPG VL G F NA A SPL +F I G+ SV+FG D
Sbjct: 14 MFIQTQDTPNPNSLKFIPGVKVLENGKTKDFPNAASALCSPLGKSLFRINGVKSVFFGPD 73
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FIT+ K + W+ + P + IM+ F SG PI+ ES S
Sbjct: 74 FITITKQDEDVSWKLINPEIFATIMDFFSSGLPILTE----------------NESKSDF 117
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V+ E+L+ R+RP V DGGD+VFKG+ +GIV L + G+C+ CPS+ TLK G+ N+L
Sbjct: 118 VKE-NELLETRIRPTVQEDGGDVVFKGFENGIVKLKLLGSCTTCPSSIVTLKNGIQNMLQ 176
Query: 178 HFVPEVKDIRTV 189
++PEV ++ +
Sbjct: 177 FYIPEVLEVEQI 188
>gi|190571129|ref|YP_001975487.1| NifU domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018533|ref|ZP_03334341.1| NifU domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357401|emb|CAQ54835.1| NifU domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995484|gb|EEB56124.1| NifU domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 190
Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats.
Identities = 92/189 (48%), Positives = 131/189 (69%), Gaps = 4/189 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E+TPNP TLKF+PG +L EG FSNA E + S LA +F I + V+FG+D
Sbjct: 1 MFIQIEETPNPNTLKFLPGFEILSEGETADFSNADEIKNSKLAVNLFQIEHVVRVFFGHD 60
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K D+ +W+ ++ +L IM+HF SG G+ D K+ + F E+D +V
Sbjct: 61 FISVTKSDRMNWDIVKVEILTTIMDHFTSGGKAFDKEGVSDNKM--LEEEFFNENDIEIV 118
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
RIKE++++ ++PAVA+DGGDI F+GY+DGIV++ ++GACSGCPSA+ TLK GV N+L++
Sbjct: 119 NRIKELMESYIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLSY 178
Query: 179 FVPEVKDIR 187
+PEV I
Sbjct: 179 HIPEVSGIE 187
>gi|170593029|ref|XP_001901267.1| r10h10-like protein TO42 [Brugia malayi]
gi|158591334|gb|EDP29947.1| r10h10-like protein TO42, putative [Brugia malayi]
Length = 220
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 84/193 (43%), Positives = 127/193 (65%), Gaps = 8/193 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG--AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
MFIQ ++TPNPATLKFIPG++++ +G + F N A+ SPLA +F I GI SV+FG
Sbjct: 1 MFIQVQETPNPATLKFIPGKMIMGKGKGTLDFGNFMSAKKSPLAMELFRINGIKSVFFGE 60
Query: 59 DFITVGKDQY--DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
D++T+ K + DW L+P + ++M++ S PI++ + D + DS
Sbjct: 61 DYVTITKQKEIDDWTLLKPEIFAVLMDYLQSEKPIVNESEMLKGPED----TEIHPEDSD 116
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V IKE+L+ R++P V DGGD+++KG+ DG+V L M+G+C+GCPS+S TL+ G+ N+L
Sbjct: 117 TVAMIKELLECRIKPMVQEDGGDVIYKGFLDGVVHLKMQGSCTGCPSSSVTLQSGIKNML 176
Query: 177 NHFVPEVKDIRTV 189
+VPEVKD+ V
Sbjct: 177 QFYVPEVKDVMEV 189
>gi|58584670|ref|YP_198243.1| NifU family protein [Wolbachia endosymbiont strain TRS of Brugia
malayi]
gi|58418986|gb|AAW71001.1| NifU family protein containing thioredoxin-like domain [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 190
Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats.
Identities = 91/189 (48%), Positives = 127/189 (67%), Gaps = 4/189 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E+TPNP TLKF+PG +L E FSN E + S LA+ +F I + V+FG+D
Sbjct: 1 MFIQIEETPNPNTLKFLPGFAILNERETADFSNPDEIKNSKLAADLFQIEHVIRVFFGHD 60
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K D W+ L+ +L +M+HF SG + G+ D + D F E+D +V
Sbjct: 61 FISVTKSDGISWDILKVEILTTVMDHFTSGGKALDRKGVNDNNIPD--EEFFDENDIEIV 118
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
RIKE+++N ++PAVA+DGGDI F+GY+DGIV++ ++GACSGCPSA+ TLK GV N+L +
Sbjct: 119 NRIKELMENYIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLCY 178
Query: 179 FVPEVKDIR 187
+PEV I
Sbjct: 179 HIPEVSGIE 187
>gi|210075172|ref|XP_500339.2| YALI0B00264p [Yarrowia lipolytica]
gi|199425114|emb|CAG82553.2| YALI0B00264p [Yarrowia lipolytica]
Length = 263
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 79/192 (41%), Positives = 112/192 (58%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQT TPN LKF+P +L EG + F++ +EA SPLA ++F + G+ SV FG D
Sbjct: 46 MFIQTASTPNEDALKFLPSVQILPEGHTVEFTSGREAHSSPLAKKLFGVDGVRSVMFGSD 105
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K W L+P V ++ EH +G PI+ G + DS VV
Sbjct: 106 FITVEKAQDTHWNTLKPEVFSILTEHITAGAPIVMEGTTA------AEDTAPCDDDSEVV 159
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+++ R+RPA+ DGGDI F+G+ + G+V L + GAC C S++ TLK G+ ++L
Sbjct: 160 SMIKELIETRIRPAIQEDGGDIAFRGFDEDTGVVHLKLLGACRSCDSSAVTLKNGIESML 219
Query: 177 NHFVPEVKDIRT 188
H+V EV +
Sbjct: 220 MHYVEEVTGVEQ 231
>gi|254295433|ref|YP_003061456.1| Scaffold protein Nfu/NifU [Hirschia baltica ATCC 49814]
gi|254043964|gb|ACT60759.1| Scaffold protein Nfu/NifU [Hirschia baltica ATCC 49814]
Length = 190
Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 124/191 (64%), Gaps = 7/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP TLKF+PG+ V + F N KEA SPLA+ +F++ G+ +V+ G DF
Sbjct: 1 MFIQTEATPNPETLKFLPGREVSPKTPYEFLNEKEAGSSPLAAFLFTLKGVKTVFLGADF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+ + K + DW L+P L IM+HF+SG P++ + + + G+ ++ +V
Sbjct: 61 VALTKTQETDWAILKPQALAAIMDHFVSGMPVMADYSDPAPVEEVIYEGE----NAEIVA 116
Query: 120 RIKEVLDNRVRPAVARDGGDIVFK--GYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+++ RVRPAVA DGGDI+F+ G+V L MRGAC+GCPS++ TLK G+ N+L
Sbjct: 117 EIKELIETRVRPAVANDGGDIIFEKFDVDTGVVTLQMRGACAGCPSSTMTLKSGIENMLR 176
Query: 178 HFVPEVKDIRT 188
H+VPEV +
Sbjct: 177 HYVPEVTAVEA 187
>gi|170747078|ref|YP_001753338.1| scaffold protein Nfu/NifU [Methylobacterium radiotolerans JCM 2831]
gi|170653600|gb|ACB22655.1| Scaffold protein Nfu/NifU [Methylobacterium radiotolerans JCM 2831]
Length = 188
Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats.
Identities = 100/191 (52%), Positives = 142/191 (74%), Gaps = 5/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+VVL E +A+ A SPLA+ +F++PG+A VYFG+DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRVVLAESTFEARDAEAAARSPLAAALFTVPGVAGVYFGHDF 60
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
I+V K D +W ++P VLG IMEHF SG P++ GG G++ + G + E+D V
Sbjct: 61 ISVTKAEDGSEWAQVKPAVLGAIMEHFQSGAPVMAEGGHGEI---EPGDEFYDEADHDTV 117
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IK++L+ RVRPAVA DGGDI F+GY++G+V+L M+GACSGCPS++ TL++GV N+ H
Sbjct: 118 VTIKDLLETRVRPAVAGDGGDITFRGYKEGVVYLEMKGACSGCPSSTATLRHGVQNLFRH 177
Query: 179 FVPEVKDIRTV 189
F+PE+++++ +
Sbjct: 178 FLPEIREVQAI 188
>gi|198427432|ref|XP_002130447.1| PREDICTED: similar to NFU1 iron-sulfur cluster scaffold homolog (S.
cerevisiae) [Ciona intestinalis]
Length = 284
Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats.
Identities = 79/194 (40%), Positives = 120/194 (61%), Gaps = 12/194 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT +TPNP LKF+PG VL G F + K + SPLA R+F I G+ +V+ G DF
Sbjct: 72 MFIQTFETPNPNCLKFVPGVPVLGTGTADFPDWKNSYKSPLAKRLFGIEGVKAVFLGPDF 131
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGD-PIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+TV + ++ W+ L+P + ++M+ F +G+ P++ + G + D + +
Sbjct: 132 LTVTRQDEEVQWKVLKPEIYSLVMDFFTAGNIPVLTDEGPSADTVVDEDDDE-------I 184
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANI 175
V +KE+LD R+RP V DGGDI+FKG+ G V L ++G+CS CPS+S TLK G+ N+
Sbjct: 185 VAMVKELLDTRIRPTVMEDGGDIIFKGFDPETGSVKLKLQGSCSNCPSSSVTLKSGIENM 244
Query: 176 LNHFVPEVKDIRTV 189
L ++PEV ++ V
Sbjct: 245 LKFYIPEVMEVEEV 258
>gi|315497209|ref|YP_004086013.1| scaffold protein nfu/nifu [Asticcacaulis excentricus CB 48]
gi|315415221|gb|ADU11862.1| Scaffold protein Nfu/NifU [Asticcacaulis excentricus CB 48]
Length = 188
Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats.
Identities = 90/194 (46%), Positives = 123/194 (63%), Gaps = 12/194 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKFIPG+ VL +G++ F +AE SPLA +F I G++ VYFG DF
Sbjct: 1 MFIQTEATPNPDVLKFIPGREVLGKGSMEFRTETDAEKSPLALSLFQIDGVSGVYFGSDF 60
Query: 61 ITVGKDQYD---WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+TV +D W ++ P+L IM+ + SG I++ G + + + +
Sbjct: 61 LTVKRDAEAGLIWAQIKAPILAAIMDFYASGRAILNEEG-------AVNERTYEGEVAQI 113
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFK--GYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
V IK++LD RVRPAVA+DGGDI F+ G ++L MRGACSGCPS+S TL+ GV ++
Sbjct: 114 VLEIKDLLDTRVRPAVAQDGGDIEFEHFDIESGTLYLHMRGACSGCPSSSATLRQGVESL 173
Query: 176 LNHFVPEVKDIRTV 189
+ H+VPEVK I V
Sbjct: 174 MKHYVPEVKTIEQV 187
>gi|296114423|ref|ZP_06833077.1| Scaffold protein Nfu/NifU [Gluconacetobacter hansenii ATCC 23769]
gi|295979184|gb|EFG85908.1| Scaffold protein Nfu/NifU [Gluconacetobacter hansenii ATCC 23769]
Length = 187
Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats.
Identities = 91/192 (47%), Positives = 126/192 (65%), Gaps = 10/192 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKE-AEISPLASRIFSIPGIASVYFGY 58
MFI+TEDTPNPATLKF+PG+ ++ G F +A A S LA +F + G++ V+FG
Sbjct: 1 MFIETEDTPNPATLKFLPGRELMPNGATADFIDADSVAGRSRLAEVLFDLEGVSRVFFGG 60
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
DF+ V K D W+ L+P VL ++ ++ +G + + + + D +
Sbjct: 61 DFVAVTKADTVAWDELKPQVLSVVADYLATGQAPVEHEAV-------VIEDAIAPGDEEI 113
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V++IKE+LD RVRPAVA DGGDIVF+GYRDGIV L+M+GACSGCPS+ TLK+GV N+L
Sbjct: 114 VKQIKELLDTRVRPAVAGDGGDIVFRGYRDGIVRLTMQGACSGCPSSRATLKHGVENMLR 173
Query: 178 HFVPEVKDIRTV 189
H+VPEV + V
Sbjct: 174 HYVPEVVSVEQV 185
>gi|58699011|ref|ZP_00373859.1| NifU domain protein [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225630807|ref|YP_002727598.1| NifU domain protein [Wolbachia sp. wRi]
gi|58534475|gb|EAL58626.1| NifU domain protein [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225592788|gb|ACN95807.1| NifU domain protein [Wolbachia sp. wRi]
Length = 194
Score = 240 bits (612), Expect = 9e-62, Method: Composition-based stats.
Identities = 90/189 (47%), Positives = 130/189 (68%), Gaps = 4/189 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E+TPNP TLKF+PG +L EG FSNA E + S LA+ +F I + V+FG+D
Sbjct: 5 MFIQIEETPNPNTLKFLPGFEILNEGETTDFSNANEIKNSKLAANLFQIEHVVRVFFGHD 64
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K +W+ L+ +L IM+HF SG + G+ D + D F ++D +V
Sbjct: 65 FISVTKLGGINWDTLKVEILTTIMDHFTSGGKALDKEGVNDNNIPD--EEFFDKNDIEIV 122
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
RIKE++++ ++PAVA+DGGDI F+GY+DGIV++ ++GACSGCPSA+ TLK GV N+L++
Sbjct: 123 NRIKELMESYIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLSY 182
Query: 179 FVPEVKDIR 187
+PE+ I
Sbjct: 183 HIPEIAGIE 191
>gi|58697437|ref|ZP_00372735.1| NifU domain protein [Wolbachia endosymbiont of Drosophila simulans]
gi|58536136|gb|EAL59746.1| NifU domain protein [Wolbachia endosymbiont of Drosophila simulans]
Length = 190
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 90/189 (47%), Positives = 130/189 (68%), Gaps = 4/189 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E+TPNP TLKF+PG +L EG FSNA E + S LA+ +F I + V+FG+D
Sbjct: 1 MFIQIEETPNPNTLKFLPGFEILNEGETTDFSNANEIKNSKLAANLFQIEHVVRVFFGHD 60
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K +W+ L+ +L IM+HF SG + G+ D + D F ++D +V
Sbjct: 61 FISVTKLGGINWDTLKVEILTTIMDHFTSGGKALDKEGVNDNNIPD--EEFFDKNDIEIV 118
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
RIKE++++ ++PAVA+DGGDI F+GY+DGIV++ ++GACSGCPSA+ TLK GV N+L++
Sbjct: 119 NRIKELMESYIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLSY 178
Query: 179 FVPEVKDIR 187
+PE+ I
Sbjct: 179 HIPEIAGIE 187
>gi|87199010|ref|YP_496267.1| nitrogen-fixing NifU-like [Novosphingobium aromaticivorans DSM
12444]
gi|87134691|gb|ABD25433.1| nitrogen-fixing NifU-like protein [Novosphingobium aromaticivorans
DSM 12444]
Length = 195
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 84/191 (43%), Positives = 129/191 (67%), Gaps = 3/191 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+TE TPNPATLKF+PG+ V+ G F + +EAE SPLA +F + + V FG DF
Sbjct: 4 MFIETETTPNPATLKFLPGEQVMASGTREFVSHEEAEASPLAQALFDLGDVTGVLFGRDF 63
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDM--KLDDMGSGDFIESDSAV 117
++V W L+P VL ++++HF++ P+ G G + D +D+ +
Sbjct: 64 VSVTAAPGVAWADLKPQVLSLLLDHFVAQAPLFAPGSAGGIVVPADADEDFADDPADADI 123
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ +IK++++ RVRPAVA DGGDI+++G+R+G+V+L M+GACSGCPS++ TLK G+ ++L
Sbjct: 124 IDQIKDLIETRVRPAVANDGGDIIYRGFREGVVYLKMQGACSGCPSSTATLKNGIESLLK 183
Query: 178 HFVPEVKDIRT 188
H+VPEV ++R
Sbjct: 184 HYVPEVSEVRA 194
>gi|220678984|emb|CAX14771.1| novel protein similar to HIRA interacting protein 5 (hirip5,
zgc:110319) [Danio rerio]
Length = 233
Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats.
Identities = 76/185 (41%), Positives = 111/185 (60%), Gaps = 10/185 (5%)
Query: 7 DTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK- 65
DTPNP +LKF+PG+ VL G F + AE SPLA +F I GI SV++G DFIT+ K
Sbjct: 35 DTPNPRSLKFLPGKPVLGTGTQDFPTSASAESSPLARDLFQISGIKSVFYGPDFITLTKT 94
Query: 66 -DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEV 124
D +W ++ + +I + F G+ I + + E D +V IKE+
Sbjct: 95 DDDVEWTDIKRHAIEVISKFFEGGEAITTGAAHAESSVT--------EDDDEIVSLIKEL 146
Query: 125 LDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVK 184
LD R+RP V DGGD++FKG+ DG V L + G+C+GCPS++ TLK G+ N++ ++PEV
Sbjct: 147 LDTRIRPTVQEDGGDVIFKGFEDGTVKLKLVGSCTGCPSSTVTLKNGIQNMMQFYIPEVD 206
Query: 185 DIRTV 189
++ V
Sbjct: 207 NVEQV 211
>gi|296817809|ref|XP_002849241.1| HIRA-interacting protein 5 [Arthroderma otae CBS 113480]
gi|238839694|gb|EEQ29356.1| HIRA-interacting protein 5 [Arthroderma otae CBS 113480]
Length = 304
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 76/203 (37%), Positives = 119/203 (58%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FI+T+ TPN LKF P VL EG + + + SPLA+++ ++ G+
Sbjct: 72 IFIETDTTPNADALKFRPNHPVLPEGFPVSFLEYLTPRSTLQPPYPSPLAAKLLNVDGVV 131
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-----NGGLGDMKLDDMG 106
SV+FG DFITV KD +W H++P V +I E +G+ +I+ G G + +
Sbjct: 132 SVFFGSDFITVTKDSDANWAHIKPEVFSLITEAITTGEALINIVDVRPGKEGAEEAEMEE 191
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ + E D +V I+E+L+ R+RPA+ DGGDI F+G+ +G V L +RGAC C S++
Sbjct: 192 AVRYNEEDEEIVGMIQELLETRIRPAIQEDGGDIEFRGFENGNVMLKLRGACRTCDSSTV 251
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ ++L H++ EVK + V
Sbjct: 252 TLKNGIESMLMHYIEEVKSVTQV 274
>gi|42520881|ref|NP_966796.1| NifU domain-containing protein [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410621|gb|AAS14730.1| NifU domain protein [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 191
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 91/189 (48%), Positives = 129/189 (68%), Gaps = 7/189 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E+TPNP TLKF+PG +L EG FSNA E + S LA+ +F I + V+FG+D
Sbjct: 5 MFIQIEETPNPNTLKFLPGFEILNEGETADFSNANEIKNSKLAANLFQIEHVVRVFFGHD 64
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K D +W+ L+ VL IM HF SG L +++D F ++D +V
Sbjct: 65 FISVTKLDGINWDILKVEVLTTIMNHFTSG-----GKALDKEEVNDPDEEFFDKNDIEIV 119
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
RIKE++++ ++PAVA+DGGDI F+GY+DGIV++ ++GACSGCPSA+ TLK GV N+L++
Sbjct: 120 NRIKELMESHIKPAVAQDGGDIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLSY 179
Query: 179 FVPEVKDIR 187
+PE+ I
Sbjct: 180 HIPEIAGIE 188
>gi|315052166|ref|XP_003175457.1| hypothetical protein MGYG_02982 [Arthroderma gypseum CBS 118893]
gi|311340772|gb|EFQ99974.1| hypothetical protein MGYG_02982 [Arthroderma gypseum CBS 118893]
Length = 301
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 74/202 (36%), Positives = 116/202 (57%), Gaps = 13/202 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FI+T+ TPN LKF P VL EG + + N + SPLA+++ ++ G
Sbjct: 72 IFIETDTTPNADALKFRPNHPVLPEGFPVSFLEYLNPRSTLQPPYPSPLAAKLLNVDGAV 131
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH----NGGLGDMKLDDMGS 107
SV+FG DFITV KD +W H++P + +I E G+ +++ G + +
Sbjct: 132 SVFFGSDFITVTKDSDANWAHIKPEIFSLITEAITRGEALVNVVDVRPGKEGAEEVGEEA 191
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASET 167
+ E D +V I+E+L+ R+RPA+ DGGDI F+G+ +G V L +RGAC C S++ T
Sbjct: 192 VRYNEEDEEIVGMIQELLETRIRPAIQEDGGDIEFRGFENGNVLLKLRGACRTCDSSTVT 251
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
LK G+ ++L H++ EVK + V
Sbjct: 252 LKNGIESMLMHYIEEVKSVTQV 273
>gi|330799706|ref|XP_003287883.1| hypothetical protein DICPUDRAFT_20344 [Dictyostelium purpureum]
gi|325082086|gb|EGC35580.1| hypothetical protein DICPUDRAFT_20344 [Dictyostelium purpureum]
Length = 203
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 79/191 (41%), Positives = 117/191 (61%), Gaps = 7/191 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQTE TPNP +LKFIPG VL +G + F + K +++SPLA+ +F I G+ V+F D
Sbjct: 4 IFIQTETTPNPDSLKFIPGVEVLSDGQIMDFPDFKSSQVSPLANSLFKIEGVNRVFFSSD 63
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K + DW L+P + G I++ + SG PI+ D + DS VV
Sbjct: 64 FISVNKYPEQDWAALKPEIYGAIIDFYNSGSPILSE-----HSSDINTDTTILPEDSEVV 118
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+++ R+RP V DGG+I + G+ DGIV + ++G CS C S+ TLK G+ +L H
Sbjct: 119 AMIKELIETRIRPTVLEDGGNIKYMGFADGIVLVQLQGTCSSCSSSQATLKGGIERMLMH 178
Query: 179 FVPEVKDIRTV 189
++ EVK + +
Sbjct: 179 WIAEVKGVVAI 189
>gi|320585764|gb|EFW98443.1| NifU [Grosmannia clavigera kw1407]
Length = 370
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 79/209 (37%), Positives = 117/209 (55%), Gaps = 24/209 (11%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIASVYF 56
TE TPN +KF+P VL EG I + + + SPLA+++ ++ G+ +V++
Sbjct: 121 TESTPNADAIKFLPNHQVLPEGIASPFIEYLSPRATIAPPYPSPLAAQLMNVDGVTAVFY 180
Query: 57 GYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPII---------------HNGGLGDM 100
G DFITV K +W H+RP V +I E SG I+ +G +
Sbjct: 181 GSDFITVTKATDANWAHIRPEVFALITEAITSGQAIVRPSATGSAGAEGVDGTHGEGAEA 240
Query: 101 KLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSG 160
+ S + E+DS VV IKE+L+ R+RPA+ DGGDI F+G+ DG V L +RGAC
Sbjct: 241 EAVHEDSLQYNENDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGEVLLKLRGACRT 300
Query: 161 CPSASETLKYGVANILNHFVPEVKDIRTV 189
C S++ TLK G+ ++L H++ EVK +R V
Sbjct: 301 CDSSTVTLKNGIESMLMHYIEEVKVVRQV 329
>gi|118356024|ref|XP_001011271.1| NifU-like domain containing protein [Tetrahymena thermophila]
gi|89293038|gb|EAR91026.1| NifU-like domain containing protein [Tetrahymena thermophila SB210]
Length = 225
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 75/194 (38%), Positives = 119/194 (61%), Gaps = 12/194 (6%)
Query: 1 MFIQTEDTPNPATLKFIP-GQVVLVEGA-IHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+FIQ + TPNP LKF+P G+ V+ +G + F A+ A +SPLA ++F+I G+ V++G
Sbjct: 25 LFIQAKSTPNPNFLKFVPSGKTVMNDGTTLDFIAARYAHVSPLAKKLFTIDGVNRVFYGK 84
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
D+I++ K + DW L+P + +I E F P+ + + + DS
Sbjct: 85 DYISISKKEDADWNELKPQIFSLITEQFTGTTPLFTDE-------PEREDTKIKDDDSEA 137
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANI 175
VQ IKE++D R+RP V DGGD++++ + + GIV L+M G+CSGCPS+ TLK G+ +
Sbjct: 138 VQMIKEIIDTRIRPLVQDDGGDVIYRNFDEPSGIVTLTMMGSCSGCPSSQVTLKQGIEKM 197
Query: 176 LNHFVPEVKDIRTV 189
+ H+VPEV + +V
Sbjct: 198 IMHYVPEVNGVESV 211
>gi|145507614|ref|XP_001439762.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406957|emb|CAK72365.1| unnamed protein product [Paramecium tetraurelia]
Length = 207
Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats.
Identities = 81/192 (42%), Positives = 120/192 (62%), Gaps = 5/192 (2%)
Query: 1 MFIQTEDTPNPATLKFIP-GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQ + TPNP LKFIP G+ V++ G FS +EA+ SPLA ++F I G+ V++G D
Sbjct: 10 LFIQAKPTPNPNFLKFIPDGKQVMLNGTYDFSRPREAKCSPLAQKLFMIDGVNRVFYGKD 69
Query: 60 FITVGKDQYD-WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+I++ K++ WE L+P + IMEH+ + D ++ E DS +
Sbjct: 70 YISISKNEESKWEELKPQIFEQIMEHYQLDAEGKEKQLIIDGYSENQ-DTQIKEEDSEAI 128
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANIL 176
Q IKE++D R+RP V DGGDIVF+ + +GIV L M+G+C+GCPS+S TLK G+ +L
Sbjct: 129 QLIKEIIDTRIRPTVQEDGGDIVFRDFDEQNGIVHLYMKGSCAGCPSSSITLKNGIERML 188
Query: 177 NHFVPEVKDIRT 188
H+V EVK++
Sbjct: 189 CHYVAEVKEVVA 200
>gi|302657114|ref|XP_003020287.1| hypothetical protein TRV_05641 [Trichophyton verrucosum HKI 0517]
gi|291184105|gb|EFE39669.1| hypothetical protein TRV_05641 [Trichophyton verrucosum HKI 0517]
Length = 304
Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats.
Identities = 75/203 (36%), Positives = 116/203 (57%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FI+T+ TPN LKF P VL EG + + + SPLA+++ ++ G
Sbjct: 72 IFIETDTTPNADALKFRPNHPVLPEGFPVSFLEYLTPRSTLQPPYPSPLAAKLLNVDGAV 131
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-----NGGLGDMKLDDMG 106
SV+FG DFITV KD +W H++P + +I E G+ +++ G G +
Sbjct: 132 SVFFGSDFITVTKDSDANWAHIKPEIFSLITEAITRGEALVNVVDVRQGKEGAEGAEAEE 191
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ + E D VV I+E+L+ R+RPA+ DGGDI F+G+ +G V L +RGAC C S++
Sbjct: 192 AVRYNEEDEEVVGMIQELLETRIRPAIQEDGGDIEFRGFENGNVLLKLRGACRTCDSSTV 251
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ ++L H++ EVK + V
Sbjct: 252 TLKNGIESMLMHYIEEVKSVTQV 274
>gi|148697451|gb|EDL29398.1| mCG14627 [Mus musculus]
Length = 181
Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats.
Identities = 79/174 (45%), Positives = 107/174 (61%), Gaps = 8/174 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + FS A SPLA ++F I G+ SV+FG DF
Sbjct: 1 MFIQTQDTPNPNSLKFIPGKRVLETRTMDFSTPAAAFRSPLARQLFRIEGVKSVFFGPDF 60
Query: 61 ITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ + DW L+P + IM+ F SG P++ + E D VV
Sbjct: 61 ITVTKENGELDWNLLKPDIHATIMDFFASGLPLVTE------ETPPPPGEAGSEEDDGVV 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
IKE+LD R+RP V DGGD++++ + DGIV L ++G+C CPS+ TLK G+
Sbjct: 115 AMIKELLDTRIRPTVQEDGGDVIYRAFEDGIVRLKLQGSCPSCPSSIITLKSGI 168
>gi|145505407|ref|XP_001438670.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405842|emb|CAK71273.1| unnamed protein product [Paramecium tetraurelia]
Length = 207
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 81/192 (42%), Positives = 121/192 (63%), Gaps = 5/192 (2%)
Query: 1 MFIQTEDTPNPATLKFIPG-QVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQ + TPNP LKFIPG + V++ G F+ +EA+ SPLA ++F I G+ V++G D
Sbjct: 10 LFIQAKPTPNPNFLKFIPGGKQVMLNGTYDFTRPREAKCSPLAQKLFLIDGVTRVFYGKD 69
Query: 60 FITV-GKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+I++ K++ WE ++P + IMEH+ + D ++ E DS VV
Sbjct: 70 YISIAKKEESRWEEIKPQIFEHIMEHYQLDSDGQEKKLIIDGYQENQ-DTQINEDDSEVV 128
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
Q IKE++D R+RP V DGGDIVF+ + + GIV L M+G+C+GCPS+S TLK G+ +L
Sbjct: 129 QLIKEIIDTRIRPTVQEDGGDIVFRDFDEKSGIVQLYMKGSCAGCPSSSVTLKNGIERML 188
Query: 177 NHFVPEVKDIRT 188
H+V EVK++
Sbjct: 189 CHYVAEVKEVVA 200
>gi|289620358|emb|CBI53216.1| unnamed protein product [Sordaria macrospora]
Length = 290
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 77/195 (39%), Positives = 112/195 (57%), Gaps = 29/195 (14%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+FIQTE+TPNP +LKF+P +++ +I G+ SV++G DF
Sbjct: 78 IFIQTENTPNPDSLKFLPN-----------------------TKLMNIDGVTSVFYGTDF 114
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-----NGGLGDMKLDDMGSGDFIESD 114
ITV K +W H+RP V +I E SG I++ G + D+ S + E+D
Sbjct: 115 ITVTKSADANWAHIRPEVFALITETITSGQTIVNVVERREGEENTQESDEKDSLAYDEND 174
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
S VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ TLK G+
Sbjct: 175 SEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGIVKLKLRGACRTCDSSTVTLKNGIEG 234
Query: 175 ILNHFVPEVKDIRTV 189
+L H++ EV+ + V
Sbjct: 235 MLMHYIEEVQGVEQV 249
>gi|326475115|gb|EGD99124.1| NifU domain-containing protein [Trichophyton tonsurans CBS 112818]
gi|326482250|gb|EGE06260.1| scaffold protein Nfu/NifU [Trichophyton equinum CBS 127.97]
Length = 304
Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats.
Identities = 76/203 (37%), Positives = 116/203 (57%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FI+T+ TPN LKF P VL EG + + + SPLA+++ ++ G
Sbjct: 72 IFIETDTTPNADALKFRPNHPVLPEGFPVSFLEYLTPRSTLQPPYPSPLAAKLLNVDGAV 131
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-----NGGLGDMKLDDMG 106
SV+FG DFITV KD +W H++P V +I E G+ +++ G G +
Sbjct: 132 SVFFGSDFITVTKDSDANWAHIKPEVFSLITEAITRGEALVNVVDVRPGKEGAEGAEAEE 191
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ + E D VV I+E+L+ R+RPA+ DGGDI F+G+ +G V L +RGAC C S++
Sbjct: 192 AVRYNEEDEEVVGMIQELLETRIRPAIQEDGGDIEFRGFENGNVLLKLRGACRTCDSSTV 251
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ ++L H++ EVK + V
Sbjct: 252 TLKNGIESMLMHYIEEVKSVTQV 274
>gi|258565761|ref|XP_002583625.1| HIRA-interacting protein 5 [Uncinocarpus reesii 1704]
gi|237907326|gb|EEP81727.1| HIRA-interacting protein 5 [Uncinocarpus reesii 1704]
Length = 316
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 20/206 (9%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNA-----------KEAEISPLASRIFSIP 49
+FIQTE TPN LKFIP VL + F SPLA+++F++
Sbjct: 72 IFIQTETTPNADALKFIPNFTVLPK---DFPTPFLEYLSPRSTLAPPHPSPLAAKLFNVD 128
Query: 50 GIASVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMG-- 106
G++SV++G DFIT+ K W H++P V +I E SG+ +++ D
Sbjct: 129 GVSSVFYGPDFITITKAGDASWAHIKPEVFSLITEAVTSGEQLVNTVAAKDGAEPGQEGS 188
Query: 107 ---SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPS 163
+ ++ E D +V I+E+L+ R+RPA+ DGGDI F+G++DG V L +RGAC C S
Sbjct: 189 AEEAPEYAEEDEEIVGMIQELLETRIRPAIQEDGGDIEFRGFKDGNVMLKLRGACRTCDS 248
Query: 164 ASETLKYGVANILNHFVPEVKDIRTV 189
++ TLK G+ ++L H++ EV + V
Sbjct: 249 STVTLKNGIESMLMHYIEEVTSVTQV 274
>gi|329847368|ref|ZP_08262396.1| scaffold protein Nfu/NifU [Asticcacaulis biprosthecum C19]
gi|328842431|gb|EGF92000.1| scaffold protein Nfu/NifU [Asticcacaulis biprosthecum C19]
Length = 188
Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats.
Identities = 87/194 (44%), Positives = 124/194 (63%), Gaps = 12/194 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP +KF+PGQVVL +G F + EA++SPLA +F I G+++++FG DF
Sbjct: 1 MFIQTEATPNPDVIKFLPGQVVLAQGTKQFVSEDEAKVSPLAEALFKIDGVSALFFGSDF 60
Query: 61 ITVGKD-QYD--WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+TV +D W L+PP+L IM+ + SG PI+ + + +
Sbjct: 61 LTVRRDPDATLIWAQLKPPILAAIMDFYTSGQPILRE-------TEVKTETVYEGELGQI 113
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ IK++LD RVRPAVA+DGGDI F + G ++L MRGAC+GCPS+S TL+ GV ++
Sbjct: 114 IAEIKDLLDTRVRPAVAQDGGDIEFDSFDMESGTLYLHMRGACAGCPSSSATLRQGVESL 173
Query: 176 LNHFVPEVKDIRTV 189
+ H+VPEV+ I V
Sbjct: 174 MKHYVPEVRHIEAV 187
>gi|111035797|emb|CAL29424.1| NifU-related protein [Wolbachia endosymbiont of Onchocerca
volvulus]
Length = 194
Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 130/191 (68%), Gaps = 4/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ ++TPN TLKF+PG ++L EG + FS+A E + S LA+ +F I + V+FG+D
Sbjct: 5 MFIQIKETPNLNTLKFLPGFMILNEGETVDFSSANETKNSKLAANLFRIEHVIRVFFGHD 64
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FI+V K D +W L+ VL IM+HF S + G D D + F +SD+ +V
Sbjct: 65 FISVTKSDDINWNTLKVEVLTTIMDHFASSGKALDREGTNDN--DILEEEFFDKSDTEIV 122
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
RI+E++++ ++PAV +DGGDI F+GY++GIV++ ++GACSGCPSA+ TLK G+ N+L +
Sbjct: 123 SRIRELMESYIKPAVVQDGGDIKFRGYKNGIVYVELQGACSGCPSATITLKQGIQNMLCY 182
Query: 179 FVPEVKDIRTV 189
+PE+ I T+
Sbjct: 183 HIPEILGIDTI 193
>gi|296223650|ref|XP_002757718.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Callithrix jacchus]
Length = 235
Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats.
Identities = 78/193 (40%), Positives = 110/193 (56%), Gaps = 15/193 (7%)
Query: 2 FIQTEDTPNPATLKF---IPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
F+Q P PA F +PG+ VL + F A SPLA ++F I G+ SV+FG
Sbjct: 40 FVQRPLFPLPAA--FCNPVPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGP 97
Query: 59 DFITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
DFITV K+ + DW L+P + IM+ F SG P++ E D
Sbjct: 98 DFITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAG--------SEEDDE 149
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
VV IKE+LD R+RP V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 150 VVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNML 209
Query: 177 NHFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 210 QFYIPEVEGVEQV 222
>gi|169608792|ref|XP_001797815.1| hypothetical protein SNOG_07481 [Phaeosphaeria nodorum SN15]
gi|111063827|gb|EAT84947.1| hypothetical protein SNOG_07481 [Phaeosphaeria nodorum SN15]
Length = 263
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 80/199 (40%), Positives = 117/199 (58%), Gaps = 13/199 (6%)
Query: 4 QTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIASVY 55
+TE TPN LKF P Q VL E + + N + SPLA+++ +I G+ SV+
Sbjct: 24 KTEPTPNDDALKFNPNQRVLPESISSPFLEYLNPRSTLAPPHPSPLAAQLLNIDGVTSVF 83
Query: 56 FGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHN----GGLGDMKLDDMGSGDF 110
G D ITV KD W H++P V +I E SG P+++ G ++ S +
Sbjct: 84 LGLDHITVTKDTSTPWAHIKPEVFAIINEFMTSGQPLVNTIADKGNEQGQGNSEVDSLAY 143
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
E+DS VVQ IKE+L+ R+RP++ DGGDI F+G+ DG V L +RGAC C S++ TLK
Sbjct: 144 DENDSEVVQMIKELLETRIRPSIQEDGGDIDFRGFNDGQVLLKLRGACRTCDSSTVTLKN 203
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ ++L H++ EVK ++ V
Sbjct: 204 GIESMLMHYIEEVKGVQQV 222
>gi|149238520|ref|XP_001525136.1| HIRA-interacting protein 5 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450629|gb|EDK44885.1| HIRA-interacting protein 5 [Lodderomyces elongisporus NRRL YB-4239]
Length = 292
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 81/193 (41%), Positives = 115/193 (59%), Gaps = 9/193 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT +TPN LKF+P +L E F + +EA SPLA R+FSI GI S+ FG +
Sbjct: 68 LFIQTAETPNDHALKFLPSLQILGENETREFLSGREAHSSPLAVRLFSIDGIKSIMFGSN 127
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K QY+W L+P + ++ E+ G PI++ F E D VV
Sbjct: 128 FITIEKLPQYEWALLKPEIFSILTEYLNQGLPIMNEEEGALA-----DDVAFNEDDDEVV 182
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANIL 176
Q IKE++ R+RPA+ DGGDI F +R DG VFL ++GAC C S+S TLK G+ ++L
Sbjct: 183 QMIKELIFTRIRPAIQDDGGDIEFVEFRESDGTVFLRLKGACRSCDSSSVTLKNGIESML 242
Query: 177 NHFVPEVKDIRTV 189
H++ EV+ + +
Sbjct: 243 KHYIEEVQSVEPI 255
>gi|162312172|ref|NP_595452.2| NifU-like protein [Schizosaccharomyces pombe 972h-]
gi|46397296|sp|Q9UUB8|YH9J_SCHPO RecName: Full=NifU-like protein C1709.19c
gi|157310401|emb|CAA21258.2| NifU-like protein [Schizosaccharomyces pombe]
Length = 260
Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 117/194 (60%), Gaps = 10/194 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE--GAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
++I++E+TPN LKF+PG +L G+ F + SPLA ++F I G+ S++FG
Sbjct: 43 IWIRSEETPNENALKFLPGLDILPPTIGSCEFMRGQGTVNSPLAQKLFDIDGVDSIFFGK 102
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
DFITV K +W ++P V +IMEH +G P++ L +ESDS +
Sbjct: 103 DFITVSKGAGTEWAQMKPEVFSVIMEHLSNGSPVLSEEPLKGA-----SDTQILESDSQI 157
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE+++ +RP++ DGGD+ F+G+ + G V L +RGAC C S++ TLK G+ +
Sbjct: 158 VAMIKELIETSIRPSIQEDGGDVEFRGFDEKTGTVSLKLRGACRTCSSSAVTLKNGIQQM 217
Query: 176 LNHFVPEVKDIRTV 189
L H++PEV+++ V
Sbjct: 218 LKHYIPEVENVVQV 231
>gi|23006361|ref|ZP_00048716.1| COG0694: Thioredoxin-like proteins and domains [Magnetospirillum
magnetotacticum MS-1]
Length = 184
Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats.
Identities = 91/179 (50%), Positives = 125/179 (69%), Gaps = 5/179 (2%)
Query: 13 TLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQY--DW 70
TLKF+PG+VVL EG +A AE SPLAS +F++PG++ VYFG+DFI+V K +W
Sbjct: 9 TLKFLPGRVVLTEGTFEARDASSAERSPLASALFAVPGVSGVYFGHDFISVTKADGVNEW 68
Query: 71 EHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVR 130
++P VLG IM+HF SG P++ G +D + E+D V IK++L+ RVR
Sbjct: 69 PQVKPAVLGAIMDHFQSGRPVLAEGT---ALAEDDAEEFYDEADHDTVATIKDLLETRVR 125
Query: 131 PAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
PAVA DGGDI F+GYRDGIV+L M+GACSGCPS++ TL+ GV N+ HF+P V++++ V
Sbjct: 126 PAVAGDGGDITFRGYRDGIVYLEMKGACSGCPSSTATLRQGVQNLFRHFLPSVREVQAV 184
>gi|182678037|ref|YP_001832183.1| scaffold protein Nfu/NifU [Beijerinckia indica subsp. indica ATCC
9039]
gi|182633920|gb|ACB94694.1| Scaffold protein Nfu/NifU [Beijerinckia indica subsp. indica ATCC
9039]
Length = 187
Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats.
Identities = 92/189 (48%), Positives = 139/189 (73%), Gaps = 2/189 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PG+ V+ G + A A+ SPLA +F++ G++ V+FG DF
Sbjct: 1 MFIQTEATPNPATLKFLPGRPVMRLGTLDIREADGAKKSPLAEALFALEGVSGVFFGSDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
I+V + Q DW+ ++P VLG IMEH++SG P++ + D++ + G + E+D+ V
Sbjct: 61 ISVTRQQGDWQDIKPAVLGAIMEHYLSGAPLLTDE--ADLQPQNDGEEFYAEADAHTVAT 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IK+++++ VRPAVA+DGGDI F+G+R+G V+L+M+G+CSGCPS+S TL++GV N+L H+V
Sbjct: 119 IKQLIESHVRPAVAKDGGDIKFRGFREGTVYLAMKGSCSGCPSSSATLRHGVQNLLKHYV 178
Query: 181 PEVKDIRTV 189
PEV + +
Sbjct: 179 PEVVSVEQI 187
>gi|302500846|ref|XP_003012416.1| hypothetical protein ARB_01375 [Arthroderma benhamiae CBS 112371]
gi|291175974|gb|EFE31776.1| hypothetical protein ARB_01375 [Arthroderma benhamiae CBS 112371]
Length = 264
Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats.
Identities = 75/203 (36%), Positives = 115/203 (56%), Gaps = 14/203 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FI+T+ TPN LKF P VL EG + + + SPLA+++ ++ G
Sbjct: 32 IFIETDTTPNADALKFRPNHPVLPEGFPVSFLEYLTPRSTLQPPYPSPLAAKLLNVDGAV 91
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-----NGGLGDMKLDDMG 106
SV+FG DFITV KD +W H++P + +I E G+ +++ G G
Sbjct: 92 SVFFGSDFITVTKDSDANWAHIKPEIFSLITEAITRGEALVNVVDVRQGKEGAEGAGAEE 151
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ + E D VV I+E+L+ R+RPA+ DGGDI F+G+ +G V L +RGAC C S++
Sbjct: 152 AVRYNEEDEEVVGMIQELLETRIRPAIQEDGGDIEFRGFENGNVLLKLRGACRTCDSSTV 211
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ ++L H++ EVK + V
Sbjct: 212 TLKNGIESMLMHYIEEVKSVTQV 234
>gi|226480566|emb|CAX73380.1| HIRA interacting protein 5 [Schistosoma japonicum]
gi|226480792|emb|CAX73493.1| HIRA interacting protein 5 [Schistosoma japonicum]
Length = 233
Score = 230 bits (586), Expect = 9e-59, Method: Composition-based stats.
Identities = 83/190 (43%), Positives = 119/190 (62%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+FIQ ++TPNP +LK+ PGQ VL G F + K+A SPLA ++F I G+ V+FG DF
Sbjct: 25 LFIQAQETPNPNSLKYFPGQAVLGSGTRDFPSRKQAGSSPLARQLFRIEGVEQVFFGPDF 84
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
IT+ K + ++W ++P V IM+ + SG P+I + S E D V
Sbjct: 85 ITITKNNDFEWAVIKPDVYATIMDFYSSGQPVIDEEKSQE-------SDKPCEVDDETVL 137
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+LD R+RP V DGGDI++KG++DGIV L ++G+CS CPS+ TLK GV N+L +
Sbjct: 138 MIKELLDTRIRPTVQEDGGDIIYKGFKDGIVLLKLQGSCSSCPSSVVTLKNGVQNMLQFY 197
Query: 180 VPEVKDIRTV 189
+P+V + V
Sbjct: 198 IPDVLGVEQV 207
>gi|148284929|ref|YP_001249019.1| hypothetical protein OTBS_1710 [Orientia tsutsugamushi str.
Boryong]
gi|189184851|ref|YP_001938636.1| thioredoxin-like protein [Orientia tsutsugamushi str. Ikeda]
gi|146740368|emb|CAM80805.1| conserved hypothetical protein [Orientia tsutsugamushi str.
Boryong]
gi|189181622|dbj|BAG41402.1| thioredoxin-like protein [Orientia tsutsugamushi str. Ikeda]
Length = 182
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 76/190 (40%), Positives = 111/190 (58%), Gaps = 9/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP +LKF P Q + +HFS +E S LA ++FSI + V+FG DF
Sbjct: 1 MFIQTQQTPNPNSLKFFPDQKISPGNPVHFSTREECTHSILARKLFSIENVKEVFFGEDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
ITV K WE ++P +L M+M+HF++G P+ + S + +
Sbjct: 61 ITVTKVSDGSWEVIKPEILTMLMDHFVAGLPVFESEAEKKNIEQANLSEIEKQIIEIINT 120
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+++ PAVA DGGDI + ++DGIV L MRGAC GCPS++ TLK G+ ++L ++
Sbjct: 121 KVR--------PAVAMDGGDIEYHSFKDGIVKLQMRGACVGCPSSTMTLKQGIESLLKYY 172
Query: 180 VPEVKDIRTV 189
+PEV + V
Sbjct: 173 IPEVVSVEQV 182
>gi|254566581|ref|XP_002490401.1| Protein involved in iron metabolism in mitochondria [Pichia
pastoris GS115]
gi|238030197|emb|CAY68120.1| Protein involved in iron metabolism in mitochondria [Pichia
pastoris GS115]
Length = 249
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 112/193 (58%), Gaps = 7/193 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE-GAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT+ TPN LKF+P +L E I F N ++A SPLA ++F I G+ ++ G+D
Sbjct: 21 LFIQTQTTPNDDALKFLPSMKILPEQTTIEFLNGRQAFKSPLALKLFGIDGVKTIMIGHD 80
Query: 60 FITV-GKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K Q DW L+P + ++ E +G P+++ D + + + VV
Sbjct: 81 FITVEKKTQDDWSLLKPEIFAVLTESLNNGTPVLNEQHQSDANDQALLEE---DDEDEVV 137
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFK--GYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+KE++ R+RPA+ DGGDI F Y G V+L +RGAC C S+S TLK G+ ++L
Sbjct: 138 SMVKELIFTRIRPAIQDDGGDIEFVRFEYETGTVYLRLRGACRSCSSSSITLKNGIESML 197
Query: 177 NHFVPEVKDIRTV 189
H++ EV+ + +
Sbjct: 198 KHYIEEVEAVEQI 210
>gi|73667413|ref|YP_303429.1| nitrogen-fixing NifU, C-terminal [Ehrlichia canis str. Jake]
gi|72394554|gb|AAZ68831.1| Nitrogen-fixing NifU, C-terminal [Ehrlichia canis str. Jake]
Length = 186
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 83/190 (43%), Positives = 127/190 (66%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQ E+TPNP TLKF+PG V F++ AE SPLA+ +F + + V+FG DF
Sbjct: 1 MFIQIEETPNPNTLKFMPGVPVNNGKVSEFADNIAAESSPLAAALFKVEHVKGVFFGGDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+++ K D+ +W+ L+P VL +IME ++ G + ++ F E D +V
Sbjct: 61 VSITKSDEIEWDVLKPEVLTVIMEFLT-----LNPGDSTEDFNEEETDEFFDEKDVEMVD 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE++++ V+PAV +DGGDI FKGY +GIVF+ +RGACSGCPSAS TLK G+ N+L+++
Sbjct: 116 KIKELINDYVKPAVMQDGGDIKFKGYSNGIVFVKLRGACSGCPSASITLKEGIYNMLSYY 175
Query: 180 VPEVKDIRTV 189
+P+++ + +V
Sbjct: 176 IPDIQGVESV 185
>gi|301107396|ref|XP_002902780.1| iron-sulfur cluster scaffold protein Nfu-like protein [Phytophthora
infestans T30-4]
gi|262097898|gb|EEY55950.1| iron-sulfur cluster scaffold protein Nfu-like protein [Phytophthora
infestans T30-4]
Length = 217
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 80/195 (41%), Positives = 122/195 (62%), Gaps = 14/195 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA---IHF-SNAKEAEISPLASRIFSIPGIASVYF 56
MFIQTE TPNP ++KF+PG+ VL E + F +++E SPLA ++F I G+ V+F
Sbjct: 1 MFIQTEPTPNPLSVKFLPGRSVLDERFTTGVDFTPSSEEVRRSPLAKKLFQIEGVTRVFF 60
Query: 57 GYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDS 115
G DFI+V K ++ DW+ L + IM+ F S + ++ + + + + D
Sbjct: 61 GKDFISVTKTEEEDWDALNAEIFATIMDFFASDEQVMSDEPI-------VTDTTILPDDD 113
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVA 173
VV IKE+L+ R+RP+V DGGDI +KG+ + G V + + G+C+GCPS+S TLK+GV
Sbjct: 114 EVVAMIKELLEQRIRPSVQDDGGDIFYKGFDEKTGTVSVQLAGSCAGCPSSSVTLKHGVE 173
Query: 174 NILNHFVPEVKDIRT 188
N+L H++PEV+ I
Sbjct: 174 NMLKHYIPEVRGIEE 188
>gi|165933598|ref|YP_001650387.1| mitochondrial-type Fe-S cluster assembly protein NFU [Rickettsia
rickettsii str. Iowa]
gi|165908685|gb|ABY72981.1| mitochondrial-type Fe-S cluster assembly protein NFU [Rickettsia
rickettsii str. Iowa]
Length = 190
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 81/191 (42%), Positives = 126/191 (65%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQT DTPNP + F PGQ + + + FS E + S LA +F I + SV+FG D
Sbjct: 1 MFIQTADTPNPDAITFFPGQKISSDQPVFFSELAEVKGRSKLAESLFYINNVKSVFFGSD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ ++P +L +IM+HF+SG P+ D ++ + S +
Sbjct: 61 FITVTKQAEGNWQVIKPEILMVIMDHFVSGLPVFEENTKADNVNHNL------DGLSEIE 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E+++ RVRP+VA+DGGDI++KG+ +G+V L++RGAC GCPS++ TL+ G+ ++L H
Sbjct: 115 KQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSSTITLRNGIESMLKH 174
Query: 179 FVPEVKDIRTV 189
FVPEV+++ V
Sbjct: 175 FVPEVQEVEAV 185
>gi|157828872|ref|YP_001495114.1| hypothetical protein A1G_05615 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|157801353|gb|ABV76606.1| hypothetical protein A1G_05615 [Rickettsia rickettsii str. 'Sheila
Smith']
Length = 190
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 81/191 (42%), Positives = 126/191 (65%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQT DTPNP + F PGQ + + + FS E + S LA +F I + SV+FG D
Sbjct: 1 MFIQTADTPNPDAITFFPGQEISSDQPVFFSELAEVKGRSKLAESLFYINNVKSVFFGSD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ ++P +L +IM+HF+SG P+ D ++ + S +
Sbjct: 61 FITVTKQAEGNWQVIKPEILMVIMDHFVSGLPVFEENTKADNVNHNL------DGLSEIE 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E+++ RVRP+VA+DGGDI++KG+ +G+V L++RGAC GCPS++ TL+ G+ ++L H
Sbjct: 115 KQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSSTITLRNGIESMLKH 174
Query: 179 FVPEVKDIRTV 189
FVPEV+++ V
Sbjct: 175 FVPEVQEVEAV 185
>gi|57239492|ref|YP_180628.1| hypothetical protein Erum7660 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579471|ref|YP_197683.1| hypothetical protein ERWE_CDS_08070 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161571|emb|CAH58499.1| putative NifU-related protein [Ehrlichia ruminantium str.
Welgevonden]
gi|58418097|emb|CAI27301.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 185
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 84/190 (44%), Positives = 123/190 (64%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQ EDTPNP TLKF+PG V F+++ AE SP A +F I I SV+FG DF
Sbjct: 1 MFIQIEDTPNPNTLKFMPGIPVNNGKIGEFTDSITAESSPFAKALFEIEHIVSVFFGGDF 60
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I+V K +W+ L+P +L +IM+ ++ + ++ F D +V
Sbjct: 61 ISVTKSSDIEWDVLKPEILTVIMDFLT-----LNPNDSVENNDEEDLQEFFDAKDEEIVS 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE++D+ ++PAVA+DGGDI FKGY +GIVF+ +RGACSGCPSAS TLK G+ N+L ++
Sbjct: 116 KIKELIDDYIKPAVAQDGGDIKFKGYSNGIVFVKLRGACSGCPSASITLKEGIYNMLTYY 175
Query: 180 VPEVKDIRTV 189
+P+++ + +V
Sbjct: 176 LPDIQSVESV 185
>gi|58617525|ref|YP_196724.1| hypothetical protein ERGA_CDS_07980 [Ehrlichia ruminantium str.
Gardel]
gi|58417137|emb|CAI28250.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
Length = 185
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 82/190 (43%), Positives = 122/190 (64%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQ EDTPNP TLKF+PG V F+++ AE SP A +F I I V+FG DF
Sbjct: 1 MFIQIEDTPNPNTLKFMPGIPVNNGKIGEFTDSITAESSPFAKALFEIEHIVGVFFGGDF 60
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
++V K +W+ L+P +L +IM+ ++ + ++ F D +V
Sbjct: 61 VSVTKSSDIEWDVLKPEILTVIMDFLT-----LNPNDSVENHDEEDLQEFFDAKDEEIVS 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE++D+ ++PAVA+DGGDI FKGY +GIVF+ +RGACSGCPSAS TLK G+ N+L ++
Sbjct: 116 KIKELIDDYIKPAVAQDGGDIKFKGYSNGIVFVKLRGACSGCPSASITLKEGIYNMLTYY 175
Query: 180 VPEVKDIRTV 189
+P+++ + +V
Sbjct: 176 LPDIQSVESV 185
>gi|260951229|ref|XP_002619911.1| hypothetical protein CLUG_01070 [Clavispora lusitaniae ATCC 42720]
gi|238847483|gb|EEQ36947.1| hypothetical protein CLUG_01070 [Clavispora lusitaniae ATCC 42720]
Length = 243
Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 115/194 (59%), Gaps = 11/194 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT +TPN LKF+P +L E F + +EA ISPLA ++FS+ G+ S+ G +
Sbjct: 23 LFIQTAETPNENALKFLPSTKLLQENETREFLSGREAVISPLAMKLFSVDGVKSIMLGSN 82
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FIT+ K D +W L+P + ++ E +G PII + F E D +
Sbjct: 83 FITIEKSTDDIEWAVLKPEIFSILTEFLTNGTPIISD------DAQLTNDMQFSEDDDEI 136
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE++ R+RPA+ DGGDI F + + G+V+L ++GAC C S+S TLK G+ ++
Sbjct: 137 VSMIKELIFTRIRPAIQDDGGDIEFVSFEENTGVVYLRLKGACRSCDSSSVTLKNGIESM 196
Query: 176 LNHFVPEVKDIRTV 189
L +++ EV+++R V
Sbjct: 197 LKYYIEEVQEVRPV 210
>gi|88658493|ref|YP_507026.1| NifU domain-containing protein [Ehrlichia chaffeensis str.
Arkansas]
gi|88599950|gb|ABD45419.1| NifU domain protein [Ehrlichia chaffeensis str. Arkansas]
Length = 186
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 82/190 (43%), Positives = 125/190 (65%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQ +TPNP TLKF+PG + F+++ AE S LA+ +F I + SV+FG DF
Sbjct: 1 MFIQIGETPNPNTLKFMPGMPINNGKVSEFADSVAAEGSSLATALFKIEYVKSVFFGGDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
++V K D +W+ L+P +L +IME +++ + + F E D +V
Sbjct: 61 VSVTKSDDIEWDVLKPEILTVIMEFLT-----LNSDNATESFDQEELEEFFDEKDIEMVG 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IKE++DN V+PAV +DGGDI FKGY +GIVF+ +RGACSGCPSAS TLK G+ N+L+++
Sbjct: 116 KIKELIDNYVKPAVIQDGGDIKFKGYSNGIVFVKLRGACSGCPSASITLKEGIYNMLSYY 175
Query: 180 VPEVKDIRTV 189
+P+++ + ++
Sbjct: 176 IPDIQGVESI 185
>gi|56417173|ref|YP_154247.1| hypothetical protein AM1146 [Anaplasma marginale str. St. Maries]
gi|222475537|ref|YP_002563954.1| hypothetical protein AMF_868 [Anaplasma marginale str. Florida]
gi|56388405|gb|AAV86992.1| hypothetical protein AM1146 [Anaplasma marginale str. St. Maries]
gi|222419675|gb|ACM49698.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 194
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 126/191 (65%), Gaps = 4/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA-IHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E TPNP L+F+ + G+ I FS+A A+ S LA +F I G++ V+FG D
Sbjct: 6 MFIQIEVTPNPDALRFLLSAEIGAIGSGIEFSDATTAQGSTLARLLFEIQGVSKVFFGGD 65
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F++V K DW+ LRP +L ++ ++F + + D+ F DS VV
Sbjct: 66 FVSVTKLPDADWDTLRPEILVVMTDYFSLHNAYSDAAPQAHEESDE--REFFDTKDSEVV 123
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
QR+KE++++ VRPAVA+DGGDI F+GY++G+VF+ +RGACSGCPSA+ TLK GV +L++
Sbjct: 124 QRVKELIEHYVRPAVAQDGGDIKFRGYKEGVVFVHLRGACSGCPSAAVTLKDGVYGMLSY 183
Query: 179 FVPEVKDIRTV 189
+VPEVK + +V
Sbjct: 184 YVPEVKAVESV 194
>gi|51473845|ref|YP_067602.1| hypothetical protein RT0659 [Rickettsia typhi str. Wilmington]
gi|51460157|gb|AAU04120.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
Length = 190
Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats.
Identities = 83/191 (43%), Positives = 127/191 (66%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTEDTPNP +KF PGQ + ++ + FS E + S LA +F I + SV+FG D
Sbjct: 1 MFIQTEDTPNPDAIKFFPGQEISIDQPVFFSELAEVKGRSTLAESLFHINNVKSVFFGSD 60
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K +W+ ++P +L +IM+HFISG P+ + D + ++ + S +
Sbjct: 61 FITVTKHAGGNWQVIKPEILMVIMDHFISGFPVFNENTKIDNEKHNI------DMLSEIE 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E ++ RVRP V +DGGDI++KG+ G+V L++RGAC GCPS++ TLK G+ ++L H
Sbjct: 115 KQIIETIETRVRPFVTQDGGDIIYKGFESGVVKLALRGACLGCPSSTITLKNGIESMLRH 174
Query: 179 FVPEVKDIRTV 189
F+PEV++++ V
Sbjct: 175 FIPEVQEVQAV 185
>gi|254797154|ref|YP_003081992.1| hira-interacting protein 5 [Neorickettsia risticii str. Illinois]
gi|254590399|gb|ACT69761.1| hira-interacting protein 5 [Neorickettsia risticii str. Illinois]
Length = 180
Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats.
Identities = 77/190 (40%), Positives = 122/190 (64%), Gaps = 11/190 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF PG +L G F A +A + L ++ I G++ V G DF
Sbjct: 1 MFIQTEHTPNPNVLKFFPGVNILDSGIADFVTASDASGNKLPEMLWEIQGVSGVMLGVDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
++V K + +W+ L+P + +++E+F +G + + + +E V +
Sbjct: 61 VSVSKTEDAEWDVLKPQIFSVLVEYFTTGSDFVR----------PVTEDEEVECTDEVSK 110
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+I+E++D +VRP+V DGG++VFKGY+DGIV+L ++GAC+GCPSAS TLK G+ N+L ++
Sbjct: 111 KIREIIDTKVRPSVIEDGGNVVFKGYKDGIVYLKLQGACAGCPSASVTLKDGIENLLQYY 170
Query: 180 VPEVKDIRTV 189
VPEV++++ V
Sbjct: 171 VPEVREVQQV 180
>gi|68490038|ref|XP_711140.1| hypothetical protein CaO19.6283 [Candida albicans SC5314]
gi|68490075|ref|XP_711122.1| hypothetical protein CaO19.13662 [Candida albicans SC5314]
gi|46432400|gb|EAK91883.1| hypothetical protein CaO19.13662 [Candida albicans SC5314]
gi|46432419|gb|EAK91901.1| hypothetical protein CaO19.6283 [Candida albicans SC5314]
Length = 262
Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats.
Identities = 76/194 (39%), Positives = 114/194 (58%), Gaps = 5/194 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL-VEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT +TPN LKF+P +L F + +EA SPLA ++FSI GI SV FG D
Sbjct: 32 LFIQTSETPNEQALKFLPSIKILQDNQTKEFLSGREAASSPLALKLFSIDGIRSVMFGSD 91
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD-FIESDSAV 117
FIT+ K + +DW L+P + ++ E+ +G PI+ + + + + E D V
Sbjct: 92 FITIEKSNNFDWSLLKPEIFSILTEYLTNGTPILLEDNVDEYGNSLLTNDMAINEDDDEV 151
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE++ R+RPA+ DGGDI F + DG V+L ++GAC C S+S TLK G+ ++
Sbjct: 152 VSMIKELIFTRIRPAIQDDGGDIEFVNFNEEDGTVYLRLKGACRSCDSSSVTLKNGIESM 211
Query: 176 LNHFVPEVKDIRTV 189
L H++ EV + +
Sbjct: 212 LKHYIEEVNSVEPI 225
>gi|254995338|ref|ZP_05277528.1| hypothetical protein AmarM_05319 [Anaplasma marginale str.
Mississippi]
gi|255003523|ref|ZP_05278487.1| hypothetical protein AmarPR_04754 [Anaplasma marginale str. Puerto
Rico]
gi|255004646|ref|ZP_05279447.1| hypothetical protein AmarV_05119 [Anaplasma marginale str.
Virginia]
Length = 189
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 126/191 (65%), Gaps = 4/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA-IHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E TPNP L+F+ + G+ I FS+A A+ S LA +F I G++ V+FG D
Sbjct: 1 MFIQIEVTPNPDALRFLLSAEIGAIGSGIEFSDATTAQGSTLARLLFEIQGVSKVFFGGD 60
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F++V K DW+ LRP +L ++ ++F + + D+ F DS VV
Sbjct: 61 FVSVTKLPDADWDTLRPEILVVMTDYFSLHNAYSDAAPQAHEESDE--REFFDTKDSEVV 118
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
QR+KE++++ VRPAVA+DGGDI F+GY++G+VF+ +RGACSGCPSA+ TLK GV +L++
Sbjct: 119 QRVKELIEHYVRPAVAQDGGDIKFRGYKEGVVFVHLRGACSGCPSAAVTLKDGVYGMLSY 178
Query: 179 FVPEVKDIRTV 189
+VPEVK + +V
Sbjct: 179 YVPEVKAVESV 189
>gi|68492023|ref|XP_710207.1| hypothetical protein CaO19.3485 [Candida albicans SC5314]
gi|46431364|gb|EAK90941.1| hypothetical protein CaO19.3485 [Candida albicans SC5314]
Length = 262
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 76/194 (39%), Positives = 114/194 (58%), Gaps = 5/194 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL-VEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT +TPN LKF+P +L F + +EA SPLA ++FSI GI SV FG D
Sbjct: 32 LFIQTSETPNEQALKFLPSIKILQDNQTKEFLSGREAASSPLALKLFSIDGIRSVMFGSD 91
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD-FIESDSAV 117
FIT+ K + +DW L+P + ++ E+ +G PI+ + + + + E D V
Sbjct: 92 FITIEKSNNFDWSLLKPEIFSILTEYLTNGTPILLEDNVDEYGNSLLTNDMAINEDDDEV 151
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE++ R+RPA+ DGGDI F + DG V+L ++GAC C S+S TLK G+ ++
Sbjct: 152 VSMIKELIFTRIRPAIQDDGGDIEFVNFNEEDGTVYLRLKGACRSCDSSSVTLKNGIESM 211
Query: 176 LNHFVPEVKDIRTV 189
L H++ EV + +
Sbjct: 212 LKHYIEEVNSVEPI 225
>gi|88608783|ref|YP_506689.1| NifU-like domain-containing protein [Neorickettsia sennetsu str.
Miyayama]
gi|88600952|gb|ABD46420.1| NifU-like domain protein [Neorickettsia sennetsu str. Miyayama]
Length = 180
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 77/190 (40%), Positives = 120/190 (63%), Gaps = 11/190 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP LKF PG +L G F +A L ++ I G+ V G DF
Sbjct: 1 MFIQTEHTPNPNVLKFFPGVKILDSGTADFVTFSDASGHKLPEMLWEIQGVCGVMLGVDF 60
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
++V K + +W+ L+P + G+++E+F +G + + + +E V +
Sbjct: 61 VSVSKTEDAEWDVLKPQIFGVLVEYFTTGSDFVR----------PVTEDEEVECTDEVSK 110
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+I+E++D +VRP+V DGG+IVFKGY+DGIV+L ++GAC+GCPSAS TLK G+ N+L ++
Sbjct: 111 KIQEIIDTKVRPSVIEDGGNIVFKGYKDGIVYLKLQGACAGCPSASVTLKDGIENLLQYY 170
Query: 180 VPEVKDIRTV 189
+PEV++++ V
Sbjct: 171 IPEVREVQQV 180
>gi|15604511|ref|NP_221029.1| hypothetical protein RP667 [Rickettsia prowazekii str. Madrid E]
gi|3861205|emb|CAA15105.1| unknown [Rickettsia prowazekii]
gi|292572295|gb|ADE30210.1| NifU-like protein [Rickettsia prowazekii Rp22]
Length = 190
Score = 226 bits (578), Expect = 7e-58, Method: Composition-based stats.
Identities = 82/191 (42%), Positives = 126/191 (65%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTE+TPNP +KF PGQ + V+ + FS E + S LA +F I + SV+ G D
Sbjct: 1 MFIQTEETPNPDAIKFFPGQEISVDQPVFFSELAEVKGRSALAESLFHINNVKSVFLGSD 60
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K +W+ ++P +L +IM+HFISG P+ + D + ++ + S +
Sbjct: 61 FITVTKQARGNWQVIKPEILMVIMDHFISGFPVFNENTKIDDEKHNL------DMLSEIE 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E ++ RVRP V +DGGDI++KG+ G+V L++RGAC GCPS++ TLK G+ ++L H
Sbjct: 115 KQIIETIETRVRPFVTQDGGDIIYKGFESGVVKLALRGACLGCPSSTITLKNGIESMLKH 174
Query: 179 FVPEVKDIRTV 189
F+PEV++++ V
Sbjct: 175 FIPEVQEVKAV 185
>gi|327299030|ref|XP_003234208.1| NifU domain-containing protein [Trichophyton rubrum CBS 118892]
gi|326463102|gb|EGD88555.1| NifU domain-containing protein [Trichophyton rubrum CBS 118892]
Length = 288
Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 111/194 (57%), Gaps = 14/194 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
+FI+T+ TPN LKF P VL EG + + + SPLA+++ ++ G
Sbjct: 72 IFIETDTTPNADALKFRPNHPVLPEGFPVSFLEYLTPRSTLQPPYPSPLAAKLLNVDGAV 131
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-----NGGLGDMKLDDMG 106
SV+FG DFITV KD +W H++P + +I E G+ +++ G G +
Sbjct: 132 SVFFGSDFITVTKDSDANWAHIKPEIFSLITEAITRGEALVNVVDVRQGKEGAEGAEAEE 191
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ + E D VV I+E+L+ R+RPA+ DGGDI F+G+ +G V L +RGAC C S++
Sbjct: 192 AVRYNEEDEEVVGMIQELLETRIRPAIQEDGGDIEFRGFENGNVLLKLRGACRTCDSSTV 251
Query: 167 TLKYGVANILNHFV 180
TLK G+ ++L H+V
Sbjct: 252 TLKNGIESMLMHYV 265
>gi|299469630|emb|CBN76484.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 282
Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 79/195 (40%), Positives = 109/195 (55%), Gaps = 14/195 (7%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLV----EGAIHFSNAKEAEISPLASRIFSIPGIASVYFG 57
FIQTE TPNP +LKF+PG+ VL G + +E SPLA + S+ G+A V+ G
Sbjct: 66 FIQTEPTPNPNSLKFLPGRPVLPAEHGTGVYFTPDDREKSQSPLAVALLSLEGVAGVFLG 125
Query: 58 YDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
DFIT+ K D+ W ++P V G IM+ F G P++ +
Sbjct: 126 TDFITISKHDEGGWTLMKPVVFGEIMDFFAEGKPVMLAEPVVTDTTILDDDD-------E 178
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVAN 174
VV IKE+L RVRPAV DGGDI ++G+ G V + + G+C GCPS++ TLK GV
Sbjct: 179 VVAMIKELLQERVRPAVQEDGGDIFYRGFDPNTGTVNVQLAGSCVGCPSSTVTLKNGVEK 238
Query: 175 ILNHFVPEVKDIRTV 189
+L H++PEV + V
Sbjct: 239 MLMHYIPEVTAVNAV 253
>gi|50419691|ref|XP_458373.1| DEHA2C15796p [Debaryomyces hansenii CBS767]
gi|49654039|emb|CAG86455.1| DEHA2C15796p [Debaryomyces hansenii]
Length = 246
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 111/194 (57%), Gaps = 11/194 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT +TPN LKF+P ++ E F + +EA SPLA ++FSI GI S+ FG +
Sbjct: 29 LFIQTMETPNEHALKFLPSMQIMKENETREFLSGREAACSPLALKLFSIDGIKSIMFGSN 88
Query: 60 FITVGKDQYD--WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FIT+ K D W L+P + ++ E +G PI++ + + + E D
Sbjct: 89 FITIEKANEDLHWSLLKPEIFSILTEFLNNGTPILNE------ESELTDDMEISEDDDET 142
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE++ R+RPA+ DGGDI F + +G V+L ++GAC C S+S TLK G+ ++
Sbjct: 143 VTMIKELIFTRIRPAIQDDGGDIEFVSFAEDNGTVYLRLKGACRSCDSSSVTLKNGIESM 202
Query: 176 LNHFVPEVKDIRTV 189
L +++ EV + V
Sbjct: 203 LKYYIEEVTTVEQV 216
>gi|238880174|gb|EEQ43812.1| HIRA-interacting protein 5 [Candida albicans WO-1]
Length = 262
Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats.
Identities = 76/188 (40%), Positives = 112/188 (59%), Gaps = 5/188 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL-VEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT +TPN LKF+P +L F + +EA SPLA ++FSI GI SV FG D
Sbjct: 32 LFIQTSETPNEQALKFLPSIKILQDNQTKEFLSGREAASSPLALKLFSIDGIRSVMFGSD 91
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD-FIESDSAV 117
FIT+ K + +DW L+P + ++ E+ +G PI+ + + + + E D V
Sbjct: 92 FITIEKSNNFDWSLLKPEIFSILTEYLTNGTPILLEDNVDEYGNSLLTNDMAINEDDDEV 151
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE++ R+RPA+ DGGDI F + DG V+L ++GAC C S+S TLK G+ ++
Sbjct: 152 VSMIKELIFTRIRPAIQDDGGDIEFVNFNEEDGTVYLRLKGACRSCDSSSVTLKNGIESM 211
Query: 176 LNHFVPEV 183
L H++ EV
Sbjct: 212 LKHYIEEV 219
>gi|269959159|ref|YP_003328948.1| NifU domain containing protein [Anaplasma centrale str. Israel]
gi|269848990|gb|ACZ49634.1| NifU domain containing protein [Anaplasma centrale str. Israel]
Length = 188
Score = 223 bits (569), Expect = 9e-57, Method: Composition-based stats.
Identities = 86/192 (44%), Positives = 124/192 (64%), Gaps = 7/192 (3%)
Query: 1 MFIQTEDTPNPATLKFIPG-QVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E+TPNP L+F+ VE + FS+A A S LA +F I G++ V+FG D
Sbjct: 1 MFIQIENTPNPDALRFLLSADAGNVESGVEFSDADAARSSALARLLFDIQGVSKVFFGGD 60
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFI-SGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FI+V K DW+ LRP +L ++ ++ G + D F E D+ V
Sbjct: 61 FISVTKLPHADWDTLRPEILVVMTDYLSLRGA----DATPLPAHEDGGEQEFFDEVDTEV 116
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V+R+KE++++ VRPAVA+DGGDI F+GY++G+VF+ +RGACSGCPSA+ TLK GV +L+
Sbjct: 117 VKRVKELIEHYVRPAVAQDGGDIKFRGYKEGVVFVHLRGACSGCPSAAVTLKDGVYGMLS 176
Query: 178 HFVPEVKDIRTV 189
++VPEVK + +V
Sbjct: 177 YYVPEVKAVESV 188
>gi|157804045|ref|YP_001492594.1| NifU-like domain-containing protein [Rickettsia canadensis str.
McKiel]
gi|157785308|gb|ABV73809.1| NifU-like domain [Rickettsia canadensis str. McKiel]
Length = 189
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 119/191 (62%), Gaps = 8/191 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTEDTPNP +KF PGQ + EG I FS E + S LA +F I + SV+FG D
Sbjct: 1 MFIQTEDTPNPDAIKFFPGQEINSEGPIFFSELAEVKGKSKLAESLFHINNVKSVFFGSD 60
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ ++P +L +IM+HF+SG P+ D ++ IE +
Sbjct: 61 FITVTKQPESNWQVIKPEILMVIMDHFVSGFPVFEESTKADNVQHNLDGLLEIEKQIIEI 120
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
RVRP+VA+DGGDI++K + +G+V L +RGAC GCPS++ TLK G+ ++L H
Sbjct: 121 IE------TRVRPSVAQDGGDIIYKCFENGVVKLVLRGACLGCPSSTITLKNGIESMLKH 174
Query: 179 FVPEVKDIRTV 189
FVPEV+ + V
Sbjct: 175 FVPEVQAVEAV 185
>gi|241959110|ref|XP_002422274.1| nifU-like protein, mitochondrial precursor, putative; protein
involved in iron metabolism in mitochondria, putative
[Candida dubliniensis CD36]
gi|223645619|emb|CAX40278.1| nifU-like protein, mitochondrial precursor, putative [Candida
dubliniensis CD36]
Length = 302
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 77/188 (40%), Positives = 113/188 (60%), Gaps = 5/188 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL-VEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT +TPN LKF+P +L F + +EA SPLA ++FSI GI SV FG D
Sbjct: 77 LFIQTSETPNEQALKFLPSIKILQDNQTKEFLSGREAASSPLALKLFSIDGIRSVMFGSD 136
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD-FIESDSAV 117
FIT+ K + +DW L+P + ++ E+ +G PI+ G+ + + + E D V
Sbjct: 137 FITIEKLNNFDWSLLKPEIFSILTEYLTNGTPILLEDGVDEDGNSLLTNDMAINEDDDEV 196
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE++ R+RPA+ DGGDI F + DG V+L ++GAC C S+S TLK G+ ++
Sbjct: 197 VSMIKELIFTRIRPAIQDDGGDIEFVNFNEEDGTVYLRLKGACRSCDSSSVTLKNGIESM 256
Query: 176 LNHFVPEV 183
L H++ EV
Sbjct: 257 LKHYIEEV 264
>gi|241761631|ref|ZP_04759718.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|260753996|ref|YP_003226889.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|241373939|gb|EER63472.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|258553359|gb|ACV76305.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 183
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 83/190 (43%), Positives = 124/190 (65%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M I+TE TPNPATLKF+ + V+ + +F N +EA SPLA +F + + +V++G DF
Sbjct: 1 MLIETEKTPNPATLKFLLHRPVMERESRYFVNKEEAADSPLAVALFDLQHVTAVFYGRDF 60
Query: 61 ITVGKDQYD-WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I+V D W +L ++ +I +HF + P++ + + + V+
Sbjct: 61 ISVTLDSPSLWSNLESKIIMIISDHFDNDIPLLVENS-------EKNETKDHDEEDDVIL 113
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK+++D+RVRPAVARDGGDIVF+ + DGIV+LSMRGAC+GCPS+ TLK GV +L HF
Sbjct: 114 QIKDLIDSRVRPAVARDGGDIVFQKFEDGIVYLSMRGACAGCPSSVATLKQGVETLLKHF 173
Query: 180 VPEVKDIRTV 189
VPE+K++R +
Sbjct: 174 VPEIKEVRAI 183
>gi|150864668|ref|XP_001383601.2| hypothetical protein PICST_82838 [Scheffersomyces stipitis CBS
6054]
gi|149385924|gb|ABN65572.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 254
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 78/194 (40%), Positives = 117/194 (60%), Gaps = 11/194 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT +TPN + LKF+P +L E I F + +EA SPLA ++FSI GI S+ FG +
Sbjct: 33 LFIQTVETPNESALKFLPSIKLLEENETIEFLSGREAARSPLAVKLFSIDGIKSIMFGSN 92
Query: 60 FITVGKDQYD--WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FIT+ K+ D W L+P + ++ E+ +G PI+ +G + + + D V
Sbjct: 93 FITIEKNSNDLHWSLLKPEIFSILTEYLTNGTPILIDGESLSKDM------EINDDDDEV 146
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE++ R+RPA+ DGGDI F + DG VFL ++GAC C S+S TLK G+ ++
Sbjct: 147 VSIIKELIFTRIRPAIQDDGGDIEFVSFREEDGTVFLRLKGACRSCDSSSVTLKNGIESM 206
Query: 176 LNHFVPEVKDIRTV 189
L +++ EVK + V
Sbjct: 207 LKYYIEEVKAVEQV 220
>gi|283856470|ref|YP_163150.2| scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ZM4]
gi|283775474|gb|AAV90039.2| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ZM4]
Length = 183
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 83/190 (43%), Positives = 124/190 (65%), Gaps = 8/190 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M I+TE TPNPATLKF+ + V+ + +F N +EA SPLA +F + + +V++G DF
Sbjct: 1 MLIETEKTPNPATLKFLLHRPVMERESRYFVNKEEAADSPLAVALFDLQHVTAVFYGRDF 60
Query: 61 ITVGKDQYD-WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I+V D W +L ++ +I +HF + P++ + + + V+
Sbjct: 61 ISVTLDSPSLWSNLESKIIMIISDHFDNDIPLLVENF-------EKNEIKDHDEEDDVIL 113
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK+++D+RVRPAVARDGGDIVF+ + DGIV+LSMRGAC+GCPS+ TLK GV +L HF
Sbjct: 114 QIKDLIDSRVRPAVARDGGDIVFQKFEDGIVYLSMRGACAGCPSSVATLKQGVETLLKHF 173
Query: 180 VPEVKDIRTV 189
VPE+K++R +
Sbjct: 174 VPEIKEVRAI 183
>gi|67458659|ref|YP_246283.1| NifU-like domain-containing protein [Rickettsia felis URRWXCal2]
gi|67004192|gb|AAY61118.1| NifU-like domain [Rickettsia felis URRWXCal2]
Length = 190
Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats.
Identities = 81/181 (44%), Positives = 121/181 (66%), Gaps = 8/181 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTEDTPNP +KF PGQ + E + FS+ E + S LA +F I + SV+FG D
Sbjct: 1 MFIQTEDTPNPDAIKFFPGQEISSEQPVFFSDISEVKGRSKLAESLFYINNVKSVFFGSD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ ++P VL +IM+HF+SG P+ D ++ + S +
Sbjct: 61 FITVTKQAESNWQVIKPEVLMVIMDHFVSGFPVFEESTKADNVNHNL------DGLSEIE 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E+++ RVRP+VA+DGGDI++KG+ +G+V L++RGAC GCPS++ TLK G+ ++L H
Sbjct: 115 KQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSSTITLKNGIESMLKH 174
Query: 179 F 179
F
Sbjct: 175 F 175
>gi|134114121|ref|XP_774308.1| hypothetical protein CNBG2890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256943|gb|EAL19661.1| hypothetical protein CNBG2890 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 309
Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats.
Identities = 87/192 (45%), Positives = 120/192 (62%), Gaps = 7/192 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPN A+LKFIPG V A F + + A SPLA+R+ +I GI V+FG DF
Sbjct: 80 MFIQTETTPNEASLKFIPGVQVTNGAAHEFLDLRSALQSPLATRLLTIDGITGVFFGPDF 139
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+T KD Y W L+P V ++MEHF SG + G D +++DS +V
Sbjct: 140 VTCSKDDSYSWSILKPEVFAVLMEHFSSGASLFKEGSGESQAED----TRILDTDSEIVG 195
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ RVRPA+ DGGDI ++G+ + G+V L ++G+C GC S+S TLK G+ +L
Sbjct: 196 MIKELLETRVRPAIMEDGGDIEYRGFDEDTGLVKLKLKGSCRGCSSSSVTLKNGIERMLT 255
Query: 178 HFVPEVKDIRTV 189
H+VPEV+ + V
Sbjct: 256 HYVPEVQSVEQV 267
>gi|58269446|ref|XP_571879.1| iron ion homeostasis-related protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228115|gb|AAW44572.1| iron ion homeostasis-related protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 309
Score = 220 bits (562), Expect = 5e-56, Method: Composition-based stats.
Identities = 87/192 (45%), Positives = 120/192 (62%), Gaps = 7/192 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPN A+LKFIPG V A F + + A SPLA+R+ +I GI V+FG DF
Sbjct: 80 MFIQTETTPNEASLKFIPGVQVTNGAAHEFLDLRSALQSPLATRLLTIDGITGVFFGPDF 139
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+T KD Y W L+P V ++MEHF SG + G D +++DS +V
Sbjct: 140 VTCSKDDSYSWSILKPEVFAVLMEHFSSGASLFKEGSGESQAED----TRILDTDSEIVG 195
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ RVRPA+ DGGDI ++G+ + G+V L ++G+C GC S+S TLK G+ +L
Sbjct: 196 MIKELLETRVRPAIMEDGGDIEYRGFDEDTGLVKLKLKGSCRGCSSSSVTLKNGIERMLT 255
Query: 178 HFVPEVKDIRTV 189
H+VPEV+ + V
Sbjct: 256 HYVPEVQSVEQV 267
>gi|224009450|ref|XP_002293683.1| nifu-like protein [Thalassiosira pseudonana CCMP1335]
gi|220970355|gb|EED88692.1| nifu-like protein [Thalassiosira pseudonana CCMP1335]
Length = 210
Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats.
Identities = 80/196 (40%), Positives = 116/196 (59%), Gaps = 15/196 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHF----SNAKEAEISPLASRIFSIP-GIASVY 55
+FIQT TPNP +LKFIP + F + SPLA ++F++ GI S+Y
Sbjct: 15 LFIQTATTPNPESLKFIPNGRLNNTDTAGFYVTRKDHTLIARSPLAKQLFNLDIGIKSLY 74
Query: 56 FGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD 114
GYDFITV K + W+HL+ P+ G IM+ + SG P + ++ +E D
Sbjct: 75 LGYDFITVTKFAEAHWQHLQTPIFGAIMDFYASGKPALRGE-------PEITDTTILEDD 127
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGV 172
VV IKE+L++R+RPAV DGGDI + G+ + G+V + + G+C GCPS+S TLK GV
Sbjct: 128 DEVVAMIKELLESRIRPAVQEDGGDIRYVGFEEETGLVTVQLAGSCVGCPSSSVTLKNGV 187
Query: 173 ANILNHFVPEVKDIRT 188
N+L H++PEV + +
Sbjct: 188 ENMLMHYIPEVTAVIS 203
>gi|321261141|ref|XP_003195290.1| iron homeostasis-related protein [Cryptococcus gattii WM276]
gi|317461763|gb|ADV23503.1| Iron homeostasis-related protein, putative [Cryptococcus gattii
WM276]
Length = 309
Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats.
Identities = 88/192 (45%), Positives = 120/192 (62%), Gaps = 7/192 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPN A+LKFIPG V A F + + A SPLA+R+ +I GI V+FG DF
Sbjct: 80 MFIQTETTPNEASLKFIPGVQVTNGAAHEFLDLRSALQSPLATRLLTIDGITGVFFGPDF 139
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+T KD Y W L+P V ++MEHF SG + G D +++DS +V
Sbjct: 140 VTCSKDDSYSWSILKPEVFAVLMEHFSSGASLFKEGSGESQAED----TRILDTDSEIVG 195
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+L+ RVRPA+ DGGDI ++G+ + GIV L ++G+C GC S+S TLK G+ +L
Sbjct: 196 MIKELLETRVRPAIMEDGGDIEYRGFDEVTGIVKLKLKGSCRGCSSSSVTLKNGIERMLT 255
Query: 178 HFVPEVKDIRTV 189
H+VPEV+ + V
Sbjct: 256 HYVPEVQSVEQV 267
>gi|239946652|ref|ZP_04698405.1| type Fe-S cluster assembly protein NFU [Rickettsia endosymbiont of
Ixodes scapularis]
gi|241563470|ref|XP_002401717.1| conserved hypothetical protein [Ixodes scapularis]
gi|215501909|gb|EEC11403.1| conserved hypothetical protein [Ixodes scapularis]
gi|239920928|gb|EER20952.1| type Fe-S cluster assembly protein NFU [Rickettsia endosymbiont of
Ixodes scapularis]
Length = 190
Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats.
Identities = 78/181 (43%), Positives = 119/181 (65%), Gaps = 8/181 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTEDTPNP +KF PGQ ++ + + FS E + S LA +F I + SV+FG D
Sbjct: 1 MFIQTEDTPNPDAIKFFPGQEIISDQPVFFSELAEVKGRSKLAESLFHINNVKSVFFGSD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ ++P +L +IM+HF++G P+ + + S +
Sbjct: 61 FITVTKQAEGNWQVIKPEILMVIMDHFVAGFPVFEESTKAGNVNHSL------DGLSEIE 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E+++ RVRP+VA+DGGDI++KG+ +GIV L++RGAC GCPS++ TLK G+ ++L H
Sbjct: 115 KQIVEIIETRVRPSVAQDGGDIIYKGFENGIVKLALRGACLGCPSSTITLKNGIESMLKH 174
Query: 179 F 179
F
Sbjct: 175 F 175
>gi|323451223|gb|EGB07101.1| hypothetical protein AURANDRAFT_54041 [Aureococcus anophagefferens]
Length = 232
Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 79/198 (39%), Positives = 114/198 (57%), Gaps = 15/198 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE-----GAIHFSNAK-EAEISPLASRIFSIPGIASV 54
+FIQ E TPNP +LKF+P Q VL E HF E SPLA ++F+I G+ +
Sbjct: 18 VFIQVEKTPNPFSLKFVPSQAVLGEEHQDKSGFHFHRGDTEYLRSPLAKKLFAIDGVTGI 77
Query: 55 YFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES 113
+ DF+TV K++ W ++P V G IM+ + G P + + +
Sbjct: 78 FLARDFVTVSKNEDGAWATIKPHVFGHIMDFYAEGLPAVEDALPA------ASDTLITDD 131
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYG 171
DS VV IKE+++ R+RPAV DGGDI F+G+ + G+V + + G+C GCPS+S TL+ G
Sbjct: 132 DSEVVAMIKELVEARIRPAVQEDGGDIFFRGFDEATGVVKVELAGSCVGCPSSSVTLRNG 191
Query: 172 VANILNHFVPEVKDIRTV 189
V N+L H++ EVK I V
Sbjct: 192 VENMLMHYIAEVKAIENV 209
>gi|295673142|ref|XP_002797117.1| LiPid Depleted family member [Paracoccidioides brasiliensis Pb01]
gi|226282489|gb|EEH38055.1| LiPid Depleted family member [Paracoccidioides brasiliensis Pb01]
Length = 317
Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 77/202 (38%), Positives = 115/202 (56%), Gaps = 16/202 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEA----EISPLASRIFSIPGIA 52
+FIQTE+TPN LKFIP VL E + + + + SPLAS++ ++ G++
Sbjct: 82 IFIQTENTPNADALKFIPNHSVLPENFPTTFLEYLSPRSTLAPPYPSPLASKLLNVDGVS 141
Query: 53 SVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIH-NGGLGDMKLDDMGSGDF 110
+V++G DFIT+ K +W H++P V +I E +GDPI+ + + + S +
Sbjct: 142 AVFYGPDFITITKAGDANWAHIKPEVFSLITEAVTAGDPIVTISEAGAGSQAQEEDSLSY 201
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
E D VV IKE+L+ R+RPA+ DGGDI F+G+ DGIV L +RGAC C S++ K
Sbjct: 202 NEDDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFDDGIVNLKLRGACRTCDSST---KL 258
Query: 171 GVANILNHF---VPEVKDIRTV 189
V + H + EVK + V
Sbjct: 259 FVPTLRGHAEISIEEVKGVNQV 280
>gi|256419768|ref|YP_003120421.1| nitrogen-fixing NifU domain protein [Chitinophaga pinensis DSM
2588]
gi|256034676|gb|ACU58220.1| nitrogen-fixing NifU domain protein [Chitinophaga pinensis DSM
2588]
Length = 198
Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats.
Identities = 72/189 (38%), Positives = 108/189 (57%), Gaps = 3/189 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+ I TE TPNP T+KF+ +++ I F + A+ SPLA +FS P I V+ +F
Sbjct: 9 ISIYTEMTPNPETMKFVANKLLYPGKHIDFPDEASAKPSPLAVELFSFPFIRGVFIMANF 68
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
IT+ K DW + P + + E+ P+I+ + K + + D+ VV+
Sbjct: 69 ITLTKTPDTDWNDIIPTIKAFLKEYLEDNRPVINEEEIVVTKA--AATNEVSADDTDVVK 126
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
RIKE+L+N V+PAV DGG I FK Y DG V L ++G+CSGCPS+ TLK G+ ++
Sbjct: 127 RIKELLENYVKPAVEMDGGAIQFKDYDDGTVTLMLQGSCSGCPSSMITLKAGIEGMMKRM 186
Query: 180 VPEVKDIRT 188
+PEVK++
Sbjct: 187 IPEVKEVVA 195
>gi|254455619|ref|ZP_05069048.1| nitrogen-fixing NifU domain protein [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082621|gb|EDZ60047.1| nitrogen-fixing NifU domain protein [Candidatus Pelagibacter sp.
HTCC7211]
Length = 179
Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats.
Identities = 73/190 (38%), Positives = 117/190 (61%), Gaps = 12/190 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MF+QTE TPNP +LKF+PG+ V G K+ + L I SI G+ ++ G DF
Sbjct: 1 MFVQTEVTPNPNSLKFLPGKKVSNSGPFEI-TKKDGIKNDLVRNILSINGVEGIFLGEDF 59
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I+V K D+ +W+ ++ V+ +I + + G + D + ++ + Q
Sbjct: 60 ISVNKNDEINWDEIKHIVISLINDFYSDGKEFVI----------DEDAEQSDDNLDEIEQ 109
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+I ++LD ++RPAVARDGGDI FK ++DG+V + ++G+CSGCPS++ TLK GV N+L H+
Sbjct: 110 KIVKILDQKIRPAVARDGGDIKFKEFKDGVVKVQLQGSCSGCPSSTMTLKQGVQNLLCHY 169
Query: 180 VPEVKDIRTV 189
+PEVK++ +
Sbjct: 170 LPEVKEVIAI 179
>gi|221104801|ref|XP_002157169.1| PREDICTED: similar to HIRA interacting protein 5 [Hydra
magnipapillata]
Length = 267
Score = 216 bits (552), Expect = 8e-55, Method: Composition-based stats.
Identities = 83/194 (42%), Positives = 115/194 (59%), Gaps = 12/194 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFI+ +DTPNP +LKFIPG VL G + F SPLA ++F I G+ S++FG DF
Sbjct: 59 MFIRVQDTPNPNSLKFIPGCKVLESGTVDFPTPSHGYRSPLARQLFRIKGVRSIFFGKDF 118
Query: 61 ITVGK---DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
IT+ K D W L+P + +IM+ F S P++ + + E D+
Sbjct: 119 ITISKSDDDDVSWVLLKPDIYAVIMDFFASNLPVLTDDVPAQDTIAA-------EDDNET 171
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE+LD R+RP V DGGDI+FKG+ GIV L ++G+CS CPS+S TLK GV N+
Sbjct: 172 VLLIKELLDTRIRPTVQEDGGDIIFKGFDSVSGIVKLKLQGSCSSCPSSSVTLKNGVQNM 231
Query: 176 LNHFVPEVKDIRTV 189
+ ++PEV + V
Sbjct: 232 MQFYIPEVTGVEEV 245
>gi|76155328|gb|AAX26597.2| SJCHGC03039 protein [Schistosoma japonicum]
Length = 222
Score = 216 bits (552), Expect = 8e-55, Method: Composition-based stats.
Identities = 80/177 (45%), Positives = 112/177 (63%), Gaps = 8/177 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+FIQ ++TPNP +LK+ PGQ VL G F + K+A SPLA ++F I G+ V+FG DF
Sbjct: 53 LFIQAQETPNPNSLKYFPGQAVLGSGTRDFPSRKQAGSSPLARQLFRIEGVEQVFFGPDF 112
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
IT+ K + ++W ++P V IM+ + SG P+I + S E D V
Sbjct: 113 ITITKNNDFEWAVIKPDVYATIMDFYSSGQPVIDEEKSQE-------SDKPCEVDDETVL 165
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+LD R+RP V DGGDI++KG++DGIV L ++G+CS CPS+ TLK GV N+L
Sbjct: 166 MIKELLDTRIRPTVQEDGGDIIYKGFKDGIVLLKLQGSCSSCPSSVVTLKNGVQNML 222
>gi|116781621|gb|ABK22181.1| unknown [Picea sitchensis]
Length = 181
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 72/169 (42%), Positives = 101/169 (59%), Gaps = 8/169 (4%)
Query: 23 LVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK-DQYDWEHLRPPVLGMI 81
+ G+ F NA+ A SPLA ++ I G+A ++FG DFITV K ++ W+ L+P + I
Sbjct: 1 MEVGSADFPNARVAMGSPLAKSLYGIDGVARIFFGSDFITVTKSEEVSWDILKPEIFAAI 60
Query: 82 MEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIV 141
M+ + SG P+ + G E D V IKE+L+ R+RPAV DGGDI
Sbjct: 61 MDFYSSGQPLFLDSKSG-----APTDTAINEDDDETVAMIKELLETRIRPAVQDDGGDIE 115
Query: 142 FKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
+ G+ G+V L M+GACSGCPS+S TLK G+ N+L H+VPEVK +
Sbjct: 116 YCGFDPETGVVKLKMQGACSGCPSSSLTLKSGIENMLMHYVPEVKGVEQ 164
>gi|255726880|ref|XP_002548366.1| hypothetical protein CTRG_02663 [Candida tropicalis MYA-3404]
gi|240134290|gb|EER33845.1| hypothetical protein CTRG_02663 [Candida tropicalis MYA-3404]
Length = 261
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 7/193 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT +TPN LKF+P +L E F + +EA SPLA ++FSI GI SV +G D
Sbjct: 32 LFIQTSETPNEQALKFLPSIQILGENQTKEFLSGREAACSPLAVKLFSIDGIKSVMYGSD 91
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FIT+ K + W L+P + ++ E+ +G PI+ + DDM + VV
Sbjct: 92 FITIEKSENIAWPLLKPEIFSILTEYLTNGSPILLENDKNGIITDDMAFDEDD---DEVV 148
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE++ R+RPA+ DGGDI F + +G V+L ++GAC C S+S TLK G+ ++L
Sbjct: 149 SMIKELIFTRIRPAIQDDGGDIEFIKFEPDNGTVYLKLKGACRSCDSSSVTLKNGIESML 208
Query: 177 NHFVPEVKDIRTV 189
H++ EV + +
Sbjct: 209 KHYIEEVNSVEPI 221
>gi|190345080|gb|EDK36900.2| hypothetical protein PGUG_00997 [Meyerozyma guilliermondii ATCC
6260]
Length = 236
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 72/185 (38%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT DTPN LKF+P +L E + F + +EA SPLA ++FS+ GI SV FG +
Sbjct: 27 LFIQTADTPNEHALKFLPSMSILKENETLEFLSGREAARSPLAVKLFSVDGIKSVMFGSN 86
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FIT+ K + W ++P + ++ EH +G P+I++ + + E D V
Sbjct: 87 FITIEKSANSNQWAVMKPEIFSILTEHLTTGAPVINDEY------ELSNDMEINEDDDEV 140
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE++ R+RPA+ DGGDI F + + G V+L ++GAC C S+S TLK G+ ++
Sbjct: 141 VAMIKELIFTRIRPAIQEDGGDIEFAKFDEDSGTVYLKLKGACRSCESSSVTLKNGIESM 200
Query: 176 LNHFV 180
L H++
Sbjct: 201 LKHYI 205
>gi|238650984|ref|YP_002916840.1| hypothetical protein RPR_06295 [Rickettsia peacockii str. Rustic]
gi|238625082|gb|ACR47788.1| hypothetical protein RPR_06295 [Rickettsia peacockii str. Rustic]
Length = 190
Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats.
Identities = 78/181 (43%), Positives = 119/181 (65%), Gaps = 8/181 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTEDTPNP + F PGQ + + + FS E + S LA +F I + SV+FG D
Sbjct: 1 MFIQTEDTPNPDAITFFPGQEISSDQPVFFSELAEVKGRSKLAESLFYINNVKSVFFGSD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ ++P +L +IM+HF+SG P+ D ++ + S +
Sbjct: 61 FITVTKQAEGNWQVIKPEILMVIMDHFVSGLPVFEENTKADNVNHNL------DGLSEIE 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E+++ RVRP+VA+DGGDI++KG+ +G+V L++RGAC GCPS++ TLK G+ ++L H
Sbjct: 115 KQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSSTITLKNGIESMLKH 174
Query: 179 F 179
F
Sbjct: 175 F 175
>gi|146423384|ref|XP_001487621.1| hypothetical protein PGUG_00997 [Meyerozyma guilliermondii ATCC
6260]
Length = 236
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 72/185 (38%), Positives = 110/185 (59%), Gaps = 11/185 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FIQT DTPN LKF+P +L E + F + +EA SPLA ++FS+ GI SV FG +
Sbjct: 27 LFIQTADTPNEHALKFLPSMSILKENETLEFLSGREAARSPLAVKLFSVDGIKSVMFGSN 86
Query: 60 FITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
FIT+ K + W ++P + ++ EH +G P+I++ + + E D V
Sbjct: 87 FITIEKLANSNQWAVMKPEIFLILTEHLTTGAPVINDEY------ELSNDMEINEDDDEV 140
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANI 175
V IKE++ R+RPA+ DGGDI F + + G V+L ++GAC C S+S TLK G+ ++
Sbjct: 141 VAMIKELIFTRIRPAIQEDGGDIEFAKFDEDSGTVYLKLKGACRSCESSSVTLKNGIESM 200
Query: 176 LNHFV 180
L H++
Sbjct: 201 LKHYI 205
>gi|15892941|ref|NP_360655.1| hypothetical protein RC1018 [Rickettsia conorii str. Malish 7]
gi|15620134|gb|AAL03556.1| unknown [Rickettsia conorii str. Malish 7]
Length = 190
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 78/181 (43%), Positives = 119/181 (65%), Gaps = 8/181 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTEDTPNP + F PGQ + + + FS E + S LA +F I + SV+FG D
Sbjct: 1 MFIQTEDTPNPDAITFFPGQEISSDQPVFFSELAEVKGRSKLAESLFYINNVKSVFFGSD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ ++P +L +IM+HF+SG P+ D ++ + S +
Sbjct: 61 FITVTKQAEGNWQVIKPEILMVIMDHFVSGFPVFEENTKADNVNHNL------DGLSEIE 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E+++ RVRP+VA+DGGDI++KG+ +G+V L++RGAC GCPS++ TLK G+ ++L H
Sbjct: 115 KQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSSTITLKNGIESMLKH 174
Query: 179 F 179
F
Sbjct: 175 F 175
>gi|71083083|ref|YP_265802.1| NifU-like domain-containing protein [Candidatus Pelagibacter ubique
HTCC1062]
gi|91762490|ref|ZP_01264455.1| NifU-like domain protein [Candidatus Pelagibacter ubique HTCC1002]
gi|71062196|gb|AAZ21199.1| NifU-like domain protein [Candidatus Pelagibacter ubique HTCC1062]
gi|91718292|gb|EAS84942.1| NifU-like domain protein [Candidatus Pelagibacter ubique HTCC1002]
Length = 180
Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 72/190 (37%), Positives = 121/190 (63%), Gaps = 11/190 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP +LKF+PG+ V G+ +E + + L I SI G+ V+ G DF
Sbjct: 1 MFIQTEVTPNPNSLKFLPGKTVSNNGSFEVIKKEETD-NELVRNILSINGVTGVFLGEDF 59
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I++ K ++ +WE ++ + +I + + +G + + + G+ E + + +
Sbjct: 60 ISINKNEEVNWEDIKHIAISLINDFYSTGKEFV---------IANELLGEKKEEHTEIEK 110
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+I +L++++RPAVA+DGGDI FK ++DGIV + ++G+CSGCPS++ TLK GV N+L H+
Sbjct: 111 QIISILESKIRPAVAKDGGDIKFKEFKDGIVKVELQGSCSGCPSSTMTLKQGVQNLLCHY 170
Query: 180 VPEVKDIRTV 189
+PEVK++ +
Sbjct: 171 LPEVKEVVAI 180
>gi|303274691|ref|XP_003056661.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461013|gb|EEH58306.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 190
Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats.
Identities = 76/178 (42%), Positives = 116/178 (65%), Gaps = 9/178 (5%)
Query: 15 KFIPGQVVLVEGA-IHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQY-DWEH 72
F+PG+ V + ++F+ +EA SPLA ++F+I G+ SV+FG D++TV K++ +W
Sbjct: 1 MFMPGKPVNPDAPPLNFATPREAMASPLAKKLFAIDGVVSVFFGADYVTVTKNETHEWGV 60
Query: 73 LRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPA 132
L+P V +M+H+ SGDP++ + + D +V IKE+L+ R+RPA
Sbjct: 61 LKPEVFAAVMDHYASGDPLVSDDAELVAAGTA-----IADDDDEIVAMIKELLETRIRPA 115
Query: 133 VARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
VA DGGDIV+KG+ + G+V + MRGAC GCPS+S TLK G+ N+L H+VPEVK++
Sbjct: 116 VAEDGGDIVYKGWDESTGVVTVQMRGACDGCPSSSVTLKSGIENMLRHYVPEVKEVVQ 173
>gi|34581359|ref|ZP_00142839.1| hypothetical protein [Rickettsia sibirica 246]
gi|229587020|ref|YP_002845521.1| NifU-like protein [Rickettsia africae ESF-5]
gi|28262744|gb|EAA26248.1| unknown [Rickettsia sibirica 246]
gi|228022070|gb|ACP53778.1| NifU-like protein [Rickettsia africae ESF-5]
Length = 190
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 78/181 (43%), Positives = 119/181 (65%), Gaps = 8/181 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTEDTPNP + F PGQ + + + FS E + S LA +F I + SV+FG D
Sbjct: 1 MFIQTEDTPNPDAITFFPGQEISSDQPVFFSELAEVKGRSKLAESLFYINNVKSVFFGSD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ ++P +L +IM+HF+SG P+ D ++ + S +
Sbjct: 61 FITVTKQAEGNWQVIKPEILMVIMDHFVSGFPVFEENTKADNVNHNL------DGLSEIE 114
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E+++ RVRP+VA+DGGDI++KG+ +G+V L++RGAC GCPS++ TLK G+ ++L H
Sbjct: 115 KQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSSTITLKNGIESMLKH 174
Query: 179 F 179
F
Sbjct: 175 F 175
>gi|110636788|ref|YP_676995.1| thioredoxin-like protein [Cytophaga hutchinsonii ATCC 33406]
gi|110279469|gb|ABG57655.1| thioredoxin-related protein [Cytophaga hutchinsonii ATCC 33406]
Length = 191
Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats.
Identities = 68/187 (36%), Positives = 105/187 (56%), Gaps = 7/187 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ TE TPNP TLKFI + ++ EG++ F A AE PL +F + V+ +FIT
Sbjct: 8 VYTEATPNPNTLKFITDKTLVEEGSVDFPMASSAESCPLVLDLFRFDFVKRVFMAANFIT 67
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K + +WE + + +I + G P+ + + +E + VV +I
Sbjct: 68 VTKSEGMEWEEVSGMIKSLIKGYIEEGKPLFKE------THKPLSNTAPVEGEPEVVTKI 121
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
K VLD +RPAV +DGG I F+ + DG+V + ++G+CSGCPS++ TLK G+ N+L VP
Sbjct: 122 KVVLDEYIRPAVEQDGGAINFESFVDGVVKVQLQGSCSGCPSSTVTLKSGIENLLKRMVP 181
Query: 182 EVKDIRT 188
EV ++
Sbjct: 182 EVTEVVA 188
>gi|157964815|ref|YP_001499639.1| NifU-like protein [Rickettsia massiliae MTU5]
gi|157844591|gb|ABV85092.1| NifU-like protein [Rickettsia massiliae MTU5]
Length = 191
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 77/181 (42%), Positives = 118/181 (65%), Gaps = 8/181 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQT DTPNP + F PGQ + + + FS E + S LA +F I + SV+FG D
Sbjct: 2 MFIQTADTPNPDAITFFPGQEISSDQPVFFSELAEVQGRSKLAESLFHINNVKSVFFGSD 61
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ ++P +L +IM+HF+SG P+ D ++ + S +
Sbjct: 62 FITVTKQAEGNWQVIKPEILMVIMDHFVSGFPVFEENTKADNVNHNL------DGLSEIE 115
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++I E+++ RVRP+VA+DGGDI++KG+ +G+V L++RGAC GCPS++ TLK G+ ++L H
Sbjct: 116 KQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPSSTITLKNGIESMLKH 175
Query: 179 F 179
F
Sbjct: 176 F 176
>gi|115376684|ref|ZP_01463912.1| NifU domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310823922|ref|YP_003956280.1| NIF system FeS cluster assembly, NifU family protein [Stigmatella
aurantiaca DW4/3-1]
gi|115366301|gb|EAU65308.1| NifU domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309396994|gb|ADO74453.1| NIF system FeS cluster assembly, NifU family protein [Stigmatella
aurantiaca DW4/3-1]
Length = 187
Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats.
Identities = 74/189 (39%), Positives = 118/189 (62%), Gaps = 8/189 (4%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYDFI 61
IQ E TPNP+TLK++ + +L GA++F+ +EA + SPLA ++ I G+ +V G +F+
Sbjct: 5 IQLEWTPNPSTLKYVVDRRLLSSGAVNFTRREEAEQKSPLARKLMDIQGVTAVMLGLNFV 64
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
TV K D+ +W+ L V+ + H S +P++ + + E S+V QR
Sbjct: 65 TVTKGDEGEWDELNDAVMSTLDAHLGSDEPVVDEAAVAAARAAPA------EGGSSVEQR 118
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I+E+LD +RPAVA+DGGDI Y +G+V+L M+G+CSGCPS++ TLK G+ L +
Sbjct: 119 IREILDAEIRPAVAQDGGDITLDRYENGVVYLHMQGSCSGCPSSTATLKMGIEGRLREAI 178
Query: 181 PEVKDIRTV 189
PEV ++ ++
Sbjct: 179 PEVTEVVSI 187
>gi|296448206|ref|ZP_06890103.1| Scaffold protein Nfu/NifU [Methylosinus trichosporium OB3b]
gi|296254290|gb|EFH01420.1| Scaffold protein Nfu/NifU [Methylosinus trichosporium OB3b]
Length = 183
Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats.
Identities = 100/189 (52%), Positives = 134/189 (70%), Gaps = 6/189 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNP+TLKF+PG+ VL GA F +A+ A SPLA + +I G+ +V FG DF
Sbjct: 1 MFIQTESTPNPSTLKFLPGRPVLAAGAREFRDAQAAAASPLAGALLAINGVEAVMFGPDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
++V K +W HL+P VLG IMEHF SG PI+ + G + + F +D+ +V
Sbjct: 61 VSVTKADAEWAHLKPAVLGTIMEHFTSGAPIVLDEG------EAAPAEFFDPADAELVAT 114
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+KE+L RV PAVARDGGDI F+G+RDGIV+L+M+G+CSGCPS+S TLK GV N+L H+V
Sbjct: 115 LKELLVTRVTPAVARDGGDIAFRGFRDGIVYLAMKGSCSGCPSSSATLKNGVENLLRHYV 174
Query: 181 PEVKDIRTV 189
P+V+ + V
Sbjct: 175 PQVRSVEQV 183
>gi|88606830|ref|YP_504700.1| NifU domain-containing protein [Anaplasma phagocytophilum HZ]
gi|88597893|gb|ABD43363.1| NifU domain protein [Anaplasma phagocytophilum HZ]
Length = 188
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 80/192 (41%), Positives = 126/192 (65%), Gaps = 7/192 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA-IHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
MFIQ E TPNP TLKF+ V+ + F +A +A+ SPLA +F + G+ V+FG D
Sbjct: 1 MFIQIESTPNPDTLKFLLSAEVVGINSGAEFLSADDAQASPLARLLFEVEGVEKVFFGGD 60
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEH-FISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
F+++ K + WE L+P VL ++ ++ + G + +D F E DS +
Sbjct: 61 FVSITKAENILWEVLKPEVLVVMTDYCLLQG----TDKEHVQASAEDEEKEFFDEKDSEI 116
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
VQ++KE+++N V+PAVA+DGGDI F+GY++G+VF+ +RGACSGCPSA+ TLK GV +L+
Sbjct: 117 VQQVKELIENYVKPAVAQDGGDIKFRGYKEGVVFVKLRGACSGCPSAAVTLKDGVYGMLS 176
Query: 178 HFVPEVKDIRTV 189
+++P +K + ++
Sbjct: 177 YYIPAIKAVESI 188
>gi|148666783|gb|EDK99199.1| mCG130855, isoform CRA_c [Mus musculus]
Length = 219
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 71/156 (45%), Positives = 94/156 (60%), Gaps = 7/156 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 69 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 128
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K ++ DW L+P + IM+ F SG P++ G E D VV
Sbjct: 129 ITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETP-----PPPGEAGSSEEDDEVV 183
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSM 154
IKE+LD R+RP V DGGD++++G+ DGIV L +
Sbjct: 184 AMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKL 219
>gi|108761437|ref|YP_634156.1| NifU family protein [Myxococcus xanthus DK 1622]
gi|108465317|gb|ABF90502.1| NifU family protein [Myxococcus xanthus DK 1622]
Length = 188
Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats.
Identities = 73/189 (38%), Positives = 117/189 (61%), Gaps = 7/189 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYDFI 61
IQ E TPNP+TLK++ + +L GA++F+N ++A+ SPLA ++ + G+ +V G +F+
Sbjct: 5 IQLEWTPNPSTLKYVVDRRLLAGGAVNFTNPEDAQAKSPLARKLMDVRGVTAVMIGTNFV 64
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
TV K ++ +W+ L V+ + H + +P++ L + SG V R
Sbjct: 65 TVTKGEEGEWDELNDEVMSALDTHLTANEPVVDEAALAAAREAAGPSGG-----GTVEGR 119
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I+++LDN +RPAVA DGGDI + DGIV+L M+GAC+GCPS++ TLK G+ L +
Sbjct: 120 IQDILDNEIRPAVAMDGGDITLDRFEDGIVYLHMKGACAGCPSSTATLKMGIEGRLREMI 179
Query: 181 PEVKDIRTV 189
PEV ++ +V
Sbjct: 180 PEVLEVVSV 188
>gi|219130127|ref|XP_002185224.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403403|gb|EEC43356.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 195
Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats.
Identities = 78/197 (39%), Positives = 118/197 (59%), Gaps = 18/197 (9%)
Query: 1 MFIQTEDTPNPATLKFIP-GQVVL---VEGAIHFSN----AKEAEISPLASRIFSIPGIA 52
+FIQT DTPNP +LKF+P G VL +G + AKE SPLA +F + G+
Sbjct: 6 IFIQTADTPNPESLKFVPTGVAVLTDNPDGNGFYVTKNDPAKEILRSPLAKSLFDVEGVK 65
Query: 53 SVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI 111
+VY G DF+TV K ++ W+ LRP + ++M S P + +++ ++ +
Sbjct: 66 AVYLGGDFVTVTKYAEHKWKILRPQLFDVLMNWADSEKPAL-------LEMPEITDTTIM 118
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLK 169
E D +V IKE++++R+RPAV DGGDI + + + GIV + + G+C GCPS+S TLK
Sbjct: 119 EDDDEIVAMIKELIESRIRPAVQEDGGDIRYVSFEEETGIVTVELAGSCVGCPSSSVTLK 178
Query: 170 YGVANILNHFVPEVKDI 186
GV N+L H++PEV +
Sbjct: 179 QGVENMLMHYIPEVSSV 195
>gi|241950625|ref|XP_002418035.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223641374|emb|CAX43334.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 237
Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats.
Identities = 69/193 (35%), Positives = 112/193 (58%), Gaps = 14/193 (7%)
Query: 4 QTEDTPNPATLKFIP---GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+T TPNP LKFI + + + F+ +A SPLA +F IPG+ SV GYDF
Sbjct: 19 KTLPTPNPNALKFISPECNILPMEDKTFEFTTTLQAIHSPLALTLFKIPGVKSVMLGYDF 78
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGD-PIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+TV K +W +LRP ++ + E S P+I + + + + E +S ++
Sbjct: 79 LTVNKQDYINWANLRPEIVEHLDEFLTSKKHPVITKELVDEAQREA-------EEESELI 131
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+++ R+RPA+ DGGDI KG+ + G VF+ ++GAC C ++ +TLK+G+ ++L
Sbjct: 132 SMIKELIETRIRPAIQDDGGDIELKGFDEETGTVFVKLQGACKSCSASEDTLKHGIESML 191
Query: 177 NHFVPEVKDIRTV 189
H+V EVK++ +
Sbjct: 192 MHYVEEVKEVIQI 204
>gi|149248632|ref|XP_001528703.1| hypothetical protein LELG_01223 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448657|gb|EDK43045.1| hypothetical protein LELG_01223 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 248
Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats.
Identities = 72/201 (35%), Positives = 117/201 (58%), Gaps = 15/201 (7%)
Query: 1 MFIQTEDTPNPATLKFI-PGQVVLV--EGAIHFSNAKEAEISPLASRIFSIPGIASVYFG 57
+ +T TPN LKFI P +L F++ +A SPLA ++F IPG+ S+ G
Sbjct: 17 LHFKTASTPNENALKFISPESPILPVANTTFEFNSTLQAIHSPLALQLFKIPGVKSIMLG 76
Query: 58 YDFITVGK-DQYDWEHLRPPVLGMIMEHFI-----SGD-PIIHNGGLGDMKLDDMGSGDF 110
+DF+TV K D +DW L P V+ ++ + SG P++ L + + +
Sbjct: 77 HDFLTVNKLDNHDWNSLSPEVMDVMNKFLDKAGENSGKVPVVTQELLNKAESERLAED-- 134
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETL 168
E DS +V IKE+++ R+RPA+ DGGDI +KG+ + G VFL ++GAC C ++ +TL
Sbjct: 135 -EDDSELVLMIKELIETRIRPAIQDDGGDIEYKGFDEETGTVFLKLQGACKSCSASEDTL 193
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ ++L H++ EVK+++ +
Sbjct: 194 KGGIESMLMHYIEEVKEVQQI 214
>gi|71654974|ref|XP_816097.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70881201|gb|EAN94246.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 280
Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 4/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQ-VVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ ++T +TPNP L+F + L G ++ F NA A SPLA +FSI G+ +VY
Sbjct: 62 LLVETSETPNPDCLRFYSMELSFLKPGFSMDFPNAGHAYKSPLAEILFSIDGVEAVYIAD 121
Query: 59 DFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
++ITV K DW+ + P + I E S I+ G + + + + D V
Sbjct: 122 EYITVRKGHLVDWDSILPMIKESIAEFAESKVNILSEEGEELLSGHN-EDTEPKDDDDEV 180
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ +KE+L R+RP + DGG++ + DG VF+ + GAC CPSAS TLK G+ +L
Sbjct: 181 ILAVKELLATRIRPMLQADGGNVRYLDMDDGTVFVLLEGACKSCPSASVTLKNGIERMLM 240
Query: 178 HFVPEVKDIRT 188
H++PEV +++
Sbjct: 241 HWIPEVVEVQE 251
>gi|126131446|ref|XP_001382248.1| hypothetical protein PICST_76567 [Scheffersomyces stipitis CBS
6054]
gi|126094073|gb|ABN64219.1| nitrogen fixing protein [Scheffersomyces stipitis CBS 6054]
Length = 242
Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 68/192 (35%), Positives = 110/192 (57%), Gaps = 8/192 (4%)
Query: 4 QTEDTPNPATLKFIP---GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
QT TPNP LKFI + + F++ ++ SPLA R+F IPG+ SV G +F
Sbjct: 18 QTLPTPNPNALKFISPECNILPMAGKTFEFTSTLQSVHSPLALRLFKIPGVRSVMLGENF 77
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W +LRP V+ ++ + + L D + + DS +V
Sbjct: 78 LTVNKQDHINWANLRPEVVELMDDFLTTKQEPSITKELVDQSQQESEVAE--AEDSEIVS 135
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+++ R+RPA+ DGGDI +K + + G VFL ++GAC C S+ +TLK+G+ ++L
Sbjct: 136 MIKELIETRIRPAIQDDGGDIEYKAFDEETGTVFLKLQGACKSCSSSEDTLKHGIESMLM 195
Query: 178 HFVPEVKDIRTV 189
H++ EV+++ +
Sbjct: 196 HYIEEVREVVQI 207
>gi|255723790|ref|XP_002546824.1| hypothetical protein CTRG_01129 [Candida tropicalis MYA-3404]
gi|240134715|gb|EER34269.1| hypothetical protein CTRG_01129 [Candida tropicalis MYA-3404]
Length = 237
Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats.
Identities = 69/193 (35%), Positives = 109/193 (56%), Gaps = 13/193 (6%)
Query: 4 QTEDTPNPATLKFIP---GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+T TPNP LKFI + + + F+ +A SPLA +F IPG+ SV G+DF
Sbjct: 18 KTLPTPNPNALKFISEECNILPMEDKTFEFTTTMQAMHSPLALMLFKIPGVNSVMLGHDF 77
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISG-DPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+TV K +W +LRP ++ + E S P+I + D + + DS ++
Sbjct: 78 LTVNKQDYINWANLRPEIVEHLDEFLTSKKQPVITKELI------DKANEESEMDDSELM 131
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+++ R+RPA+ DGGDI KG+ + G VF+ ++GAC C ++ +TLK G+ +L
Sbjct: 132 SMIKELIETRIRPAIQDDGGDIELKGFDEETGTVFVKLQGACKSCSASEDTLKSGIEGML 191
Query: 177 NHFVPEVKDIRTV 189
H++ EVK++ V
Sbjct: 192 MHYIEEVKEVVQV 204
>gi|322824715|gb|EFZ30028.1| hypothetical protein TCSYLVIO_3695 [Trypanosoma cruzi]
Length = 280
Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats.
Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 4/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQ-VVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ ++T +TPNP L+F + L G ++ F NA A SPLA +FSI G+ +VY
Sbjct: 62 LLVETSETPNPDCLRFYSMELSFLKPGFSMDFPNAGHAYKSPLAEILFSIDGVEAVYIAD 121
Query: 59 DFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
++ITV K DW+ + P + I E S I+ G + + + + D V
Sbjct: 122 EYITVRKGHLVDWDAILPMIKESIAEFAESKVNILSEEGEELLSGHN-EDTEPKDDDDEV 180
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ +KE+L R+RP + DGG++ + DG VF+ + GAC CPSAS TLK G+ +L
Sbjct: 181 ILAVKELLATRIRPMLQADGGNVRYLDMDDGTVFVLLEGACKSCPSASVTLKNGIERMLM 240
Query: 178 HFVPEVKDIRT 188
H++PEV +++
Sbjct: 241 HWIPEVVEVQE 251
>gi|68472639|ref|XP_719638.1| hypothetical protein CaO19.9614 [Candida albicans SC5314]
gi|68472898|ref|XP_719514.1| hypothetical protein CaO19.2067 [Candida albicans SC5314]
gi|46441335|gb|EAL00633.1| hypothetical protein CaO19.2067 [Candida albicans SC5314]
gi|46441464|gb|EAL00761.1| hypothetical protein CaO19.9614 [Candida albicans SC5314]
Length = 237
Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 112/193 (58%), Gaps = 14/193 (7%)
Query: 4 QTEDTPNPATLKFIP---GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+T TPNP LKFI + + + F+ +A SPLA +F IPG+ SV G+DF
Sbjct: 19 KTLPTPNPNALKFISPECNILPMNDKTFEFTTTLQAIHSPLALTLFKIPGVKSVMLGHDF 78
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGD-PIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+TV K +W +LRP ++ + E S P+I + + + + E +S ++
Sbjct: 79 LTVNKQDYINWANLRPEIVEQLDEFLTSKKHPVITKELVDEAQREA-------EEESELI 131
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+++ R+RPA+ DGGDI KG+ + G VF+ ++GAC C ++ +TLK+G+ ++L
Sbjct: 132 SMIKELIETRIRPAIQDDGGDIELKGFDEETGTVFVKLQGACKSCSASEDTLKHGIESML 191
Query: 177 NHFVPEVKDIRTV 189
H+V EVK++ +
Sbjct: 192 MHYVEEVKEVIQI 204
>gi|311745600|ref|ZP_07719385.1| NifU domain protein [Algoriphagus sp. PR1]
gi|126578163|gb|EAZ82383.1| NifU domain protein [Algoriphagus sp. PR1]
Length = 193
Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 109/190 (57%), Gaps = 10/190 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+ + E PNP +LKF+ +++ EG + F +A AE SPLA +F+ + V+ +
Sbjct: 9 VHLYMEANPNPNSLKFVANFMLVDEGVSFDFPDAASAENSPLALELFNFSAVDRVFVASN 68
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+TV K + +W ++ I ++ SG ++ D F E+DS V
Sbjct: 69 FVTVTKKEDVEWSEVQNIFRDHIKKYLESGQAVVKADFDKDP--------LFDENDSETV 120
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++IK +LD +RPAV +DGG IVF + DG+V + ++G+CSGCPS++ TLK G+ N+L
Sbjct: 121 KKIKGILDEYIRPAVEQDGGAIVFHSFHDGVVKVLLQGSCSGCPSSTVTLKAGIQNLLTR 180
Query: 179 FVPEVKDIRT 188
+PEVK++
Sbjct: 181 MLPEVKEVEA 190
>gi|332664007|ref|YP_004446795.1| nitrogen-fixing NifU domain-containing protein [Haliscomenobacter
hydrossis DSM 1100]
gi|332332821|gb|AEE49922.1| nitrogen-fixing NifU domain-containing protein [Haliscomenobacter
hydrossis DSM 1100]
Length = 212
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 66/192 (34%), Positives = 107/192 (55%), Gaps = 5/192 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYD 59
+ + TE TPNP +LKF+ ++ L G F A SPLA+ +F P + VY +
Sbjct: 19 VLLYTEQTPNPESLKFVTNRM-LYRGTADFREVDLATEWSPLATALFDFPYVRGVYVSNN 77
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMK--LDDMGSGDFIESDSA 116
F+TV K+ Y+W + + I + G ++ G + D + ++
Sbjct: 78 FVTVSKELNYEWPDIMLKLKDFIKNYIEEGGELVKEGFAEHISKIEADRAGVAYTGDEAE 137
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+VQ+IKE++D V+PAV DGG+I FK Y +G VF+ M+G+CSGCPS++ TLK G+ +L
Sbjct: 138 LVQKIKELIDTYVKPAVEMDGGNIEFKHYENGKVFVLMQGSCSGCPSSTVTLKAGIEGML 197
Query: 177 NHFVPEVKDIRT 188
+P+V+++
Sbjct: 198 KRMIPQVEEVVQ 209
>gi|71662836|ref|XP_818418.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70883670|gb|EAN96567.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 280
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 66/191 (34%), Positives = 104/191 (54%), Gaps = 4/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQ-VVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ ++T +TPNP L+F + L G ++ F NA A SPLA +FSI G+ +VY
Sbjct: 62 LLVETSETPNPDCLRFYSMELSFLKPGFSMDFPNAGHAYKSPLAEILFSIDGVEAVYIAD 121
Query: 59 DFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
++ITV K DW+ + P + I E ++ G D+ + + D V
Sbjct: 122 EYITVRKGHLVDWDAILPMIKESIEEFAERKMNVLSEEG-EDLLSGHNEDTEPKDDDDEV 180
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ +KE+L R+RP + DGG++ + DG VF+ + GAC CPSAS TLK G+ +L
Sbjct: 181 ILAVKELLATRIRPMLQADGGNVRYLDMDDGTVFVLLEGACKSCPSASVTLKNGIERMLM 240
Query: 178 HFVPEVKDIRT 188
H++PEV +++
Sbjct: 241 HWIPEVVEVQE 251
>gi|260949769|ref|XP_002619181.1| hypothetical protein CLUG_00340 [Clavispora lusitaniae ATCC 42720]
gi|238846753|gb|EEQ36217.1| hypothetical protein CLUG_00340 [Clavispora lusitaniae ATCC 42720]
Length = 237
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 114/193 (59%), Gaps = 10/193 (5%)
Query: 4 QTEDTPNPATLKFIPGQV---VLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+T TPN LKF+ + L FS + +A SPLA ++F + G+ SV G+DF
Sbjct: 17 KTYPTPNENALKFVSPEAEISPLKNKTFEFSTSLQAVHSPLALKLFKLNGVKSVMIGHDF 76
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFIS-GDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+TV K D +W HLRP V+ ++ S +P+I + + D + + E+DS VV
Sbjct: 77 LTVNKLDHVNWAHLRPEVVKLLDSFLTSKDEPVITKELIQQGENDSLSAS---ENDSEVV 133
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE++D R+RPA+ DGGDI +K + + G VFL ++GAC C ++ +TLK G+ ++L
Sbjct: 134 SMIKELIDTRIRPAIQDDGGDIEYKAFDEETGTVFLKLQGACKSCSASEDTLKGGIESML 193
Query: 177 NHFVPEVKDIRTV 189
H++ EVK++ +
Sbjct: 194 MHYIEEVKEVVQI 206
>gi|238881874|gb|EEQ45512.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 237
Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 112/193 (58%), Gaps = 14/193 (7%)
Query: 4 QTEDTPNPATLKFIP---GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+T TPNP LKFI + + + F+ +A SPLA +F IPG+ SV G+DF
Sbjct: 19 KTLPTPNPNALKFISPECNILPMNDKTFEFTTTLQAIHSPLALTLFKIPGVKSVMLGHDF 78
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGD-PIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+TV K +W +LRP ++ + E S P+I + + + + E +S ++
Sbjct: 79 LTVNKQDYINWANLRPGIVEQLDEFLTSKKHPVITKELVDEAQREA-------EEESELI 131
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANIL 176
IKE+++ R+RPA+ DGGDI KG+ + G VF+ ++GAC C ++ +TLK+G+ ++L
Sbjct: 132 SMIKELIETRIRPAIQDDGGDIELKGFDEETGTVFVKLQGACKSCSASEDTLKHGIESML 191
Query: 177 NHFVPEVKDIRTV 189
H+V EVK++ +
Sbjct: 192 MHYVEEVKEVIQI 204
>gi|157826074|ref|YP_001493794.1| hypothetical protein A1C_05170 [Rickettsia akari str. Hartford]
gi|157800032|gb|ABV75286.1| hypothetical protein A1C_05170 [Rickettsia akari str. Hartford]
Length = 190
Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats.
Identities = 77/181 (42%), Positives = 113/181 (62%), Gaps = 8/181 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTEDTPNP +KF PGQ + + + FS E + S LA +F I + S++FG D
Sbjct: 1 MFIQTEDTPNPDAIKFFPGQEISSDQPVFFSELAEVKGRSKLAESLFHINNVKSIFFGSD 60
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + +W+ ++P VL +IM+HF++G P+ D ++ IE +
Sbjct: 61 FITVTKQAEGNWQIIKPEVLMIIMDHFVAGFPVFEESTKADTVNHNIDGFSEIEKQIIEI 120
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
RVRP+VA+DGGDI++KG+ +G+V L++RGAC GCPS++ TLK G+ ++L H
Sbjct: 121 IE------TRVRPSVAQDGGDIIYKGFENGVVKLALRGACRGCPSSTITLKNGIESMLKH 174
Query: 179 F 179
F
Sbjct: 175 F 175
>gi|154339123|ref|XP_001562253.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134062836|emb|CAM39281.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 282
Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats.
Identities = 61/192 (31%), Positives = 104/192 (54%), Gaps = 4/192 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--VEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ ++T +TPNP L+F E ++ + A SPLA +F + G+ +++
Sbjct: 64 LVVETNETPNPDCLRFFSMDFSFLKPEFSMDIPSPAHAYKSPLAEALFGVAGVQAIFLAD 123
Query: 59 DFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+++TV KD Q DW L + +I+E S + ++ G ++ + + E D V
Sbjct: 124 EYVTVRKDPQADWGALVHIIKEVIVEFAESKENVLSEAGEAEL-MGYNDDTEPNEDDDEV 182
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +KE+L R+RP + DGG++ F +G VFL + GAC CPS+ TLK G+ +L
Sbjct: 183 VLAVKELLATRIRPMLRADGGNVRFIDMDEGTVFLLLEGACKSCPSSHITLKSGIERMLM 242
Query: 178 HFVPEVKDIRTV 189
H++PEV +++ V
Sbjct: 243 HWIPEVVEVQEV 254
>gi|297182169|gb|ADI18341.1| thioredoxin-like proteins and domains [uncultured Rhodobacterales
bacterium HF4000_03E16]
Length = 146
Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats.
Identities = 79/151 (52%), Positives = 103/151 (68%), Gaps = 6/151 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPATLKF+PGQ VL G F +A+ A SPLA R+F++ G+ V+FG+DF
Sbjct: 1 MFIQTESTPNPATLKFLPGQTVLEMGTADFPSAEGASASPLAERLFAVNGVEGVFFGHDF 60
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K + DW+HL+P +LG IMEHF SG P++ G G + D +V
Sbjct: 61 VTVTKAEAMDWDHLKPSLLGAIMEHFQSGAPVMAGDAAG-----PSGHAEHSGEDGEIVS 115
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIV 150
+IKE+LD+RVRPAVA+DGGDI F G+ G+V
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFERGVV 146
>gi|255038627|ref|YP_003089248.1| nitrogen-fixing NifU domain-containing protein [Dyadobacter
fermentans DSM 18053]
gi|254951383|gb|ACT96083.1| nitrogen-fixing NifU domain protein [Dyadobacter fermentans DSM
18053]
Length = 198
Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats.
Identities = 66/196 (33%), Positives = 106/196 (54%), Gaps = 14/196 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEA----EISPLASRIFSIPGIASVY 55
+F+ TE +PNP ++KF+ ++ +G + + + + A + SPLA+ +F P + V+
Sbjct: 6 VFVYTELSPNPNSMKFVLNFELVPDGLSFDYPSLEAALEEGKASPLAADLFQFPHVKRVF 65
Query: 56 FGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD 114
+FIT+ K D WE + I +F P+ + K D + D
Sbjct: 66 IASNFITITKGDDIAWEEVLRDTKQFIKIYFEENHPVF------EQKTIDTNTLIVDARD 119
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG--IVFLSMRGACSGCPSASETLKYGV 172
S VQ+IK LD VRPAV DGG I F + +G +V + ++G+CSGCPS++ TLK G+
Sbjct: 120 SDTVQKIKAALDQYVRPAVESDGGAINFHSFDEGSGVVKVLLQGSCSGCPSSTLTLKAGI 179
Query: 173 ANILNHFVPEVKDIRT 188
N+L VP+VK++
Sbjct: 180 ENLLTRMVPDVKEVVA 195
>gi|327402876|ref|YP_004343714.1| nitrogen-fixing NifU domain-containing protein [Fluviicola
taffensis DSM 16823]
gi|327318384|gb|AEA42876.1| nitrogen-fixing NifU domain-containing protein [Fluviicola
taffensis DSM 16823]
Length = 201
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 64/191 (33%), Positives = 104/191 (54%), Gaps = 5/191 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEI-SPLASRIFSIPGIASVYFGYDF 60
+ E TPNP T+KF+ + +L+ G ++ F + EA+ SPLA +F+ P + +V+ +F
Sbjct: 8 VYVEMTPNPNTMKFVANKYLLINGESVEFHSGSEAKGYSPLAEELFNFPFVKTVFITANF 67
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV- 118
+TV K D W+ + + I + G I+ + K + +
Sbjct: 68 VTVAKNDSISWDFVTMELREFIKSWIVDGKDILIQMPVAKPKAASGDDSKPAKEYAPSEY 127
Query: 119 -QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
I+ +LD VRPAV DGG I F G+ +G V +++RGACSGCPS++ TLK G+ N+L
Sbjct: 128 DDAIRSLLDEYVRPAVEGDGGAIDFVGFEEGTVTVALRGACSGCPSSTATLKGGIENLLK 187
Query: 178 HFVPEVKDIRT 188
+P+VK++
Sbjct: 188 QHLPDVKEVVA 198
>gi|332291487|ref|YP_004430096.1| nitrogen-fixing NifU domain protein [Krokinobacter diaphorus
4H-3-7-5]
gi|332169573|gb|AEE18828.1| nitrogen-fixing NifU domain protein [Krokinobacter diaphorus
4H-3-7-5]
Length = 300
Score = 201 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 58/191 (30%), Positives = 103/191 (53%), Gaps = 5/191 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNP+TLKF+ + LV A F + + +P+A +F +P + V+F ++I+
Sbjct: 109 VYAESTPNPSTLKFVANKK-LVTTAFEFKSIDDTANAPMAKALFHLPYVKEVFFDENYIS 167
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K D +W+ + I ++ G I+ L + + + + E+ + + I
Sbjct: 168 VQKYDVAEWDEVVTETREFIRDYIQDGKEIVTAAQLKTPQQAEAIAEEKFETLDDISKEI 227
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANILNHF 179
+++ V+PAVA DGG+I+FK Y V + ++GACSGCPS++ TLK G+ N+L
Sbjct: 228 VNIIEEYVKPAVASDGGNIMFKNYDPKTQNVSVILQGACSGCPSSTFTLKNGIENMLKQM 287
Query: 180 VPE-VKDIRTV 189
+P + + +
Sbjct: 288 LPGKINMVEAI 298
Score = 77.1 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E T NPA KF Q ++ + F N EA SPLA ++F +P + +VY +F+
Sbjct: 6 ISVEGTSNPAIKKFQADQFLVNHNSYEFKNIDEAANSPLAQQLFYLPFVKTVYITQNFVA 65
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHF-ISGDPIIHNGGLGDMKLDDMGSGDFIES 113
+ K +W ++ V I ++ +G II + + + S
Sbjct: 66 IEKYNIVEWIDVQQEVANQIEDYLNDNGLVIIEDVAAKKIPVTVYAESTPNPS 118
>gi|146418001|ref|XP_001484967.1| hypothetical protein PGUG_02696 [Meyerozyma guilliermondii ATCC
6260]
Length = 244
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 68/192 (35%), Positives = 114/192 (59%), Gaps = 9/192 (4%)
Query: 4 QTEDTPNPATLKFI-PGQVV-LVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
QT TPN LKF+ P ++V + F+++ +A SPLA ++F +PG+ SV G DF+
Sbjct: 23 QTLSTPNENALKFVSPTKIVPMENKTFEFTSSLQAVHSPLALKLFKLPGVRSVMLGPDFL 82
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFISG-DPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
TV K D +W HLRP VL ++ + +P+I + + + + +V
Sbjct: 83 TVNKQDHVNWAHLRPEVLSLLDKFLTEKQEPVITKELIEATEKEAAEADADD---LEIVS 139
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+++ R+RPA+ DGGDI +K + + G VFL ++GAC C ++ +TLK+G+ ++L
Sbjct: 140 MIKELIETRIRPAIQDDGGDIEYKAFDEETGTVFLKLQGACKSCSASEDTLKHGIESMLK 199
Query: 178 HFVPEVKDIRTV 189
H+V EV+++ +
Sbjct: 200 HYVEEVQEVEQI 211
>gi|86130774|ref|ZP_01049373.1| NifU-like protein [Dokdonia donghaensis MED134]
gi|85818185|gb|EAQ39345.1| NifU-like protein [Dokdonia donghaensis MED134]
Length = 300
Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats.
Identities = 59/191 (30%), Positives = 103/191 (53%), Gaps = 5/191 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNP+T+KF+ + LV + F + + +P+A +F P + V+F ++I+
Sbjct: 109 VYAESTPNPSTIKFVANKK-LVTTSFEFKSIDDTANAPMAKALFHFPFVKEVFFDENYIS 167
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K D +W+ + I ++ G I+ L + D + + E+ V + I
Sbjct: 168 VQKYDMAEWDEVVTETREFIRDYIQDGKEIVTAEQLKTPQQVDAIAEEKFETLDDVSKEI 227
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANILNHF 179
+++ V+PAVA DGG+IVFK Y + V + ++GACSGCPS++ TLK G+ N+L
Sbjct: 228 VNIIEEYVKPAVASDGGNIVFKHYDEKTQNVSVILQGACSGCPSSTFTLKNGIENMLKQM 287
Query: 180 VPE-VKDIRTV 189
+P + + +
Sbjct: 288 LPGKINMVEAI 298
Score = 74.4 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E T NPA KF Q ++ + F N EA SPLA ++F +P + +VY +F+
Sbjct: 6 ISVEGTSNPAIKKFQADQFLVNHNSYEFKNIDEAANSPLAQQLFYLPFVKTVYIAQNFVA 65
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHF-ISGDPIIHNGGLGDMKLDDMGSGDFIES 113
+ K +W ++ V + ++ +G II + + + S
Sbjct: 66 IEKYNIVEWIDVQQEVANQVEDYLNDNGLVIIEDVAAKKIPVTVYAESTPNPS 118
>gi|163753913|ref|ZP_02161036.1| thioredoxin-related protein [Kordia algicida OT-1]
gi|161326127|gb|EDP97453.1| thioredoxin-related protein [Kordia algicida OT-1]
Length = 301
Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats.
Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 5/191 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E TPNP +KF+ + ++ + F N E + +PLA +F P + ++ ++I+
Sbjct: 110 IYAESTPNPTVMKFVANKKIV-DRIFEFKNIDETKYAPLAQSLFHFPFVKEIFLDKNYIS 168
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
+ K D +W + + I + G +I + K S + E + + I
Sbjct: 169 ITKYDMVEWNDITMEIREFIRNYIQEGREVISKDIPVEQKEKIQISDESFEELDDISKEI 228
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDG--IVFLSMRGACSGCPSASETLKYGVANILNHF 179
+L+ ++PAVA DGG+I+F Y IV + ++GACSGCPS++ TLK G+ N L +
Sbjct: 229 VNILEEYIKPAVASDGGNIMFDSYDPNSKIVKVVLQGACSGCPSSTMTLKSGIENTLKNL 288
Query: 180 V-PEVKDIRTV 189
+ +V ++ +
Sbjct: 289 LKGQVSEVVAI 299
Score = 79.5 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 12/147 (8%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+ I E T NPA +KF + + F N EA+ SPLA ++F +P + +++ +F
Sbjct: 4 ITISIEKTSNPAIIKFEASTFLSRHNSYEFKNIDEAKDSPLAQQLFYLPFVKTIFISGNF 63
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES------ 113
I + + WE ++ V I + G +I + + +
Sbjct: 64 IAIERYNIVTWEDVQDEVAEQIQNYINEGKEVISESASPKKVVPVTIYAESTPNPTVMKF 123
Query: 114 --DSAVVQRI---KEVLDNRVRPAVAR 135
+ +V RI K + + + P
Sbjct: 124 VANKKIVDRIFEFKNIDETKYAPLAQS 150
>gi|190346499|gb|EDK38598.2| hypothetical protein PGUG_02696 [Meyerozyma guilliermondii ATCC
6260]
Length = 244
Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats.
Identities = 68/192 (35%), Positives = 114/192 (59%), Gaps = 9/192 (4%)
Query: 4 QTEDTPNPATLKFI-PGQVV-LVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
QT TPN LKF+ P ++V + F+++ +A SPLA ++F +PG+ SV G DF+
Sbjct: 23 QTLSTPNENALKFVSPTKIVPMENKTFEFTSSLQAVHSPLALKLFKLPGVRSVMLGPDFL 82
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFISG-DPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
TV K D +W HLRP V ++ + +P+I + + + + S +V
Sbjct: 83 TVNKQDHVNWAHLRPEVSSLLDKFLTEKQEPVITKELIEATEKEAAEADADD---SEIVS 139
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+++ R+RPA+ DGGDI +K + + G VFL ++GAC C ++ +TLK+G+ ++L
Sbjct: 140 MIKELIETRIRPAIQDDGGDIEYKAFDEETGTVFLKLQGACKSCSASEDTLKHGIESMLK 199
Query: 178 HFVPEVKDIRTV 189
H+V EV+++ +
Sbjct: 200 HYVEEVQEVEQI 211
>gi|325286802|ref|YP_004262592.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga lytica
DSM 7489]
gi|324322256|gb|ADY29721.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga lytica
DSM 7489]
Length = 300
Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats.
Identities = 56/190 (29%), Positives = 105/190 (55%), Gaps = 5/190 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E+TPNPA ++F+ ++++ F N +EA+ S LA+ +F P + V+ ++I+
Sbjct: 109 VYAENTPNPAAMRFVANKLIVP-TIFEFKNKEEAKDSDLATTLFQFPYVKEVFLDENYIS 167
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K D+ DW + + I G ++ + K + + E+ ++I
Sbjct: 168 VTKTDEADWNEITLELRESIQAFLTEGKEVVSANSISKQKQEAPATQLQDENLDDTSKQI 227
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANILNHF 179
++L+ V+PAVA DGG+I+FK Y + V + ++GACSGCPS++ TLK G+ N+L +
Sbjct: 228 IDILEEYVKPAVASDGGNIMFKSYDENTKKVNVILQGACSGCPSSTFTLKNGIENMLKNM 287
Query: 180 VPE-VKDIRT 188
+ + + ++
Sbjct: 288 MGDKIGEVVA 297
Score = 80.2 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+ I T T NPA LKF + + + N EA+ SPLA ++F +P I +VY +F
Sbjct: 6 ITIYT--TTNPAILKFETNHFITKNNSYEYKNIDEAKNSPLAQQLFYLPFIKTVYISGNF 63
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD 109
I + + D W+ +R V ++++ SG+ ++H + + +
Sbjct: 64 IALERFDIVAWDDVRDEVAQQLVDYLNSGEVVVHEQEDPQSVPATVYAEN 113
>gi|221103919|ref|XP_002156303.1| PREDICTED: similar to GK25604 [Hydra magnipapillata]
Length = 192
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 65/195 (33%), Positives = 104/195 (53%), Gaps = 14/195 (7%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNA----KEAEISPLASRIFSIPGIASVYF 56
I TE +PNP ++KF+ + EG + + +E++ SPLA +F P + ++
Sbjct: 1 MIYTELSPNPNSMKFVLNFELAPEGLTFDYPSLASTVEESKASPLAGDLFQFPFVRRIFI 60
Query: 57 GYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDS 115
+FIT+ KD + +WE + + + F +P+ K D + +DS
Sbjct: 61 ASNFITITKDDETEWEDIVYDIKKFMKIFFEQNNPVFA------QKTIDKNTLIVDANDS 114
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVA 173
AV+ +IK LD VRPAV DGG I F + + G V + ++G+CSGCPS++ TLK G+
Sbjct: 115 AVIAKIKSTLDQYVRPAVESDGGAINFASFDEISGQVKVYLQGSCSGCPSSTVTLKDGIE 174
Query: 174 NILNHFVPEVKDIRT 188
+L VPEVK++
Sbjct: 175 RLLKTMVPEVKEVVA 189
>gi|312885490|ref|ZP_07745129.1| Scaffold protein Nfu/NifU [Mucilaginibacter paludis DSM 18603]
gi|311302070|gb|EFQ79100.1| Scaffold protein Nfu/NifU [Mucilaginibacter paludis DSM 18603]
Length = 182
Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 109/187 (58%), Gaps = 13/187 (6%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ TE TPNPAT+KFI + +L+ G++ ++ + AE SP A +F + V+F +F+T
Sbjct: 5 VYTESTPNPATMKFIVNK-LLINGSVDYATRESAEKSPFAKELFKFSFVNGVFFASNFVT 63
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K + DW L P + + S + ++ + F +D+ + +I
Sbjct: 64 VTKTEGSDWNDLEPILKEFVKGAVESELLV---------QIKEQEEVAFEGTDAEI--KI 112
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
+++L + VRPAV +DGG I +K + +G+V + +RG+CSGCPS++ TLK G+ N+L VP
Sbjct: 113 QQILQDYVRPAVEQDGGAITYKSFNEGVVTVELRGSCSGCPSSTITLKSGIENLLKRMVP 172
Query: 182 EVKDIRT 188
EV ++ +
Sbjct: 173 EVTEVVS 179
>gi|326801010|ref|YP_004318829.1| Scaffold protein Nfu/NifU [Sphingobacterium sp. 21]
gi|326551774|gb|ADZ80159.1| Scaffold protein Nfu/NifU [Sphingobacterium sp. 21]
Length = 184
Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 112/187 (59%), Gaps = 12/187 (6%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ TE TPNPAT+KF+ + +L G++ F + ++A+ SP A +F + V+F +F+T
Sbjct: 6 VYTESTPNPATMKFLVNK-LLYNGSLDFPDKEKAQSSPFARELFKFNFVNGVFFASNFVT 64
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
+ K + +WE + P + + S + +++ D+ + + E++ ++I
Sbjct: 65 ITKSEDSEWEDILPILKDFVKGAVES------ELLIHEVERDENVAFEGSETE----KKI 114
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
++VL + VRPAV +DGG I +K + +G+V + +RG+CSGCPS++ TLK G+ +L VP
Sbjct: 115 QQVLHDYVRPAVEQDGGAIAYKSFDEGVVTVELRGSCSGCPSSTITLKAGIEGLLKRMVP 174
Query: 182 EVKDIRT 188
EV+++
Sbjct: 175 EVQEVVA 181
>gi|320581036|gb|EFW95258.1| hypothetical protein HPODL_3630 [Pichia angusta DL-1]
Length = 242
Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats.
Identities = 69/201 (34%), Positives = 107/201 (53%), Gaps = 12/201 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQ----VVLVEGAIHFSNAKEAEI-SPLASRIFSIPG--IAS 53
+FIQT+ TPN LKF+P + + + K+A S LA ++ S+ I S
Sbjct: 20 LFIQTQSTPNENALKFVPSEFKFLPSPNTPTLEITGIKDALNKSELAFKLLSVNDKSIKS 79
Query: 54 VYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLG--DMKLDDMGSGDF 110
+ FGY+FITV K + + W L+P + ++ EH SG +I+ + + + D
Sbjct: 80 ILFGYNFITVIKGEKHSWSLLKPEIFSILTEHLTSGQAVINQKYINILGQQSAENEDLDG 139
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETL 168
E + VV I E+L R++PA+ DGGDI F + + G VFL + GAC C S+ TL
Sbjct: 140 YEDEDEVVALINELLITRIQPAIQEDGGDIKFVRFDEDTGTVFLKLIGACKSCSSSEITL 199
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ +L ++ EVK ++ V
Sbjct: 200 KNGIEEMLKFYIDEVKSVQQV 220
>gi|300175875|emb|CBK21871.2| Scaffold protein Isu1 [Blastocystis hominis]
Length = 271
Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 11/194 (5%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVE---GAIHFSNAKEAEISPLASRIFSIPGIASVY 55
+F+Q ++TPNP KF+P VL + F+ KEA SPLAS++F IP + SV
Sbjct: 28 LFVQIKETPNPDVQKFLPTPSISVLPSEFGHTMEFNTTKEARASPLASKLFDIPEVKSVL 87
Query: 56 FGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD 114
G D+I V + +WE+L P + I++ F S D H + + ++D
Sbjct: 88 LGNDYICVTRQKGVEWEYLNPAIFHTILDFFSSPD---HEAVVLKPDEIPEDPNEIKDTD 144
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGV 172
S VV+ IKE+LD R+RP + DGGDI F + + G + + M GAC GC S+S TLK GV
Sbjct: 145 SEVVRLIKELLDTRIRPRIKADGGDIFFHTFDESSGELLVRMTGACKGCASSSVTLKQGV 204
Query: 173 ANILNHFVPEVKDI 186
++ H++PEV +
Sbjct: 205 EQMMKHYIPEVVTV 218
>gi|255532822|ref|YP_003093194.1| nitrogen-fixing NifU domain-containing protein [Pedobacter
heparinus DSM 2366]
gi|255345806|gb|ACU05132.1| nitrogen-fixing NifU domain protein [Pedobacter heparinus DSM 2366]
Length = 183
Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats.
Identities = 65/187 (34%), Positives = 106/187 (56%), Gaps = 12/187 (6%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ TE TPNPAT+KF+ + +L+ G+ F+ + AE SP A +F + V+F +F+T
Sbjct: 5 VYTEQTPNPATMKFMVNK-LLINGSEDFATKESAEHSPFAKELFKFSFVNGVFFASNFVT 63
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K + +W + P + + S I +D + S + +I
Sbjct: 64 VTKTEDAEWADIEPILKEFVKGAVESEYKI----------KEDTSAEAPAFEGSDLEIKI 113
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
+++L + VRPAV +DGG I +K + DG+V + +RG+CSGCPS++ TLK G+ N+L VP
Sbjct: 114 QQILHDYVRPAVEQDGGAISYKSFDDGVVTVELRGSCSGCPSSTITLKSGIQNLLQRMVP 173
Query: 182 EVKDIRT 188
EVK++ +
Sbjct: 174 EVKEVVS 180
>gi|42523787|ref|NP_969167.1| nifU related protein [Bdellovibrio bacteriovorus HD100]
gi|39575994|emb|CAE80160.1| nifU related protein [Bdellovibrio bacteriovorus HD100]
Length = 186
Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats.
Identities = 78/185 (42%), Positives = 114/185 (61%), Gaps = 11/185 (5%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
E TPNPAT+KF+ + V +G +EAE SPLA++IF P +SVY G DFITV K
Sbjct: 12 EPTPNPATMKFLLHKKVTDQG-FDCPTVQEAERSPLAAKIFGFPWTSSVYVGPDFITVTK 70
Query: 66 -DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEV 124
D DWE L P+ G+I EH +P++ + + + + E+DS +V+ IK V
Sbjct: 71 QDWVDWELLAHPLSGLIQEHLDRDEPVV---------VTFVEAEEDNENDSPMVRNIKSV 121
Query: 125 LDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVK 184
L+ +RP VA DGGDIVF Y + ++++ M+GACSGCPS++ TLK G+ + PE+
Sbjct: 122 LNREIRPVVALDGGDIVFHKYENNVLYIHMKGACSGCPSSTVTLKEGIEVRMKELFPEIV 181
Query: 185 DIRTV 189
++ +V
Sbjct: 182 EVVSV 186
>gi|304320546|ref|YP_003854189.1| NifU-like domain protein [Parvularcula bermudensis HTCC2503]
gi|303299448|gb|ADM09047.1| NifU-like domain protein [Parvularcula bermudensis HTCC2503]
Length = 163
Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats.
Identities = 76/165 (46%), Positives = 108/165 (65%), Gaps = 6/165 (3%)
Query: 28 IHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFI 86
+ F + A++SPLAS +F I G+ VY G DF+TV KD +W+HL+P VLG + ++
Sbjct: 1 MDFPTLESAKVSPLASALFDIDGVVEVYLGADFLTVTKDPSVEWQHLKPAVLGTVADYLA 60
Query: 87 SGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR 146
+G P++ G D D+ +V++I ++++ RVRPAVA+DGGDIVF +
Sbjct: 61 AGIPVVDQGAAADS---ADTPDDYEGETKEIVEQIIDLIETRVRPAVAQDGGDIVFHRFV 117
Query: 147 --DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
DGIVFLSMRGACSGCPS++ TLK G+ N+L H+VPEV + V
Sbjct: 118 PGDGIVFLSMRGACSGCPSSTMTLKSGIENLLKHYVPEVTAVEAV 162
>gi|124006329|ref|ZP_01691163.1| NifU domain protein [Microscilla marina ATCC 23134]
gi|123987986|gb|EAY27657.1| NifU domain protein [Microscilla marina ATCC 23134]
Length = 197
Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 103/190 (54%), Gaps = 10/190 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGA-IHFSNAKEAEISPLASRIF-SIPGIASVYFGYDF 60
I TE PNP +LK++ +++ +G F +A+ A+ SPLA+ +F + V+ +F
Sbjct: 11 IYTESNPNPNSLKYVINYMLVPDGTTFDFPDAETAQQSPLATELFSKFSYVDRVFMMSNF 70
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K ++ DW + V + + P++ + D + + + + +
Sbjct: 71 VTVTKKEEADWHDVAGEVKEFLQGYLEEQKPLLT------QDIQDEYDKELNKDEPEIDR 124
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+IK +L+ VRPAV DGG I F Y +G V + ++G+CSGCPS+ TLK G+ N+L
Sbjct: 125 KIKGILEEYVRPAVESDGGAINFHSYENGTVKVLLQGSCSGCPSSMVTLKSGIENLLKRM 184
Query: 180 VPE-VKDIRT 188
+PE VK++
Sbjct: 185 LPEDVKEVVA 194
>gi|332519966|ref|ZP_08396430.1| nitrogen-fixing NifU domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332044525|gb|EGI80719.1| nitrogen-fixing NifU domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 300
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 5/191 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNP+ +KF+ + + A F +A+ SPLA+ +F +P + SV+ ++++
Sbjct: 109 VYAESTPNPSVIKFVANKKI-ANAAYEFVTIDDAKPSPLATELFHLPFVKSVFIDENYVS 167
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K D +W+ + + I + G II ++ E+ + I
Sbjct: 168 VTKYDVAEWQEITNELREFIRSYIEDGKEIISANAPEAIEKSTKNVDAHFETLDDTSKEI 227
Query: 122 KEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+L+ V+PAVA DGG+I F+ Y V + ++GACSGCPS++ TLK G+ N+L
Sbjct: 228 VNILEEYVKPAVASDGGNIQFESYNADTKTVKVILQGACSGCPSSTFTLKNGIENMLKEM 287
Query: 180 VPE-VKDIRTV 189
+ V + +
Sbjct: 288 LKGKVNTVEAI 298
Score = 71.0 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ ++T N + +KF Q + + F+N EA+ SPLA +F +P + VY +FI
Sbjct: 6 VTIQETSNNSIIKFELNQFITQHQSFEFNNIDEAKESPLAQELFYLPFVKKVYITSNFIA 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD 99
+ + + +W+ ++ V I + G +I
Sbjct: 66 IERFNIVEWKDVQDEVSEQIKAYLNKGGIVITENATSK 103
>gi|312129640|ref|YP_003996980.1| nitrogeN-fixing nifu domain protein [Leadbetterella byssophila DSM
17132]
gi|311906186|gb|ADQ16627.1| nitrogen-fixing NifU domain protein [Leadbetterella byssophila DSM
17132]
Length = 199
Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 99/195 (50%), Gaps = 14/195 (7%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNA----KEAEISPLASRIFSIPGIASVYF 56
I TE +PNP ++KF+ ++ EG + + E + SPLAS +F + V+
Sbjct: 7 MIYTELSPNPNSMKFVLNYEIVPEGLSFDYPTKASTFDEKKASPLASDLFLFDFVERVFI 66
Query: 57 GYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDS 115
+FIT+ K DW+ + V I +F P+ K D + SDS
Sbjct: 67 SSNFITLTKRGDIDWDDVLGDVRQFIKTYFDENHPVFA------QKTIDSHTLIVQGSDS 120
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVA 173
VV +IK LD VRPAV DGG I F + + G V + ++G+CSGCPSAS TLK G+
Sbjct: 121 EVVAKIKSTLDQYVRPAVESDGGAINFSSFEEESGTVKVLLQGSCSGCPSASLTLKAGIE 180
Query: 174 NILNHFVPEVKDIRT 188
+L +PEVK +
Sbjct: 181 RLLTTMIPEVKSVEA 195
>gi|294659524|ref|XP_461916.2| DEHA2G08492p [Debaryomyces hansenii CBS767]
gi|199434030|emb|CAG90379.2| DEHA2G08492p [Debaryomyces hansenii]
Length = 240
Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 68/192 (35%), Positives = 108/192 (56%), Gaps = 9/192 (4%)
Query: 4 QTEDTPNPATLKFI-PGQVVLV--EGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+T +TPNP LKFI P +L F++ +A SPLA ++F + G+ S+ G DF
Sbjct: 21 KTLETPNPNALKFISPECQILPIPSKTFEFTSTLQAIHSPLALKLFKLHGVRSIMLGEDF 80
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D +W LRP V+ ++ S + L + + E DS +V
Sbjct: 81 LTVNKQDHINWAQLRPEVVDLLDGFLTSKKESVVTKELIEESE---REIESSEDDSEIVS 137
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+++ R+RPA+ DGGDI FKG+ + G VFL ++GAC C S+ +TLK G+ ++
Sbjct: 138 MIKELIETRIRPAIQDDGGDIEFKGFDEETGNVFLKLQGACKTCSSSEDTLKNGIEQMMK 197
Query: 178 HFVPEVKDIRTV 189
H++ V+++ +
Sbjct: 198 HYIDGVQEVIQI 209
>gi|195559882|ref|XP_002077376.1| GD12677 [Drosophila simulans]
gi|194202482|gb|EDX16058.1| GD12677 [Drosophila simulans]
Length = 175
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 62/149 (41%), Positives = 90/149 (60%), Gaps = 8/149 (5%)
Query: 42 ASRIFSIPGIASVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDM 100
A +F + G+ V+FG DFIT+ K + +W ++P V +IM+ F SG P++++
Sbjct: 1 AKLLFRVEGVKGVFFGSDFITISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPN-- 58
Query: 101 KLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSG 160
+ +E D V IKE+LD R+RP V DGGDIVF GY G+V L M+G+CS
Sbjct: 59 -----ADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSS 113
Query: 161 CPSASETLKYGVANILNHFVPEVKDIRTV 189
CPS+ TLK GV N+L ++PEV+ + V
Sbjct: 114 CPSSIVTLKNGVQNMLQFYIPEVESVEQV 142
>gi|322499834|emb|CBZ34907.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 284
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 4/192 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--VEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ ++T +TPNP ++F V E ++ + +A SPLA +F + G+ +V+
Sbjct: 66 IVVETNETPNPDCMRFFSMDVSFLKPEFSMDIPSPAQAYKSPLAEALFGVAGVQAVFLAD 125
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+++TV K Q DW L P + +I+E S + ++ G ++ L + + D V
Sbjct: 126 EYVTVRKHPQADWAALIPIIKEVIVEFAESKENVLSAAGEEEL-LGYNNDTEPDDDDDEV 184
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +KE+L R+RP + DGG++ F +G VFL + G+C CPS+ TLK G+ +L
Sbjct: 185 VLAVKELLATRIRPMLRADGGNVRFIDMDEGTVFLLLEGSCKSCPSSHVTLKSGIERMLM 244
Query: 178 HFVPEVKDIRTV 189
H++PEV + + V
Sbjct: 245 HWIPEVVEAQEV 256
>gi|86140721|ref|ZP_01059280.1| NifU-like domain protein [Leeuwenhoekiella blandensis MED217]
gi|85832663|gb|EAQ51112.1| NifU-like domain protein [Leeuwenhoekiella blandensis MED217]
Length = 301
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 58/191 (30%), Positives = 99/191 (51%), Gaps = 5/191 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNPA LKF+ + ++ E + F N EA+ +PLA +F P + V+ ++++
Sbjct: 110 VYAESTPNPAVLKFVTNKKIVTE-TLEFKNIDEAKNAPLALALFHFPFVKEVFMDSNYVS 168
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K D +W+ + V I + G II + + E+ + I
Sbjct: 169 VQKYDVAEWDDVFQEVREFIKTYIEEGKEIISENFKKTPQAVEEQKEVEFEAMDDTSKEI 228
Query: 122 KEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+++ V+PAVA DGG+I+FK Y V + ++GACSGCPS++ TLK G+ N+L
Sbjct: 229 ANIIEEYVKPAVASDGGNILFKHYDPESKNVKVILQGACSGCPSSTFTLKNGIENMLKEM 288
Query: 180 V-PEVKDIRTV 189
+ ++ + +
Sbjct: 289 LRGKINSVEAI 299
Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E T NPA KF ++ + F N EA+ SPLA ++F +P + +VY +FI
Sbjct: 6 ITIEPTSNPAIKKFQANSFLVDHNSYEFKNIDEAKNSPLAQQLFYLPFVKTVYISQNFIA 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+ K + +W ++ + I +I K+ + + + +
Sbjct: 66 IEKFNIVEWIDIQDELSAQIENFLNDNGVVIIEDATSVKKVPVTVYAESTPNPAVL 121
>gi|91216703|ref|ZP_01253668.1| nifU related protein [Psychroflexus torquis ATCC 700755]
gi|91185172|gb|EAS71550.1| nifU related protein [Psychroflexus torquis ATCC 700755]
Length = 302
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 58/190 (30%), Positives = 107/190 (56%), Gaps = 6/190 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNP+ +KF+ + +++E + F + +AE+SPLA ++F P + ++ ++I+
Sbjct: 111 VYAESTPNPSVMKFVANKKLVLE-SAEFKSIDDAELSPLAQKLFHFPFVKEIFMDDNYIS 169
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
+ K D +WE + + G I ++ G I+ +G + K + + + + I
Sbjct: 170 INKYDMAEWEEITNELRGFIKDYLEEGGKILESGKVQSKKTEAPSPEIDTSNLDDISKEI 229
Query: 122 KEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
++L+ V+PAVA DGG+I+FK Y V + ++GACSGCPS++ TLK G+ ++L
Sbjct: 230 VQILEEYVKPAVASDGGNIMFKSYNAESKDVQVILQGACSGCPSSTITLKNGIESMLKEM 289
Query: 180 VPEVKDIRTV 189
+ + TV
Sbjct: 290 LQG--KVETV 297
Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ + T P+ LKF + + + + N +EA SP+AS++F +P + +VY +FI
Sbjct: 6 VEIKPTNKPSILKFEFNEFLTKQKGYEYHNIEEAMKSPIASQLFYLPFVKTVYISQNFIA 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD 99
+ K + +W ++ + +++H G I+
Sbjct: 66 IEKFNIVEWADVQNEISEQLLKHMNDGGKIVDEKEENS 103
>gi|4790|emb|CAA49299.1| YKL253 [Saccharomyces cerevisiae]
Length = 230
Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats.
Identities = 66/206 (32%), Positives = 112/206 (54%), Gaps = 17/206 (8%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEGAIHF--SNAKE--AEISPLASRIF-SIPGIAS 53
+ I+T TPN LKF+ G+++ G+ N E S LA +IF PG+ S
Sbjct: 22 IHIKTLTTPNENALKFLSTDGEMLQTRGSKSIVIKNTDENLINHSKLAQQIFLQCPGVES 81
Query: 54 VYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD-------DM 105
+ G DF+T+ KD W ++P ++ ++ + G+ +I + + +M
Sbjct: 82 LMIGDDFLTINKDRMVHWNSIKPEIIDLLTKQLAYGEDVISKEFHAVQEEEGEGGYKINM 141
Query: 106 GSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPS 163
+ E D V + I+E++D R+RPA+ DGGDI ++G+ G V+L ++GAC+ C S
Sbjct: 142 PKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCSS 201
Query: 164 ASETLKYGVANILNHFVPEVKDIRTV 189
+ TLKYG+ ++L H+V EVK++ +
Sbjct: 202 SEVTLKYGIESMLKHYVDEVKEVIQI 227
>gi|151941505|gb|EDN59868.1| nifu-like protein [Saccharomyces cerevisiae YJM789]
Length = 256
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 66/206 (32%), Positives = 112/206 (54%), Gaps = 17/206 (8%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEGAIHF--SNAKE--AEISPLASRIF-SIPGIAS 53
+ I+T TPN LKF+ G+++ G+ N E S LA +IF PG+ S
Sbjct: 22 IHIKTLTTPNENALKFLSTDGEMLQTRGSKSIVIKNTDENLINHSKLAQQIFLQCPGVES 81
Query: 54 VYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD-------DM 105
+ G DF+T+ KD W ++P ++ ++ + G+ +I + + +M
Sbjct: 82 LMIGDDFLTINKDRMVHWNSIKPEIIDLLTKQLACGEDVISKEFHAVQEEEGEGGYKINM 141
Query: 106 GSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPS 163
+ E D V + I+E++D R+RPA+ DGGDI ++G+ G V+L ++GAC+ C S
Sbjct: 142 PKFELSEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCSS 201
Query: 164 ASETLKYGVANILNHFVPEVKDIRTV 189
+ TLKYG+ ++L H+V EVK++ +
Sbjct: 202 SEVTLKYGIESMLKHYVDEVKEVIQI 227
>gi|91205888|ref|YP_538243.1| NifU-like protein [Rickettsia bellii RML369-C]
gi|157826752|ref|YP_001495816.1| NifU-like protein [Rickettsia bellii OSU 85-389]
gi|91069432|gb|ABE05154.1| NifU-like protein [Rickettsia bellii RML369-C]
gi|157802056|gb|ABV78779.1| NifU-like protein [Rickettsia bellii OSU 85-389]
Length = 185
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 75/181 (41%), Positives = 113/181 (62%), Gaps = 11/181 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAE-ISPLASRIFSIPGIASVYFGYD 59
MFIQTEDTPNP +KF PGQ + + I FS E + S LA +F+I + S++FG D
Sbjct: 1 MFIQTEDTPNPDAIKFFPGQEISTQ-PIFFSERAEVKGKSKLAESLFNINNVKSIFFGSD 59
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
FITV K + DW+ ++P VL ++M+HF++G P+ D + S + +
Sbjct: 60 FITVTKKTESDWQVIKPEVLMVVMDHFVAGFPVFEVSSKVDDVNLEGFSDIEKQIIEIIE 119
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
R++ P+VA+DGGDI++KG+ +G+V L++RGAC GCPS++ TLK G+ ++L H
Sbjct: 120 TRVR--------PSVAQDGGDIIYKGFENGVVKLALRGACLGCPSSTITLKNGIESMLKH 171
Query: 179 F 179
F
Sbjct: 172 F 172
>gi|146089377|ref|XP_001470367.1| hypothetical protein [Leishmania infantum JPCM5]
gi|134070400|emb|CAM68738.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 284
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 61/192 (31%), Positives = 105/192 (54%), Gaps = 4/192 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--VEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ ++T +TPNP ++F V E ++ + +A SPLA +F + G+ +V+
Sbjct: 66 IVVETNETPNPDCMRFFSMDVSFLKPEFSMDIPSPAQAYKSPLAEALFGVAGVQAVFLAD 125
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+++TV K Q DW L P + +I+E S + ++ G ++ L + + D V
Sbjct: 126 EYVTVRKHPQADWAALIPIIKEVIVEFAESKENVLSAAGEEEL-LGYNNDTEPDDDDDEV 184
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +KE+L R+RP + DGG++ F +G VFL + G+C CPS+ TLK G+ +L
Sbjct: 185 VLAVKELLATRIRPMLRADGGNVRFIDMDEGTVFLLLEGSCKSCPSSHVTLKSGIERMLM 244
Query: 178 HFVPEVKDIRTV 189
H++PEV + + V
Sbjct: 245 HWIPEVVEAQEV 256
>gi|323347797|gb|EGA82061.1| Nfu1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 256
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 66/206 (32%), Positives = 112/206 (54%), Gaps = 17/206 (8%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEGAIHF--SNAKE--AEISPLASRIF-SIPGIAS 53
+ I+T TPN LKF+ G+++ G+ N E S LA +IF PG+ S
Sbjct: 22 IHIKTLTTPNENALKFLSTDGEMLQTRGSKSIVIKNTDENLINHSKLAQQIFLQCPGVES 81
Query: 54 VYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD-------DM 105
+ G DF+T+ KD W ++P ++ ++ + G+ +I + + +M
Sbjct: 82 LMIGDDFLTINKDRMVHWNSIKPEIIDLLTKQLAXGEDVISKEFHAVQEEEGEGGYKINM 141
Query: 106 GSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPS 163
+ E D V + I+E++D R+RPA+ DGGDI ++G+ G V+L ++GAC+ C S
Sbjct: 142 PKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCSS 201
Query: 164 ASETLKYGVANILNHFVPEVKDIRTV 189
+ TLKYG+ ++L H+V EVK++ +
Sbjct: 202 SEVTLKYGIESMLKHYVDEVKEVIQI 227
>gi|6322811|ref|NP_012884.1| Nfu1p [Saccharomyces cerevisiae S288c]
gi|549668|sp|P32860|NFU1_YEAST RecName: Full=NifU-like protein, mitochondrial; Flags: Precursor
gi|486050|emb|CAA81875.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45269699|gb|AAS56230.1| YKL040C [Saccharomyces cerevisiae]
gi|190409786|gb|EDV13051.1| hypothetical protein SCRG_03979 [Saccharomyces cerevisiae RM11-1a]
gi|207343478|gb|EDZ70927.1| YKL040Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272476|gb|EEU07457.1| Nfu1p [Saccharomyces cerevisiae JAY291]
gi|259147796|emb|CAY81046.1| Nfu1p [Saccharomyces cerevisiae EC1118]
gi|285813219|tpg|DAA09116.1| TPA: Nfu1p [Saccharomyces cerevisiae S288c]
Length = 256
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 66/206 (32%), Positives = 112/206 (54%), Gaps = 17/206 (8%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEGAIHF--SNAKE--AEISPLASRIF-SIPGIAS 53
+ I+T TPN LKF+ G+++ G+ N E S LA +IF PG+ S
Sbjct: 22 IHIKTLTTPNENALKFLSTDGEMLQTRGSKSIVIKNTDENLINHSKLAQQIFLQCPGVES 81
Query: 54 VYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD-------DM 105
+ G DF+T+ KD W ++P ++ ++ + G+ +I + + +M
Sbjct: 82 LMIGDDFLTINKDRMVHWNSIKPEIIDLLTKQLAYGEDVISKEFHAVQEEEGEGGYKINM 141
Query: 106 GSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPS 163
+ E D V + I+E++D R+RPA+ DGGDI ++G+ G V+L ++GAC+ C S
Sbjct: 142 PKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCSS 201
Query: 164 ASETLKYGVANILNHFVPEVKDIRTV 189
+ TLKYG+ ++L H+V EVK++ +
Sbjct: 202 SEVTLKYGIESMLKHYVDEVKEVIQI 227
>gi|261329222|emb|CBH12201.1| HIRA-interacting protein 5, putative [Trypanosoma brucei gambiense
DAL972]
Length = 280
Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats.
Identities = 71/192 (36%), Positives = 106/192 (55%), Gaps = 6/192 (3%)
Query: 2 FIQTE--DTPNPATLKFIPGQ-VVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFG 57
FI E +TPNP L+F + L G ++ +A+ A SPLA +FSI G+ SV+
Sbjct: 60 FIVVEKNETPNPDCLRFYSMELSFLPPGRSLDLPDAQHAGKSPLAELLFSISGVQSVFLA 119
Query: 58 YDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
++ITVGK DW L P + I+E SG I+ G +D+ D + D
Sbjct: 120 DEYITVGKVPHVDWGSLVPQIQECIVEFAESGVGILSEEGEACF-VDNNNDTDPEDDDDE 178
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
VV +KE+L R+RP + DGG++ + DG VF+ + GAC CPS+ TLK G+ +L
Sbjct: 179 VVLAVKELLSARIRPLLRADGGNVRYISMDDGTVFVLLEGACKSCPSSGVTLKNGIERML 238
Query: 177 NHFVPEVKDIRT 188
H++PEV +++
Sbjct: 239 MHWIPEVVEVQE 250
>gi|255713524|ref|XP_002553044.1| KLTH0D07458p [Lachancea thermotolerans]
gi|238934424|emb|CAR22606.1| KLTH0D07458p [Lachancea thermotolerans]
Length = 248
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 64/204 (31%), Positives = 113/204 (55%), Gaps = 15/204 (7%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEG--AIHFSNAKEA--EISPLASRIF-SIPGIAS 53
+ I++ TPN LKFI G+++ G ++ N E+ + SPLASR+F PG+ +
Sbjct: 21 LHIKSVSTPNENALKFISTDGELLQERGKPSVEIKNTDESLIKHSPLASRLFTQCPGVEA 80
Query: 54 VYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD-----DMGS 107
+ G DFITV KD+ W + P V+ ++ ++ SG + + ++
Sbjct: 81 LMIGDDFITVNKDEMVHWNQITPSVIDLLTQYLASGREAVTPEFFSVQEQGVGYDVNVPK 140
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSAS 165
++ E + + I E++ R+RPA+ DGGDI ++GY G V+L ++GAC C S+
Sbjct: 141 FEYNEDEQEISDMIDELIQTRIRPAIMDDGGDIQYRGYDPQTGTVYLKLQGACKSCSSSE 200
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TLK+G+ ++L H++ EV+++ +
Sbjct: 201 VTLKHGIESMLKHYIEEVENVVQI 224
>gi|323354104|gb|EGA85950.1| Nfu1p [Saccharomyces cerevisiae VL3]
Length = 249
Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats.
Identities = 66/206 (32%), Positives = 112/206 (54%), Gaps = 17/206 (8%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEGAIHF--SNAKE--AEISPLASRIF-SIPGIAS 53
+ I+T TPN LKF+ G+++ G+ N E S LA +IF PG+ S
Sbjct: 22 IHIKTLTTPNENALKFLSTDGEMLQTRGSKSIVIKNTDENLINHSKLAQQIFLQCPGVES 81
Query: 54 VYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD-------DM 105
+ G DF+T+ KD W ++P ++ ++ + G+ +I + + +M
Sbjct: 82 LMIGDDFLTINKDRMVHWNSIKPEIIDLLTKQLAYGEDVISKEFHAVQEEEGEGGYKINM 141
Query: 106 GSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPS 163
+ E D V + I+E++D R+RPA+ DGGDI ++G+ G V+L ++GAC+ C S
Sbjct: 142 PKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCSS 201
Query: 164 ASETLKYGVANILNHFVPEVKDIRTV 189
+ TLKYG+ ++L H+V EVK++ +
Sbjct: 202 SEVTLKYGIESMLKHYVDEVKEVIQI 227
>gi|284037367|ref|YP_003387297.1| nitrogen-fixing NifU domain protein [Spirosoma linguale DSM 74]
gi|283816660|gb|ADB38498.1| nitrogen-fixing NifU domain protein [Spirosoma linguale DSM 74]
Length = 200
Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 15/194 (7%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEA----EISPLASRIFSIPGIASVYFG 57
I TE +PNP ++KF+ ++ G + ++ +A + SPLA +F + V+
Sbjct: 11 IFTEGSPNPNSMKFVVNFELVPTGLSFDYATPGDALLDGKASPLAVALFGFEFVRRVFIS 70
Query: 58 YDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
+F+TV KD + DW+ + V + ++F P+ + + ++ DS
Sbjct: 71 ANFVTVTKDDETDWDEVLLEVKLFLKDYFGEQKPVFSQRTVD-------TNTTKLDMDSE 123
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVAN 174
VQ+IK VL+ ++PAV DGG I F + + G V + ++G+CSGCPS++ TLK G+ N
Sbjct: 124 TVQKIKAVLEQYIKPAVESDGGAISFYSFDEPSGTVKVLLQGSCSGCPSSTLTLKAGIEN 183
Query: 175 ILNHFVPEVKDIRT 188
+L VPEVK +
Sbjct: 184 LLTRLVPEVKLVEA 197
>gi|72391004|ref|XP_845796.1| HIRA-interacting protein 5 [Trypanosoma brucei TREU927]
gi|62176423|gb|AAX70531.1| HIRA-interacting protein 5, putative [Trypanosoma brucei]
gi|70802332|gb|AAZ12237.1| HIRA-interacting protein 5, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 280
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 67/191 (35%), Positives = 106/191 (55%), Gaps = 4/191 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQ-VVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ ++ +TPNP L+F + L G ++ +A+ A SPLA +FSI G+ SV+
Sbjct: 61 IVVEKNETPNPDCLRFYSMELSFLPPGRSLDLPDAQHAGKSPLAELLFSISGVQSVFLAD 120
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
++ITVGK DW L P + I+E SG ++ G +D+ D + D V
Sbjct: 121 EYITVGKVPHVDWGSLVPQIQECIVEFAESGVGVLSEEGEACF-VDNNNDTDPEDDDDEV 179
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +KE+L R+RP + DGG++ + DG VF+ + GAC CPS+ TLK G+ +L
Sbjct: 180 VLAVKELLSARIRPLLRADGGNVRYISMDDGTVFVLLEGACKSCPSSGVTLKNGIERMLM 239
Query: 178 HFVPEVKDIRT 188
H++PEV +++
Sbjct: 240 HWIPEVVEVQE 250
>gi|149369678|ref|ZP_01889530.1| thioredoxin-related protein [unidentified eubacterium SCB49]
gi|149357105|gb|EDM45660.1| thioredoxin-related protein [unidentified eubacterium SCB49]
Length = 306
Score = 193 bits (491), Expect = 9e-48, Method: Composition-based stats.
Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 11/197 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E TPNPA LKF+ + LV G F N +A+ +PLA+ +F+ P + V+ ++I+
Sbjct: 109 IYGETTPNPAVLKFVANKP-LVTGTFDFKNIDDAKHAPLATALFNFPFVKEVFMSNNYIS 167
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDD------MGSGDFIESDS 115
V K D +W+ + + I + G I + L + ++ +S S
Sbjct: 168 VMKYDIAEWDEISMQLREFIRSYIEDGKEIFTDAMLNETIKEEQKAVASPTENGSDKSYS 227
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVA 173
+ I ++LD ++PAVA DGG I F Y V + ++GACSGCPSA+ TLK G+
Sbjct: 228 DIDNEIMDILDEYIKPAVASDGGHIAFDSYDANTKTVKVILQGACSGCPSATVTLKNGIE 287
Query: 174 NILNHFVPE-VKDIRTV 189
+L + V+ + +
Sbjct: 288 TMLRDMMKGRVEIVEAI 304
Score = 84.1 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I + T N +KF+ + + F N +EA SP+A ++F +P + +VY +FI
Sbjct: 6 IIIQPTNNENIVKFVANSFLTQAKSYEFKNIEEAVESPIAQQLFYLPFVKTVYISQNFIA 65
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGG 96
+ K W+ ++ V I E+ SG P+++
Sbjct: 66 IEKYNIVSWDMVQDEVAESINEYIESGKPVVNESA 100
>gi|149280243|ref|ZP_01886366.1| thioredoxin-related protein [Pedobacter sp. BAL39]
gi|149229080|gb|EDM34476.1| thioredoxin-related protein [Pedobacter sp. BAL39]
Length = 183
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 103/187 (55%), Gaps = 12/187 (6%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ TE TPNPAT+KF+ + +L+ G+ F+ + AE S A +F + V+F +F+T
Sbjct: 5 VYTEQTPNPATMKFMVNK-LLINGSEDFATRESAEHSQFAKELFKFNFVNGVFFASNFVT 63
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
+ K + DW+ + + + S I + S + +I
Sbjct: 64 ITKTEDADWQDIEALLKDFVKGAVESEYKIKEETQAEAPAFEG----------SDLEIKI 113
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
+++L + VRPAV +DGG I +K + +G+V + +RG+CSGCPS++ TLK G+ N+L VP
Sbjct: 114 QQILHDYVRPAVEQDGGAISYKSFDEGVVTVELRGSCSGCPSSTITLKSGIQNLLQRMVP 173
Query: 182 EVKDIRT 188
EVK++ +
Sbjct: 174 EVKEVVS 180
>gi|298206804|ref|YP_003714983.1| NifU-like domain protein [Croceibacter atlanticus HTCC2559]
gi|83849436|gb|EAP87304.1| NifU-like domain protein [Croceibacter atlanticus HTCC2559]
Length = 305
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 55/196 (28%), Positives = 104/196 (53%), Gaps = 10/196 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E TPNP+ LKF+ + ++V+ + F + + +PLA +F+ P + ++ ++++
Sbjct: 109 IYAESTPNPSVLKFVANKKLVVQ-SEEFKSIDDTANAPLAQALFNFPFVKEIFIDENYVS 167
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD-MKLDDMGSGDFIESD----SA 116
+ K D +W + + I +H +SG P++ + G+ + + D
Sbjct: 168 IQKYDMAEWGDITTELRDFISQHIMSGKPVVTEHRANKLAPQTNGGTTEKPQLDLSHLDD 227
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVAN 174
+ I E+LD ++PAVA DGG+I+F Y + V + ++GACSGCPS++ TLK G+
Sbjct: 228 TSKAIVEILDEYIKPAVASDGGNIMFDSYDEETKSVKVILQGACSGCPSSTMTLKNGIET 287
Query: 175 ILNHFVPE-VKDIRTV 189
+L + V+ + +
Sbjct: 288 MLRDMLNGKVEHVVAI 303
Score = 90.6 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I + T NP+ LKF + + + F N EA+ SPLA ++F +P + +VY +FI
Sbjct: 5 IDIQSTSNPSILKFETNKFLSRHDSFEFHNIDEAKPSPLAQKLFYLPFVKTVYIAQNFIA 64
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+ K D +W ++ V I+E+ SG+ +I + + + + S +
Sbjct: 65 IQKYDIAEWSDVQDEVKSQILEYLNSGEDVIIDKTPQKKSVPVTIYAESTPNPSVL 120
>gi|225011341|ref|ZP_03701795.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-3C]
gi|225004524|gb|EEG42492.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-3C]
Length = 301
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 56/191 (29%), Positives = 103/191 (53%), Gaps = 5/191 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E TPNP+ +K++ ++++ F N EA+ +PLA +F +P + V+ ++I+
Sbjct: 110 IYAESTPNPSVMKYVANKLIVP-ALFEFKNIDEAKDAPLAKELFLMPFVKEVFMDQNYIS 168
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K D +WE + + I +SG + + K + ++ ++I
Sbjct: 169 VTKYDVAEWEEINNELREKIRLFLMSGQESVGANTVQKEKEKAPTTLLHTDNLDDTSKQI 228
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHF 179
++L+ V+PAVA DGG+I+F Y + V + ++GACSGCPS++ TLK G+ N+L +
Sbjct: 229 VDILEEYVKPAVASDGGNIMFDSYDEVSKTVNVILQGACSGCPSSTFTLKNGIENMLKNM 288
Query: 180 VPE-VKDIRTV 189
+ + V + +
Sbjct: 289 MGDKVAQVIAI 299
Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
I T NP +KF + + F N +A+ SPLA ++F +P + +VY +FI
Sbjct: 6 HITIIPTNNPNIMKFETNHFISPDKNYEFQNIDQAKESPLAQQLFHLPFVKTVYISSNFI 65
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIH 93
+ K D WE ++ + ++++ +G ++
Sbjct: 66 GIEKYDIVGWEDIKDSLGQQLVDYLNTGAAVVA 98
>gi|325104464|ref|YP_004274118.1| Scaffold protein Nfu/NifU [Pedobacter saltans DSM 12145]
gi|324973312|gb|ADY52296.1| Scaffold protein Nfu/NifU [Pedobacter saltans DSM 12145]
Length = 183
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 107/190 (56%), Gaps = 14/190 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+ + TE TPNP T+KFI + +L+ G++ + + A S AS ++ + V+F +F
Sbjct: 3 ITVYTESTPNPNTMKFIVNK-LLINGSVDYPTRESATESRFASELYKFSFVNGVFFASNF 61
Query: 61 ITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE-SDSAVV 118
+T+ K + +W + P + + S + + +F++ S V
Sbjct: 62 VTITKSEDAEWADIEPILKEFVKGAVES-----------EYAVQSKKEEEFVDFEGSEVE 110
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+I+++L + V+PAV +DGG I +K + DG+V + +RG+CSGCPS++ TLK G+ ++L
Sbjct: 111 IKIQQILHDYVKPAVEQDGGAIAYKSFEDGVVTVELRGSCSGCPSSTITLKSGIQSLLQR 170
Query: 179 FVPEVKDIRT 188
VPEVK++ +
Sbjct: 171 MVPEVKEVVS 180
>gi|163786509|ref|ZP_02180957.1| thioredoxin-related protein [Flavobacteriales bacterium ALC-1]
gi|159878369|gb|EDP72425.1| thioredoxin-related protein [Flavobacteriales bacterium ALC-1]
Length = 300
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 57/181 (31%), Positives = 98/181 (54%), Gaps = 4/181 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNP+ LKF+ + VLV F++ +EA+ SPLA+ +F P I +++ +FI+
Sbjct: 109 VYAESTPNPSVLKFVCNK-VLVPSLYEFTSIEEAKPSPLATALFQFPFIKNIFIEKNFIS 167
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
+ K D +WE + + + + G I+++ + + E+ + I
Sbjct: 168 ITKFDIIEWEDITLQLREFLKSYIEDGKTILNDDAPQKLNKTEEAIEQKFEALDDTSKNI 227
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANILNHF 179
+L+ ++PAV DGG+I FK Y V + ++GACSGCPS++ TLK G+ N+L
Sbjct: 228 VNILEEYIKPAVESDGGNIEFKSYDANTKKVEVLLQGACSGCPSSTFTLKNGIENMLKEM 287
Query: 180 V 180
+
Sbjct: 288 L 288
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Query: 7 DTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKD 66
T N LKF + + + F+N +A+ SPLA ++F +P + VY +FI + +
Sbjct: 10 PTSNETILKFEADRFLTNHNSFEFNNIDDAKHSPLAQQLFYLPFVKKVYIATNFIAIERY 69
Query: 67 Q-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKL 102
+W+ ++ V I ++ + ++ +
Sbjct: 70 NIVEWKDVQNEVAAQIEDYLSNDGVVVTEEAIKPKAA 106
>gi|225012214|ref|ZP_03702651.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-2A]
gi|225003769|gb|EEG41742.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-2A]
Length = 295
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 57/191 (29%), Positives = 101/191 (52%), Gaps = 9/191 (4%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNPA +KF+ + LV ++ F N EA+ +PLA ++F +P + V+ ++++
Sbjct: 108 VYAESTPNPAVMKFVANKP-LVSHSVEFKNIDEAKNAPLAQKLFHLPFVKEVFIDANYVS 166
Query: 63 VGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
+ K + +WE + V I G+ I+ + S + ++ +V
Sbjct: 167 ITKFEVTEWEEVVMEVREFIRAFIEEGNVILTEAPIAIEIDQKNQSSNLTATEEQIVS-- 224
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+LD ++PAVA DGG+I+F Y + V + ++GACSGCPS++ TLK G+ +L
Sbjct: 225 --ILDEYIKPAVASDGGNIMFDSYDEVEKEVHVVLQGACSGCPSSTFTLKNGIETMLKEM 282
Query: 180 VPE-VKDIRTV 189
+P + + V
Sbjct: 283 MPGKIATVIAV 293
Score = 54.0 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Query: 16 FIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK-DQYDWEHLR 74
F Q + + +HF N EA+ +PL ++F +P + SV ++V + D +WE +
Sbjct: 19 FEVDQEIGPKEIVHFKNIDEAKGAPLIQQLFYLPFVKSVSLSEKKVSVERFDILEWEEVI 78
Query: 75 PPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES 113
V + + G +I + + +
Sbjct: 79 DEVKEQLQTYLNEGGVVIETQRNDKIPVSVYAESTPNPA 117
>gi|313677059|ref|YP_004055055.1| scaffold protein nfu/nifu [Marivirga tractuosa DSM 4126]
gi|312943757|gb|ADR22947.1| Scaffold protein Nfu/NifU [Marivirga tractuosa DSM 4126]
Length = 198
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 63/191 (32%), Positives = 106/191 (55%), Gaps = 11/191 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
I E PNP +LKF Q+++ EG + F + ++ +PLA +F + V++ +FI
Sbjct: 11 IYMEANPNPNSLKFATNQMLVPEGDSFDFPSIEDTAQAPLAEILFKKEYVDRVFYMSNFI 70
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
TV K +Y+W ++ V I E SG +I +++ D+ ++ + ++
Sbjct: 71 TVTKKPEYEWVEIQNDVKDTIKEFLESGKRVI------ELQAKDLFEETNTSENAELEEQ 124
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANILNH 178
IK +LD ++PAV +DGG I F Y V L ++GACSGCPS++ TLK G+ N+L
Sbjct: 125 IKNILDEYIKPAVEQDGGAISFHSYEKDTQRVNLLLQGACSGCPSSTITLKAGIENLLKR 184
Query: 179 FVP-EVKDIRT 188
+P +VK+++
Sbjct: 185 MLPNDVKEVQA 195
>gi|305665213|ref|YP_003861500.1| NifU-like protein [Maribacter sp. HTCC2170]
gi|88709966|gb|EAR02198.1| nifU related protein [Maribacter sp. HTCC2170]
Length = 300
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 58/192 (30%), Positives = 107/192 (55%), Gaps = 5/192 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+ + E TPNP+ +KF+ + ++ A F N EA+ S LA ++F +P + V+F ++
Sbjct: 107 ITVYAEVTPNPSVMKFVSNKRIVP-TAFEFKNIDEAKDSALAQQLFQLPFVKEVFFDENY 165
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
++V K D +WE + P+ M+ + G+ ++ + + S ES +
Sbjct: 166 VSVNKFDVAEWEDITMPLREMVRDFLAEGNEVVTVSAITLKSAEAPKSQLNNESLDDTSK 225
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDG--IVFLSMRGACSGCPSASETLKYGVANILN 177
+I ++L+ V+PAVA DGG+I+F+ Y V + ++GACSGCPS++ TLK G+ +L
Sbjct: 226 QIVDILEEYVKPAVASDGGNILFQSYEKDTKTVNVILQGACSGCPSSTFTLKNGIETMLK 285
Query: 178 HFVPE-VKDIRT 188
+ + + V ++
Sbjct: 286 NMMGDKVNEVVA 297
Score = 85.6 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I + T NPA LKF + F N EA+ SPLA ++F +P I +VYF +FI
Sbjct: 6 ITVKQTNNPAVLKFETNHFITKNNNYEFKNIDEAKNSPLAQQLFYLPFIKTVYFSGNFIG 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD 99
+ + D +W ++ V ++E+ SG+PI+ G
Sbjct: 66 LERFDIVEWADVKDEVAQQLVEYLNSGEPIVIEEEQGK 103
>gi|45185274|ref|NP_982991.1| ABR045Wp [Ashbya gossypii ATCC 10895]
gi|44980932|gb|AAS50815.1| ABR045Wp [Ashbya gossypii ATCC 10895]
Length = 239
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 63/199 (31%), Positives = 108/199 (54%), Gaps = 14/199 (7%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEG--AIHFSN--AKEAEISPLASRIF-SIPGIAS 53
+ I+T TPN LK++ G+++ G ++ N + +PLA ++F +PG+ +
Sbjct: 20 LHIKTLTTPNENALKYVSTDGELLQERGAPSVEIRNFDMELIRQAPLAEKLFAQVPGVEA 79
Query: 54 VYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE 112
V G DF+TV KD + W + P VL ++ + SG + G + + + E
Sbjct: 80 VMIGDDFVTVSKDAELGWAQVTPRVLEVLTQQLASGQAAVQ----GQVAVGGTERFQYDE 135
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKY 170
+ + I+E++ RVRPA+ DGGDI ++G+ G V+L ++GAC C S+ TLK+
Sbjct: 136 EEQEISDTIEEIIQTRVRPAIMDDGGDIQYRGWDPETGRVYLKLQGACKSCSSSEVTLKH 195
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ ++L H+V EV + V
Sbjct: 196 GIESMLKHYVEEVSGVEQV 214
>gi|79313311|ref|NP_001030735.1| NFU4; structural molecule [Arabidopsis thaliana]
gi|332642928|gb|AEE76449.1| NifU-like protein 4 [Arabidopsis thaliana]
Length = 222
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 62/147 (42%), Positives = 86/147 (58%), Gaps = 6/147 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+ TPNP++L F PG+ V+ G+ F N + A SPLA I+SI G+ V+FG DF
Sbjct: 80 MFIQTQSTPNPSSLMFYPGKPVMEVGSADFPNVRSALGSPLAKSIYSIDGVVRVFFGSDF 139
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+TV K D W+ L+P + +M+ + SG P+ + K E DS V
Sbjct: 140 VTVTKSDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQAAAAK-----DTAISEDDSETVA 194
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYR 146
IKE+L+ R+RPAV DGGDI + G+
Sbjct: 195 MIKELLETRIRPAVQDDGGDIEYCGFD 221
>gi|146299436|ref|YP_001194027.1| NifU domain-containing protein [Flavobacterium johnsoniae UW101]
gi|146153854|gb|ABQ04708.1| nitrogen-fixing NifU domain protein [Flavobacterium johnsoniae
UW101]
Length = 299
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 5/192 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+ + E TPNPA LKF+ ++ L A+ + N + SPLA +F P + V+ ++
Sbjct: 106 ITVYGETTPNPAALKFVVSRM-LTRNAVEYKNIDQTASSPLAQELFKFPYVKEVFIDENY 164
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
I+V K + DW+ + + I + +G ++ + +D+ + + Q
Sbjct: 165 ISVTKYEINDWQEITLELRTFIKQFIENGGTVLDESLIQTATKNDVTKDEAFDKLDVTSQ 224
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+I +L+ V+PAVA DGG+I F Y D V + ++GACSGCPS++ TLK G+ N+L
Sbjct: 225 QIINILEEYVKPAVAADGGNIAFDSYNEDDKTVKVILQGACSGCPSSTFTLKSGIENMLK 284
Query: 178 HFV-PEVKDIRT 188
+ E +
Sbjct: 285 SMLNDEAIKVEA 296
Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I ++T NP LKF + + F N EA+ SPLA ++F +P + +VY +FI
Sbjct: 4 ITIKETQNPTILKFEFEDFITQNQSFEFKNIDEAQASPLAQQLFYLPFVKTVYISGNFIA 63
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
+ + DW+ ++ V I G II K G+ + +A+ +
Sbjct: 64 IERYSIVDWDDVKDAVAEQITSFVDKGGVIIKVDENKAKKQPITVYGETTPNPAALKFVV 123
Query: 122 KEVLDNRVRPA 132
+L
Sbjct: 124 SRMLTRNAVEY 134
>gi|260838224|ref|XP_002613749.1| hypothetical protein BRAFLDRAFT_84497 [Branchiostoma floridae]
gi|229299138|gb|EEN69758.1| hypothetical protein BRAFLDRAFT_84497 [Branchiostoma floridae]
Length = 263
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 77/191 (40%), Positives = 102/191 (53%), Gaps = 24/191 (12%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT++TPNP +LKF+PG VL G F N A SPLA + +
Sbjct: 64 MFIQTQETPNPNSLKFLPGCEVLETGTFDFPNHSAAHASPLARLVHPLDD---------- 113
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
D YDW+ L+P + IM+ F SG PI+ + D VQ
Sbjct: 114 -----DTYDWQILKPDIFATIMDFFASGLPILTDEPP-------PSDTVIHPDDDETVQM 161
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
IKE+LD R+RP V DGGDIV+ G+ GIV L M+G+CS CPS+ TL+ GV N+L
Sbjct: 162 IKELLDTRIRPTVQEDGGDIVYVGFDQESGIVKLKMQGSCSSCPSSVVTLRSGVQNMLQF 221
Query: 179 FVPEVKDIRTV 189
++PEV+ + V
Sbjct: 222 YIPEVQGVEEV 232
>gi|260060626|ref|YP_003193706.1| nifU related protein [Robiginitalea biformata HTCC2501]
gi|88784756|gb|EAR15925.1| nifU related protein [Robiginitalea biformata HTCC2501]
Length = 300
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 56/191 (29%), Positives = 103/191 (53%), Gaps = 5/191 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNPA +K++ + ++ + F + +A SPLA ++F P + V+ +++I+
Sbjct: 109 VYAEVTPNPAVMKYVANKQLVPD-VFEFKDIDQARHSPLAQKLFGFPFVKEVFMDHNYIS 167
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K + +WE + + I E+ +G ++ G + +E + Q I
Sbjct: 168 VTKYEVAEWEDVSMELREFIREYLAAGGEVLEPGASAEKSQIAGVPEGNLEQMDPISQEI 227
Query: 122 KEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+L+ V+PAVA DGG+IVF+ Y V + ++GACSGCPS++ TLK G+ +L +
Sbjct: 228 AGILEEYVKPAVASDGGNIVFQSYEAESKTVHVILQGACSGCPSSTFTLKNGIQTMLQNM 287
Query: 180 VPE-VKDIRTV 189
+ + V ++ +
Sbjct: 288 MGDRVNEVVAI 298
Score = 85.6 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I ++T NPA LKF Q ++ +G+ + N EA+ SPLA ++F +P I +VY +F+
Sbjct: 6 ITLKETNNPAILKFEANQPLVTKGSYEYKNIDEAKDSPLAQQLFYLPFIKTVYISGNFVA 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLG 98
+ + D W+ ++ V ++E+ +G+P++
Sbjct: 66 MERFDIVTWDDVKQEVAQQLVEYLNAGEPVVDEPEQA 102
>gi|156839096|ref|XP_001643243.1| hypothetical protein Kpol_460p20 [Vanderwaltozyma polyspora DSM
70294]
gi|156113844|gb|EDO15385.1| hypothetical protein Kpol_460p20 [Vanderwaltozyma polyspora DSM
70294]
Length = 256
Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 16/205 (7%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEGA--IHFSNAKEA--EISPLASRIF-SIPGIAS 53
+ ++T TPN LKFI G++ G + N ++ E S A R+F PGI S
Sbjct: 27 LHVKTVSTPNENALKFISTDGELFQDRGTHSLEIKNTDDSLIEQSKFAQRLFVQCPGIES 86
Query: 54 VYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG---- 108
+ G DF+TV KD+ W ++P VL ++++ SG+ I+ K + G
Sbjct: 87 LMIGDDFVTVNKDEMIHWNQIKPNVLEILLQQLSSGESIVTQKFHEISKESESGYDIQLP 146
Query: 109 --DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSA 164
+ E + V I E++ R+RPA+ DGGDI ++GY G V+L ++GAC C S+
Sbjct: 147 KFELNEDEQEVSDMIDELIQTRIRPAIQDDGGDIQYRGYDPKTGKVYLKLQGACKSCSSS 206
Query: 165 SETLKYGVANILNHFVPEVKDIRTV 189
+TLKYG+ ++L H+V EV+++ +
Sbjct: 207 EDTLKYGIESMLKHYVEEVEEVIQI 231
>gi|254582903|ref|XP_002499183.1| ZYRO0E05830p [Zygosaccharomyces rouxii]
gi|238942757|emb|CAR30928.1| ZYRO0E05830p [Zygosaccharomyces rouxii]
Length = 254
Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 68/203 (33%), Positives = 107/203 (52%), Gaps = 15/203 (7%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEGA--IHFSNAKEA--EISPLASRIF-SIPGIAS 53
+ I+T TPN LKFI G+++ +G+ + N+ E+ E S LA RIF PG+ S
Sbjct: 25 IAIKTMTTPNENALKFISTDGEMLQDKGSSSLEIKNSDESLIEHSNLAQRIFLQCPGVES 84
Query: 54 VYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDD-----MGS 107
+ G DF+TV KD W ++P V+ ++ SG+ ++ + D
Sbjct: 85 LMIGDDFLTVNKDSMVHWNQIKPGVIELLTSQLASGEDVVSDEFHTIRDSDAGYEVTAPK 144
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSAS 165
+ E D V I E++ R+RPA+ DGGDI ++ Y G V+L ++GAC C S+
Sbjct: 145 FELSEEDEEVSDMIDELIQTRIRPAIQDDGGDIQYRAYDPKTGTVYLKLQGACKSCSSSE 204
Query: 166 ETLKYGVANILNHFVPEVKDIRT 188
+TLK G+ +L H+V EV ++
Sbjct: 205 DTLKAGIEGMLKHYVDEVTNVVQ 227
>gi|254566217|ref|XP_002490219.1| Protein involved in iron metabolism in mitochondria [Pichia
pastoris GS115]
gi|238030015|emb|CAY67938.1| Protein involved in iron metabolism in mitochondria [Pichia
pastoris GS115]
gi|328350616|emb|CCA37016.1| NifU-like protein 5, mitochondrial [Pichia pastoris CBS 7435]
Length = 257
Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 69/211 (32%), Positives = 109/211 (51%), Gaps = 24/211 (11%)
Query: 3 IQTEDTPNPATLKFIP-GQVVLVE----GAIHFSNAKEA-EISPLASRIFSIPGIASVYF 56
IQT TPN LKFI G +L I + A E SPLA ++F +PG+ S+
Sbjct: 22 IQTASTPNDNALKFITKGVRLLPPHIQKSTIEIDDLASATEKSPLALQLFKVPGVKSILI 81
Query: 57 GYDFITVGK--------DQYDWEHLRPPVLGMIMEHFISG--------DPIIHNGGLGDM 100
G DFITV K D W+ L+P ++ +I P
Sbjct: 82 GDDFITVNKVDEKLSNSDHSRWQFLKPQIINVIDRSLSKSSEKKVNVLTPQFLENISNVH 141
Query: 101 KLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGAC 158
D + S + +++D V IKE+++ R+RPA+ DGGD+ F+ + GIV++ ++GAC
Sbjct: 142 HDDYIVSQEPLDTDDDVTYEIKELINTRIRPAIQDDGGDVQFRRFDPDAGIVYIKLKGAC 201
Query: 159 SGCPSASETLKYGVANILNHFVPEVKDIRTV 189
C + +TLK+G+ ++L H+V EVK+++ +
Sbjct: 202 KSCSLSEDTLKHGIESMLQHYVEEVKEVKAI 232
>gi|319953626|ref|YP_004164893.1| nitrogen-fixing nifu domain-containing protein [Cellulophaga
algicola DSM 14237]
gi|319422286|gb|ADV49395.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga
algicola DSM 14237]
Length = 300
Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 56/191 (29%), Positives = 103/191 (53%), Gaps = 5/191 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNPA +KF+ + ++ A F N EA+ S LA ++F P + V+F ++ +
Sbjct: 109 VYAESTPNPAVMKFVSNKTIVP-TAFEFKNIDEAKDSELAKKLFHFPFVKEVFFDENYAS 167
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K + DW + + +I G ++ + K + + + ++I
Sbjct: 168 VTKYEVADWNEVTFDIRELIRNFIADGLEVVSAESVVKKKAEAPKTQLQDANLDDTSKKI 227
Query: 122 KEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
++L+ V+PAVA DGG+I+FK Y V + ++GACSGCPS++ TLK G+ ++L +
Sbjct: 228 IDILEEYVKPAVASDGGNIMFKSYDKETKTVNVILQGACSGCPSSTYTLKNGIESMLKNM 287
Query: 180 VPE-VKDIRTV 189
+ + V+++ +
Sbjct: 288 MADHVENVVAI 298
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I +T NPA LKF + + + EA+ SPLA ++F +P + +VY +FI
Sbjct: 6 ITIVETNNPAILKFDTNHFITKSNNYEYKDIDEAKNSPLAQQLFYLPFVKTVYISANFIA 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGG 96
+ + +W+ ++ V ++E+ SG+P+I
Sbjct: 66 LERFSIVEWDDVKDEVAQQLVEYLNSGEPVIFEDK 100
>gi|328350796|emb|CCA37196.1| NifU-like protein 5, mitochondrial [Pichia pastoris CBS 7435]
Length = 210
Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats.
Identities = 62/179 (34%), Positives = 100/179 (55%), Gaps = 11/179 (6%)
Query: 14 LKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITV-GKDQYDWEH 72
+K +P + I F N ++A SPLA ++F I G+ ++ G+DFITV K Q DW
Sbjct: 1 MKILP-----EQTTIEFLNGRQAFKSPLALKLFGIDGVKTIMIGHDFITVEKKTQDDWSL 55
Query: 73 LRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPA 132
L+P + ++ E +G P+++ D + + + VV +KE++ R+RPA
Sbjct: 56 LKPEIFAVLTESLNNGTPVLNEQHQSDANDQALLEE---DDEDEVVSMVKELIFTRIRPA 112
Query: 133 VARDGGDIVFK--GYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+ DGGDI F Y G V+L +RGAC C S+S TLK G+ ++L H++ EV+ + +
Sbjct: 113 IQDDGGDIEFVRFEYETGTVYLRLRGACRSCSSSSITLKNGIESMLKHYIEEVEAVEQI 171
>gi|322492565|emb|CBZ27842.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 281
Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 62/192 (32%), Positives = 105/192 (54%), Gaps = 4/192 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--VEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ ++T +TPNP ++F + E ++ + +A SPLA +F + G+ +V+
Sbjct: 63 IVVETNETPNPDCIRFFSMDISFLKPEFSVDIPSPAQAYKSPLAEALFGVAGVQAVFLAD 122
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+++TV K Q DW L P + +I+E S + ++ G ++ L + E D V
Sbjct: 123 EYVTVRKHPQEDWAALMPIIKEVIVEFAESKENVLSAAGEEEL-LGYNNDTEPDEDDDEV 181
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +KE+L R+RP + DGG++ F +G VFL + GAC CPS+ TLK G+ +L
Sbjct: 182 VLAVKELLATRIRPMLRADGGNVRFIDMDEGTVFLLLEGACKSCPSSHITLKSGIERMLM 241
Query: 178 HFVPEVKDIRTV 189
H++PEV + + V
Sbjct: 242 HWIPEVVEAQEV 253
>gi|88802135|ref|ZP_01117663.1| NifU protein [Polaribacter irgensii 23-P]
gi|88782793|gb|EAR13970.1| NifU protein [Polaribacter irgensii 23-P]
Length = 301
Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats.
Identities = 61/192 (31%), Positives = 102/192 (53%), Gaps = 6/192 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYDFI 61
+ E TPNPA +KF + L + + F N EA SPLA IF+ P + V+ ++I
Sbjct: 109 VYAEVTPNPAVMKFGTNKA-LTQTDVEFKNIDEASASSPLAQAIFNFPFVQQVFISDNYI 167
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+V K D +W + V I E+ G II ++ + + + +
Sbjct: 168 SVTKYDMVEWNEVYGEVRTFIREYLADGKTIIKELPKEEVVETANKAQEPEVVLEGISAQ 227
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNH 178
I ++LD ++PAVA DGG+I F+ Y + +V + ++GACSGCPS++ TLK G+ N+L
Sbjct: 228 IVDILDEYIKPAVASDGGNIAFRSYDEQTKVVRVILQGACSGCPSSTATLKNGIENLLKE 287
Query: 179 FVPE-VKDIRTV 189
+P+ + ++ +
Sbjct: 288 MLPDQINEVVAI 299
Score = 74.4 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I ++T N +K+ +++ G+ F+N EA+ SPLA +F +P + V+ +FI
Sbjct: 6 ITIQETTNNTIIKYNSNTILINGGSYEFNNIDEAKNSPLAQELFYLPFVKKVFITANFIA 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG 108
+ + D +W ++ V I G+ +++ + ++ +
Sbjct: 66 IQRFDILEWIDVQEEVKEQIEAFLNDGNIVVNEQKTSKKEAIEVYAE 112
>gi|295132490|ref|YP_003583166.1| nifU related protein [Zunongwangia profunda SM-A87]
gi|294980505|gb|ADF50970.1| nifU related protein [Zunongwangia profunda SM-A87]
Length = 309
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNP +KF+ + LV A F N +A SPLA ++F P + V+ ++++
Sbjct: 109 VYAESTPNPKVMKFVANRK-LVLHAAEFKNIDDAAESPLAQKLFHFPFVKEVFIDENYVS 167
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD---------FIE 112
+ K D W+ + + I G+ +++N + GS I+
Sbjct: 168 INKYDVASWDEITMELREFIRNFIQEGNSVLNNDAITGAPEGKNGSETSKTAPKPQINID 227
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKY 170
Q++ +L+ ++PAVA DGG+I+F Y V + ++GACSGCPS++ TLK
Sbjct: 228 ELDDTSQQVVAILEEYIKPAVASDGGNILFDSYNEESRTVKVILQGACSGCPSSTMTLKS 287
Query: 171 GVANILNHFVPE-VKDIRTV 189
G+ +L + V + V
Sbjct: 288 GIETMLRDMLKGKVDYVEAV 307
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I + T P +KF + + F N EA SP+A ++F +P + +VY +FI
Sbjct: 6 INIQHTTQPEIVKFEANKFLTKHENFEFKNIDEAAKSPIAQQLFYLPFVKTVYISQNFIA 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD 99
+ K D W + V I + G +I
Sbjct: 66 IEKYDIVAWPEVENEVAEQIQNYLNKGGIVIKTDEQQK 103
>gi|50312363|ref|XP_456215.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645351|emb|CAG98923.1| KLLA0F25476p [Kluyveromyces lactis]
Length = 256
Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 112/205 (54%), Gaps = 16/205 (7%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEGA--IHFSNAKEA--EISPLASRIFS-IPGIAS 53
+ I+T TPN LKF+ G ++ +G + N E + +P S++F PG+ +
Sbjct: 28 IHIKTLTTPNENALKFVSTDGGLLQEKGTQSVEIKNTDEELLKHAPFPSKVFQQCPGVEA 87
Query: 54 VYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG---- 108
+ G DF+T+ KD+ W + P V+ ++++H SG P K ++G
Sbjct: 88 MMIGDDFVTINKDELIHWNQVTPTVIDLLVQHLASGKPTFLPDFFDVKKSSEVGYDVDIP 147
Query: 109 --DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSA 164
++ E + + + I E++ R+RPA+ DGGDI ++G+ G V+L ++GAC C S+
Sbjct: 148 KFEYDEDEQEISEMIDELIQTRIRPAIMDDGGDIQYRGWNPETGTVYLKLQGACKSCSSS 207
Query: 165 SETLKYGVANILNHFVPEVKDIRTV 189
+TLK+G+ +L H++ EV+D+ +
Sbjct: 208 EDTLKHGIEAMLKHYIEEVEDVVQI 232
>gi|126663121|ref|ZP_01734119.1| thioredoxin-related protein [Flavobacteria bacterium BAL38]
gi|126624779|gb|EAZ95469.1| thioredoxin-related protein [Flavobacteria bacterium BAL38]
Length = 299
Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats.
Identities = 53/191 (27%), Positives = 101/191 (52%), Gaps = 5/191 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNP+ LKF+ + +L + A+ N E SPLA +F P + ++ ++I+
Sbjct: 108 VYAETTPNPSVLKFVCNK-LLTKTALECKNIDETIASPLAKELFKFPFVKEIFIDENYIS 166
Query: 63 VGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K +W+ + + I E+ +G+ +I + ++ + ++ Q+I
Sbjct: 167 VTKFAVTEWDEITLELRTFIKEYIENGNTVIDETAIVKTEIHQKQQEAYFDTLDVTSQQI 226
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+++ V+PAV DGG+I+F+ + + V + ++GACSGCPS++ TLK G+ N+L
Sbjct: 227 INIIEEYVKPAVQSDGGNIMFESFDPIEKRVKVILQGACSGCPSSTFTLKNGIENMLKDM 286
Query: 180 V-PEVKDIRTV 189
+ E + +
Sbjct: 287 LKDENIKVEAI 297
Score = 74.8 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I T+ T NPA +KF + ++ F N E + SPLA ++F +P + +VY +FI
Sbjct: 4 IATKITQNPAIVKFELDENIVRSENFEFKNIDETQNSPLAKQLFFLPFVKTVYVSGNFIA 63
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+ K +WE ++ V I E +G II K + + S +
Sbjct: 64 IEKFSIVEWEDVQEDVANQINEFISNGGEIIKIDENKTKKQPVTVYAETTPNPSVL 119
>gi|157870953|ref|XP_001684026.1| hypothetical protein [Leishmania major strain Friedlin]
gi|68127094|emb|CAJ04535.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 240
Score = 187 bits (476), Expect = 5e-46, Method: Composition-based stats.
Identities = 61/192 (31%), Positives = 106/192 (55%), Gaps = 4/192 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVL--VEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ ++T +TPNP ++F + E ++ ++ +A SPLA +F + G+ +V+
Sbjct: 22 IVVETNETPNPDCMRFFSMDLSFLKPEFSMDITSPAQAYKSPLAEALFGVAGVQAVFLAD 81
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+++TV K Q DW L P + +I+E S + ++ G ++ L + E D V
Sbjct: 82 EYVTVRKHPQADWAALIPIIKEVIVEFAESKENVLSAAGEEEL-LGYNNDTEPDEDDDEV 140
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +KE+L R+RP + DGG++ F +G VFL + G+C CPS+ TLK G+ +L
Sbjct: 141 VLAVKELLATRIRPMLRADGGNVRFIDMDEGTVFLLLEGSCKSCPSSHITLKSGIERMLM 200
Query: 178 HFVPEVKDIRTV 189
H++PEV + + V
Sbjct: 201 HWIPEVVEAQEV 212
>gi|150026140|ref|YP_001296966.1| hypothetical protein FP2102 [Flavobacterium psychrophilum JIP02/86]
gi|149772681|emb|CAL44164.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
Length = 298
Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats.
Identities = 51/191 (26%), Positives = 98/191 (51%), Gaps = 7/191 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNPA +KF+ + L + + N + SPLA +F P + ++ ++++
Sbjct: 107 VYAESTPNPAVMKFVASKK-LTKTIVECKNIDQTHASPLAKELFKFPFVKEIFIDENYLS 165
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
+ K +W+ + + I E +G ++ + K ++ ++ Q+I
Sbjct: 166 ITKYAVAEWQEITLELRTFIKEFIENGKIVVDETKIVATKHEEKQEITNFDNLDVTSQKI 225
Query: 122 KEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+++ +RPAVA DGG+I+F Y V + ++GACSGCPS++ TLK G+ ++L
Sbjct: 226 INIIEEYIRPAVAADGGNILFDSYCQDTKQVKVILQGACSGCPSSTFTLKNGIESMLKDM 285
Query: 180 V--PEVKDIRT 188
+ PE++ +
Sbjct: 286 LNQPELR-VEA 295
Score = 77.9 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
I +DT NP LKF + + + N EA SPLA ++F +P + +VY +FI
Sbjct: 3 LITIKDTNNPNILKFEFSYFITPNQSYEYKNIDEAGASPLAQQLFYLPFVKTVYISGNFI 62
Query: 62 TVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD 99
+ K WE ++ V + +G ++
Sbjct: 63 AIEKYNIVQWEDVKHDVADQMEAFVSNGGEVVKQTETPK 101
>gi|332877772|ref|ZP_08445513.1| NifU-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684352|gb|EGJ57208.1| NifU-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 298
Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats.
Identities = 63/193 (32%), Positives = 105/193 (54%), Gaps = 8/193 (4%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFS-IPGIASVYFGYDFI 61
+ TE TPNPA +KF+ + LV I + +A EA +PLA +F P I V+F D+I
Sbjct: 108 LYTETTPNPAVMKFVANKR-LVPTIIEYKSATEAAEAPLAQALFQAFPFITEVFFDNDYI 166
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+V K D DWE P + I ++ + +I+ + + + + Q+
Sbjct: 167 SVTKTDTADWEEESPRLRAFIKDYLAAEKTVINISEVKKWQTAVQAHLLSKVTTDPISQQ 226
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANILNH 178
I +++ V+PAVA DGG+I F Y+ V + ++GACSGCPS+++TLK G+ IL +
Sbjct: 227 IVAIIEEHVKPAVASDGGNIQFISYQPDTHHVEVLLQGACSGCPSSTQTLKKGIEAILKN 286
Query: 179 FV--PEVKDIRTV 189
+ P++ ++ +
Sbjct: 287 KLGNPDI-NVEAI 298
Score = 74.4 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVG 64
+ T NP +K + LV+G+ + N EA+ +PLA +F +P I +VY +FI +
Sbjct: 8 VQPTANPDIIKLEANRP-LVKGSYEYKNVDEAKNAPLAKELFYLPFIKTVYISSNFIALK 66
Query: 65 K-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGG 96
+ +W+ ++ V I + SG P+++N
Sbjct: 67 RFPIIEWKDVQEEVAQQIAVYLQSGRPLVNNDS 99
>gi|227536308|ref|ZP_03966357.1| nifU domain protein [Sphingobacterium spiritivorum ATCC 33300]
gi|300772344|ref|ZP_07082214.1| NifU domain protein [Sphingobacterium spiritivorum ATCC 33861]
gi|227243915|gb|EEI93930.1| nifU domain protein [Sphingobacterium spiritivorum ATCC 33300]
gi|300760647|gb|EFK57473.1| NifU domain protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 184
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 12/178 (6%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ TE TPNPAT+KF+ + +L+ G++ + N ++A+ SP A +F + V+F +F+T
Sbjct: 6 VYTESTPNPATMKFLVNK-LLINGSLDYPNKEKAQESPFAFELFKFNFVTGVFFASNFVT 64
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
+ K D +W + + + S + D + + V +I
Sbjct: 65 ITKSDDVEWSDIEAILKDFVKGAVESELAVKEVHHDEDTNFEG----------TEVEVKI 114
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
++VL + VRPAV +DGG I +K + +GIV + +RG+CSGCPS++ TLK G+ +L
Sbjct: 115 QQVLHDYVRPAVEQDGGAIHYKSFDNGIVTVELRGSCSGCPSSTITLKSGIEGLLKRM 172
>gi|149525599|ref|XP_001517848.1| PREDICTED: similar to HIRA interacting protein 5 [Ornithorhynchus
anatinus]
Length = 180
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 9/150 (6%)
Query: 42 ASRIFSIPGIASVYFGYDFITVGKD--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD 99
+ +F I G+ SV+ G DFITV K+ DW L+P + IM+ F SG P++
Sbjct: 29 SRHLFRIEGVKSVFLGPDFITVTKENEDVDWNLLKPDIYATIMDFFASGLPVVTEEAPS- 87
Query: 100 MKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACS 159
+ ES AVV I+ +L + RP V DGGD++++G+ DG+V L ++G+C+
Sbjct: 88 -----AEAARARESKDAVV-LIERLLSSMARPTVQEDGGDVIYRGFEDGVVQLKLQGSCT 141
Query: 160 GCPSASETLKYGVANILNHFVPEVKDIRTV 189
CPS+ TLK G+ N+L ++PEV+ + V
Sbjct: 142 SCPSSIVTLKSGIQNMLQFYIPEVEGVEQV 171
>gi|197106639|ref|YP_002132016.1| thioredoxin-like domain protein [Phenylobacterium zucineum HLK1]
gi|196480059|gb|ACG79587.1| thioredoxin-like domain protein [Phenylobacterium zucineum HLK1]
Length = 233
Score = 183 bits (466), Expect = 8e-45, Method: Composition-based stats.
Identities = 69/194 (35%), Positives = 100/194 (51%), Gaps = 17/194 (8%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAK--EAEISPLASRIFSIPGIASVYFGY 58
M I TE TPNP KF+P L +G H + + SPLA+R+F++ + V
Sbjct: 1 MLILTETTPNPEARKFLP-HARLTDGTAHAFDRTGFDPAASPLAARLFALGSVRHVLIAE 59
Query: 59 DFITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
DF+TV + D W LR + I +H SG P + G ++ S
Sbjct: 60 DFVTVTRETDGEAWTTLRIKAIAEIADHLESGAPAVAAEGADPPDPEE----------SQ 109
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVAN 174
V I++VL VRP VARDGGD++F + G++++ M+GAC GCPS+ TLK G+
Sbjct: 110 VEGEIRQVLGLYVRPGVARDGGDVLFDRFEPDTGVLWIRMQGACGGCPSSRLTLKAGIEQ 169
Query: 175 ILNHFVPEVKDIRT 188
I+ +VPEV +
Sbjct: 170 IVRRYVPEVLRVEE 183
>gi|254495078|ref|ZP_05108002.1| NifU-like protein [Polaribacter sp. MED152]
gi|85819428|gb|EAQ40585.1| NifU-like protein [Polaribacter sp. MED152]
Length = 301
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 60/192 (31%), Positives = 105/192 (54%), Gaps = 7/192 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFGYDFI 61
+ E TPNPA +KF + L + + + N +EA + SPLA IF+ P + V+ ++I
Sbjct: 110 VYAEVTPNPAVMKFGTNKA-LTQTDVEYKNIEEASKSSPLAQAIFNFPFVKEVFISDNYI 168
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+V K D +W + V I E+ + G II + + +E + +
Sbjct: 169 SVTKYDMVEWNEVFAEVRSFIREYLVDGKTIIKDLPTVETSKTPEVVAPVVE-LEGIPAQ 227
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILNH 178
I ++LD ++PAVA DGG+I F+ Y + +V + ++GACSGCPS++ TLK G+ ++L
Sbjct: 228 ISDILDEYIKPAVAGDGGNIAFRSYDEQNKVVSVILQGACSGCPSSTATLKNGIESLLKE 287
Query: 179 FVP-EVKDIRTV 189
+P ++ ++ +
Sbjct: 288 MLPNQINEVVAI 299
Score = 86.8 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I ++T N LKF +V++ G+ FSN EA+ SPLA ++F +P + V+ +FI
Sbjct: 6 ITIQETTNETILKFNSTKVLINGGSYEFSNIDEAKNSPLAQQLFYLPFVKKVFITANFIA 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+ + D +W ++ V I + G+ +++ K + + + +
Sbjct: 66 IQRFDIVEWADVQDEVAEQIEAYISDGNIVVNEETTSSKKEAIEVYAEVTPNPAVM 121
>gi|315223924|ref|ZP_07865769.1| nitrogen-fixing NifU domain protein [Capnocytophaga ochracea F0287]
gi|314946096|gb|EFS98100.1| nitrogen-fixing NifU domain protein [Capnocytophaga ochracea F0287]
Length = 299
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 58/184 (31%), Positives = 97/184 (52%), Gaps = 5/184 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIF-SIPGIASVYFGYD 59
+ + TE TPNP+ +KF+ + LV I + + KE + +P+A +F P I V+F +
Sbjct: 105 ISVYTETTPNPSVMKFVANKR-LVPTIIEYKHIKETDEAPMAKALFTQFPFIEEVFFDDN 163
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+I+V K D +W + P + I + G +I + + + + + V
Sbjct: 164 YISVTKKDNKEWAMVTPNIREFIKNYLSEGHTLISSSEIKRHQQATQERLLSMVTTDEVS 223
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++I ++D V+PAVA DGG+I F Y V + ++GACSGCPS++ TLK G+ IL
Sbjct: 224 KQIVAIIDEFVKPAVASDGGNIQFISYNPETHYVEVILQGACSGCPSSTLTLKKGIEVIL 283
Query: 177 NHFV 180
+
Sbjct: 284 KDKL 287
Score = 67.1 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVG 64
+ T +P +K + LV+G+ + N EA+ SPLA +F +P + +VY +FI +
Sbjct: 8 VQPTSSPDIIKLEANKA-LVKGSYEYKNIDEAKNSPLAKELFYLPFVKTVYISSNFIALK 66
Query: 65 K-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES 113
+ +W+ ++ V ++ + SG I+ G + S
Sbjct: 67 RFPIIEWKDVQEEVAQQVLLYLQSGREIVSTEGEQKEIISVYTETTPNPS 116
>gi|228472622|ref|ZP_04057382.1| nitrogen-fixing NifU domain protein [Capnocytophaga gingivalis ATCC
33624]
gi|228276035|gb|EEK14791.1| nitrogen-fixing NifU domain protein [Capnocytophaga gingivalis ATCC
33624]
Length = 299
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 14/195 (7%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E TPNP +KF+ + LV F +EAE SPLA +F + SV+F ++++
Sbjct: 111 IYVESTPNPMAMKFVANKK-LVSRPYEFKTIEEAENSPLAQALFGFDFVKSVFFDANYVS 169
Query: 63 VGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+ + WE + + ++ + G ++ + + + I S ++
Sbjct: 170 ITRLPRSTPWEEVMMETREFLRQYLMEGKTVVKVAVSEEDRPKGLPRLGDIYS-----KK 224
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANILNH 178
I +LD +RPAV+ DGG+I F Y V + ++GAC+GCPS+ TLK G+ +L
Sbjct: 225 IVALLDQYIRPAVSSDGGNIEFVSYDKETHKVKVVLQGACNGCPSSRITLKQGIEGLLRE 284
Query: 179 FVPE----VKDIRTV 189
+ + V+ + V
Sbjct: 285 QLKDDKLTVEAVDNV 299
Score = 54.4 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKD-QYDWEHLRPPVLGM 80
VLV+G +S + SPLA + +P I +VYF +FI + WE + P ++G
Sbjct: 21 VLVKGNYQYSKGDNTQDSPLAGELLRLPFIKTVYFSANFIALQSTGNIRWEEVAPELVGQ 80
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDM 105
I G+ +++ G +
Sbjct: 81 IETALSQGEALVYLPGEETQETAPK 105
>gi|300776224|ref|ZP_07086083.1| nitrogen-fixing NifU [Chryseobacterium gleum ATCC 35910]
gi|300505357|gb|EFK36496.1| nitrogen-fixing NifU [Chryseobacterium gleum ATCC 35910]
Length = 292
Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats.
Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 9/192 (4%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFS-IPGIASVYFGYDFI 61
I E TPNP +KF+ ++++ EG + + AE PLA IF V+ +F+
Sbjct: 103 IYAEMTPNPNVMKFVSSKLLM-EGFVEVKSKDAAEEVPLAQAIFKEFDFATEVFISDNFV 161
Query: 62 TVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
V +D +W + V +I E+ +G I + K ++ + Q+
Sbjct: 162 AVTRDNSVEWHQVMMTVRALIAEYLQNGGEI---SKIEPQKHENPVEKIINRDYTEDEQK 218
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
I ++L+ V PAV DGG I Y + + ++GACSGCPS++ TLK G+ NIL
Sbjct: 219 ISDILNEYVAPAVENDGGKISLMEYDQENKTAKMLLQGACSGCPSSTATLKNGIENILKQ 278
Query: 179 FVPE-VKDIRTV 189
FVP+ V+ + V
Sbjct: 279 FVPDLVEKVEAV 290
Score = 68.3 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVG 64
E T NP +KF+ L+ G++ + PLA +F+ P + ++ +F+ V
Sbjct: 6 IEPTENPKVMKFVADYN-LIPGSLELDRNSDISEIPLAQELFNYPFVERIFITANFVAVA 64
Query: 65 K-DQYDWEHLRPPVLGMIMEHFISG 88
K D +WEH+ + +I + ++
Sbjct: 65 KQDTVEWEHVAESLKNVIEDELLAN 89
>gi|322827929|gb|EFZ31905.1| hypothetical protein TCSYLVIO_1772 [Trypanosoma cruzi]
Length = 261
Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 1 MFIQTEDTPNPATLKF-IPGQV----VLVEGAIHFSNAKEAEISPLASRIFSIPG--IAS 53
M + TPNP L F IP + ++ A + PL++ IF G +AS
Sbjct: 11 MQLHAAPTPNPLCLAFHIPSSTYDGFIPNGQTCEVAHRGLAWVHPLSNGIFEQYGQEVAS 70
Query: 54 VYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE 112
V+ +++ DW L + I + + + + + DD+ E
Sbjct: 71 VFIAPRHVSITVYPNVDWSTLEWSISSFIGHYLLFVNECVPAAKEYTLMEDDL---RIHE 127
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKY 170
DS V+Q IKE+L +VRP V RDGGD+ + D G+V L+M GAC CPS+S TLK
Sbjct: 128 EDSEVLQCIKELLREQVRPMVQRDGGDVKLLNFNDETGVVSLAMLGACRTCPSSSNTLKD 187
Query: 171 GVANILNHFVPEVKDIRT 188
G+ ++ HF+PEV ++
Sbjct: 188 GIERVMKHFLPEVTEVVE 205
>gi|325955388|ref|YP_004239048.1| nitrogen-fixing NifU domain-containing protein [Weeksella virosa
DSM 16922]
gi|323438006|gb|ADX68470.1| nitrogen-fixing NifU domain-containing protein [Weeksella virosa
DSM 16922]
Length = 295
Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats.
Identities = 57/192 (29%), Positives = 104/192 (54%), Gaps = 6/192 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFS-IPGIASVYFGYDFI 61
+ E TPNPA +KF+ + +LV I + ++A+ P+A+ IF P I V+ ++I
Sbjct: 103 LYAEMTPNPAVMKFVSNK-LLVPSIIEIKSREKAQNVPIATAIFQEYPFIEEVFIAENYI 161
Query: 62 TVGKDQYD-WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
++ K+ + W+ V ++ + + I ++ ++ + IE + V Q+
Sbjct: 162 SLTKNDTESWDLWTMDVRSFVLSYLQTDGKIFNDDYEFVTEIPHEVAIKSIEEMTDVEQQ 221
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNH 178
IK +LD V+PAVA DGG+I + + + ++GACSGCPS++ TLK+G+ +L
Sbjct: 222 IKAILDEYVQPAVANDGGNIELIEFDEQTKTAKMLLQGACSGCPSSTATLKHGIEGLLKQ 281
Query: 179 FVPEVK-DIRTV 189
+PEV ++ +
Sbjct: 282 MLPEVVNNVEAI 293
Score = 79.1 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 3 IQTEDTPNPATLKFI-PGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
I TE+TPNP LKF+ P Q L G + + AE SPLA + + P I V+ +F+
Sbjct: 4 IYTENTPNPNILKFVCPTQ--LTAGGVEYKKDDSAENSPLAQVLLTFPFIDKVFITANFV 61
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFI 86
+ K D WE + ++ +I EH+
Sbjct: 62 ALEKIDTIKWEDVSDDLIEIIQEHYD 87
>gi|89889561|ref|ZP_01201072.1| thioredoxin containing NifU domain [Flavobacteria bacterium BBFL7]
gi|89517834|gb|EAS20490.1| thioredoxin containing NifU domain [Flavobacteria bacterium BBFL7]
Length = 214
Score = 180 bits (457), Expect = 8e-44, Method: Composition-based stats.
Identities = 52/193 (26%), Positives = 100/193 (51%), Gaps = 7/193 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNP+ +KF+ + ++V F + + + LA ++++ P + +Y ++++
Sbjct: 21 VYAEATPNPSVMKFVANKKLVVNST-EFKSIADTADNTLARQLYNFPFVKEIYADENYVS 79
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI--ESDSAVVQ 119
+ K D W+ + + I E +G I + + + + E+ V +
Sbjct: 80 IQKHDIASWDEVTFEIRSFIKEAIENGAEIGSSKHEAGTVKKEGENIELPKFENLDDVSK 139
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANILN 177
++ E+LD ++PAVA DGG+IVF Y + V + ++GACSGCPS++ TLK G+ +L
Sbjct: 140 KVVEILDEYIKPAVASDGGNIVFDSYDENTKEVKVILQGACSGCPSSTMTLKSGIETMLR 199
Query: 178 HFVPE-VKDIRTV 189
+P V + +
Sbjct: 200 DMLPGKVDRVMAI 212
>gi|256820781|ref|YP_003142060.1| nitrogen-fixing NifU domain-containing protein [Capnocytophaga
ochracea DSM 7271]
gi|256582364|gb|ACU93499.1| nitrogen-fixing NifU domain protein [Capnocytophaga ochracea DSM
7271]
Length = 299
Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 56/184 (30%), Positives = 96/184 (52%), Gaps = 5/184 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIF-SIPGIASVYFGYD 59
+ + TE TPNP+ +KF+ + LV I + + +E + +P+A +F P I V+F +
Sbjct: 105 ISVYTETTPNPSVMKFVANKR-LVPTIIEYKHIEETDEAPMAKALFTQFPFIEEVFFDDN 163
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+I+V K D +W + + I + G +I + + + + + V
Sbjct: 164 YISVTKKDNKEWAMVTSNIREFIKNYLSEGHILISSSEIKRHQQATQERLLSMVTTDEVS 223
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++I ++D V+PAVA DGG+I F Y V + ++GACSGCPS++ TLK G+ IL
Sbjct: 224 KQIIAIIDEFVKPAVASDGGNIQFISYNPETHYVEVILQGACSGCPSSTLTLKKGIEVIL 283
Query: 177 NHFV 180
+
Sbjct: 284 KDKL 287
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVG 64
+ T +P +K + LV+G+ + N EA+ SPLA +F +P + +VY +FI +
Sbjct: 8 VQPTSSPDIIKLEANKA-LVKGSYEYKNIDEAKNSPLAKELFYLPFVKTVYISSNFIALK 66
Query: 65 K-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES 113
+ +W+ ++ V ++ + SG I+ G + S
Sbjct: 67 RFPIIEWKDVQEEVAQQVLLYLQSGREIVSTEGEQKKVISVYTETTPNPS 116
>gi|71666135|ref|XP_820030.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70885357|gb|EAN98179.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 261
Score = 179 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 1 MFIQTEDTPNPATLKF-IPGQV----VLVEGAIHFSNAKEAEISPLASRIFSIPG--IAS 53
M + TPNP L F IP + ++ A + PL++ IF G +AS
Sbjct: 11 MQLHAAPTPNPLCLAFHIPSSTYDGFIPNGQTCEVAHRGLAWVHPLSNGIFEQYGQEVAS 70
Query: 54 VYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE 112
V+ +++ DW L + I + + + + + DD+ E
Sbjct: 71 VFIAPRHVSITVYPNVDWSTLEWSISSFIGHYLLFVNECVPAAKEYTLMEDDL---RIHE 127
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKY 170
DS V+Q IKE+L +VRP V RDGGD+ + G+V L+M GAC CPS+S TLK
Sbjct: 128 EDSEVLQCIKELLREQVRPMVQRDGGDVKLLNFNEETGVVSLAMLGACRTCPSSSNTLKD 187
Query: 171 GVANILNHFVPEVKDIRT 188
G+ ++ HF+PEV ++
Sbjct: 188 GIERVMKHFLPEVTEVVE 205
>gi|320584117|gb|EFW98328.1| hypothetical protein HPODL_0008 [Pichia angusta DL-1]
Length = 250
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 63/202 (31%), Positives = 108/202 (53%), Gaps = 18/202 (8%)
Query: 3 IQTEDTPNPATLKFIPGQ----VVLVEGAIHFSNAKEA-EISPLASRIFSIPGIASVYFG 57
++T TPN LKFI + A+ ++ EA + SPLAS +F + G+ S+ G
Sbjct: 26 LKTVGTPNENALKFISTDFNFLPESLTSAVEVNDLPEASQRSPLASELFKLNGVKSLLIG 85
Query: 58 YDFITVGKDQYD--------WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD 109
++FITV K + W+ L V+ +I S P+++ L ++ + +
Sbjct: 86 HNFITVNKVDPELSNNPDLHWDSLSTKVMNVITNAVDSNIPVLNPEYLDEIVRKQDEAQE 145
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASET 167
V IKE+++ R+RPA+ DGGDI F+ + G V+L ++GAC C + +T
Sbjct: 146 DD---DDVTYEIKELINTRIRPALQDDGGDIHFRSFDAESGTVYLKLQGACKSCSLSEDT 202
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
LK G+ ++L H++PEV++++ V
Sbjct: 203 LKNGIESMLKHYIPEVEEVKAV 224
>gi|8118105|gb|AAF72894.1|AF228511_2 NU1 [Trypanosoma cruzi]
Length = 261
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 1 MFIQTEDTPNPATLKF-IPGQV----VLVEGAIHFSNAKEAEISPLASRIFSIPG--IAS 53
M + TPNP L F IP + ++ A + PL++ IF G +AS
Sbjct: 11 MQLHAAPTPNPLCLAFHIPSSTYDGFIPNGQTCEVAHRGLAWVHPLSNGIFEQYGQEVAS 70
Query: 54 VYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE 112
V+ +++ +W L + I + + + + + DD+ E
Sbjct: 71 VFIAPRHVSITVYPNVEWSKLEWSISSFIGHYLLFVNECVPAAKEYTLMEDDL---RIHE 127
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKY 170
DS V+Q IKE+L +VRP V RDGGD+ + G+V L+M GAC CPS+S TLK
Sbjct: 128 EDSEVLQCIKELLREQVRPMVQRDGGDVKLLNFNEETGVVSLAMLGACRTCPSSSNTLKD 187
Query: 171 GVANILNHFVPEVKDIRT 188
G+ ++ HF+PEV ++
Sbjct: 188 GIERVMKHFLPEVTEVVE 205
>gi|313206892|ref|YP_004046069.1| nitrogen-fixing nifu domain protein [Riemerella anatipestifer DSM
15868]
gi|312446208|gb|ADQ82563.1| nitrogen-fixing NifU domain protein [Riemerella anatipestifer DSM
15868]
Length = 292
Score = 178 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 9/192 (4%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFS-IPGIASVYFGYDFI 61
I E TPNP+ +KF+ + +L+EG + + +EA PLA IF V+ +F+
Sbjct: 103 IYAEMTPNPSVMKFVASR-LLLEGFVEVKSREEAAEVPLAQAIFKEFDFAQEVFISDNFV 161
Query: 62 TVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
V KD W + I E+ +G + H K ++ + Q+
Sbjct: 162 AVTKDDSVQWHEVMVVTRAFIAEYLQNGGEVSHKEP---QKHENPVEKIINREYTDTEQK 218
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANILNH 178
I ++L+ V PAV DGG I Y + + ++GACSGCPS++ TLK G+ N+L
Sbjct: 219 ISDILNEYVAPAVENDGGKISLMEYDESTKTAKMLLQGACSGCPSSTATLKGGIENVLKQ 278
Query: 179 FVPE-VKDIRTV 189
F+P+ V+ + V
Sbjct: 279 FLPDLVEKVEAV 290
Score = 67.5 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E T NP +KF+ L+ G++ + PLA +F+ P + ++ +FI
Sbjct: 4 IIIEATENPRVMKFVADYN-LIPGSLELDRNSDISEIPLAQELFNYPFVDKIFITANFIA 62
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISG 88
V K D +WEH+ + +I + ++
Sbjct: 63 VAKQDTVEWEHVVQSLKNVIEDELLAN 89
>gi|326334857|ref|ZP_08201058.1| nitrogen-fixing NifU domain protein [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325692894|gb|EGD34832.1| nitrogen-fixing NifU domain protein [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 295
Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 9/180 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E TPNP +KF+ + LV + +A+EA SPLA+ +F P + V+F ++I+
Sbjct: 110 IYVESTPNPMAMKFVANKK-LVSRVYEYKSAQEAAESPLAAALFKFPYVKEVFFDSNYIS 168
Query: 63 V-GKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V + + WE + + I ++ ++G P++ + + + + I S ++I
Sbjct: 169 VIRQPKILWEEVMMELREFIRQYLMAGKPVVRVIVEDGDRPKGLPTLNDIYS-----RKI 223
Query: 122 KEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+LD ++PAV+ DGG+I F Y +V + M+GAC+GCPS+ TLK G+ IL
Sbjct: 224 IAILDQYIKPAVSSDGGNIQFVSYDKESQVVKVLMQGACNGCPSSKLTLKQGIEAILREK 283
Score = 65.6 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M + + T NPA +K + V+LV+G+ F+ ++AE SPLA + +IP I +V+ +F
Sbjct: 1 MRLDIQRTTNPAIIK-LEAPVILVKGSYQFTTEEQAENSPLAKELLAIPFIKTVFISANF 59
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDM 100
I + +W+ + V + + G PI+ + +
Sbjct: 60 IALEALPIVEWDDVAQEVALQVEAYLRRGAPILIDNIPEEA 100
>gi|90076830|dbj|BAE88095.1| unnamed protein product [Macaca fascicularis]
Length = 199
Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats.
Identities = 57/132 (43%), Positives = 74/132 (56%), Gaps = 10/132 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT++TPNP +LKFIPG+ VL + F A SPLA ++F I G+ SV+FG DF
Sbjct: 59 MFIQTQNTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 118
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K + DW L+P + IM+ F SG P++ E D VV
Sbjct: 119 ITVTKENEDLDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAG--------SEEDDEVV 170
Query: 119 QRIKEVLDNRVR 130
IKE+LD R+R
Sbjct: 171 AMIKELLDTRIR 182
>gi|213962175|ref|ZP_03390439.1| nitrogen-fixing NifU domain protein [Capnocytophaga sputigena
Capno]
gi|213955181|gb|EEB66499.1| nitrogen-fixing NifU domain protein [Capnocytophaga sputigena
Capno]
Length = 300
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 56/184 (30%), Positives = 99/184 (53%), Gaps = 5/184 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIF-SIPGIASVYFGYD 59
+ + TE TPNP +KF+ + LV I + + +EA +P+A+ + P I V+F +
Sbjct: 107 ITVYTETTPNPTVMKFVANKR-LVPTVIEYKSIEEATEAPMAATLLTRFPFIEEVFFDDN 165
Query: 60 FITVGKDQYD-WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+I++ K + WE + + I ++ G PII+ + + + + + +
Sbjct: 166 YISLTKKGMEEWEMIAADLRDYIRKYLSEGRPIINPSEIKRRQEEAQARLLSMVTTDEIS 225
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANIL 176
Q+I +++ V+PAVA DGG+I F Y V + ++GACSGCPS+++TLK G+ IL
Sbjct: 226 QQIVAIIEQYVKPAVASDGGNIQFISYNRDTHHVEVLLQGACSGCPSSTQTLKKGIEVIL 285
Query: 177 NHFV 180
+
Sbjct: 286 KDKL 289
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 65/148 (43%), Gaps = 12/148 (8%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ + T NP +K + LV+G+ F N EA+ +PLA +F +P + +VY +FI
Sbjct: 6 LKIQPTANPDIIKLEANRP-LVKGSYEFKNIDEAKNAPLAKELFYLPFVKTVYISSNFIA 64
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
+ + +W+ ++ V ++ + SG I+ M + + + +
Sbjct: 65 LKRFPIVEWKEVQEEVAQQVLVYLQSGKDILLGEARKPMGEAITVYTETTPNPTVM---- 120
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGI 149
K V + R+ P V I +K +
Sbjct: 121 KFVANKRLVPTV------IEYKSIEEAT 142
>gi|315023968|gb|EFT36970.1| nifU related protein [Riemerella anatipestifer RA-YM]
gi|325335671|gb|ADZ11945.1| Thioredoxin-like protein [Riemerella anatipestifer RA-GD]
Length = 292
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 58/192 (30%), Positives = 93/192 (48%), Gaps = 9/192 (4%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFS-IPGIASVYFGYDFI 61
I E TPNP+ +KF+ + +L++G + + +EA PLA IF V+ +F+
Sbjct: 103 IYAEMTPNPSVMKFVASR-LLLDGFVEVKSREEAAEVPLAQAIFKEFSFAQEVFISDNFV 161
Query: 62 TVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
V KD W + I E+ +G + K ++ + Q+
Sbjct: 162 AVTKDDSVQWHEVMVVTRAFIAEYLQNGGEVSQKEP---QKHENPVEKIINREYTYTEQK 218
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANILNH 178
I +VL+ V PAV DGG I Y + + ++GACSGCPS++ TLK G+ N+L
Sbjct: 219 ISDVLNEYVAPAVENDGGKISLMEYDESTKTAKMLLQGACSGCPSSTATLKGGIENVLKQ 278
Query: 179 FVPE-VKDIRTV 189
F+P+ V+ + V
Sbjct: 279 FLPDLVEKVEAV 290
Score = 67.9 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E T NP +KF+ L+ G++ + PLA +F+ P + ++ +FI
Sbjct: 4 IIIEATENPRVMKFVADYN-LIPGSLELDRNSDISEIPLAQELFNYPFVDKIFITANFIA 62
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISG 88
V K D +WEH+ + +I + ++
Sbjct: 63 VAKQDTVEWEHVVQSLKNVIEDELLAN 89
>gi|297266190|ref|XP_001096379.2| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Macaca mulatta]
Length = 196
Score = 174 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 63/186 (33%), Positives = 90/186 (48%), Gaps = 36/186 (19%)
Query: 10 NPATLKFIP----GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
NP T+K P Q L F N +ISPL + I G+ SV+FG DFITV K
Sbjct: 28 NPYTIKKQPLHQFVQRPLFPLPAAFCNP--GKISPLLKQ---IEGVKSVFFGPDFITVTK 82
Query: 66 D--QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKE 123
+ DW L+P + IM+ F SG P++
Sbjct: 83 ENEDLDWNLLKPDIYATIMDFFASGLPLVTEETPSGEA---------------------- 120
Query: 124 VLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEV 183
+ P V DGGD+++KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L ++PEV
Sbjct: 121 ---GNMLPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPEV 177
Query: 184 KDIRTV 189
+ + V
Sbjct: 178 EGVEQV 183
>gi|261332565|emb|CBH15560.1| HIRA-interacting protein 5, putative [Trypanosoma brucei gambiense
DAL972]
Length = 261
Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats.
Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 1 MFIQTEDTPNPATLKF-IPGQV----VLVEGAIHFSNAKEAEISPLASRIFSI--PGIAS 53
M + + TPNP+ F IP + ++ A + PL+ IF +AS
Sbjct: 11 MQLHSLPTPNPSCYTFHIPSSTYDNFIPDGQTCDVAHMSLAWVHPLSQGIFEQYPQEVAS 70
Query: 54 VYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE 112
V+ ++ DW L + I + + + + DD+ E
Sbjct: 71 VFIAPRHTSITVHPHVDWNKLEWSISSFIGHYLVFTNACFPAAAEYALLEDDLV---IHE 127
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKY 170
DS V+Q IKE++ +VRP V RDGGD+ + + G+V L+M GAC CPS+ TLK
Sbjct: 128 DDSEVLQCIKELVRGQVRPMVQRDGGDVKLLNFNEKTGVVSLAMLGACRTCPSSQNTLKD 187
Query: 171 GVANILNHFVPEVKDIRT 188
GV +L HF+PEVK++
Sbjct: 188 GVERLLKHFLPEVKEVVE 205
>gi|255534458|ref|YP_003094829.1| nifU related protein [Flavobacteriaceae bacterium 3519-10]
gi|255340654|gb|ACU06767.1| nifU related protein [Flavobacteriaceae bacterium 3519-10]
Length = 292
Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 9/193 (4%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFS-IPGIASVYFGYDF 60
I +E TPNP +KF+ +L +G + + EA PLA IF ++ +F
Sbjct: 102 LIYSEMTPNPMVMKFVSSTELL-DGFVEVKSPAEAGEVPLAKAIFDEFGFAKEIFISGNF 160
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+ V K+ +W + + I + +G I + + K + +A Q
Sbjct: 161 VAVTKNVSVEWHEVMITMRDFIANYLQNGGAISN---IATQKHETPVESSIQRDYTANEQ 217
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILN 177
+I ++LD V PAVA DGG I Y + + ++GACSGCPS++ TLK G+ NIL
Sbjct: 218 KISDILDEYVAPAVAGDGGKISLIEYDEASKTAKMLLQGACSGCPSSTATLKGGIENILK 277
Query: 178 HFVPE-VKDIRTV 189
FVPE V+++ V
Sbjct: 278 QFVPELVENVEAV 290
Score = 67.9 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E T NP LKF+ +L G++ + PLA ++ + P + ++ +FI
Sbjct: 4 ILIEATENPKVLKFVADYNLLP-GSLELDRQSDISEIPLAQKLLNFPFVDRIFITANFIA 62
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISG 88
V K D +WE + + +I + I+
Sbjct: 63 VAKQDTVEWEFVADSLKNVIEDELIAN 89
>gi|323332794|gb|EGA74199.1| Nfu1p [Saccharomyces cerevisiae AWRI796]
Length = 224
Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats.
Identities = 61/194 (31%), Positives = 105/194 (54%), Gaps = 17/194 (8%)
Query: 13 TLKFIP--GQVVLVEGAIHF--SNAKE--AEISPLASRIF-SIPGIASVYFGYDFITVGK 65
LKF+ G+++ G+ N E S LA +IF PG+ S+ G DF+T+ K
Sbjct: 2 ALKFLSTDGEMLQTRGSKSIVIKNTDENLINHSKLAQQIFLQCPGVESLMIGDDFLTINK 61
Query: 66 D-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD-------DMGSGDFIESDSAV 117
D W ++P ++ ++ + G+ +I + + +M + E D V
Sbjct: 62 DRMVHWNSIKPEIIDLLTKQLACGEDVISKEFHAVQEEEGEGGYKINMPKFELTEEDEEV 121
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANI 175
+ I+E++D R+RPA+ DGGDI ++G+ G V+L ++GAC+ C S+ TLKYG+ ++
Sbjct: 122 SELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCSSSEVTLKYGIESM 181
Query: 176 LNHFVPEVKDIRTV 189
L H+V EVK++ +
Sbjct: 182 LKHYVDEVKEVIQI 195
>gi|71747438|ref|XP_822774.1| HIRA-interacting protein 5 [Trypanosoma brucei TREU927]
gi|70832442|gb|EAN77946.1| HIRA-interacting protein 5, putative [Trypanosoma brucei]
Length = 261
Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats.
Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 13/198 (6%)
Query: 1 MFIQTEDTPNPATLKF-IPGQV----VLVEGAIHFSNAKEAEISPLASRIFSI--PGIAS 53
M + + TPNP+ F IP + ++ A + PL+ IF +AS
Sbjct: 11 MQLHSLPTPNPSCYTFHIPSSTYDNFIPDGQTCDVAHMGLAWVHPLSQGIFEQYPQEVAS 70
Query: 54 VYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE 112
V+ ++ DW L + I + + + + DD+ E
Sbjct: 71 VFIAPRHTSITVHPHVDWNKLEWSISSFIGHYLVFTNACFPAAAEYALLEDDLV---IHE 127
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKY 170
DS V+Q IKE++ +VRP V RDGGD+ + + G+V L+M GAC CPS+ TLK
Sbjct: 128 DDSEVLQCIKELVREQVRPMVQRDGGDVKLLNFNEKTGVVSLAMLGACRTCPSSQNTLKD 187
Query: 171 GVANILNHFVPEVKDIRT 188
GV +L HF+PEVK++
Sbjct: 188 GVERLLKHFLPEVKEVVE 205
>gi|316971797|gb|EFV55531.1| putative HECT-domain protein [Trichinella spiralis]
Length = 626
Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 63/149 (42%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M+IQ +TPNP +LKF+PG VL F N AE SPLA IF I G+ SV+FG DF
Sbjct: 1 MYIQVMETPNPHSLKFLPGIPVLPGRTAEFPNRPSAENSPLARAIFRIKGVKSVFFGEDF 60
Query: 61 ITVGKDQY--DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
ITV K+ DW ++P + IM+ F S II +DD D + D+ V
Sbjct: 61 ITVTKNSEVKDWVTMKPEIFSTIMDFFTSKQDII---------IDDSTEKDAADDDNDTV 111
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD 147
IK++L+ R+RP V DGGD+VF +
Sbjct: 112 AMIKDLLNTRIRPTVQDDGGDVVFMVVDE 140
>gi|30249416|ref|NP_841486.1| nitrogen-fixing protein NifU [Nitrosomonas europaea ATCC 19718]
gi|30138779|emb|CAD85356.1| Nitrogen-fixing protein NifU [Nitrosomonas europaea ATCC 19718]
Length = 186
Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 6/184 (3%)
Query: 4 QTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITV 63
+ E TPNP LKF+ + + A + +A++A PLA+ +F I + +V++ +IT+
Sbjct: 6 EIEGTPNPNALKFVLKEPLTWGVAKSYDHAEQAVDDPLAAALFDIDHVTNVFYVDRWITI 65
Query: 64 GKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIK 122
+D DW+ L V I P + + D E D ++RI
Sbjct: 66 TQDGGADWQDLAREVADPIRA-----APAATDQSAAVVAAASRTLADLSEEDQQRLERIN 120
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
+LD VRP + DGGD+ I+ + +GAC CPS+ G+ +L P+
Sbjct: 121 ILLDEEVRPFLQHDGGDLHVLALEGNILRIHYQGACGTCPSSISGTLRGIEQLLRTIEPD 180
Query: 183 VKDI 186
++ +
Sbjct: 181 IRVV 184
>gi|262277769|ref|ZP_06055562.1| NifU domain protein [alpha proteobacterium HIMB114]
gi|262224872|gb|EEY75331.1| NifU domain protein [alpha proteobacterium HIMB114]
Length = 179
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 60/188 (31%), Positives = 102/188 (54%), Gaps = 15/188 (7%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
I DTPNP T KF+ Q ++ G+ F + ++ I L + +F I + VY +FI
Sbjct: 1 MINVVDTPNPDTKKFVFDQTIVKIGSKEFKKSDQSNID-LVNDLFLIKELELVYLDKNFI 59
Query: 62 TVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
++ K+ W+ + +L + + D + + E + +R
Sbjct: 60 SIKKNKDSSWDDIVQDILEALNKRISQN-------------FDALSFEEESEFTDDISKR 106
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I+EVL++++RPAVA DGGDI K ++DG+ + ++GAC+GCPS++ TLK+GV ++ H+V
Sbjct: 107 IEEVLNDKIRPAVAMDGGDIRLKSFKDGVAEVMLKGACAGCPSSTVTLKHGVERMIKHYV 166
Query: 181 PEVKDIRT 188
PEV +
Sbjct: 167 PEVTSVEA 174
>gi|322490669|emb|CBZ25931.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 301
Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats.
Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 13/196 (6%)
Query: 1 MFIQTEDTPNPATLKF-IPG---QVVLVEG-AIHFSNAKEAEISPLASRIFSI--PGIAS 53
M + + TPNP F IP + + +G + ++ A + PL+ +F + S
Sbjct: 52 MQLHAQPTPNPLCHSFTIPADSFESFVPQGQSCEVAHRGLAWVHPLSQGLFEQYSQEVMS 111
Query: 54 VYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE 112
V+ +++ +W + + + + I + I + DD+ + +
Sbjct: 112 VFIAPRHVSISVYTNVEWSKIEWSISSFLGHYLIFNNTCISPAKEYTLIEDDL---ELKD 168
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKY 170
+DS V+Q IKE+L +VRP V RDGGD+ + + G+V L+M GAC CPS+ TLK
Sbjct: 169 TDSEVLQCIKELLREQVRPMVQRDGGDVKLLNFNEKTGVVSLAMLGACKTCPSSQNTLKD 228
Query: 171 GVANILNHFVPEVKDI 186
G+ ++ HF+PEV ++
Sbjct: 229 GIERVMKHFLPEVTEV 244
>gi|325982994|ref|YP_004295396.1| Scaffold protein Nfu/NifU [Nitrosomonas sp. AL212]
gi|325532513|gb|ADZ27234.1| Scaffold protein Nfu/NifU [Nitrosomonas sp. AL212]
Length = 186
Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 6/183 (3%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVG 64
E TPN LKFI + + A F NA+ A PLAS +F I + +V++ +ITV
Sbjct: 7 IEGTPNKNALKFILKEPLTWGVARSFDNAEAARDDPLASALFDIDHVTNVFYIDHWITVT 66
Query: 65 KD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKE 123
+D + +W+ L + I + L ++ D +++I
Sbjct: 67 QDGEANWQDLARDIADPIRAAPAASAQSAETVATASQALANLN-----PEDQLRLEKINI 121
Query: 124 VLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEV 183
+LD VRP + DGGD+ G I+ + +GAC CPS+ G+ N+L P++
Sbjct: 122 LLDEEVRPYLQSDGGDLHILGLEGNILHIHYQGACGTCPSSISGTLRGIENMLRTLEPDI 181
Query: 184 KDI 186
+ +
Sbjct: 182 QVV 184
>gi|154345572|ref|XP_001568723.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134066065|emb|CAM43852.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 260
Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 13/196 (6%)
Query: 1 MFIQTEDTPNPATLKF-IPG---QVVLVEG-AIHFSNAKEAEISPLASRIFSI--PGIAS 53
M + + TPNP F IP + + +G + ++ A + PL+ +F +
Sbjct: 11 MQLHAQPTPNPLCHSFSIPADSFESFVPQGQSCEVAHRGLAWVHPLSQGLFEQYPQEVMC 70
Query: 54 VYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE 112
V+ +++ DW + + + + I + + + DD+ + +
Sbjct: 71 VFIAPRHVSISVYTNVDWSKIEWSISSFLGHYLIFNNACVSPAKEYTLIEDDL---ELKD 127
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKY 170
+DS V+Q IKE+L +VRP V RDGGD+ + + G+V L+M GAC CPS+ TLK
Sbjct: 128 NDSEVLQCIKELLREQVRPMVQRDGGDVKLLNFNEKTGVVSLAMLGACRTCPSSQNTLKD 187
Query: 171 GVANILNHFVPEVKDI 186
G+ ++ HF+PEV ++
Sbjct: 188 GIERVMKHFLPEVTEV 203
>gi|330813331|ref|YP_004357570.1| hypothetical protein SAR11G3_00356 [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486426|gb|AEA80831.1| hypothetical protein SAR11G3_00356 [Candidatus Pelagibacter sp.
IMCC9063]
Length = 179
Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 58/184 (31%), Positives = 99/184 (53%), Gaps = 14/184 (7%)
Query: 7 DTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK- 65
DTPNP + KF+ ++ G+ + ++ + A ++F +Y +F+T+ K
Sbjct: 6 DTPNPESKKFVFDFDIVKSGSKEIKSIEDCKEIKFAEKLFDQVSPELIYIDSNFVTIKKK 65
Query: 66 DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVL 125
DW ++ +L ++ E + + + E + QRI+EVL
Sbjct: 66 SSQDWNEIKENILKILSE-------------EVNADFEALSFEKSFEFKDEISQRIEEVL 112
Query: 126 DNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
++++RPAVA DGGDI K Y+DGIV + ++G+C+GCPS++ TLK GV ++ H+VPEV
Sbjct: 113 NDKIRPAVAMDGGDIQLKSYKDGIVEVMLKGSCAGCPSSTVTLKQGVERMIKHYVPEVNS 172
Query: 186 IRTV 189
+ V
Sbjct: 173 VIAV 176
>gi|294936237|ref|XP_002781672.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
gi|239892594|gb|EER13467.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
Length = 262
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 62/195 (31%), Positives = 106/195 (54%), Gaps = 11/195 (5%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEGAIHFS-NAKEAEISPLASRIFSIPGIASVYFG 57
+ + E TPNP+ + F G+ +L +GA S + SPLA+ +F I G+ V
Sbjct: 29 IAVSAEATPNPSAMIFTLEGGKPILGKGAKSMSFEKTQCGGSPLAASLFRIHGVDKVLLA 88
Query: 58 YDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
TV K + +WE L+P V +I + F I + + ++ G +D
Sbjct: 89 ARHATVTKSPETEWEMLKPNVELVISQFFD----IPNVKPVAPDTIEYTQEGQDQHNDD- 143
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVAN 174
VV+ I E+L+ R++P V RDGGD+ F + G++ + + G+C+GCP +S TLK+G+
Sbjct: 144 VVKSIHEILEQRIKPFVERDGGDVEFIAFDSDTGVLQIRLVGSCAGCPKSSVTLKFGIQR 203
Query: 175 ILNHFVPEVKDIRTV 189
++ H++PEVK++ +
Sbjct: 204 MVCHYIPEVKNVINI 218
>gi|301166538|emb|CBW26114.1| putative nitrogen fixation-related protein [Bacteriovorax marinus
SJ]
Length = 184
Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
M IQ + TPNP LKFI + V EG + + + + LA +F++ G+ ++F +
Sbjct: 1 MDIQIQPTPNPNALKFILDKPVKNEGNSSYKSPMDCGDNNLALTLFTVRGVDQLHFYDNV 60
Query: 61 ITVGKDQY-DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
IT+ K Y DWE + P ++ I + DP D + + S ++
Sbjct: 61 ITITKFGYEDWESMEPTIMDYINSEYPKHDP---------NYFDPDPEAERRANLSPELK 111
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN-H 178
I+ +LD +RP + DGGDI + D I+ + +GAC CPS++ + IL
Sbjct: 112 EIEAILDKTIRPGLQGDGGDIQTISFEDNILLVQYQGACGTCPSSTTGTLEAIKAILRDE 171
Query: 179 FVPEV 183
+ P++
Sbjct: 172 YNPDI 176
>gi|157876630|ref|XP_001686660.1| hypothetical protein [Leishmania major strain Friedlin]
gi|68129735|emb|CAJ09041.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 311
Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 13/196 (6%)
Query: 1 MFIQTEDTPNPATLKF-IPG---QVVLVEG-AIHFSNAKEAEISPLASRIFSI--PGIAS 53
M + TPNP F IP + + +G + ++ A + PL+ +F + S
Sbjct: 62 MQLHALPTPNPLCHTFTIPADSFESFVPQGQSCEVAHRGLAWVHPLSQGLFEQYPQELMS 121
Query: 54 VYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE 112
V+ +++ DW + + + + I + I + DD+ + +
Sbjct: 122 VFIAPRHVSISVYTNVDWSKIEWSISSFLGHYLIFTNACISPAKEYTLMEDDL---ELKD 178
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKY 170
+D+ V+Q IKE+L +VRP V RDGGD+ + + GIV L+M GAC CPS+ TLK
Sbjct: 179 TDTEVLQCIKELLREQVRPMVQRDGGDVKLLNFNEKTGIVSLAMLGACKTCPSSQNTLKD 238
Query: 171 GVANILNHFVPEVKDI 186
G+ ++ HFVPEV ++
Sbjct: 239 GIERVMKHFVPEVTEV 254
>gi|327289878|ref|XP_003229651.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like, partial [Anolis carolinensis]
Length = 129
Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats.
Identities = 53/131 (40%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQT+DTPNP +LKFIPG+ VL + F++ SPLA ++F I G+ SV+FG DF
Sbjct: 6 MFIQTQDTPNPNSLKFIPGKPVLESRTMEFTSPASTYCSPLARQLFRIEGVKSVFFGADF 65
Query: 61 ITVGK--DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+TV K + DW ++P + IM+ + SG P++ + E D VV
Sbjct: 66 VTVTKESEDVDWNLIKPDIYATIMDFYASGLPVVTDEAP-------RPETAPSEEDDEVV 118
Query: 119 QRIKEVLDNRV 129
IKE+LD R+
Sbjct: 119 SMIKELLDTRI 129
>gi|82701834|ref|YP_411400.1| nitrogen-fixing NifU-like [Nitrosospira multiformis ATCC 25196]
gi|82409899|gb|ABB74008.1| Nitrogen-fixing NifU-like protein [Nitrosospira multiformis ATCC
25196]
Length = 186
Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 7/188 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TPN LKFI + + + NA++A+ PLA +F I + +V++ +IT
Sbjct: 5 VEIEGTPNRNALKFILKEPLTWGVTRSYDNAEQAKGDPLAEALFDIDHVTNVFYVDRWIT 64
Query: 63 VGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V +D DW+ L V I + + D + I
Sbjct: 65 VTQDGAADWQDLAREVADPIRAAPA-----ADAQTAATIAAAGAEIANLSPEDQQRLNLI 119
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
E+LD +RP + DGGD+ G + + +GAC CPS+ G+ N+L P
Sbjct: 120 NEMLDEEIRPYLQSDGGDLHVLGLEGNRLSVHYQGACGTCPSSITGTLRGIQNMLRSIEP 179
Query: 182 EVKDIRTV 189
++ ++ V
Sbjct: 180 DL-EVVAV 186
>gi|322503448|emb|CBZ38533.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 299
Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 13/196 (6%)
Query: 1 MFIQTEDTPNPATLKF-IPG---QVVLVEG-AIHFSNAKEAEISPLASRIFSI--PGIAS 53
M + + TPNP F IP + + +G + ++ A + PL+ +F + S
Sbjct: 50 MQLHAQRTPNPLCHSFTIPADSFESFVPQGQSCEVAHRGLAWVHPLSQGLFEQYPQELMS 109
Query: 54 VYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE 112
V+ +++ DW + + + + I + I + DD+ + +
Sbjct: 110 VFIAPRHVSISVYTNVDWSKIEWSISSFLGHYLIFTNACISPAKEYTLIEDDL---ELKD 166
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKY 170
+DS V+Q IKE+L +VRP V RDGGD+ + + GIV L+M GAC CPS+ TLK
Sbjct: 167 TDSEVLQCIKELLREQVRPMVQRDGGDVKLLNFNEKTGIVSLAMLGACKTCPSSQNTLKD 226
Query: 171 GVANILNHFVPEVKDI 186
G+ ++ HF+PEV ++
Sbjct: 227 GIERVMKHFLPEVTEV 242
>gi|146103241|ref|XP_001469515.1| hypothetical protein [Leishmania infantum]
gi|134073885|emb|CAM72624.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 299
Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 13/196 (6%)
Query: 1 MFIQTEDTPNPATLKF-IPG---QVVLVEG-AIHFSNAKEAEISPLASRIFSI--PGIAS 53
M + + TPNP F IP + + +G + ++ A + PL+ +F + S
Sbjct: 50 MQLHAQRTPNPLCHSFTIPADSFESFVPQGQSCEVAHRGLAWVHPLSQGLFEQYPQELMS 109
Query: 54 VYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE 112
V+ +++ DW + + + + I + I + DD+ + +
Sbjct: 110 VFIAPRHVSISVYTNVDWSKIEWSISSFLGHYLIFTNACISPAKEYTLIEDDL---ELKD 166
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKY 170
SDS V+Q IKE+L +VRP V RDGGD+ + + GIV L+M GAC CPS+ TLK
Sbjct: 167 SDSEVLQCIKELLREQVRPMVQRDGGDVKLLNFNEKTGIVSLAMLGACKTCPSSQNTLKD 226
Query: 171 GVANILNHFVPEVKDI 186
G+ ++ HF+PEV ++
Sbjct: 227 GIERVMKHFLPEVTEV 242
>gi|50292835|ref|XP_448850.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528163|emb|CAG61820.1| unnamed protein product [Candida glabrata]
Length = 263
Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 67/204 (32%), Positives = 111/204 (54%), Gaps = 16/204 (7%)
Query: 1 MFIQTEDTPNPATLKFIP--GQVVLVEGAIHF----SNAKEAEISPLASRIF-SIPGIAS 53
+ IQT TPN LKF+ +++ G+ ++ S LAS+IF PG+ S
Sbjct: 24 ITIQTLTTPNENALKFLNKDNELLQTRGSKSIVIKNTDQNLISHSDLASKIFAQCPGVES 83
Query: 54 VYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMG------ 106
+ G DF+TV KD W ++ V+ ++ + SG +I + + ++ G
Sbjct: 84 LMIGDDFLTVNKDSQVPWAQIQSDVIDLLTQQLASGKNVISDEFHAIKEDNEAGYQINEM 143
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSA 164
D E D + + I+E+++ R+RPA+ DGGDI F+G+ G V+L ++GAC+ C S+
Sbjct: 144 KFDLTEEDEEIKELIEELIETRIRPAILEDGGDIDFRGWDPESGTVYLKLQGACTSCSSS 203
Query: 165 SETLKYGVANILNHFVPEVKDIRT 188
TLKYG+ ++L H+V EVK++
Sbjct: 204 EVTLKYGIESMLKHYVDEVKEVIQ 227
>gi|149912092|ref|ZP_01900681.1| hypothetical protein PE36_11562 [Moritella sp. PE36]
gi|149804829|gb|EDM64868.1| hypothetical protein PE36_11562 [Moritella sp. PE36]
Length = 215
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 6/190 (3%)
Query: 1 MFIQTEDT-PNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+ I+ E + +P T KFI + + G F+N + A SPL ++F++PG+A+V
Sbjct: 11 ISIRAETSIADPDTCKFIVSRTLHPGGPFFFANKERAAGSPLGEQLFALPGVANVLIAES 70
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+T+ K+ W L+ + I ++G P I + D +G SD+ ++
Sbjct: 71 IVTICKEPTASWSGLKAAIGTAIRAQLLTGVPAILEMYI----HTDTQTGMQRRSDAELI 126
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
I+ +LD + ++A GG I R G +++SM G C GC SA TL+ G +L
Sbjct: 127 TVIQGLLDKEINRSIANHGGKISIVEIRQGKLYISMSGGCQGCASAQVTLRQGFEVMLKR 186
Query: 179 FVPEVKDIRT 188
PE+++I
Sbjct: 187 VAPEIEEIVD 196
>gi|126668356|ref|ZP_01739314.1| hypothetical protein MELB17_13022 [Marinobacter sp. ELB17]
gi|126627172|gb|EAZ97811.1| hypothetical protein MELB17_13022 [Marinobacter sp. ELB17]
Length = 211
Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 10/189 (5%)
Query: 3 IQTEDT-PNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
I+ E + +P T KFI + + G F N + A SPL ++F++PG+A++ +
Sbjct: 13 IRAESSLADPDTCKFIVSRTLHPGGPFFFGNKERAVGSPLGEQLFALPGVANLLIADSVV 72
Query: 62 TVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
TV K+ W L+ + I SG P I + + ++D+ +
Sbjct: 73 TVCKEPAASWSGLKAGIGMAIRTQLRSGVPAILEMPAHNRRQ--------GKTDAELTTA 124
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
++E+LD V ++A GG I G R G + ++M G C GC S+ TL+ G +L
Sbjct: 125 VQELLDKEVNRSIANHGGKISIVGVRQGKLSITMSGGCQGCASSQVTLRQGFEVMLKRVA 184
Query: 181 PEVKDIRTV 189
PE+++I V
Sbjct: 185 PEIEEIIDV 193
>gi|325115956|emb|CBZ51510.1| Nitrogen-fixing NifU, C-terminal, related [Neospora caninum
Liverpool]
Length = 191
Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 92/177 (51%), Gaps = 9/177 (5%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKD-QYDWEHLRPPVLG 79
L G I + + SPLA +F I G +SV D++TV K DW L PV
Sbjct: 2 PYLKRGMIDVLSVRAEGASPLADCLFKIDGTSSVLIAGDYVTVVKAKDTDWGDLEEPVKR 61
Query: 80 MIMEHFISGDPII------HNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAV 133
I++H +SG P I + + + + + + + + I+E+L R RP +
Sbjct: 62 SILDHLMSGLPAIQPVASSEEISVPEGRRQEPQQQSKPDEEEDLSEAIRELLHMRARPML 121
Query: 134 ARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
DGGD+ + + GIV++ ++G+C GCPS+ T+K G+ +L +++PEV+D+R
Sbjct: 122 QADGGDLEMMRFDEETGIVWVHLKGSCEGCPSSLITVKRGMKQMLQYYIPEVEDVRQ 178
>gi|42521822|ref|NP_967202.1| putative nitrogen-fixing protein NifU [Bdellovibrio bacteriovorus
HD100]
gi|39574352|emb|CAE77856.1| putative nitrogen-fixing protein NifU [Bdellovibrio bacteriovorus
HD100]
Length = 186
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 11/188 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+ I+ + TPNP KF+ + VL +G +++AKEAE S LAS +F + G+ V+F +
Sbjct: 6 VLIRIQATPNPNAWKFVLDRAVLNDGKATYADAKEAEQSILASSLFQVEGVRQVHFFQNV 65
Query: 61 ITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
IT+ + D E ++ V +I + +P + ++ + VQ
Sbjct: 66 ITITHNFDADPEEIQRNVCSVIQTRMPAHNPAVTQMDEKKLRRASLPPE---------VQ 116
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN-H 178
+I+E+LD VRP + DGGD+ Y D +++ +GAC CPSA+ + IL
Sbjct: 117 QIEEILDQTVRPGLQGDGGDLDVVKYEDNKLYVFYQGACGTCPSATSGTLMAIEGILRDQ 176
Query: 179 FVPEVKDI 186
F P ++ I
Sbjct: 177 FNPTIEVI 184
>gi|114331232|ref|YP_747454.1| NifU domain-containing protein [Nitrosomonas eutropha C91]
gi|114308246|gb|ABI59489.1| nitrogen-fixing NifU domain protein [Nitrosomonas eutropha C91]
Length = 186
Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 6/184 (3%)
Query: 4 QTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITV 63
+ E TPNP LKFI + + ++NA++A PLA+ +F I + +V++ +IT+
Sbjct: 6 EIEGTPNPNALKFILKEPLTWGVTKSYNNAEQAADDPLAAALFDIDHVINVFYVDRWITI 65
Query: 64 GKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIK 122
+D DW+ L V I P + + + E D ++RI
Sbjct: 66 TQDGGADWQDLAREVADPIRA-----APAATDQSATVVAAASEALANLSEEDQQRLERIN 120
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
+L+ VRP + DGGD+ ++ + +GAC CPS+ G+ +L P+
Sbjct: 121 ILLEEEVRPYLQHDGGDLHVLALEGSLLRIHYQGACGTCPSSISGTLRGIEQLLRTIEPD 180
Query: 183 VKDI 186
++ +
Sbjct: 181 IRVV 184
>gi|218659803|ref|ZP_03515733.1| Scaffold protein Nfu/NifU [Rhizobium etli IE4771]
Length = 107
Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 57/97 (58%), Positives = 76/97 (78%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPAT KF+PG+VV+ G F +A+EA+ SPLA+R+F IPG+ VYFGYDF
Sbjct: 9 MFIQTEATPNPATQKFLPGKVVMENGTAEFRSAEEAQASPLAARLFEIPGVTGVYFGYDF 68
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGL 97
I+V KD +W+HL+P +LG IMEHF+SG P++ + +
Sbjct: 69 ISVSKDDVEWQHLKPAILGSIMEHFMSGKPVMGDASI 105
>gi|218516514|ref|ZP_03513354.1| nitrogen fixation protein [Rhizobium etli 8C-3]
Length = 99
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 57/92 (61%), Positives = 73/92 (79%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPNPAT KF+PG+VV+ G F +A EAE SPLA+R+F IPG+ VYFGYDF
Sbjct: 1 MFIQTEATPNPATQKFLPGKVVMENGTAEFRSAAEAEASPLAARLFEIPGVTGVYFGYDF 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPII 92
I+V KD +W+HL+P +LG IM+HF+SG P++
Sbjct: 61 ISVSKDNAEWQHLKPAILGSIMKHFMSGKPVM 92
>gi|89900651|ref|YP_523122.1| nitrogen-fixing NifU-like protein [Rhodoferax ferrireducens T118]
gi|89345388|gb|ABD69591.1| nitrogen-fixing NifU-like [Rhodoferax ferrireducens T118]
Length = 186
Score = 154 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 6/184 (3%)
Query: 4 QTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITV 63
+ EDTPNP KF+ + + A + NA++A+ LAS +F+I + +V++ ++TV
Sbjct: 6 EIEDTPNPNARKFVLREPLTWGIAHSYENAEQAQGDALASALFAIDHVTNVFYIDRWLTV 65
Query: 64 GKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIK 122
+D Q +W+ L + + + + + D+ + D D I+
Sbjct: 66 TQDGQANWDALVREIAVPLRAAPAASEQSAAAVFEARAHVADLSAQDRQRLDD-----IE 120
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
+LD +RP + DGGD+ G + + +GAC CPSA G+ + L P+
Sbjct: 121 LILDQEIRPYLQSDGGDLHILGLAGNQLIVHYQGACGTCPSAISGTLQGIESRLRTLEPD 180
Query: 183 VKDI 186
++ I
Sbjct: 181 IEVI 184
>gi|57335931|emb|CAH25367.1| nifU-like protein [Guillardia theta]
Length = 183
Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 74/127 (58%), Gaps = 8/127 (6%)
Query: 65 KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEV 124
KDQ+ W ++P V I++ + SG II + D E DS +V IKE+
Sbjct: 32 KDQHSWAEMKPEVFDAILDFYASGQSIIT------AEEDMPQDTKVNEDDSEIVAMIKEL 85
Query: 125 LDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
LD R+RPAV DGGDI F G+ + G V + ++GACS C S+ TLK GV N+L H+VPE
Sbjct: 86 LDTRIRPAVQDDGGDISFIGFDEETGRVTVRLQGACSTCSSSKVTLKSGVENMLMHYVPE 145
Query: 183 VKDIRTV 189
V ++ V
Sbjct: 146 VTEVVAV 152
>gi|310877201|gb|ADP36961.1| hypothetical protein [Asterochloris sp. DA2]
Length = 141
Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats.
Identities = 58/118 (49%), Positives = 76/118 (64%), Gaps = 7/118 (5%)
Query: 70 WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRV 129
W L+P V IM+HF SGDP++ + E DS VV IKE+L+ R+
Sbjct: 3 WSVLKPDVFXAIMDHFTSGDPLLLDDDEYGA-----SDTAIQEDDSDVVAMIKELLETRI 57
Query: 130 RPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
RPAV DGGDIVF+G+ + GIV L M+GACSGCPS++ TLK G+ N+L H++PEVK
Sbjct: 58 RPAVMEDGGDIVFQGFDENSGIVKLKMQGACSGCPSSAVTLKSGIENMLKHYIPEVKS 115
>gi|323336723|gb|EGA77987.1| Nfu1p [Saccharomyces cerevisiae Vin13]
Length = 174
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 82/145 (56%), Gaps = 10/145 (6%)
Query: 55 YFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD-------DMG 106
G DF+T+ KD W ++P ++ ++ + G+ +I + + +M
Sbjct: 1 MIGDDFLTINKDRMVHWNSIKPEIIDLLTKQLAXGEDVISKEFHAVQEEEGEGGYKINMP 60
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSA 164
+ E D V + I+E++D R+RPA+ DGGDI ++G+ G V+L ++GAC+ C S+
Sbjct: 61 KFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCSSS 120
Query: 165 SETLKYGVANILNHFVPEVKDIRTV 189
TLKYG+ ++L H+V EVK++ +
Sbjct: 121 EVTLKYGIESMLKHYVDEVKEVIQI 145
>gi|149195565|ref|ZP_01872622.1| putative nitrogen-fixing protein NifU [Lentisphaera araneosa
HTCC2155]
gi|149141027|gb|EDM29423.1| putative nitrogen-fixing protein NifU [Lentisphaera araneosa
HTCC2155]
Length = 185
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 16/188 (8%)
Query: 1 MFI-QTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+F+ E TPNP LK++ + +L +G FS A+EA LA F++ G+ S+++ +
Sbjct: 2 IFVTHMETTPNPNALKYVLNETILEDGICQFSAAEEA-TDDLARACFAVEGVVSIFYRDN 60
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+IT+ K D DW + + I + + K + +F E + V
Sbjct: 61 YITITKNDSADWFEIEMTIKDEIN----------NRVEAIEFKAQAVPEINFGEKQTLVF 110
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I ++LD +RP +A DGG + + ++ + +GAC CPS++ + NIL
Sbjct: 111 E-IDDILDETIRPGLAMDGGGVDIIDLSDEMVLSVRYQGACGSCPSSTTGTLMAIENILQ 169
Query: 178 H-FVPEVK 184
F P +
Sbjct: 170 EQFDPRIT 177
>gi|256089666|ref|XP_002580899.1| iron-sulfur cluster scaffold protein nfu-related [Schistosoma
mansoni]
gi|238666574|emb|CAZ37138.1| iron-sulfur cluster scaffold protein nfu-related [Schistosoma
mansoni]
Length = 153
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 40/100 (40%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+FIQ ++TPNP +LK+ PG+ VL G F + ++ SPLA ++F I G+ V+FG DF
Sbjct: 44 LFIQVQETPNPNSLKYFPGKPVLGSGTRDFPSCTQSTSSPLARQLFRIEGVERVFFGPDF 103
Query: 61 ITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD 99
IT+ K D ++W ++P V IM+ + SG P++ D
Sbjct: 104 ITITKNDDFEWAVIKPDVYATIMDFYSSGQPVVSEEKAQD 143
>gi|323304101|gb|EGA57879.1| Nfu1p [Saccharomyces cerevisiae FostersB]
Length = 174
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 45/145 (31%), Positives = 81/145 (55%), Gaps = 10/145 (6%)
Query: 55 YFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD-------DMG 106
G DF+T+ KD W ++P ++ ++ + + +I + + +M
Sbjct: 1 MIGDDFLTINKDRMVHWNSIKPEIIDLLTKQLAYXEDVISKEFHAVQEEEGEGGYKINMP 60
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSA 164
+ E D V + I+E++D R+RPA+ DGGDI ++G+ G V+L ++GAC+ C S+
Sbjct: 61 KFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCSSS 120
Query: 165 SETLKYGVANILNHFVPEVKDIRTV 189
TLKYG+ ++L H+V EVK++ +
Sbjct: 121 EVTLKYGIESMLKHYVDEVKEVIQI 145
>gi|329904748|ref|ZP_08273923.1| nitrogen-fixing NifU-like protein [Oxalobacteraceae bacterium
IMCC9480]
gi|327547851|gb|EGF32611.1| nitrogen-fixing NifU-like protein [Oxalobacteraceae bacterium
IMCC9480]
Length = 186
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 7/187 (3%)
Query: 4 QTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITV 63
+ +DTPNP +KF + + A + N +A PLA+ +F++ + +V++ ++TV
Sbjct: 6 EIDDTPNPNAVKFTLHEPLSWGVAHAYDNPAQAAGDPLATALFALDHVTNVFYTDRWLTV 65
Query: 64 GKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIK 122
+D + DW L + + + + E + RI
Sbjct: 66 TQDGEADWPALVRLIAVPLRAAPA-----AAAQSAELVSAARLAVHTMSEDEQDRFARIT 120
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
++LD ++RPA+ DGGD+ G + + +GAC CPS+ + N+L P+
Sbjct: 121 DLLDLQIRPALQADGGDLHVLGLSGDTLSIHYQGACGTCPSSIGGTLASIENLLRSIEPD 180
Query: 183 VKDIRTV 189
+ ++ V
Sbjct: 181 I-AVQAV 186
>gi|209883397|ref|YP_002287254.1| nifu protein [Oligotropha carboxidovorans OM5]
gi|209871593|gb|ACI91389.1| nifu protein [Oligotropha carboxidovorans OM5]
Length = 210
Score = 144 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 54/133 (40%), Positives = 81/133 (60%), Gaps = 5/133 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE+TP+P +KF+PG+ VL EG ++ + + A SPLA ++F+IPG+A V D
Sbjct: 1 MFIQTEETPDPERMKFLPGREVLPEGTLNLKSREHAGSSPLAEQLFAIPGVAGVLLNKDS 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
I V + DW+HL+P +LG+IMEHF+SG P++ + D E+D+ R
Sbjct: 61 IVVTRSDSDWQHLKPAILGVIMEHFMSGAPVLRAPPAA---PERTAESDGGETDA--TGR 115
Query: 121 IKEVLDNRVRPAV 133
I+E L + P +
Sbjct: 116 IREALRKVIDPEL 128
>gi|221504979|gb|EEE30644.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 235
Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 24 VEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKD-QYDWEHLRPPVLGMIM 82
+G F +A L F I G +SV ++TV K DW+ L PV I
Sbjct: 3 EKGTGTFR-CTQAHTLSLLFCTFQIDGTSSVLIAGGYVTVVKARDTDWKDLEEPVKRCIQ 61
Query: 83 EHFISGDPIIHNGGLGDMKLDDMG--------SGDFIESDSAVVQRIKEVLDNRVRPAVA 134
+H SG P + + E + + + I+E+L R RP +
Sbjct: 62 DHLTSGIPAVQRAVSSEDVSGAAEGRPQVPEKKNAKSEEEEDLSEAIRELLHMRARPMLQ 121
Query: 135 RDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
DGGD+ + + GIV++ ++G+C GCPS+ T+K G+ +L +++PEV+ I V
Sbjct: 122 ADGGDLEMMRFDEETGIVWVHLKGSCEGCPSSLITVKRGMKQMLQYYIPEVRTILRV 178
>gi|237843489|ref|XP_002371042.1| NifU-like domain-containing protein [Toxoplasma gondii ME49]
gi|211968706|gb|EEB03902.1| NifU-like domain-containing protein [Toxoplasma gondii ME49]
gi|221484803|gb|EEE23097.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 235
Score = 143 bits (362), Expect = 9e-33, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 24 VEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKD-QYDWEHLRPPVLGMIM 82
+G F +A L F I G +SV ++TV K DW+ L PV I
Sbjct: 3 EKGTGTFR-CTQAHTLSLLFCTFQIDGTSSVLIAGGYVTVVKARDTDWKDLEEPVKRCIQ 61
Query: 83 EHFISGDPIIHNGGLGDMKLDDMG--------SGDFIESDSAVVQRIKEVLDNRVRPAVA 134
+H SG P + + E + + + I+E+L R RP +
Sbjct: 62 DHLTSGIPAVQRAVSSEDVSGAAEGRPEVPEKKNAKSEEEEDLSEAIRELLHMRARPMLQ 121
Query: 135 RDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
DGGD+ + + GIV++ ++G+C GCPS+ T+K G+ +L +++PEV+ I V
Sbjct: 122 ADGGDLEMMRFDEETGIVWVHLKGSCEGCPSSLITVKRGMKQMLQYYIPEVRTILRV 178
>gi|149196448|ref|ZP_01873503.1| putative nitrogen-fixing protein NifU [Lentisphaera araneosa
HTCC2155]
gi|149140709|gb|EDM29107.1| putative nitrogen-fixing protein NifU [Lentisphaera araneosa
HTCC2155]
Length = 189
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 13/184 (7%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVG 64
T+ TPNP +KFI V+ +G + +SNA++ + LA+ +FSI I V+F + ITV
Sbjct: 7 TQPTPNPNAVKFILNLDVITKGRVSYSNAEDCHNNELAATLFSIACITQVHFFENVITVT 66
Query: 65 KD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKE 123
++ WE L V+ ++ + DP G + S V++I++
Sbjct: 67 QNGDMYWEELEDAVIALLQDGIDKHDPEFQVGE---------DEEERRAKLSPEVRQIED 117
Query: 124 VLDNRVRPAVARDGGDIVFKGYRDG--IVFLSMRGACSGCPSASETLKYGVANILN-HFV 180
+LD VRP++ DGGD++ GY G I+ + GAC+ C S++ + + L F
Sbjct: 118 ILDRTVRPSLQGDGGDLMVMGYDLGSKILKVMYEGACNSCASSTTGTLMAIKSTLQAEFD 177
Query: 181 PEVK 184
P+++
Sbjct: 178 PDIE 181
>gi|145544593|ref|XP_001457981.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425800|emb|CAK90584.1| unnamed protein product [Paramecium tetraurelia]
Length = 196
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 16/192 (8%)
Query: 1 MFIQTEDTPNPATLKFIP-GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+ IQ + PNP LKFIP G+ + + F+ + G+ ++G D
Sbjct: 10 LLIQVKQVPNPNFLKFIPIGKQ--SKRCLMFTTCLKPIQH---------NGVTREFYGMD 58
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+I++ K ++ W+ LR + I + + S L + + S + DS +
Sbjct: 59 YISISKKNESKWDDLRSRIFEQIFDQYESNQEGSEKQFLFEGFKQNKDSV-IQDDDSKPI 117
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANIL 176
Q IK++L++R+RP GGDIVF+ + +GI++L +G+C CP+ + TLK +L
Sbjct: 118 QLIKDILNHRIRPDFQEIGGDIVFREFDELNGILYLYKKGSCVECPATATTLKNRFEKML 177
Query: 177 NHFVPEVKDIRT 188
V +VK +
Sbjct: 178 CQNVDQVKQVIA 189
>gi|294877892|ref|XP_002768179.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
gi|239870376|gb|EER00897.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
Length = 177
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 8/160 (5%)
Query: 33 AKEAEISPLASRIFSIPGIASVYFGYDFITVGKD-QYDWEHLRPPVLGMIMEHFISGDPI 91
+ SPLA+ +F I G+ V TV K + DWE L+P V ++ + F I
Sbjct: 5 RSQCGGSPLAASLFRIHGVDKVLLAARHATVTKSPETDWEMLQPNVELVMSQFFE----I 60
Query: 92 IHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGI 149
+ + ++ G +D VV+ I E+L+ R++P V RDGGD+ F + G
Sbjct: 61 PNVKPVSPEAIEYTPEGQDQHND-EVVKSIHEILEQRIKPFVERDGGDVEFVSFDADSGE 119
Query: 150 VFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+ + + G+CSGCP +S TLK+G+ ++ H++PEVK++ +
Sbjct: 120 LEIRLVGSCSGCPKSSVTLKFGIQRMVCHYIPEVKNVTNI 159
>gi|17946069|gb|AAL49077.1| RE53788p [Drosophila melanogaster]
Length = 134
Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 47/108 (43%), Positives = 65/108 (60%), Gaps = 7/108 (6%)
Query: 82 MEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIV 141
M+ F SG P++++ + +E D V IKE+LD R+RP V DGGDIV
Sbjct: 1 MDFFASGLPVLNDAQPN-------ADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIV 53
Query: 142 FKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
F GY G+V L M+G+CS CPS+ TLK GV N+L ++PEV+ + V
Sbjct: 54 FMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQV 101
>gi|299132121|ref|ZP_07025316.1| Scaffold protein Nfu/NifU [Afipia sp. 1NLS2]
gi|298592258|gb|EFI52458.1| Scaffold protein Nfu/NifU [Afipia sp. 1NLS2]
Length = 213
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 55/151 (36%), Positives = 81/151 (53%), Gaps = 7/151 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE+T + L+F+PG+ VL EG ++ ++A SPLA ++F+IPG+A V D
Sbjct: 1 MFIQTEETQDSERLRFLPGREVLPEGTLNLKTKEQAASSPLAEQLFTIPGVAGVLLNKDS 60
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
I V + DW+HL+P +LG IMEHF+SG P++ G E D+ +
Sbjct: 61 IVVTRSGSDWQHLKPAILGAIMEHFMSGAPVVRTPPGASAHASASGE----EGDATATGQ 116
Query: 121 IKEVLDNRVRPAV---ARDGGDIVFKGYRDG 148
I+E L + P + D G + DG
Sbjct: 117 IREALRRVIDPELGYNIVDLGLVYDVTVEDG 147
>gi|327188587|gb|EGE55797.1| nitrogen fixation protein [Rhizobium etli CNPAF512]
Length = 107
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 56/107 (52%), Positives = 81/107 (75%), Gaps = 1/107 (0%)
Query: 82 MEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIV 141
MEHF+SG P++ + + + D G F E D ++V IKE+L+ RVRPAVA+DGGDI
Sbjct: 1 MEHFMSGKPVMGDASILS-EDADAGDEFFDEGDESIVLTIKELLETRVRPAVAQDGGDIT 59
Query: 142 FKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
F+G++DG V+L+M+G+CSGCPS++ TLK+GV N+L HFVPEV+++
Sbjct: 60 FRGFKDGKVYLNMKGSCSGCPSSTATLKHGVQNLLRHFVPEVQEVIA 106
>gi|254439456|ref|ZP_05052950.1| NifU-like domain protein [Octadecabacter antarcticus 307]
gi|198254902|gb|EDY79216.1| NifU-like domain protein [Octadecabacter antarcticus 307]
Length = 414
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 14/180 (7%)
Query: 10 NPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKD-QY 68
+P TL+FI V ++ + +A +PLA +F+I G+ V I V +
Sbjct: 18 DPQTLRFILDAPVQDSTSVCYDDASA--DAPLARALFAISGVQRVEVDGASIYVSRSADV 75
Query: 69 DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNR 128
DW L+ P+ I + ++ L + + G+ D+ + + ++LD+
Sbjct: 76 DWSALKAPIAAAIRD-------VLEREALPLGQRSEAPKGE----DALLFLAVADLLDSE 124
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
PA+A GG + + + V+L M G C GC ++S TL+ G+ +L +P + +I
Sbjct: 125 ANPAIASHGGSVAVERVENSDVYLRMSGGCQGCAASSATLRQGIETMLRAGLPAIGEIID 184
>gi|50593019|ref|NP_001002757.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 3
[Homo sapiens]
gi|50593023|ref|NP_001002756.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 3
[Homo sapiens]
gi|114577881|ref|XP_001137265.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 3 [Pan troglodytes]
gi|114577883|ref|XP_001137343.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 4 [Pan troglodytes]
gi|114577885|ref|XP_001137421.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 5 [Pan troglodytes]
gi|332226736|ref|XP_003262548.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like isoform 4 [Nomascus leucogenys]
gi|332226738|ref|XP_003262549.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like isoform 5 [Nomascus leucogenys]
gi|332226740|ref|XP_003262550.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like isoform 6 [Nomascus leucogenys]
Length = 113
Score = 133 bits (336), Expect = 9e-30, Method: Composition-based stats.
Identities = 44/108 (40%), Positives = 64/108 (59%), Gaps = 8/108 (7%)
Query: 82 MEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIV 141
M+ F SG P++ E D VV IKE+LD R+RP V DGGD++
Sbjct: 1 MDFFASGLPLVTEETPSGEAG--------SEEDDEVVAMIKELLDTRIRPTVQEDGGDVI 52
Query: 142 FKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+KG+ DGIV L ++G+C+ CPS+ TLK G+ N+L ++PEV+ + V
Sbjct: 53 YKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPEVEGVEQV 100
>gi|238568059|ref|XP_002386363.1| hypothetical protein MPER_15421 [Moniliophthora perniciosa FA553]
gi|215438109|gb|EEB87293.1| hypothetical protein MPER_15421 [Moniliophthora perniciosa FA553]
Length = 105
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
MFIQTE TPN +LKFIPG V+ EG F + + A SPLA R+ I G+ +V++G DF
Sbjct: 1 MFIQTETTPNDDSLKFIPGIPVMGEGTAEFLDTRSALASPLAIRLMGIEGVKAVFYGPDF 60
Query: 61 ITVGKDQYD-WEHLRPPVLGMIMEHFISGDPIIHNGGLGD 99
+T+ KD + W ++P V ++ME F SG + + +
Sbjct: 61 VTISKDSENPWAVIKPEVYSILMEFFSSGQKMFRSDEERE 100
>gi|120434576|ref|YP_860269.1| hypothetical protein GFO_0207 [Gramella forsetii KT0803]
gi|117576726|emb|CAL65195.1| conserved hypothetical protein [Gramella forsetii KT0803]
Length = 257
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
+ E TPNPA +KF+ + ++++ A+ F N +A+ +PL ++F P + ++ ++++
Sbjct: 110 VYAESTPNPAVMKFVANKKLVLK-AVEFKNIDDAKNAPLVQKLFHFPFVKEIFIDENYVS 168
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGG---LGDMKLDDMGSGDFIESDSAVV 118
+ K D WE + + I + G+ +++ D + E+
Sbjct: 169 IQKYDMAGWEEITMELREFIRNYIEEGNEVLNVESVQVAADSSSEKGTKTPEFENLDDTS 228
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFK 143
Q+I +LD ++PAVA DGG+I+F
Sbjct: 229 QQIIAILDEYIKPAVASDGGNILFD 253
Score = 71.7 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 1/116 (0%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I T P+ KF + + + F N EA SP+A ++F +P + +VY +FI
Sbjct: 6 INIVRTTTPSIAKFEADKFLTRHESFEFKNIDEASRSPIAQQLFYLPFVKTVYIAQNFIA 65
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+ K D +WE + V I + G +I K+ + + + +
Sbjct: 66 IEKYDIVEWEDVEKEVAEQIETYLNKGGEVIKEVKASTGKVPVTVYAESTPNPAVM 121
>gi|237653650|ref|YP_002889964.1| nitrogen-fixing NifU domain protein [Thauera sp. MZ1T]
gi|237624897|gb|ACR01587.1| nitrogen-fixing NifU domain protein [Thauera sp. MZ1T]
Length = 202
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 10/193 (5%)
Query: 7 DTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKD 66
TPNP KF+ + HFS L + ++PG+ +Y FIT+ +D
Sbjct: 9 STPNPLANKFMLDAPLYTGAPRHFSAGVAVVGDTLGESLLAVPGVVDIYCTGGFITITRD 68
Query: 67 -QYDWEHLRPPVLGMIMEHFIS---------GDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
W + P V +I H G +G + + D+
Sbjct: 69 PGTPWSAIEPAVTELIEGHKARRVIGIANPAGPGGAAGAAIGAGEAVAEEPVEVEADDAE 128
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++ RI ++LD +RP + +DGG + ++ + + +GAC GCPS+S + + N+L
Sbjct: 129 LLMRINQILDEHIRPFLDQDGGGLDVVKLKEFTLTVRYKGACGGCPSSSTGTLFAINNLL 188
Query: 177 NHFVPEVKDIRTV 189
++V + + +
Sbjct: 189 QNYVDDRLLVEPI 201
>gi|167042854|gb|ABZ07571.1| putative NifU-like domain protein [uncultured marine microorganism
HF4000_ANIW137J11]
Length = 225
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 16/188 (8%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I+ E T + +F+ + L +G F++ AE +PLA +F++P +++V D ++
Sbjct: 6 IRGEPTADQQVCRFVVDRS-LHDGNASFTSTAAAEGAPLAEALFALPDVSAVTIARDTVS 64
Query: 63 VGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
V K +W + + I SG+P + + + +R+
Sbjct: 65 VTKQGDAEWPEIGKLIGDAIRAQIASGEPAVGEMTPASGE--------------ELFERV 110
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
+ VL N + P++A GG + + +G ++ M G C GC A TLK+G+ + L VP
Sbjct: 111 QAVLVNEINPSIANHGGVVTLQRIEEGKAYVQMGGGCQGCGMADVTLKHGIESYLRQKVP 170
Query: 182 EVKDIRTV 189
E+ ++ V
Sbjct: 171 EISEVVDV 178
>gi|294877894|ref|XP_002768180.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
gi|239870377|gb|EER00898.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
Length = 251
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 12/185 (6%)
Query: 12 ATLKFIPG--QVVLVEGA--IHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK-D 66
+ F + +L GA + F + + + SPLA +F I G+ V + + V K
Sbjct: 58 NVMIFWLNNDKKILPSGAKGMTFDSKEGSSQSPLALSLFKIEGVERVVLTHHNVAVSKVS 117
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLD 126
DW ++P V ++ F P + + ++ + + +++RI EVLD
Sbjct: 118 SIDWCFVKPKVESVLSNFFA--VPGLQSVYRSALQFETEVEE---AEKAKLMERIAEVLD 172
Query: 127 NRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVK 184
+R+RP + DGGD+ + + G++ + ++GAC+GCP +S TL++ + N+L VPEVK
Sbjct: 173 DRIRPVLQDDGGDVDVADFDEETGVLSVRLKGACAGCPMSSVTLRFRIENMLVQSVPEVK 232
Query: 185 DIRTV 189
+ +
Sbjct: 233 KVINI 237
>gi|254455102|ref|ZP_05068538.1| NifU-like domain protein [Octadecabacter antarcticus 238]
gi|198263804|gb|EDY88075.1| NifU-like domain protein [Octadecabacter antarcticus 238]
Length = 419
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 15/188 (7%)
Query: 3 IQTEDT-PNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
I+ + T +P TL+FI V ++ + +A +PLA +F+I G+ V I
Sbjct: 10 IRVQPTVKDPQTLRFILEAPVQDSTSVCYDDASA--DAPLARALFAISGVQRVEVDGASI 67
Query: 62 TVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
V + DW L+ P+ I + S + + K +D +
Sbjct: 68 YVSRSTDVDWSALKAPIAVAIRDVLDS-EALPLGQRSEAPKGEDALLLLAVAELL----- 121
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
D PA+A GG + + + V+L M G C GC ++S TL+ G+ +L +
Sbjct: 122 -----DCEANPAIASHGGSVAVERVENSDVYLRMSGGCQGCAASSATLRQGIETMLRAGL 176
Query: 181 PEVKDIRT 188
P + +I
Sbjct: 177 PAIGEIID 184
>gi|213407222|ref|XP_002174382.1| NifU-like protein c [Schizosaccharomyces japonicus yFS275]
gi|212002429|gb|EEB08089.1| NifU-like protein c [Schizosaccharomyces japonicus yFS275]
Length = 183
Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 88 GDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD 147
G P + + ++SDS V IKE++D+ +RP++ DGGD+ ++G+ +
Sbjct: 43 GAPFHGEPVIDGTPFNPSADTQILDSDSETVAMIKELIDSSIRPSIQEDGGDLEYRGFDE 102
Query: 148 --GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
G V+L +RG+C C S+ TLK G+ +L H++PEVK++
Sbjct: 103 QTGTVYLKLRGSCRTCASSEITLKSGIQQMLMHYIPEVKNVEQ 145
>gi|118340603|gb|ABK80653.1| uncharacterized protein [uncultured marine Nitrospinaceae
bacterium]
Length = 253
Score = 126 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
+ I+ + +P F + ++ + +F++ + AE S LA R+FS + +V
Sbjct: 61 VLIKAQPSPTGDQCLFTVNRSLMTGHSWYFADFESAEGSSLAERLFSQEDVETVLVCECT 120
Query: 61 ITVG-KDQY--DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
+T+ KD+ DW L V I E G+ +I + D+ ++ V
Sbjct: 121 VTITRKDKTLFDWGPLAKDVGTAIREAIQDGEGLIAEKIIADLPTEE-----------EV 169
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I++V+D V P VA GG+I R V + M G C GC +A TLK G+
Sbjct: 170 REGIQKVIDVEVNPGVAGHGGNISLLDVRGNSVTIQMGGGCQGCSAADLTLKQGIHTSFR 229
Query: 178 HFVPEVKDI 186
VP+V I
Sbjct: 230 TAVPKVGAI 238
>gi|313230548|emb|CBY18764.1| unnamed protein product [Oikopleura dioica]
Length = 140
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FI TE TPNP LKF+PG+ VL G F + +EA SPLA RIF++ G+ +FG D
Sbjct: 15 LFITTEVTPNPNALKFVPGRDVLGAGATCDFPDIREAYKSPLAKRIFAVDGVKGCFFGPD 74
Query: 60 FITVGKDQY--DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKL 102
F+T+ + DW ++ + ++ + F S PII+ L +
Sbjct: 75 FVTIIRHDETDDWPVMKAELFAVLTDFFDSNLPIINEDALPNQDT 119
>gi|313220326|emb|CBY31182.1| unnamed protein product [Oikopleura dioica]
Length = 140
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+FI TE TPNP LKF+PG+ VL G F + +EA SPLA RIF++ G+ +FG D
Sbjct: 15 LFITTEVTPNPNALKFVPGRDVLGAGATCDFPDIREAYKSPLAKRIFAVDGVKGCFFGPD 74
Query: 60 FITVGKDQY--DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKL 102
F+T+ + DW ++ + ++ + F S PII+ L +
Sbjct: 75 FVTIIRHDETDDWPVMKAELFAVLTDFFDSNLPIINEDALPNQDT 119
>gi|157874760|ref|XP_001685794.1| hypothetical protein [Leishmania major strain Friedlin]
gi|68128867|emb|CAJ06031.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 426
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLD 126
+ DW L+ V ++ +H SG+P + E DS VV IKE++
Sbjct: 216 ETDWSELKLHVSALLTDHICSGNPHVDPSAP-----HPHADTAPEEGDSEVVLMIKELVS 270
Query: 127 NRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVK 184
+RP + DGGD+ F G+ G + + + GAC C S+ TL + H++PEV
Sbjct: 271 TTIRPQLQDDGGDLRFVGFDPVLGDMHVELLGACRTCKSSKTTLVDLIERTTRHWIPEVS 330
Query: 185 DIRTV 189
+R V
Sbjct: 331 AVRDV 335
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQV--VLVEGAIHFSNAKEAEISPLASRIF-SIPGIASVYFG 57
+F++ + TPN A KF ++ + N+ + +SPLA + ++P + V G
Sbjct: 47 VFVRFQPTPNDACYKFYVDEMQFLPPNAHTMVFNSTNSYLSPLAHTLLEALPMVEEVTVG 106
Query: 58 YDFITVGKDQ 67
F+TV + +
Sbjct: 107 TSFVTVKRVE 116
>gi|322502114|emb|CBZ37197.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 448
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLD 126
+ DW L+ V ++ +H SG+P + E DS VV IKE++
Sbjct: 238 ETDWSELKLHVSALLTDHICSGNPHVDPSAP-----HPHADTVPEEGDSEVVLMIKELVS 292
Query: 127 NRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVK 184
+RP + DGGD+ F G+ G + + + GAC C S+ TL + H++PEV
Sbjct: 293 TTIRPQLQDDGGDLRFVGFDPVLGDMHVELLGACRTCKSSKTTLVDLIERTTRHWIPEVS 352
Query: 185 DIRTV 189
++ V
Sbjct: 353 AVKDV 357
Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQV--VLVEGAIHFSNAKEAEISPLASRIF-SIPGIASVYFG 57
+F++ + TPN A KF ++ + N+ + ISPLA + ++P + V G
Sbjct: 69 VFVRFQPTPNDACYKFYVDEMQFLPPNAHTMVFNSTNSYISPLAHTLLEALPMVEEVTVG 128
Query: 58 YDFITVGKDQ 67
F+TV + +
Sbjct: 129 TSFVTVKRVE 138
>gi|146097555|ref|XP_001468136.1| hypothetical protein [Leishmania infantum]
gi|134072503|emb|CAM71216.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 448
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLD 126
+ DW L+ V ++ +H SG+P + E DS VV IKE++
Sbjct: 238 ETDWSELKLHVSALLTDHICSGNPHVDPSAP-----HPHADTVPEEGDSEVVLMIKELVS 292
Query: 127 NRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVK 184
+RP + DGGD+ F G+ G + + + GAC C S+ TL + H++PEV
Sbjct: 293 TTIRPQLQDDGGDLRFVGFDPVLGDMHVELLGACRTCKSSKTTLVDLIERTTRHWIPEVS 352
Query: 185 DIRTV 189
++ V
Sbjct: 353 AVKDV 357
Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQV--VLVEGAIHFSNAKEAEISPLASRIF-SIPGIASVYFG 57
+F++ + TPN A KF ++ + N+ + ISPLA + ++P + V G
Sbjct: 69 VFVRFQPTPNDACYKFYVDEMQFLPPNAHTMVFNSTNSYISPLAHTLLEALPMVEEVTVG 128
Query: 58 YDFITVGKDQ 67
F+TV + +
Sbjct: 129 TSFVTVKRVE 138
>gi|312213452|emb|CBX93534.1| hypothetical protein [Leptosphaeria maculans]
Length = 186
Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 41/100 (41%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGA----IHFSNAKEA----EISPLASRIFSIPGIA 52
MFIQTE TPN LKF P VL E + + + SPLA+ + +I G+
Sbjct: 71 MFIQTEPTPNDDALKFNPNARVLSESISSPYLEYLTPRSTLAPPHPSPLAAALMNIDGVT 130
Query: 53 SVYFGYDFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPI 91
SV+FG D+ITV KD W H++P V +I E SG I
Sbjct: 131 SVFFGTDYITVTKDSGTPWAHIKPEVFALITEFMTSGQAI 170
>gi|322820651|gb|EFZ27204.1| HIRA-interacting protein 5, putative [Trypanosoma cruzi]
Length = 452
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLD 126
W L+ V ++ +H SG P + E DS VV +KE++
Sbjct: 297 STHWSELKLHVSALLTDHLFSGRPHVDPDAP-----HPHPDTLPQEGDSEVVLILKELIS 351
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+RP + DGGDI F G++++ M GAC C S+ TL + H+VPEV ++
Sbjct: 352 TTIRPQLQLDGGDIRFVSLEGGVMYVEMLGACRRCKSSKTTLSDLIERTTRHWVPEVHEV 411
Query: 187 RT 188
R
Sbjct: 412 RE 413
Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEAEISPLASR-IFSIPGIASVYF 56
I+ ++TPN A KF V + G + F + SPLA + + +P + V
Sbjct: 111 LIRFQETPNEACYKFFVNDVAFLPAGHAGTLRF-DLDNCFQSPLAEKILHGLPMVEEVTI 169
Query: 57 GYDFITV 63
G F+TV
Sbjct: 170 GPHFVTV 176
>gi|71665794|ref|XP_819863.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70885183|gb|EAN98012.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 426
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLD 126
W L+ V ++ +H SG P + E DS VV +KE++
Sbjct: 271 STHWSELKLHVSALLTDHLFSGRPHVDPDAP-----HPHPDTLPQEGDSEVVLILKELIS 325
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+RP + DGGDI F G++++ M GAC C S+ TL + H+VPEV ++
Sbjct: 326 TTIRPQLQLDGGDIRFVSLEGGVMYVEMLGACRRCKSSKTTLSDLIERTTRHWVPEVHEV 385
Query: 187 RT 188
R
Sbjct: 386 RE 387
Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEAEISPLASR-IFSIPGIASVYF 56
I+ ++TPN A KF V + G + F + SPLA + + +P + V
Sbjct: 88 LIRFQETPNEACYKFFVNDVAFLPAGHAGTLRF-DLDNCFQSPLAEKILHGLPMVEEVTI 146
Query: 57 GYDFITV 63
G F+TV
Sbjct: 147 GPHFVTV 153
>gi|71416241|ref|XP_810158.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70874651|gb|EAN88307.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 452
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLD 126
W L+ V ++ +H SG P + E DS VV +KE++
Sbjct: 298 STHWSELKLHVSALLTDHLFSGRPHVDPDAP-----HPHPDTLPQEGDSEVVLILKELIS 352
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+RP + DGGDI F G++++ M GAC C S+ TL + H+VPEV ++
Sbjct: 353 TTIRPQLQLDGGDIRFVSLEGGVMYVEMLGACRRCKSSKTTLSDLIERTTRHWVPEVHEV 412
Query: 187 RT 188
R
Sbjct: 413 RE 414
Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVE----GAIHFSNAKEAEISPLASR-IFSIPGIASVYF 56
I+ ++TPN A KF V + G + F + SPLA + + +P + V
Sbjct: 115 LIRFQETPNEACYKFFVNDVAFLPAGHAGTLRF-DLDNCFQSPLAEKILHGLPMVEEVTI 173
Query: 57 GYDFITV 63
G F+TV
Sbjct: 174 GPHFVTV 180
>gi|322494548|emb|CBZ29850.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 426
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLD 126
+ DW L+ V ++ +H SG+P + E DS VV IKE++
Sbjct: 216 ETDWSELKLHVSALLTDHICSGNPHVDPSS-----SHPHADTLPEEGDSEVVLLIKELVS 270
Query: 127 NRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVK 184
+RP + DGGD+ F G+ G + + + GAC C S+ TL + H++PEV+
Sbjct: 271 TTIRPQLQDDGGDLRFVGFDPVLGDMHVELLGACRTCKSSKTTLVDLIERTTRHWIPEVR 330
Query: 185 DIRTV 189
++ V
Sbjct: 331 AVKDV 335
Score = 44.0 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQV--VLVEGAIHFSNAKEAEISPLASRIF-SIPGIASVYFG 57
+F++ + TPN A KF ++ + ++ + +SPLA + ++P + V G
Sbjct: 47 VFVRFQPTPNDACYKFYVDEMHFLPPNAHTMVFDSTNSYLSPLAHTLLEALPMVEEVTVG 106
Query: 58 YDFITV 63
F+TV
Sbjct: 107 TSFVTV 112
>gi|297830796|ref|XP_002883280.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329120|gb|EFH59539.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 96
Score = 122 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKY 170
DS V IKE+L+ R+RPAV DGGDI + G+ GIV L M+GACSGCPS+S TLK
Sbjct: 1 DDSETVAMIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKS 60
Query: 171 GVANILNHFVPEVKDIRT 188
G+ N+L H+V EVK +
Sbjct: 61 GIENMLMHYVSEVKGVEQ 78
>gi|159163237|pdb|1VEH|A Chain A, Solution Structure Of Rsgi Ruh-018, A Nifu-Like Domain Of
Hirip5 Protein From Mouse Cdna
Length = 92
Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 36/73 (49%), Positives = 54/73 (73%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
VV IKE+LD R+RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L
Sbjct: 14 VVAMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNML 73
Query: 177 NHFVPEVKDIRTV 189
++PEV+ + V
Sbjct: 74 QFYIPEVEGVEQV 86
>gi|304397831|ref|ZP_07379707.1| IscR-regulated protein YhgI [Pantoea sp. aB]
gi|304354542|gb|EFM18913.1| IscR-regulated protein YhgI [Pantoea sp. aB]
Length = 191
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 70/181 (38%), Gaps = 15/181 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HFS + R+F I PG + G + + L+ L
Sbjct: 3 RITDSAQEHFSKLLSKQEDGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFEKLS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D++GS + D+ +V+R++ +L ++
Sbjct: 63 AYVDELS--KPYLEDAEI-DFVTDNLGSQLTLKAPNAKMRKVSDDAPMVERVEYLLQAQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + DG L G C+GC TLK G+ L PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMIDVTLKDGIEKELLAAFPELKGVRD 179
Query: 189 V 189
+
Sbjct: 180 I 180
>gi|242237773|ref|YP_002985954.1| DNA uptake protein [Dickeya dadantii Ech703]
gi|242129830|gb|ACS84132.1| IscR-regulated protein YhgI [Dickeya dadantii Ech703]
Length = 191
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + + L+ L
Sbjct: 3 RITDSAQEHFAKLLAKQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEANDTELKFEKLS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + D D +GS + D+ +++R++ VL +++
Sbjct: 63 AYVDELSA--PYLEEAEI-DFVTDQLGSQLTLKAPNAKMRKVSDDAPLMERVEYVLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ L PE+K +R
Sbjct: 120 NPQLAGHGGRVTLMEITEEGYAILQFGGGCNGCSMVDYTLKEGIEKELLQKFPELKGVRD 179
>gi|317049909|ref|YP_004117557.1| IscR-regulated protein YhgI [Pantoea sp. At-9b]
gi|316951526|gb|ADU71001.1| IscR-regulated protein YhgI [Pantoea sp. At-9b]
Length = 191
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 15/172 (8%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
HFS + R+F I PG + G + + L+ L ++ +
Sbjct: 11 HFSKLLSKQEDGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFEKLSAYVDELSA 70
Query: 88 GDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVRPAVARDG 137
P + + + D D++GS + D+ +V+R++ +L ++ P +A G
Sbjct: 71 --PYLEDAEI-DFVTDNLGSQLTLKAPNAKMRKVSDDAPMVERVEYLLQAQINPQLAGHG 127
Query: 138 GDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
G + DG L G C+GC TLK G+ L PE+K +R
Sbjct: 128 GRVSLMEITDDGYAILQFGGGCNGCSMIDVTLKDGIEKELLAAFPELKGVRD 179
>gi|146313459|ref|YP_001178533.1| putative DNA uptake protein [Enterobacter sp. 638]
gi|166990523|sp|A4WFK2|NFUA_ENT38 RecName: Full=Fe/S biogenesis protein nfuA
gi|145320335|gb|ABP62482.1| HesB/YadR/YfhF-family protein [Enterobacter sp. 638]
Length = 191
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 73/180 (40%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ +L
Sbjct: 3 RISDSAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEASDTALKFELLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 63 AYVDELSA--PYLDDAEI-DFVTDQLGSQLTLKAPNAKMRKVSDDAPLMERVEYLLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + DG+ L G C+GC TLK G+ + + PE+K +R
Sbjct: 120 NPQLAGHGGRVTLMEITEDGLAILQFGGGCNGCSMVDVTLKEGIEKQMLNEFPELKGVRD 179
>gi|308188428|ref|YP_003932559.1| Protein gntY [Pantoea vagans C9-1]
gi|308058938|gb|ADO11110.1| Protein gntY [Pantoea vagans C9-1]
Length = 191
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 15/181 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HFS + R+F I PG + G + + L+ L
Sbjct: 3 RITDSAQEHFSKLLSKQEDGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFEKLS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D++GS + D+ +V+R++ +L ++
Sbjct: 63 AYVDELS--KPYLEDAEI-DFVTDNLGSQLTLKAPNAKMRKVSDDAPMVERVEYLLQAQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ L PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMIDVTLKDGIEKELLAAFPELKGVRD 179
Query: 189 V 189
+
Sbjct: 180 I 180
>gi|320181906|gb|EFW56812.1| NfuA Fe-S protein maturation [Shigella boydii ATCC 9905]
Length = 191
Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 72/180 (40%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ +L
Sbjct: 3 RISDAAQAHFAKLLANQEKGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDLLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYMLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + DG L G C+GC TLK G+ L + PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRD 179
>gi|261333257|emb|CBH16252.1| HIRA-interacting protein 5, putative [Trypanosoma brucei gambiense
DAL972]
Length = 337
Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLD 126
W L+ V ++ +H SG I + DS VV +KE++
Sbjct: 206 STHWSELKLHVSALLTDHLYSGRAHIDADAP-----HPHPDTIPQDGDSEVVVVLKELIS 260
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+RP + DGGDI F G D ++ + M GAC C S+ TL+ + H+VPEV+ +
Sbjct: 261 TTIRPQLQADGGDIRFVGLADSVMLVEMLGACRKCRSSKTTLRDMIERTTRHWVPEVQKV 320
Query: 187 RTV 189
V
Sbjct: 321 EEV 323
Score = 54.8 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 12/136 (8%)
Query: 7 DTPNPATLKFIP-GQVVLVE--GAIHFSNAKEAEISPLASR-IFSIPGIASVYFGYDFIT 62
+TPN A KF G L + + F + SPLA + ++P + V G DF+T
Sbjct: 49 ETPNEACYKFFVKGVEFLPQSGNTLRF-DFDNCHQSPLAKHILHNLPMVEEVTIGRDFVT 107
Query: 63 VGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIK 122
V + D + V + G+P + +++ +++K
Sbjct: 108 VRR--VDDDDTAAAVRQY--AVRLGGNPTATPEETAE--RSAALQRKVMDAMEENCEQVK 161
Query: 123 EVLDNRVRPAVARDGG 138
L R P + DGG
Sbjct: 162 -TLSGRNDPNESVDGG 176
>gi|260599716|ref|YP_003212287.1| Fe/S biogenesis protein NfuA [Cronobacter turicensis z3032]
gi|260218893|emb|CBA34248.1| Fe/S biogenesis protein nfuA [Cronobacter turicensis z3032]
Length = 191
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 73/180 (40%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ ++ R+F I PG + G + + L+ +L
Sbjct: 3 RISDAAQAHFAKLLASQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDLLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYLLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ L + PE+K +R
Sbjct: 120 NPQLAGHGGRVTLMEITDEGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRD 179
>gi|320191574|gb|EFW66224.1| NfuA Fe-S protein maturation [Escherichia coli O157:H7 str. EC1212]
Length = 191
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 73/180 (40%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ E + R+F I PG + G + + L+ +L
Sbjct: 3 RISDAAQAHFAKLLENQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDLLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYMLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + DG L G C+GC TLK G+ L + PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRD 179
>gi|295097023|emb|CBK86113.1| IscR-regulated protein YhgI [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 191
Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 72/180 (40%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 3 RISDSAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFEQLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVSDDAPLMERVEYLLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + DG+ L G C+GC TLK G+ L + PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITEDGLAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRD 179
>gi|271502336|ref|YP_003335362.1| IscR-regulated protein YhgI [Dickeya dadantii Ech586]
gi|270345891|gb|ACZ78656.1| IscR-regulated protein YhgI [Dickeya dadantii Ech586]
Length = 191
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 15/172 (8%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
HF+ + R+F I PG + G + + + L+ L ++ +
Sbjct: 11 HFAKLLAKQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEPNDTELKFEKLSAYVDELSA 70
Query: 88 GDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVRPAVARDG 137
P + + + D D +GS + D+ +++R++ VL +++ P +A G
Sbjct: 71 --PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVGDDAPLMERVEYVLQSQINPQLAGHG 127
Query: 138 GDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
G + +G L G C+GC TLK G+ L PE+K +R
Sbjct: 128 GRVSLMEITEEGYAILQFGGGCNGCSMVDYTLKEGIEKELLEKFPELKGVRD 179
>gi|291619243|ref|YP_003521985.1| YhgI [Pantoea ananatis LMG 20103]
gi|291154273|gb|ADD78857.1| YhgI [Pantoea ananatis LMG 20103]
gi|327395572|dbj|BAK12994.1| thioredoxin-like protein YhgI [Pantoea ananatis AJ13355]
Length = 191
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 71/181 (39%), Gaps = 15/181 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HFS + R+F I PG + G + + L+ L
Sbjct: 3 RITDSAQEHFSKLLSKQEDGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFEKLS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D++GS + D+ +V+R++ +L ++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDNLGSQLTLKAPNAKMRKVSDDAPMVERVEYLLQAQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + DG L G C+GC TLK G+ L P++K +R
Sbjct: 120 NPQLAGHGGRVSLMEITDDGFAILQFGGGCNGCSMIDVTLKDGIEKELLAAFPQLKGVRD 179
Query: 189 V 189
+
Sbjct: 180 I 180
>gi|297627112|ref|YP_003688875.1| NifU-like protein [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296922877|emb|CBL57457.1| NifU-like protein [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 190
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 22/191 (11%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLV-EGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
+ + E T +PATL+++ +L G + +P + + ++ V G D
Sbjct: 18 IALHPEATDDPATLRWVVSHHILPFAGTL--------ASAPGLDDLLA-DRVSRVVVGPD 68
Query: 60 FITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
+ V DW L P V +M D + + D A+
Sbjct: 69 TLLVTLAPGSDWAELGPVVRRALMRALGHTDAWVGAA-----------DARVLSGDDALG 117
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
E+++ + GG I G +DG+V + M GAC GCP+A T+ + + L
Sbjct: 118 VCADELIEGPIGDIARAHGGHIALAGVQDGVVTVKMSGACRGCPAAVITMHQRLEHQLRR 177
Query: 179 FVPEVKDIRTV 189
VP + D+R++
Sbjct: 178 RVPGLVDVRSI 188
>gi|15803918|ref|NP_289954.1| putative DNA uptake protein [Escherichia coli O157:H7 EDL933]
gi|15833510|ref|NP_312283.1| DNA uptake protein [Escherichia coli O157:H7 str. Sakai]
gi|16131290|ref|NP_417873.1| Fe/S biogenesis protein; possible scaffold/chaperone for damaged
Fe/S proteins [Escherichia coli str. K-12 substr.
MG1655]
gi|24114681|ref|NP_709191.1| putative DNA uptake protein [Shigella flexneri 2a str. 301]
gi|26250015|ref|NP_756055.1| putative DNA uptake protein [Escherichia coli CFT073]
gi|30065301|ref|NP_839472.1| putative DNA uptake protein [Shigella flexneri 2a str. 2457T]
gi|74313917|ref|YP_312336.1| putative DNA uptake protein [Shigella sonnei Ss046]
gi|82545771|ref|YP_409718.1| DNA uptake protein [Shigella boydii Sb227]
gi|82778770|ref|YP_405119.1| putative DNA uptake protein [Shigella dysenteriae Sd197]
gi|89110596|ref|AP_004376.1| predicted gluconate transport associated protein [Escherichia coli
str. K-12 substr. W3110]
gi|91212889|ref|YP_542875.1| putative DNA uptake protein [Escherichia coli UTI89]
gi|110643647|ref|YP_671377.1| putative DNA uptake protein [Escherichia coli 536]
gi|110807249|ref|YP_690769.1| putative DNA uptake protein [Shigella flexneri 5 str. 8401]
gi|117625679|ref|YP_859002.1| putative DNA uptake protein [Escherichia coli APEC O1]
gi|157155730|ref|YP_001464872.1| putative DNA uptake protein [Escherichia coli E24377A]
gi|157162891|ref|YP_001460209.1| putative DNA uptake protein [Escherichia coli HS]
gi|168747108|ref|ZP_02772130.1| protein GntY [Escherichia coli O157:H7 str. EC4113]
gi|168753167|ref|ZP_02778174.1| protein GntY [Escherichia coli O157:H7 str. EC4401]
gi|168759439|ref|ZP_02784446.1| protein GntY [Escherichia coli O157:H7 str. EC4501]
gi|168765762|ref|ZP_02790769.1| protein GntY [Escherichia coli O157:H7 str. EC4486]
gi|168772693|ref|ZP_02797700.1| protein GntY [Escherichia coli O157:H7 str. EC4196]
gi|168779498|ref|ZP_02804505.1| protein GntY [Escherichia coli O157:H7 str. EC4076]
gi|168785219|ref|ZP_02810226.1| protein GntY [Escherichia coli O157:H7 str. EC869]
gi|168797185|ref|ZP_02822192.1| protein GntY [Escherichia coli O157:H7 str. EC508]
gi|170018350|ref|YP_001723304.1| putative DNA uptake protein [Escherichia coli ATCC 8739]
gi|170082930|ref|YP_001732250.1| gluconate transport associated protein [Escherichia coli str. K-12
substr. DH10B]
gi|170681204|ref|YP_001745662.1| putative DNA uptake protein [Escherichia coli SMS-3-5]
gi|170766983|ref|ZP_02901436.1| protein GntY [Escherichia albertii TW07627]
gi|187731025|ref|YP_001882093.1| putative DNA uptake protein [Shigella boydii CDC 3083-94]
gi|188492005|ref|ZP_02999275.1| protein GntY [Escherichia coli 53638]
gi|191167295|ref|ZP_03029112.1| protein GntY [Escherichia coli B7A]
gi|191167903|ref|ZP_03029707.1| protein GntY [Escherichia coli B7A]
gi|191171521|ref|ZP_03033069.1| protein GntY [Escherichia coli F11]
gi|193061845|ref|ZP_03042942.1| protein GntY [Escherichia coli E22]
gi|193068805|ref|ZP_03049765.1| protein GntY [Escherichia coli E110019]
gi|194426967|ref|ZP_03059519.1| protein GntY [Escherichia coli B171]
gi|194435891|ref|ZP_03067994.1| protein GntY [Escherichia coli 101-1]
gi|195934903|ref|ZP_03080285.1| putative DNA uptake protein [Escherichia coli O157:H7 str. EC4024]
gi|208809095|ref|ZP_03251432.1| protein GntY [Escherichia coli O157:H7 str. EC4206]
gi|208811856|ref|ZP_03253185.1| protein GntY [Escherichia coli O157:H7 str. EC4045]
gi|208821055|ref|ZP_03261375.1| protein GntY [Escherichia coli O157:H7 str. EC4042]
gi|209396437|ref|YP_002272850.1| protein GntY [Escherichia coli O157:H7 str. EC4115]
gi|209920872|ref|YP_002294956.1| putative DNA uptake protein [Escherichia coli SE11]
gi|215488695|ref|YP_002331126.1| putative DNA uptake protein [Escherichia coli O127:H6 str.
E2348/69]
gi|217325780|ref|ZP_03441864.1| protein GntY [Escherichia coli O157:H7 str. TW14588]
gi|218550672|ref|YP_002384463.1| DNA uptake protein [Escherichia fergusonii ATCC 35469]
gi|218555963|ref|YP_002388876.1| putative DNA uptake protein [Escherichia coli IAI1]
gi|218560472|ref|YP_002393385.1| DNA uptake protein [Escherichia coli S88]
gi|218691690|ref|YP_002399902.1| putative DNA uptake protein [Escherichia coli ED1a]
gi|218697097|ref|YP_002404764.1| putative DNA uptake protein [Escherichia coli 55989]
gi|218707005|ref|YP_002414524.1| putative DNA uptake protein [Escherichia coli UMN026]
gi|227883548|ref|ZP_04001353.1| HesB family protein [Escherichia coli 83972]
gi|237703145|ref|ZP_04533626.1| Fe/S biogenesis protein nfuA [Escherichia sp. 3_2_53FAA]
gi|238902505|ref|YP_002928301.1| putative gluconate transport associated protein [Escherichia coli
BW2952]
gi|253771757|ref|YP_003034588.1| DNA uptake protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254038582|ref|ZP_04872638.1| GntY [Escherichia sp. 1_1_43]
gi|254163342|ref|YP_003046450.1| putative DNA uptake protein [Escherichia coli B str. REL606]
gi|254795329|ref|YP_003080166.1| putative DNA uptake protein [Escherichia coli O157:H7 str. TW14359]
gi|256020759|ref|ZP_05434624.1| putative DNA uptake protein [Shigella sp. D9]
gi|256025858|ref|ZP_05439723.1| putative DNA uptake protein [Escherichia sp. 4_1_40B]
gi|260846198|ref|YP_003223976.1| putative gluconate transport associated protein [Escherichia coli
O103:H2 str. 12009]
gi|260857521|ref|YP_003231412.1| putative gluconate transport associated protein [Escherichia coli
O26:H11 str. 11368]
gi|260870140|ref|YP_003236542.1| putative gluconate transport associated protein [Escherichia coli
O111:H- str. 11128]
gi|261224695|ref|ZP_05938976.1| predicted gluconate transport associated protein [Escherichia coli
O157:H7 str. FRIK2000]
gi|261254410|ref|ZP_05946943.1| putative gluconate transport associated protein [Escherichia coli
O157:H7 str. FRIK966]
gi|291284750|ref|YP_003501568.1| Fe/S biogenesis protein nfuA [Escherichia coli O55:H7 str. CB9615]
gi|293406992|ref|ZP_06650916.1| DNA uptake protein [Escherichia coli FVEC1412]
gi|293412832|ref|ZP_06655500.1| IscR-regulated protein YhgI [Escherichia coli B354]
gi|293416816|ref|ZP_06659453.1| IscR-regulated protein YhgI [Escherichia coli B185]
gi|293453720|ref|ZP_06664139.1| IscR-regulated protein YhgI [Escherichia coli B088]
gi|298382734|ref|ZP_06992329.1| DNA uptake protein [Escherichia coli FVEC1302]
gi|300815387|ref|ZP_07095612.1| IscR-regulated protein YhgI [Escherichia coli MS 107-1]
gi|300822787|ref|ZP_07102924.1| IscR-regulated protein YhgI [Escherichia coli MS 119-7]
gi|300898897|ref|ZP_07117198.1| IscR-regulated protein YhgI [Escherichia coli MS 198-1]
gi|300907442|ref|ZP_07125089.1| IscR-regulated protein YhgI [Escherichia coli MS 84-1]
gi|300919299|ref|ZP_07135813.1| IscR-regulated protein YhgI [Escherichia coli MS 115-1]
gi|300926895|ref|ZP_07142661.1| IscR-regulated protein YhgI [Escherichia coli MS 182-1]
gi|300931053|ref|ZP_07146409.1| IscR-regulated protein YhgI [Escherichia coli MS 187-1]
gi|300937287|ref|ZP_07152130.1| IscR-regulated protein YhgI [Escherichia coli MS 21-1]
gi|300946843|ref|ZP_07161084.1| IscR-regulated protein YhgI [Escherichia coli MS 116-1]
gi|300956744|ref|ZP_07169013.1| IscR-regulated protein YhgI [Escherichia coli MS 175-1]
gi|300985358|ref|ZP_07177414.1| IscR-regulated protein YhgI [Escherichia coli MS 45-1]
gi|300987300|ref|ZP_07178108.1| IscR-regulated protein YhgI [Escherichia coli MS 200-1]
gi|301019565|ref|ZP_07183727.1| IscR-regulated protein YhgI [Escherichia coli MS 69-1]
gi|301023028|ref|ZP_07186838.1| IscR-regulated protein YhgI [Escherichia coli MS 196-1]
gi|301050374|ref|ZP_07197263.1| IscR-regulated protein YhgI [Escherichia coli MS 185-1]
gi|301302293|ref|ZP_07208425.1| IscR-regulated protein YhgI [Escherichia coli MS 124-1]
gi|301329725|ref|ZP_07222468.1| IscR-regulated protein YhgI [Escherichia coli MS 78-1]
gi|301645854|ref|ZP_07245768.1| IscR-regulated protein YhgI [Escherichia coli MS 146-1]
gi|306816248|ref|ZP_07450386.1| putative DNA uptake protein [Escherichia coli NC101]
gi|307140100|ref|ZP_07499456.1| putative DNA uptake protein [Escherichia coli H736]
gi|307311921|ref|ZP_07591559.1| IscR-regulated protein YhgI [Escherichia coli W]
gi|309785841|ref|ZP_07680472.1| nifU-like domain protein [Shigella dysenteriae 1617]
gi|309794685|ref|ZP_07689107.1| IscR-regulated protein YhgI [Escherichia coli MS 145-7]
gi|312968274|ref|ZP_07782484.1| nifU-like domain protein [Escherichia coli 2362-75]
gi|312972322|ref|ZP_07786496.1| nifU-like domain protein [Escherichia coli 1827-70]
gi|331644114|ref|ZP_08345243.1| IscR-regulated protein YhgI [Escherichia coli H736]
gi|331654992|ref|ZP_08355991.1| IscR-regulated protein YhgI [Escherichia coli M718]
gi|331659703|ref|ZP_08360641.1| IscR-regulated protein YhgI [Escherichia coli TA206]
gi|331665020|ref|ZP_08365921.1| IscR-regulated protein YhgI [Escherichia coli TA143]
gi|331670236|ref|ZP_08371075.1| IscR-regulated protein YhgI [Escherichia coli TA271]
gi|331674902|ref|ZP_08375659.1| IscR-regulated protein YhgI [Escherichia coli TA280]
gi|331679478|ref|ZP_08380148.1| IscR-regulated protein YhgI [Escherichia coli H591]
gi|331685056|ref|ZP_08385642.1| IscR-regulated protein YhgI [Escherichia coli H299]
gi|332281961|ref|ZP_08394374.1| Fe/S biogenesis protein nfuA [Shigella sp. D9]
gi|51702267|sp|P63020|NFUA_ECOLI RecName: Full=Fe/S biogenesis protein nfuA
gi|51702268|sp|P63021|NFUA_ECOL6 RecName: Full=Fe/S biogenesis protein nfuA
gi|51702269|sp|P63022|NFUA_ECO57 RecName: Full=Fe/S biogenesis protein nfuA
gi|51702270|sp|P63023|NFUA_SHIFL RecName: Full=Fe/S biogenesis protein nfuA
gi|119370608|sp|Q0TC53|NFUA_ECOL5 RecName: Full=Fe/S biogenesis protein nfuA
gi|119370609|sp|Q1R5M0|NFUA_ECOUT RecName: Full=Fe/S biogenesis protein nfuA
gi|119370617|sp|Q31VL8|NFUA_SHIBS RecName: Full=Fe/S biogenesis protein nfuA
gi|119370618|sp|Q32AM7|NFUA_SHIDS RecName: Full=Fe/S biogenesis protein nfuA
gi|119370619|sp|Q3YWL1|NFUA_SHISS RecName: Full=Fe/S biogenesis protein nfuA
gi|122957141|sp|Q0SZQ1|NFUA_SHIF8 RecName: Full=Fe/S biogenesis protein nfuA
gi|150383445|sp|A1AGT8|NFUA_ECOK1 RecName: Full=Fe/S biogenesis protein nfuA
gi|166990521|sp|A7ZSU3|NFUA_ECO24 RecName: Full=Fe/S biogenesis protein nfuA
gi|166990522|sp|A8A5M2|NFUA_ECOHS RecName: Full=Fe/S biogenesis protein nfuA
gi|189041724|sp|B1IP51|NFUA_ECOLC RecName: Full=Fe/S biogenesis protein nfuA
gi|254767294|sp|B7UKB9|NFUA_ECO27 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767295|sp|B7MDP0|NFUA_ECO45 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767296|sp|B7L4U4|NFUA_ECO55 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767297|sp|B5YTW5|NFUA_ECO5E RecName: Full=Fe/S biogenesis protein nfuA
gi|254767299|sp|B7N147|NFUA_ECO81 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767300|sp|B7M1X0|NFUA_ECO8A RecName: Full=Fe/S biogenesis protein nfuA
gi|254767301|sp|B1X760|NFUA_ECODH RecName: Full=Fe/S biogenesis protein nfuA
gi|254767302|sp|B7NE19|NFUA_ECOLU RecName: Full=Fe/S biogenesis protein nfuA
gi|254767303|sp|B6I2X8|NFUA_ECOSE RecName: Full=Fe/S biogenesis protein nfuA
gi|254767304|sp|B1LHL4|NFUA_ECOSM RecName: Full=Fe/S biogenesis protein nfuA
gi|254767306|sp|B7LSB7|NFUA_ESCF3 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767329|sp|B2U3M4|NFUA_SHIB3 RecName: Full=Fe/S biogenesis protein nfuA
gi|259511741|sp|C4ZVW3|NFUA_ECOBW RecName: Full=Fe/S biogenesis protein nfuA
gi|12518044|gb|AAG58515.1|AE005563_9 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|26110444|gb|AAN82629.1|AE016768_47 Protein yhgI [Escherichia coli CFT073]
gi|606349|gb|AAA58212.1| ORF_o191 [Escherichia coli str. K-12 substr. MG1655]
gi|1789819|gb|AAC76439.1| Fe/S biogenesis protein; possible scaffold/chaperone for damaged
Fe/S proteins [Escherichia coli str. K-12 substr.
MG1655]
gi|13363730|dbj|BAB37679.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|24053889|gb|AAN44898.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30043563|gb|AAP19283.1| hypothetical protein S4328 [Shigella flexneri 2a str. 2457T]
gi|73857394|gb|AAZ90101.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81242918|gb|ABB63628.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|81247182|gb|ABB67890.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|85676627|dbj|BAE77877.1| predicted gluconate transport associated protein [Escherichia coli
str. K12 substr. W3110]
gi|91074463|gb|ABE09344.1| hypothetical protein UTI89_C3915 [Escherichia coli UTI89]
gi|110345239|gb|ABG71476.1| hypothetical protein YhgI (HesB-like domain) [Escherichia coli 536]
gi|110616797|gb|ABF05464.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|115514803|gb|ABJ02878.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|157068571|gb|ABV07826.1| protein GntY [Escherichia coli HS]
gi|157077760|gb|ABV17468.1| protein GntY [Escherichia coli E24377A]
gi|169753278|gb|ACA75977.1| IscR-regulated protein YhgI [Escherichia coli ATCC 8739]
gi|169890765|gb|ACB04472.1| predicted gluconate transport associated protein [Escherichia coli
str. K-12 substr. DH10B]
gi|170124421|gb|EDS93352.1| protein GntY [Escherichia albertii TW07627]
gi|170518922|gb|ACB17100.1| protein GntY [Escherichia coli SMS-3-5]
gi|187428017|gb|ACD07291.1| protein GntY [Shigella boydii CDC 3083-94]
gi|187771744|gb|EDU35588.1| protein GntY [Escherichia coli O157:H7 str. EC4196]
gi|188018489|gb|EDU56611.1| protein GntY [Escherichia coli O157:H7 str. EC4113]
gi|188487204|gb|EDU62307.1| protein GntY [Escherichia coli 53638]
gi|189002308|gb|EDU71294.1| protein GntY [Escherichia coli O157:H7 str. EC4076]
gi|189359050|gb|EDU77469.1| protein GntY [Escherichia coli O157:H7 str. EC4401]
gi|189364704|gb|EDU83123.1| protein GntY [Escherichia coli O157:H7 str. EC4486]
gi|189369561|gb|EDU87977.1| protein GntY [Escherichia coli O157:H7 str. EC4501]
gi|189374586|gb|EDU93002.1| protein GntY [Escherichia coli O157:H7 str. EC869]
gi|189380102|gb|EDU98518.1| protein GntY [Escherichia coli O157:H7 str. EC508]
gi|190902076|gb|EDV61821.1| protein GntY [Escherichia coli B7A]
gi|190902647|gb|EDV62379.1| protein GntY [Escherichia coli B7A]
gi|190908148|gb|EDV67739.1| protein GntY [Escherichia coli F11]
gi|192932635|gb|EDV85232.1| protein GntY [Escherichia coli E22]
gi|192957881|gb|EDV88324.1| protein GntY [Escherichia coli E110019]
gi|194414928|gb|EDX31198.1| protein GntY [Escherichia coli B171]
gi|194425434|gb|EDX41418.1| protein GntY [Escherichia coli 101-1]
gi|208728896|gb|EDZ78497.1| protein GntY [Escherichia coli O157:H7 str. EC4206]
gi|208733133|gb|EDZ81820.1| protein GntY [Escherichia coli O157:H7 str. EC4045]
gi|208741178|gb|EDZ88860.1| protein GntY [Escherichia coli O157:H7 str. EC4042]
gi|209157837|gb|ACI35270.1| protein GntY [Escherichia coli O157:H7 str. EC4115]
gi|209756428|gb|ACI76526.1| hypothetical protein ECs4256 [Escherichia coli]
gi|209756430|gb|ACI76527.1| hypothetical protein ECs4256 [Escherichia coli]
gi|209756432|gb|ACI76528.1| hypothetical protein ECs4256 [Escherichia coli]
gi|209756434|gb|ACI76529.1| hypothetical protein ECs4256 [Escherichia coli]
gi|209756436|gb|ACI76530.1| hypothetical protein ECs4256 [Escherichia coli]
gi|209914131|dbj|BAG79205.1| conserved hypothetical protein [Escherichia coli SE11]
gi|215266767|emb|CAS11207.1| predicted gluconate transport associated protein [Escherichia coli
O127:H6 str. E2348/69]
gi|217322001|gb|EEC30425.1| protein GntY [Escherichia coli O157:H7 str. TW14588]
gi|218353829|emb|CAV00186.1| putative gluconate transport associated protein [Escherichia coli
55989]
gi|218358213|emb|CAQ90860.1| putative gluconate transport associated protein [Escherichia
fergusonii ATCC 35469]
gi|218362731|emb|CAR00357.1| putative gluconate transport associated protein [Escherichia coli
IAI1]
gi|218367241|emb|CAR05015.1| putative gluconate transport associated protein [Escherichia coli
S88]
gi|218429254|emb|CAR10065.1| putative gluconate transport associated protein [Escherichia coli
ED1a]
gi|218434102|emb|CAR15019.1| putative gluconate transport associated protein [Escherichia coli
UMN026]
gi|226839088|gb|EEH71111.1| GntY [Escherichia sp. 1_1_43]
gi|226902409|gb|EEH88668.1| Fe/S biogenesis protein nfuA [Escherichia sp. 3_2_53FAA]
gi|227839427|gb|EEJ49893.1| HesB family protein [Escherichia coli 83972]
gi|238862428|gb|ACR64426.1| predicted gluconate transport associated protein [Escherichia coli
BW2952]
gi|242378937|emb|CAQ33735.1| iron-sulfur cluster scaffold protein [Escherichia coli BL21(DE3)]
gi|253322801|gb|ACT27403.1| IscR-regulated protein YhgI [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253975243|gb|ACT40914.1| predicted gluconate transport associated protein [Escherichia coli
B str. REL606]
gi|253979399|gb|ACT45069.1| predicted gluconate transport associated protein [Escherichia coli
BL21(DE3)]
gi|254594729|gb|ACT74090.1| predicted gluconate transport associated protein [Escherichia coli
O157:H7 str. TW14359]
gi|257756170|dbj|BAI27672.1| predicted gluconate transport associated protein [Escherichia coli
O26:H11 str. 11368]
gi|257761345|dbj|BAI32842.1| predicted gluconate transport associated protein [Escherichia coli
O103:H2 str. 12009]
gi|257766496|dbj|BAI37991.1| predicted gluconate transport associated protein [Escherichia coli
O111:H- str. 11128]
gi|260447567|gb|ACX37989.1| IscR-regulated protein YhgI [Escherichia coli DH1]
gi|281180446|dbj|BAI56776.1| conserved hypothetical protein [Escherichia coli SE15]
gi|281602769|gb|ADA75753.1| predicted gluconate transport-associated protein [Shigella flexneri
2002017]
gi|284822069|gb|ADB98039.1| conserved hypothetical protein [Escherichia coli]
gi|284923406|emb|CBG36500.1| putative competence protein [Escherichia coli 042]
gi|290764623|gb|ADD58584.1| Fe/S biogenesis protein nfuA [Escherichia coli O55:H7 str. CB9615]
gi|291321846|gb|EFE61277.1| IscR-regulated protein YhgI [Escherichia coli B088]
gi|291425803|gb|EFE98837.1| DNA uptake protein [Escherichia coli FVEC1412]
gi|291431392|gb|EFF04377.1| IscR-regulated protein YhgI [Escherichia coli B185]
gi|291468479|gb|EFF10972.1| IscR-regulated protein YhgI [Escherichia coli B354]
gi|294494004|gb|ADE92760.1| protein GntY [Escherichia coli IHE3034]
gi|298276570|gb|EFI18088.1| DNA uptake protein [Escherichia coli FVEC1302]
gi|299880991|gb|EFI89202.1| IscR-regulated protein YhgI [Escherichia coli MS 196-1]
gi|300298003|gb|EFJ54388.1| IscR-regulated protein YhgI [Escherichia coli MS 185-1]
gi|300306168|gb|EFJ60688.1| IscR-regulated protein YhgI [Escherichia coli MS 200-1]
gi|300316464|gb|EFJ66248.1| IscR-regulated protein YhgI [Escherichia coli MS 175-1]
gi|300357459|gb|EFJ73329.1| IscR-regulated protein YhgI [Escherichia coli MS 198-1]
gi|300399190|gb|EFJ82728.1| IscR-regulated protein YhgI [Escherichia coli MS 69-1]
gi|300400857|gb|EFJ84395.1| IscR-regulated protein YhgI [Escherichia coli MS 84-1]
gi|300408099|gb|EFJ91637.1| IscR-regulated protein YhgI [Escherichia coli MS 45-1]
gi|300413614|gb|EFJ96924.1| IscR-regulated protein YhgI [Escherichia coli MS 115-1]
gi|300417099|gb|EFK00410.1| IscR-regulated protein YhgI [Escherichia coli MS 182-1]
gi|300453498|gb|EFK17118.1| IscR-regulated protein YhgI [Escherichia coli MS 116-1]
gi|300457646|gb|EFK21139.1| IscR-regulated protein YhgI [Escherichia coli MS 21-1]
gi|300461108|gb|EFK24601.1| IscR-regulated protein YhgI [Escherichia coli MS 187-1]
gi|300524787|gb|EFK45856.1| IscR-regulated protein YhgI [Escherichia coli MS 119-7]
gi|300532279|gb|EFK53341.1| IscR-regulated protein YhgI [Escherichia coli MS 107-1]
gi|300842456|gb|EFK70216.1| IscR-regulated protein YhgI [Escherichia coli MS 124-1]
gi|300844197|gb|EFK71957.1| IscR-regulated protein YhgI [Escherichia coli MS 78-1]
gi|301075843|gb|EFK90649.1| IscR-regulated protein YhgI [Escherichia coli MS 146-1]
gi|305850644|gb|EFM51101.1| putative DNA uptake protein [Escherichia coli NC101]
gi|306908065|gb|EFN38565.1| IscR-regulated protein YhgI [Escherichia coli W]
gi|307555500|gb|ADN48275.1| putative thioredoxin-like protein [Escherichia coli ABU 83972]
gi|307628476|gb|ADN72780.1| putative DNA uptake protein [Escherichia coli UM146]
gi|308121735|gb|EFO58997.1| IscR-regulated protein YhgI [Escherichia coli MS 145-7]
gi|308926961|gb|EFP72437.1| nifU-like domain protein [Shigella dysenteriae 1617]
gi|309703824|emb|CBJ03165.1| putative competence protein [Escherichia coli ETEC H10407]
gi|310334699|gb|EFQ00904.1| nifU-like domain protein [Escherichia coli 1827-70]
gi|312287099|gb|EFR15009.1| nifU-like domain protein [Escherichia coli 2362-75]
gi|312947962|gb|ADR28789.1| putative DNA uptake protein [Escherichia coli O83:H1 str. NRG 857C]
gi|313647284|gb|EFS11736.1| nifU-like domain protein [Shigella flexneri 2a str. 2457T]
gi|315062692|gb|ADT77019.1| predicted gluconate transport associated protein [Escherichia coli
W]
gi|315137990|dbj|BAJ45149.1| Fe/S biogenesis protein nfuA [Escherichia coli DH1]
gi|315256005|gb|EFU35973.1| IscR-regulated protein YhgI [Escherichia coli MS 85-1]
gi|315286086|gb|EFU45524.1| IscR-regulated protein YhgI [Escherichia coli MS 110-3]
gi|315291745|gb|EFU51101.1| IscR-regulated protein YhgI [Escherichia coli MS 153-1]
gi|315295925|gb|EFU55234.1| IscR-regulated protein YhgI [Escherichia coli MS 16-3]
gi|315614682|gb|EFU95322.1| nifU-like domain protein [Escherichia coli 3431]
gi|320175494|gb|EFW50592.1| NfuA Fe-S protein maturation [Shigella dysenteriae CDC 74-1112]
gi|320185943|gb|EFW60692.1| NfuA Fe-S protein maturation [Shigella flexneri CDC 796-83]
gi|320197373|gb|EFW71988.1| NfuA Fe-S protein maturation [Escherichia coli WV_060327]
gi|320199587|gb|EFW74177.1| NfuA Fe-S protein maturation [Escherichia coli EC4100B]
gi|320639696|gb|EFX09290.1| Fe/S biogenesis protein NfuA [Escherichia coli O157:H7 str. G5101]
gi|320645194|gb|EFX14210.1| Fe/S biogenesis protein NfuA [Escherichia coli O157:H- str. 493-89]
gi|320650505|gb|EFX18971.1| Fe/S biogenesis protein NfuA [Escherichia coli O157:H- str. H 2687]
gi|320655697|gb|EFX23620.1| Fe/S biogenesis protein NfuA [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320661481|gb|EFX28896.1| Fe/S biogenesis protein NfuA [Escherichia coli O55:H7 str. USDA
5905]
gi|320666504|gb|EFX33487.1| Fe/S biogenesis protein NfuA [Escherichia coli O157:H7 str. LSU-61]
gi|323154249|gb|EFZ40452.1| nifU-like domain protein [Escherichia coli EPECa14]
gi|323162799|gb|EFZ48636.1| nifU-like domain protein [Escherichia coli E128010]
gi|323164978|gb|EFZ50769.1| nifU-like domain protein [Shigella sonnei 53G]
gi|323174049|gb|EFZ59677.1| nifU-like domain protein [Escherichia coli LT-68]
gi|323179060|gb|EFZ64634.1| nifU-like domain protein [Escherichia coli 1180]
gi|323182875|gb|EFZ68276.1| nifU-like domain protein [Escherichia coli 1357]
gi|323188996|gb|EFZ74280.1| nifU-like domain protein [Escherichia coli RN587/1]
gi|323376720|gb|ADX48988.1| IscR-regulated protein YhgI [Escherichia coli KO11]
gi|323934596|gb|EGB30996.1| IscR-regulated protein YhgI [Escherichia coli E1520]
gi|323939366|gb|EGB35577.1| IscR-regulated protein YhgI [Escherichia coli E482]
gi|323944364|gb|EGB40439.1| IscR-regulated protein YhgI [Escherichia coli H120]
gi|323950071|gb|EGB45954.1| IscR-regulated protein YhgI [Escherichia coli H252]
gi|323954649|gb|EGB50431.1| IscR-regulated protein YhgI [Escherichia coli H263]
gi|323959586|gb|EGB55238.1| IscR-regulated protein YhgI [Escherichia coli H489]
gi|323966227|gb|EGB61663.1| IscR-regulated protein YhgI [Escherichia coli M863]
gi|323970012|gb|EGB65287.1| IscR-regulated protein YhgI [Escherichia coli TA007]
gi|323974782|gb|EGB69894.1| IscR-regulated protein YhgI [Escherichia coli TW10509]
gi|324009392|gb|EGB78611.1| IscR-regulated protein YhgI [Escherichia coli MS 57-2]
gi|324014596|gb|EGB83815.1| IscR-regulated protein YhgI [Escherichia coli MS 60-1]
gi|324018651|gb|EGB87870.1| IscR-regulated protein YhgI [Escherichia coli MS 117-3]
gi|324111727|gb|EGC05707.1| IscR-regulated protein YhgI [Escherichia fergusonii B253]
gi|324116389|gb|EGC10308.1| IscR-regulated protein YhgI [Escherichia coli E1167]
gi|325498956|gb|EGC96815.1| putative DNA uptake protein [Escherichia fergusonii ECD227]
gi|326337622|gb|EGD61457.1| NfuA Fe-S protein maturation [Escherichia coli O157:H7 str. 1044]
gi|326344627|gb|EGD68376.1| NfuA Fe-S protein maturation [Escherichia coli O157:H7 str. 1125]
gi|327251050|gb|EGE62743.1| nifU-like domain protein [Escherichia coli STEC_7v]
gi|330909447|gb|EGH37961.1| NfuA Fe-S protein maturation [Escherichia coli AA86]
gi|331036408|gb|EGI08634.1| IscR-regulated protein YhgI [Escherichia coli H736]
gi|331047007|gb|EGI19085.1| IscR-regulated protein YhgI [Escherichia coli M718]
gi|331052918|gb|EGI24951.1| IscR-regulated protein YhgI [Escherichia coli TA206]
gi|331057530|gb|EGI29516.1| IscR-regulated protein YhgI [Escherichia coli TA143]
gi|331062298|gb|EGI34218.1| IscR-regulated protein YhgI [Escherichia coli TA271]
gi|331067811|gb|EGI39209.1| IscR-regulated protein YhgI [Escherichia coli TA280]
gi|331072650|gb|EGI43975.1| IscR-regulated protein YhgI [Escherichia coli H591]
gi|331077427|gb|EGI48639.1| IscR-regulated protein YhgI [Escherichia coli H299]
gi|332085565|gb|EGI90731.1| nifU-like domain protein [Shigella boydii 5216-82]
gi|332090470|gb|EGI95568.1| nifU-like domain protein [Shigella boydii 3594-74]
gi|332104313|gb|EGJ07659.1| Fe/S biogenesis protein nfuA [Shigella sp. D9]
gi|332345367|gb|AEE58701.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|332749484|gb|EGJ79901.1| nifU-like domain protein [Shigella flexneri K-671]
gi|332750331|gb|EGJ80742.1| nifU-like domain protein [Shigella flexneri 4343-70]
gi|332751428|gb|EGJ81831.1| nifU-like domain protein [Shigella flexneri 2747-71]
gi|332763599|gb|EGJ93838.1| iron-sulfur cluster scaffold protein [Shigella flexneri 2930-71]
gi|332996395|gb|EGK16022.1| nifU-like domain protein [Shigella flexneri VA-6]
gi|332996634|gb|EGK16259.1| nifU-like domain protein [Shigella flexneri K-272]
gi|332997137|gb|EGK16753.1| nifU-like domain protein [Shigella flexneri K-218]
gi|333012337|gb|EGK31718.1| nifU-like domain protein [Shigella flexneri K-304]
gi|333013043|gb|EGK32419.1| nifU-like domain protein [Shigella flexneri K-227]
Length = 191
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 72/180 (40%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ +L
Sbjct: 3 RISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDLLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYMLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + DG L G C+GC TLK G+ L + PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRD 179
>gi|161505922|ref|YP_001573034.1| putative DNA uptake protein [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|189041726|sp|A9MMB3|NFUA_SALAR RecName: Full=Fe/S biogenesis protein nfuA
gi|160867269|gb|ABX23892.1| hypothetical protein SARI_04103 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 191
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 72/180 (40%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ +L
Sbjct: 3 RISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDLLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ VL +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYVLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ L + PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRD 179
>gi|331649212|ref|ZP_08350298.1| IscR-regulated protein YhgI [Escherichia coli M605]
gi|331041710|gb|EGI13854.1| IscR-regulated protein YhgI [Escherichia coli M605]
Length = 191
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 72/180 (40%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ +L
Sbjct: 3 RISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDLLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 63 AYIDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYMLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + DG L G C+GC TLK G+ L + PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRD 179
>gi|156936423|ref|YP_001440339.1| putative DNA uptake protein [Cronobacter sakazakii ATCC BAA-894]
gi|166990524|sp|A7ME80|NFUA_ENTS8 RecName: Full=Fe/S biogenesis protein nfuA
gi|156534677|gb|ABU79503.1| hypothetical protein ESA_04324 [Cronobacter sakazakii ATCC BAA-894]
Length = 191
Score = 119 bits (300), Expect = 1e-25, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 73/180 (40%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ ++ R+F I PG + G + + L+ +L
Sbjct: 3 RISDAAQAHFAKLLASQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDLLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYMLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ L + PE+K +R
Sbjct: 120 NPQLAGHGGRVTLMEITDEGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRD 179
>gi|261341914|ref|ZP_05969772.1| IscR-regulated protein YhgI [Enterobacter cancerogenus ATCC 35316]
gi|288315816|gb|EFC54754.1| IscR-regulated protein YhgI [Enterobacter cancerogenus ATCC 35316]
Length = 191
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 72/180 (40%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 3 RISDSAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFEQLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVSDDAPLMERVEYMLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + DG+ L G C+GC TLK G+ L + PE+K +R
Sbjct: 120 NPQLAGHGGRVTLMEITEDGLAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRD 179
>gi|239993300|ref|ZP_04713824.1| putative DNA uptake protein [Alteromonas macleodii ATCC 27126]
Length = 192
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 67/180 (37%), Gaps = 14/180 (7%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ E HF + S R+F + PG +S G + D + R P G
Sbjct: 3 TISEEAQAHFVKLLSKQESGTNIRVFVVNPGTSSAECGVSYCPP--DAVEETDTRLPFNG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVR 130
P + + + + D+ +++RI ++++ +
Sbjct: 61 FDAVVDEESAPYLEEAEIDYVTDQMGSQLTLKAPNAKARKVSDDAPLIERINYMIESEIN 120
Query: 131 PAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
P +A GG++V DG L G C+GC TLK G+ ++ F E+K +R
Sbjct: 121 PQLASHGGNVVLTELTDDGYAILQFGGGCNGCSMVDVTLKEGIEKQMVEQFAGELKGVRD 180
>gi|194430959|ref|ZP_03063252.1| protein GntY [Shigella dysenteriae 1012]
gi|194420414|gb|EDX36490.1| protein GntY [Shigella dysenteriae 1012]
gi|332085774|gb|EGI90938.1| nifU-like domain protein [Shigella dysenteriae 155-74]
Length = 191
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 72/180 (40%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ +L
Sbjct: 3 RISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDLLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYMLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + DG L G C+GC TLK G+ L + PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLKEGIEKHLLNEFPELKGVRD 179
>gi|317494418|ref|ZP_07952832.1| IscR-regulated protein YhgI [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917668|gb|EFV39013.1| IscR-regulated protein YhgI [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 191
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + + R+F I PG + G + + + L L
Sbjct: 3 RITEAAQEHFAKLLANQEAGTQIRVFVINPGTPTAECGVSYCPPDAVEANDTKLDFEKLS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS ++ D+ +++R++ VL +++
Sbjct: 63 AYVDDVSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVDDDAPLIERVEYVLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + DGI L G C+GC TLK G+ L PE+K +R
Sbjct: 120 NPQLAGHGGKVTLMEITEDGIAILQFGGGCNGCSMVDYTLKEGIEKELLQKFPELKGVRD 179
>gi|56459359|ref|YP_154640.1| putative DNA uptake protein [Idiomarina loihiensis L2TR]
gi|81363232|sp|Q5QZC8|NFUA_IDILO RecName: Full=Fe/S biogenesis protein nfuA
gi|56178369|gb|AAV81091.1| hypothetical protein IL0248 [Idiomarina loihiensis L2TR]
Length = 192
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 68/181 (37%), Gaps = 14/181 (7%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F + PG+A+ G + D + + R P G
Sbjct: 3 RISEAAQSHFKKLLADQPDGTCIRVFVVNPGMANAECGVSYCPP--DSVEPDDERLPFNG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVR 130
P + + + + + + D+ +++R++ V+ +
Sbjct: 61 FDAVVDSGSAPFLEDAAIDFEEQEMGSQLTLKAPNAKARKVADDAPLIERVEYVIQAEIN 120
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRT 188
P +A GG ++ DG+ L G C+GC TLK G+ L P EVK +R
Sbjct: 121 PQLASHGGQVMISEITDDGVAILQFGGGCNGCSMIDVTLKNGIEKELLERFPEEVKGVRD 180
Query: 189 V 189
+
Sbjct: 181 I 181
>gi|293393405|ref|ZP_06637716.1| Fe/S-biogenesis protein NfuA [Serratia odorifera DSM 4582]
gi|291424006|gb|EFE97224.1| Fe/S-biogenesis protein NfuA [Serratia odorifera DSM 4582]
Length = 191
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 72/180 (40%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 3 RITDTAQEHFAKLLANQEEGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFDKLS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS ++ ++ +++R++ VL +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVDENAPLMERVEYVLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + DG+ L G C+GC TLK G+ L PE+K +R
Sbjct: 120 NPQLAGHGGRVTLMEITEDGLAILQFGGGCNGCSMVDVTLKEGIEKELLQKFPELKGVRD 179
>gi|21430120|gb|AAM50738.1| GM32035p [Drosophila melanogaster]
Length = 104
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 39/70 (55%), Positives = 50/70 (71%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
IKE+LD R+RP V DGGDIVF GY G+V L M+G+CS CPS+ TLK GV N+L +
Sbjct: 2 MIKELLDTRIRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFY 61
Query: 180 VPEVKDIRTV 189
+PEV+ + V
Sbjct: 62 IPEVESVEQV 71
>gi|71748540|ref|XP_823325.1| HIRA-interacting protein 5 [Trypanosoma brucei TREU927]
gi|70832993|gb|EAN78497.1| HIRA-interacting protein 5, putative [Trypanosoma brucei]
Length = 243
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLD 126
W L+ V ++ +H SG I + DS VV +KE++
Sbjct: 112 STHWSELKLHVSALLTDHLYSGRAHIDADAP-----HPHPDTIPQDGDSEVVVVLKELIS 166
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+RP + DGGDI F G D ++ + M GAC C S+ TL+ + H+VPEV+ +
Sbjct: 167 TTIRPQLQADGGDIRFVGLADSVMLVEMLGACRKCRSSKTTLRDMIERTTRHWVPEVQKV 226
Query: 187 RTV 189
V
Sbjct: 227 EEV 229
>gi|157148997|ref|YP_001456316.1| putative DNA uptake protein [Citrobacter koseri ATCC BAA-895]
gi|166990520|sp|A8AQW7|NFUA_CITK8 RecName: Full=Fe/S biogenesis protein nfuA
gi|157086202|gb|ABV15880.1| hypothetical protein CKO_04835 [Citrobacter koseri ATCC BAA-895]
Length = 191
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 15/179 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ + R+F I PG + G + + L+ +L
Sbjct: 4 ISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEASDTALKFDLLTA 63
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 64 YVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYMLQSQIN 120
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ L + PE+K +R
Sbjct: 121 PQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRD 179
>gi|16766799|ref|NP_462414.1| DNA uptake protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|62182013|ref|YP_218430.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161616554|ref|YP_001590519.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167549282|ref|ZP_02343041.1| protein GntY [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|167990716|ref|ZP_02571815.1| protein GntY [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168232650|ref|ZP_02657708.1| protein GntY [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|168235106|ref|ZP_02660164.1| protein GntY [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168241653|ref|ZP_02666585.1| protein GntY [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168260762|ref|ZP_02682735.1| protein GntY [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|168465218|ref|ZP_02699110.1| protein GntY [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|168818674|ref|ZP_02830674.1| protein GntY [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194445195|ref|YP_002042763.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194448010|ref|YP_002047536.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194472075|ref|ZP_03078059.1| protein GntY [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194735692|ref|YP_002116454.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197247966|ref|YP_002148435.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197265281|ref|ZP_03165355.1| protein GntY [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|198244988|ref|YP_002217471.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200387996|ref|ZP_03214608.1| protein GntY [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204928851|ref|ZP_03220050.1| protein GntY [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205354865|ref|YP_002228666.1| DNA uptake protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207858751|ref|YP_002245402.1| DNA uptake protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|213426878|ref|ZP_03359628.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|224585306|ref|YP_002639105.1| DNA uptake protein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|238910484|ref|ZP_04654321.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289824843|ref|ZP_06544286.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|51701441|sp|Q8ZLI7|NFUA_SALTY RecName: Full=Fe/S biogenesis protein nfuA
gi|75480222|sp|Q57IW3|NFUA_SALCH RecName: Full=Fe/S biogenesis protein nfuA
gi|189041727|sp|A9MTT1|NFUA_SALPB RecName: Full=Fe/S biogenesis protein nfuA
gi|254767317|sp|B5F8M8|NFUA_SALA4 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767318|sp|B5FKD2|NFUA_SALDC RecName: Full=Fe/S biogenesis protein nfuA
gi|254767319|sp|B5R371|NFUA_SALEP RecName: Full=Fe/S biogenesis protein nfuA
gi|254767320|sp|B5R7K3|NFUA_SALG2 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767321|sp|B4TKT8|NFUA_SALHS RecName: Full=Fe/S biogenesis protein nfuA
gi|254767322|sp|B4SVL5|NFUA_SALNS RecName: Full=Fe/S biogenesis protein nfuA
gi|254767323|sp|C0Q0I7|NFUA_SALPC RecName: Full=Fe/S biogenesis protein nfuA
gi|254767325|sp|B4TY71|NFUA_SALSV RecName: Full=Fe/S biogenesis protein nfuA
gi|16422070|gb|AAL22373.1| putative thioredoxin-like proteins and domain protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|62129646|gb|AAX67349.1| putative Thioredoxin-like proteins and domain [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161365918|gb|ABX69686.1| hypothetical protein SPAB_04370 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403858|gb|ACF64080.1| protein GntY [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194406314|gb|ACF66533.1| protein GntY [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194458439|gb|EDX47278.1| protein GntY [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194711194|gb|ACF90415.1| protein GntY [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195632440|gb|EDX50924.1| protein GntY [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197211669|gb|ACH49066.1| protein GntY [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197243536|gb|EDY26156.1| protein GntY [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197291455|gb|EDY30807.1| protein GntY [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197939504|gb|ACH76837.1| protein GntY [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|199605094|gb|EDZ03639.1| protein GntY [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|204322284|gb|EDZ07482.1| protein GntY [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|205274646|emb|CAR39700.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205325543|gb|EDZ13382.1| protein GntY [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205330667|gb|EDZ17431.1| protein GntY [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205333139|gb|EDZ19903.1| protein GntY [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205338772|gb|EDZ25536.1| protein GntY [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205344656|gb|EDZ31420.1| protein GntY [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205350434|gb|EDZ37065.1| protein GntY [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|206710554|emb|CAR34912.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224469834|gb|ACN47664.1| hypothetical protein SPC_3581 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261248666|emb|CBG26504.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267995733|gb|ACY90618.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160054|emb|CBW19573.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914535|dbj|BAJ38509.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320087927|emb|CBY97689.1| Fe/S biogenesis protein nfuA [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321226562|gb|EFX51612.1| NfuA Fe-S protein maturation [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322614115|gb|EFY11051.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618007|gb|EFY14900.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625379|gb|EFY22205.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322629844|gb|EFY26617.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322632267|gb|EFY29018.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322636382|gb|EFY33089.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322643238|gb|EFY39807.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322644760|gb|EFY41296.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322651215|gb|EFY47599.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322654917|gb|EFY51232.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322659174|gb|EFY55426.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663125|gb|EFY59329.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322668611|gb|EFY64764.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322674585|gb|EFY70678.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322678209|gb|EFY74270.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682534|gb|EFY78555.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322684247|gb|EFY80253.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322716501|gb|EFZ08072.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323131871|gb|ADX19301.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323192198|gb|EFZ77430.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196376|gb|EFZ81528.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323201823|gb|EFZ86886.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323206365|gb|EFZ91326.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323211958|gb|EFZ96785.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323216864|gb|EGA01587.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222263|gb|EGA06646.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323224278|gb|EGA08567.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323228206|gb|EGA12337.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233527|gb|EGA17620.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323237011|gb|EGA21078.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323243774|gb|EGA27790.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323245984|gb|EGA29971.1| Fe/S biogenesis protein NfuA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323250760|gb|EGA34638.1| Fe/S biogenesis protein NfuA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323255771|gb|EGA39521.1| Fe/S biogenesis protein NfuA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261371|gb|EGA44957.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323267656|gb|EGA51138.1| Fe/S biogenesis protein NfuA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323268536|gb|EGA52003.1| Fe/S biogenesis protein NfuA [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326625252|gb|EGE31597.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326630011|gb|EGE36354.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332990363|gb|AEF09346.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 191
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ +L
Sbjct: 3 RISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDLLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ L +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYALQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ L + PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRD 179
>gi|16762776|ref|NP_458393.1| DNA uptake protein [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|29144263|ref|NP_807605.1| DNA uptake protein [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|213023194|ref|ZP_03337641.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213420971|ref|ZP_03354037.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213612531|ref|ZP_03370357.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213647818|ref|ZP_03377871.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|51701440|sp|Q8Z223|NFUA_SALTI RecName: Full=Fe/S biogenesis protein nfuA
gi|25356753|pir||AC0997 conserved hypothetical protein STY4285 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16505082|emb|CAD08103.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139900|gb|AAO71465.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 191
Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ +L
Sbjct: 3 RISDAAQAHFAKLLANQKEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDLLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ L +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYALQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ L + PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRD 179
>gi|253987620|ref|YP_003038976.1| DNA uptake protein [Photorhabdus asymbiotica subsp. asymbiotica
ATCC 43949]
gi|253779070|emb|CAQ82230.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 191
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 70/179 (39%), Gaps = 15/179 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 4 ITEAAQAHFAKLLANQEPGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFEKLSA 63
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
++ + P + + D D +GS + D+ +V+R++ VL +++
Sbjct: 64 YVDELSA--PFLEEAEI-DFVTDQLGSQLTLKAPNAKMRKVSDDAPLVERVEYVLQSQIN 120
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ L + PE+K ++
Sbjct: 121 PQLAGHGGRVSLMEITDEGFAILQFGGGCNGCSMVDVTLKEGIEKELLNMFPELKGVKD 179
>gi|218702159|ref|YP_002409788.1| putative DNA uptake protein [Escherichia coli IAI39]
gi|254767298|sp|B7NMH9|NFUA_ECO7I RecName: Full=Fe/S biogenesis protein nfuA
gi|218372145|emb|CAR20007.1| putative gluconate transport associated protein [Escherichia coli
IAI39]
Length = 191
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ +L
Sbjct: 3 RISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDLLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYMLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + DG L G C+ C TLK G+ L + PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITEDGYAILQFGGGCNSCSMVDVTLKEGIEKQLLNEFPELKGVRD 179
>gi|222035115|emb|CAP77860.1| Protein gntY [Escherichia coli LF82]
Length = 191
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ +L
Sbjct: 3 RISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDLLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYMLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + G L G C+GC TLK G+ L + PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITEGGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRD 179
>gi|307132919|ref|YP_003884935.1| Fe-S biogenesis protein [Dickeya dadantii 3937]
gi|306530448|gb|ADN00379.1| Fe-S biogenesis protein [Dickeya dadantii 3937]
Length = 191
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 69/172 (40%), Gaps = 15/172 (8%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
HF+ + R+F I PG + G + + + L+ L ++ +
Sbjct: 11 HFAKLLAKQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEPNDTELKFEKLSAYVDELST 70
Query: 88 GDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVRPAVARDG 137
P + + + D D +GS + D+ +++R++ VL +++ P +A G
Sbjct: 71 --PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVGDDAPLMERVEYVLQSQINPQLAGHG 127
Query: 138 GDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
G + +G L G C+GC TLK G+ L PE+ +R
Sbjct: 128 GRVTLMEITEEGYAILQFGGGCNGCSMVDYTLKEGIEKELLQKFPELTGVRD 179
>gi|251787885|ref|YP_003002606.1| putative DNA uptake protein [Dickeya zeae Ech1591]
gi|247536506|gb|ACT05127.1| IscR-regulated protein YhgI [Dickeya zeae Ech1591]
Length = 191
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 15/172 (8%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
HF+ + R+F I PG + G + + + L+ L ++ +
Sbjct: 11 HFAKLLVKQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEPNDTELKFEKLSAYVDELSA 70
Query: 88 GDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVRPAVARDG 137
P + + D D +GS + D+ +++R++ VL +++ P +A G
Sbjct: 71 --PYLEEAEI-DFVTDQLGSQLTLKAPNAKMRKVGDDAPLMERVEYVLQSQINPQLAGHG 127
Query: 138 GDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
G + +G L G C+GC TLK G+ L PE+K +R
Sbjct: 128 GRVTLMEITEEGYAILQFGGGCNGCSMVDYTLKEGIEKELLQKFPELKGVRD 179
>gi|296105108|ref|YP_003615254.1| putative DNA uptake protein [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295059567|gb|ADF64305.1| putative DNA uptake protein [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 191
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 3 RISDSAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDQLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVSDDAPLMERVEYLLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ L + PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRD 179
>gi|237728733|ref|ZP_04559214.1| Fe/S biogenesis protein nfuA [Citrobacter sp. 30_2]
gi|226909355|gb|EEH95273.1| Fe/S biogenesis protein nfuA [Citrobacter sp. 30_2]
Length = 191
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 71/179 (39%), Gaps = 15/179 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ + R+F I PG + G + + ++ +L
Sbjct: 4 ISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTAIKFDLLTA 63
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 64 YVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYMLQSQIN 120
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ L PE+K +R
Sbjct: 121 PQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLKEGIEKQLLAEFPELKGVRD 179
>gi|283787951|ref|YP_003367816.1| competence protein [Citrobacter rodentium ICC168]
gi|282951405|emb|CBG91104.1| putative competence protein [Citrobacter rodentium ICC168]
Length = 191
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 72/180 (40%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ +L
Sbjct: 3 RISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDLLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 63 AYVDELSA--PFLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYMLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ L + PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRD 179
>gi|154343762|ref|XP_001567825.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134065159|emb|CAM40585.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 431
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 68 YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDN 127
DW L+ V ++ +H SG+P + + + D + DS +V IKE++
Sbjct: 222 TDWSELKFHVSALLTDHICSGNPHV-DPNAPNPHADTVAEA----GDSEIVLMIKELVAT 276
Query: 128 RVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
+RP + DGGD+ F G+ G + + + GAC C ++ L + H++PEVK
Sbjct: 277 TIRPQLQEDGGDLRFVGFDPVLGDMRVELLGACRTCKNSKTALVDLIERTTRHWIPEVKA 336
Query: 186 IRTV 189
++ V
Sbjct: 337 VKEV 340
Score = 47.9 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIH--FSNAKEAEISPLASRIFS-IPGIASVYFG 57
+F++ + TPN A KF + + H N + +SPLA + +P + V G
Sbjct: 48 VFVRFQPTPNDACYKFYVDHMQFLPPHAHTMLFNRTNSYLSPLAHALLEALPMVEEVTVG 107
Query: 58 YDFITVGKDQYDWEH 72
F+TV + +
Sbjct: 108 ASFVTVKRVEVADTE 122
>gi|127511040|ref|YP_001092237.1| putative DNA uptake protein [Shewanella loihica PV-4]
gi|150383448|sp|A3Q930|NFUA_SHELP RecName: Full=Fe/S biogenesis protein nfuA
gi|126636335|gb|ABO21978.1| HesB/YadR/YfhF-family protein [Shewanella loihica PV-4]
Length = 192
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F I PG S G + D + + + G
Sbjct: 3 TISDAAQAHFVKLLADQPEGTHIRVFVISPGTPSAECGVSYCPP--DAVEADDIELEFNG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
P + + + D D +GS +++D+ + +RI+ V+ + +
Sbjct: 61 FHAMVDEKSAPFLEDASI-DFVTDQLGSQLTLKAPNAKMRKVDADAPLKERIEYVIQSEI 119
Query: 130 RPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIR 187
P +A GG+I+ + GI L G C+GC TLK G+ L P E+ +R
Sbjct: 120 NPQLASHGGNIMLVDIDEAGIAILQFGGGCNGCSMVDVTLKDGIEKQLLDMFPGELTGVR 179
Query: 188 TV 189
V
Sbjct: 180 DV 181
>gi|322830955|ref|YP_004210982.1| IscR-regulated protein YhgI [Rahnella sp. Y9602]
gi|321166156|gb|ADW71855.1| IscR-regulated protein YhgI [Rahnella sp. Y9602]
Length = 191
Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 15/172 (8%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
HF+ ++ R+F I PG + G + + L+ L ++ +
Sbjct: 11 HFAKLLASQEEGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFEKLSAFIDELSA 70
Query: 88 GDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVRPAVARDG 137
P + + + D D +GS + D+ +++R++ L +++ P +A G
Sbjct: 71 --PYLQDAVI-DFVTDQLGSQLTLKAPNAKMRKVSDDAPLMERVEYQLQSQINPQLASHG 127
Query: 138 GDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
G + DGI L G C+GC TLK G+ L PE+K +R
Sbjct: 128 GRVSLMEITDDGIAILQFGGGCNGCSMIDVTLKDGIEKELLQNFPELKGVRD 179
>gi|56415426|ref|YP_152501.1| DNA uptake protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197364356|ref|YP_002143993.1| DNA uptake protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|81361710|sp|Q5PLY6|NFUA_SALPA RecName: Full=Fe/S biogenesis protein nfuA
gi|254767324|sp|B5BHG9|NFUA_SALPK RecName: Full=Fe/S biogenesis protein nfuA
gi|56129683|gb|AAV79189.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197095833|emb|CAR61406.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 191
Score = 117 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ +L
Sbjct: 3 RISDAAQAHFAKLLANQEEGTQIRVFVINPGAPNAECGVSYCPPDAVEATDTALKFDLLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ L +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYALQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ L + PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRD 179
>gi|283835809|ref|ZP_06355550.1| hypothetical protein CIT292_10204 [Citrobacter youngae ATCC 29220]
gi|291067975|gb|EFE06084.1| IscR-regulated protein YhgI [Citrobacter youngae ATCC 29220]
Length = 191
Score = 117 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 71/179 (39%), Gaps = 15/179 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ + R+F I PG + G + + ++ +L
Sbjct: 4 ISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTAIKFDLLTA 63
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 64 YVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYMLQSQIN 120
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ L PE+K +R
Sbjct: 121 PQLAGHGGRVSLMEITDEGFAILQFGGGCNGCSMVDVTLKEGIEKQLLAEFPELKGVRD 179
>gi|226314372|ref|YP_002774268.1| iron-sulfur cluster assembly protein [Brevibacillus brevis NBRC
100599]
gi|226097322|dbj|BAH45764.1| putative iron-sulfur cluster assembly protein [Brevibacillus brevis
NBRC 100599]
Length = 89
Score = 117 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSA 164
+ E + ++ +++EVLD ++RP + RDGGD+ DGIV L + GAC CPS+
Sbjct: 5 KERLERSECNMDIMDQVQEVLD-KLRPYLQRDGGDVQLVDVEDGIVKLRLMGACGSCPSS 63
Query: 165 SETLKYGVANILNHFVPEVKDIRTV 189
+ TLK G+ L +P +K+++ V
Sbjct: 64 TITLKAGIERALVEEIPGIKEVQQV 88
>gi|253690287|ref|YP_003019477.1| IscR-regulated protein YhgI [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259511744|sp|C6DH68|NFUA_PECCP RecName: Full=Fe/S biogenesis protein nfuA
gi|251756865|gb|ACT14941.1| IscR-regulated protein YhgI [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 191
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 69/172 (40%), Gaps = 15/172 (8%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
HF + R+F I PG + G + + L+ + ++ +
Sbjct: 11 HFLKLLAKQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEASDTVLKFEKISAYVDELSA 70
Query: 88 GDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVRPAVARDG 137
P + + + D D +GS ++ + +++R++ VL +++ P +A G
Sbjct: 71 --PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVDDSAPLMERVEYVLQSQINPQLAGHG 127
Query: 138 GDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
G + DG+ L G C+GC TLK G+ L PE+K +R
Sbjct: 128 GRVTLMEITDDGMAILQFGGGCNGCSMVDYTLKEGIEKELLEKFPELKGVRD 179
>gi|212637526|ref|YP_002314051.1| putative DNA uptake protein [Shewanella piezotolerans WP3]
gi|254767327|sp|B8CUY8|NFUA_SHEPW RecName: Full=Fe/S biogenesis protein nfuA
gi|212559010|gb|ACJ31464.1| HesB/YadR/YfhF:Nitrogen-fixing NifU [Shewanella piezotolerans WP3]
Length = 192
Score = 117 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 43/182 (23%), Positives = 68/182 (37%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF N + R+F I PG A G + D + + G
Sbjct: 3 TISETAQAHFVNLLSDQPEGTHIRVFVISPGTAQAECGVSYCPP--DAVEADDTELEFNG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
P + + D D +GS + D+ +V+RI+ V+ + +
Sbjct: 61 FNAMVDEKSAPFLEEATI-DFVTDQLGSQLTLKAPNAKMRKVSGDAPLVERIEYVIQSEI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIR 187
P +A GG+I+ DGI L G C+GC TLK G+ L P E+ ++
Sbjct: 120 NPQLASHGGNIMLVEITEDGIAVLQFGGGCNGCSMVDVTLKDGIEKQLLDMFPGELTGVK 179
Query: 188 TV 189
V
Sbjct: 180 DV 181
>gi|227112203|ref|ZP_03825859.1| putative DNA uptake protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 191
Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 15/172 (8%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
HF + R+F I PG + G + + L+ + ++ +
Sbjct: 11 HFLKLLAKQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEASDTVLKFEKISAYVDELSA 70
Query: 88 GDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVRPAVARDG 137
P + + + D D +GS ++ ++ +++R++ VL +++ P +A G
Sbjct: 71 --PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVDDNAPLMERVEYVLQSQINPQLAGHG 127
Query: 138 GDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
G + DG+ L G C+GC TLK G+ L PE+K +R
Sbjct: 128 GRVTLMEITDDGLAILQFGGGCNGCSMVDVTLKEGIEKELLQTFPELKGVRD 179
>gi|152972292|ref|YP_001337438.1| putative DNA uptake protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|206576923|ref|YP_002236213.1| IscR-regulated protein YhgI [Klebsiella pneumoniae 342]
gi|238896881|ref|YP_002921626.1| putative DNA uptake protein [Klebsiella pneumoniae NTUH-K2044]
gi|262045250|ref|ZP_06018276.1| Fe/S-biogenesis protein NfuA [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|288933201|ref|YP_003437260.1| IscR-regulated protein YhgI [Klebsiella variicola At-22]
gi|290512005|ref|ZP_06551373.1| IscR-regulated protein YhgI [Klebsiella sp. 1_1_55]
gi|330012478|ref|ZP_08307392.1| IscR-regulated protein YhgI [Klebsiella sp. MS 92-3]
gi|166990527|sp|A6TF37|NFUA_KLEP7 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767307|sp|B5XTS2|NFUA_KLEP3 RecName: Full=Fe/S biogenesis protein nfuA
gi|150957141|gb|ABR79171.1| membrane-bound protein in GNT I transport system [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206565981|gb|ACI07757.1| IscR-regulated protein YhgI [Klebsiella pneumoniae 342]
gi|238549208|dbj|BAH65559.1| membrane-bound protein in GNT I transport system [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|259037460|gb|EEW38705.1| Fe/S-biogenesis protein NfuA [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|288887930|gb|ADC56248.1| IscR-regulated protein YhgI [Klebsiella variicola At-22]
gi|289775795|gb|EFD83795.1| IscR-regulated protein YhgI [Klebsiella sp. 1_1_55]
gi|328533829|gb|EGF60508.1| IscR-regulated protein YhgI [Klebsiella sp. MS 92-3]
Length = 191
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 72/180 (40%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 3 RISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEDTDTALKFEQLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVSDDAPLMERVEYLLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + DG+ L G C+GC TLK G+ L + PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITDDGLAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRD 179
>gi|227327615|ref|ZP_03831639.1| putative DNA uptake protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 191
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 70/172 (40%), Gaps = 15/172 (8%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
HF + R+F I PG + G + + L+ + ++ +
Sbjct: 11 HFLKLLAKQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEASDTVLKFEKISAYVDELSA 70
Query: 88 GDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVRPAVARDG 137
P + + + D D +GS ++ ++ +++R++ VL +++ P +A G
Sbjct: 71 --PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVDDNAPLMERVEYVLQSQINPQLAGHG 127
Query: 138 GDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
G + DG+ L G C+GC TLK G+ L P++K +R
Sbjct: 128 GRVTLMEITDDGLAILQFGGGCNGCSMVDVTLKEGIEKELLEKFPDLKGVRD 179
>gi|50123054|ref|YP_052221.1| putative DNA uptake protein [Pectobacterium atrosepticum SCRI1043]
gi|81643699|sp|Q6CZL7|NFUA_ERWCT RecName: Full=Fe/S biogenesis protein nfuA
gi|49613580|emb|CAG77031.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 191
Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 69/172 (40%), Gaps = 15/172 (8%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
HF + R+F I PG + G + + ++ + ++ S
Sbjct: 11 HFLKLLAKQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEASDTVVKFEKISAYVDELSS 70
Query: 88 GDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVRPAVARDG 137
P + + + D D +GS ++ + +++R++ VL +++ P +A G
Sbjct: 71 --PYLEDADI-DFVTDQLGSQLTLKAPNAKMRKVDDSAPLMERVEYVLQSQINPQLAGHG 127
Query: 138 GDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
G + DG+ L G C+GC TLK G+ L PE+K +R
Sbjct: 128 GRVTLMEITDDGLAILQFGGGCNGCSMVDFTLKEGIEKELLEKFPELKGVRD 179
>gi|221135019|ref|ZP_03561322.1| putative DNA uptake protein [Glaciecola sp. HTCC2999]
Length = 192
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 64/179 (35%), Gaps = 14/179 (7%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF + + R+F + PG ++ G + T D + +R P G
Sbjct: 4 ISETAQAHFVKLLKNQEDNTNIRVFVVNPGTSTAECGVSYCTP--DAVEATDIRLPFNGF 61
Query: 81 IMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVRP 131
P + + + I D+ ++ R++ ++ + P
Sbjct: 62 DAVVDQESAPFLEEAEIDFVTDQMGSQLTLKAPNAKARKIADDAPLIDRVEYLIQTEINP 121
Query: 132 AVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
+A G + G DGI L G C+GC TLK G+ +L F E+ +R
Sbjct: 122 QLANHNGQVTLTGITDDGIAILQFGGGCNGCSMVDVTLKDGIEKQMLEQFAGELTGVRD 180
>gi|270264449|ref|ZP_06192715.1| Fe/S biogenesis protein NfuA [Serratia odorifera 4Rx13]
gi|270041585|gb|EFA14683.1| Fe/S biogenesis protein NfuA [Serratia odorifera 4Rx13]
Length = 191
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 70/180 (38%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 3 RITDTAQEHFAKLLANQEEGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFEKLS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D +GS ++ ++ +++R++ VL +++
Sbjct: 63 AYIDEIS--KPYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVDDNAPLMERVEYVLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + D + L G C+GC TLK G+ L PE+K +R
Sbjct: 120 NPQLAGHGGRVTLMEITDDSLAILQFGGGCNGCSMVDVTLKEGIEKELLQKFPELKGVRD 179
>gi|157372866|ref|YP_001480855.1| putative DNA uptake protein [Serratia proteamaculans 568]
gi|166990528|sp|A8GKT7|NFUA_SERP5 RecName: Full=Fe/S biogenesis protein nfuA
gi|157324630|gb|ABV43727.1| HesB/YadR/YfhF-family protein [Serratia proteamaculans 568]
Length = 191
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 70/180 (38%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 3 RITDTAQEHFAKLLANQEEGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFEKLS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D +GS ++ ++ +++R++ VL +++
Sbjct: 63 AYIDELS--KPYLDDAEI-DFVTDQLGSQLTLKAPNAKMRKVDDNAPLMERVEYVLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + D + L G C+GC TLK G+ L PE+K +R
Sbjct: 120 NPQLAGHGGRVTLMEITDDSLAILQFGGGCNGCSMVDVTLKEGIEKELLQKFPELKGVRD 179
>gi|292489916|ref|YP_003532806.1| protein gntY [Erwinia amylovora CFBP1430]
gi|292900951|ref|YP_003540320.1| Fe-S protein [Erwinia amylovora ATCC 49946]
gi|291200799|emb|CBJ47933.1| putative Fe-S protein [Erwinia amylovora ATCC 49946]
gi|291555353|emb|CBA23723.1| Protein gntY [Erwinia amylovora CFBP1430]
gi|312174100|emb|CBX82353.1| Protein gntY [Erwinia amylovora ATCC BAA-2158]
Length = 191
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 70/179 (39%), Gaps = 15/179 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 4 ITDSAQEHFAKLLSKQEDGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFDKLSA 63
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
++ + P + + + D D++GS + D+ +++R++ +L ++
Sbjct: 64 FVDELSA--PYLQDAEI-DFVTDNLGSQLTLKAPNAKMRKVSDDAPLIERVEYLLQAQIN 120
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + DG L G C+GC TLK G+ + PE+K +R
Sbjct: 121 PQLASHGGKVSLMEITDDGYAILQFGGGCNGCSMVDVTLKEGIEKEMLAAFPELKGVRD 179
>gi|119776634|ref|YP_929374.1| putative DNA uptake protein [Shewanella amazonensis SB2B]
gi|150383447|sp|A1SBE8|NFUA_SHEAM RecName: Full=Fe/S biogenesis protein nfuA
gi|119769134|gb|ABM01705.1| YhgI protein [Shewanella amazonensis SB2B]
Length = 192
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 66/180 (36%), Gaps = 14/180 (7%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F I PG A G + D + + + G
Sbjct: 3 TISEAAQAHFVKLLADQPEGTNIRVFVISPGTAQAECGVSYCPP--DAVEDDDIELEFNG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVR 130
P + + + + + +D+++V+RI+ V+ +
Sbjct: 61 FNAMVDEKSAPFLEDASIDLVTDQLGSQLTLKAPNAKMRKVSADASLVERIEYVIQAEIN 120
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRT 188
P +A GG+I+ DG+ + G C+GC TLK G+ L P E+ ++R
Sbjct: 121 PQLASHGGNILLVEVTDDGVAVIQFGGGCNGCSMVDVTLKDGIEKQLLDMFPGELTEVRD 180
>gi|329297358|ref|ZP_08254694.1| Fe/S biogenesis protein NfuA [Plautia stali symbiont]
Length = 191
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 69/178 (38%), Gaps = 15/178 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 3 RITDTAQEHFAKLLTKQEDGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFDKLS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D++GS + D+ +V+R++ +L ++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDNLGSQLTLKAPNAKMRKVSDDAPMVERVEYLLQAQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
P +A GG + +G L G C+GC TLK G+ L PE+K +
Sbjct: 120 NPQLASHGGRVSLMEITDEGYAILQFGGGCNGCSMIDVTLKDGIEKELLAAFPELKGV 177
>gi|300718787|ref|YP_003743590.1| Fe/S biogenesis protein [Erwinia billingiae Eb661]
gi|299064623|emb|CAX61743.1| Fe/S biogenesis protein [Erwinia billingiae Eb661]
Length = 191
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 68/179 (37%), Gaps = 15/179 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 4 ITDSAQEHFAKLLSKQEDGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFEKLSA 63
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
++ + P + + D D++GS ++ ++ +++R++ L +
Sbjct: 64 YIDELSA--PYLEEAEI-DFVTDNLGSQLTLKAPNAKMRKVDDNAPLIERVEYQLQATIN 120
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + DG L G C+GC TLK G+ L PE+K +R
Sbjct: 121 PQLASHGGKVSLMEITDDGYAILQFGGGCNGCSMVDVTLKEGIEKELLVAFPELKGVRD 179
>gi|37524219|ref|NP_927563.1| putative DNA uptake protein [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|51701988|sp|Q7N9W2|NFUA_PHOLL RecName: Full=Fe/S biogenesis protein nfuA
gi|36783642|emb|CAE12493.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 191
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 69/179 (38%), Gaps = 15/179 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 4 ITEAAQTHFAKLLANQEPGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFDQLSA 63
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
++ + P + + D D +GS + DS + +R++ VL +++
Sbjct: 64 YVDELSA--PFLEEAEI-DFVTDQLGSQLTLKAPNAKMRKVSDDSPLAERVEYVLQSQIN 120
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + DG L G C+GC TLK G+ L + PE+K ++
Sbjct: 121 PQLAGHGGRVSLMEITDDGFAILQFGGGCNGCSMVDVTLKEGIEKELLNMFPELKGVKD 179
>gi|290473229|ref|YP_003466094.1| Fe/S biogenesis protein [Xenorhabdus bovienii SS-2004]
gi|289172527|emb|CBJ79294.1| Fe/S biogenesis protein [Xenorhabdus bovienii SS-2004]
Length = 191
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 15/179 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ ++ R+F I PG + G + + L+ +
Sbjct: 4 ITEAAQAHFAKLLASQEPGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFDQISA 63
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE----------SDSAVVQRIKEVLDNRVR 130
++ + P + + D D +GS ++ D+ +++R++ VL +++
Sbjct: 64 YVDEISA--PFLAEAVI-DFVTDQLGSQLTLKAPNAKMRKVTDDAPLIERVEYVLQSQIN 120
Query: 131 PAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + D G L G C+GC TLK G+ L + PE+K +R
Sbjct: 121 PQLAGHGGRVSLMEITDAGYAILQFGGGCNGCSMVDVTLKEGIEKELLNMFPELKGVRD 179
>gi|261823348|ref|YP_003261454.1| DNA uptake protein [Pectobacterium wasabiae WPP163]
gi|261607361|gb|ACX89847.1| IscR-regulated protein YhgI [Pectobacterium wasabiae WPP163]
Length = 191
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 69/172 (40%), Gaps = 15/172 (8%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
HF + R+F I PG + G + + L+ + ++ +
Sbjct: 11 HFLKLLAKQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEASDTVLKFEKISAYVDELSA 70
Query: 88 GDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVRPAVARDG 137
P + + + D D +GS ++ + +++R++ VL +++ P +A G
Sbjct: 71 --PYLEDADI-DFVTDQLGSQLTLKAPNAKMRKVDDSAPLMERVEYVLQSQINPQLAGHG 127
Query: 138 GDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
G + DG+ L G C+GC TLK G+ L PE+K +R
Sbjct: 128 GRVTLMEITDDGLAILQFGGGCNGCSMVDVTLKEGIEKELLQTFPELKGVRD 179
>gi|332141688|ref|YP_004427426.1| Fe/S biogenesis protein NfuA [Alteromonas macleodii str. 'Deep
ecotype']
gi|332143387|ref|YP_004429125.1| Fe/S biogenesis protein NfuA [Alteromonas macleodii str. 'Deep
ecotype']
gi|254767290|sp|B4S1U9|NFUA_ALTMD RecName: Full=Fe/S biogenesis protein nfuA
gi|327551710|gb|AEA98428.1| Fe/S biogenesis protein NfuA [Alteromonas macleodii str. 'Deep
ecotype']
gi|327553409|gb|AEB00128.1| Fe/S biogenesis protein NfuA [Alteromonas macleodii str. 'Deep
ecotype']
Length = 192
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 64/180 (35%), Gaps = 14/180 (7%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ E HF + S R+F + PG +S G + D + R G
Sbjct: 3 TISEEAQAHFVKLLSKQESGTNIRVFVVNPGTSSAECGVSYCPP--DAVEETDTRLTFNG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVR 130
P + + + + D+ +++RI ++++ +
Sbjct: 61 FDAVVDEESAPYLDEAEIDYVTDQMGSQLTLKAPNAKARKVSDDAPLIERINYMIESEIN 120
Query: 131 PAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
P +A GG +V DG L G C+GC TLK G+ +L F E+ +R
Sbjct: 121 PQLANHGGQVVLTELTDDGYAVLQFGGGCNGCSMVDVTLKDGIEKQMLEQFAGELNGVRD 180
>gi|311277652|ref|YP_003939883.1| IscR-regulated protein YhgI [Enterobacter cloacae SCF1]
gi|308746847|gb|ADO46599.1| IscR-regulated protein YhgI [Enterobacter cloacae SCF1]
Length = 191
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 70/180 (38%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + + L
Sbjct: 3 RISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTAMEFEQLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVSDDAPLMERVEYLLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ L + PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRD 179
>gi|188535341|ref|YP_001909138.1| putative DNA uptake protein [Erwinia tasmaniensis Et1/99]
gi|259910062|ref|YP_002650418.1| putative DNA uptake protein [Erwinia pyrifoliae Ep1/96]
gi|254767305|sp|B2VJW0|NFUA_ERWT9 RecName: Full=Fe/S biogenesis protein nfuA
gi|188030383|emb|CAO98274.1| putative membrane-bound protein GntY [Erwinia tasmaniensis Et1/99]
gi|224965684|emb|CAX57216.1| putative DNA uptake protein [Erwinia pyrifoliae Ep1/96]
gi|283480162|emb|CAY76078.1| Protein gntY [Erwinia pyrifoliae DSM 12163]
gi|310765661|gb|ADP10611.1| putative DNA uptake protein [Erwinia sp. Ejp617]
Length = 191
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 70/179 (39%), Gaps = 15/179 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 4 ITDSAQEHFAKLLSKQEDGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFDKLSA 63
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
++ + P + + + D D++GS + D+ +++R++ +L ++
Sbjct: 64 FVDELSA--PYLQDAEI-DFVTDNLGSQLTLKAPNAKMRKVSDDAPLIERVEYLLQAQIN 120
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ + PE+K +R
Sbjct: 121 PQLASHGGKVSLMEITDEGYAILQFGGGCNGCSMVDVTLKEGIEKEMLAAFPELKGVRD 179
>gi|15615981|ref|NP_244286.1| nitrogen fixation protein (NifU protein) [Bacillus halodurans
C-125]
gi|10176042|dbj|BAB07138.1| nitrogen fixation protein (NifU protein) [Bacillus halodurans
C-125]
Length = 79
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
+E+ + + +++KEVLD ++RP + RDGGD+ DGIV + + GAC CPS++ TLK
Sbjct: 1 METSTEMHEQVKEVLD-KLRPFLLRDGGDVELVDVEDGIVKVRLLGACGSCPSSTITLKA 59
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ L VP VK+I V
Sbjct: 60 GIERALLEEVPGVKEIEQV 78
>gi|85060303|ref|YP_456005.1| putative DNA uptake protein [Sodalis glossinidius str. 'morsitans']
gi|119370620|sp|Q2NQH5|NFUA_SODGM RecName: Full=Fe/S biogenesis protein nfuA
gi|84780823|dbj|BAE75600.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 191
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 69/172 (40%), Gaps = 15/172 (8%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
HF+ + R+F I PG + G + + L+ + ++ +
Sbjct: 11 HFAKLLSNQEPGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTELKFDKISAYVDELSA 70
Query: 88 GDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVRPAVARDG 137
P + + + D D +GS + ++ +++R++ +L +++ P +A G
Sbjct: 71 --PYLQDAEI-DFVTDKLGSQLTLKAPNAKMRKVSDEAPLIERVEYLLQSQINPQLAGHG 127
Query: 138 GDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
G + D + L G C+GC TLK G+ L PE+K +R
Sbjct: 128 GQVTLMEITDDMLAILQFGGGCNGCSMVDYTLKEGIEKELLEKFPELKGVRD 179
>gi|238765194|ref|ZP_04626125.1| Fe/S bioproteinsis protein nfuA [Yersinia kristensenii ATCC 33638]
gi|238696577|gb|EEP89363.1| Fe/S bioproteinsis protein nfuA [Yersinia kristensenii ATCC 33638]
Length = 191
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 70/180 (38%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 3 TITDTAQSHFAKLLANQEEGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFEQLS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D +GS ++ ++ +++R++ VL +++
Sbjct: 63 AYIDELS--KPYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVDDNAPLMERVEYVLQSQI 119
Query: 130 RPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + D + L G C+GC TLK G+ L PE+K +R
Sbjct: 120 NPQLAGHGGRVTLMEITPDALAILQFGGGCNGCSMVDVTLKEGIEKELLQKFPELKGVRD 179
>gi|198414946|ref|XP_002131248.1| PREDICTED: similar to NFU1 iron-sulfur cluster scaffold homolog
(HIRA-interacting protein 5) [Ciona intestinalis]
Length = 201
Score = 114 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 10/185 (5%)
Query: 14 LKFIPGQVVL---VEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKD---- 66
+ F PG VL E I + + SPL +I I GI SV I V K+
Sbjct: 1 MIFHPGCPVLHNLNEQKIKYHSRHPCYHSPLVRQIMKIDGIESVTLFTKHIHVQKNTDTL 60
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMK-LDDMGSGDFIESDSAVVQRIKEVL 125
W ++P ++ ++ F S P + + + G + I +++
Sbjct: 61 SPQWSSIKPIIVATLINFFASQLPTTTHHQSKRLHYHKESGECVAYGKLDDIEYVIDDLI 120
Query: 126 DNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEV 183
++R+RP V +GGD+++K + +G V++ + G+C P A+ + +L + VP V
Sbjct: 121 NSRIRPTVQDEGGDVIYKDFNRGNGTVYVLLLGSCLYTPKATNAITSATLLLLQYHVPCV 180
Query: 184 KDIRT 188
+
Sbjct: 181 TSVVQ 185
>gi|123444169|ref|YP_001008139.1| putative DNA uptake protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332163339|ref|YP_004299916.1| putative DNA uptake protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|150383451|sp|A1JSF6|NFUA_YERE8 RecName: Full=Fe/S biogenesis protein nfuA
gi|122091130|emb|CAL14013.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318607833|emb|CBY29331.1| nfua Fe-S protein maturation [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325667569|gb|ADZ44213.1| putative DNA uptake protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862994|emb|CBX73127.1| Fe/S biogenesis protein nfuA [Yersinia enterocolitica W22703]
Length = 191
Score = 114 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 70/180 (38%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 3 TITDAAQSHFAKLLANQEEGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFEQLS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D +GS ++ ++ +++R++ VL +++
Sbjct: 63 AYIDELS--KPYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVDDNAPLMERVEYVLQSQI 119
Query: 130 RPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + D + L G C+GC TLK G+ L PE+K +R
Sbjct: 120 NPQLAGHGGRVTLMEITPDALAILQFGGGCNGCSMVDVTLKEGIEKELLQKFPELKGVRD 179
>gi|188025400|ref|ZP_02958487.2| hypothetical protein PROSTU_00225 [Providencia stuartii ATCC 25827]
gi|188023649|gb|EDU61689.1| hypothetical protein PROSTU_00225 [Providencia stuartii ATCC 25827]
Length = 194
Score = 114 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 16/180 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ E + R+F I PG S G + + + L+ L
Sbjct: 6 ITEAAQAHFAKLLENQEPGTQIRVFVINPGTPSAECGVSYCPPDAVEATDQELKFERLSA 65
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
++ + P + + + D D +GS + D+ +++R++ VL +++
Sbjct: 66 YVDEISA--PFLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVSDDAPLIERVEYVLQSQIN 122
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
P +A GG + DG L G C+GC TLK G+ +L F E+K ++
Sbjct: 123 PQLASHGGRVSLMEITDDGFAILQFGGGCNGCSMVDVTLKEGIEKELLKMFEGELKGVKD 182
>gi|300725234|ref|YP_003714562.1| Fe/S biogenesis protein [Xenorhabdus nematophila ATCC 19061]
gi|297631779|emb|CBJ92498.1| Fe/S biogenesis protein [Xenorhabdus nematophila ATCC 19061]
Length = 191
Score = 114 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 15/179 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 4 ITEAAQAHFAKLLANQEPGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFDQLSA 63
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
++ + P + + D D +GS ++ D+ ++ R++ VL +++
Sbjct: 64 YVDEVSA--PFLEEAVI-DFVTDQLGSQLTLKAPNAKMRKVDDDAPLIDRVEYVLQSQIN 120
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ L PE+ ++
Sbjct: 121 PQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLKEGIEKQLLQVFPELTGVKD 179
>gi|212711654|ref|ZP_03319782.1| hypothetical protein PROVALCAL_02729 [Providencia alcalifaciens DSM
30120]
gi|212685756|gb|EEB45284.1| hypothetical protein PROVALCAL_02729 [Providencia alcalifaciens DSM
30120]
Length = 192
Score = 114 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 16/180 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ E++ S R+F I PG + G + G + + L+ L
Sbjct: 4 ITEAAQTHFAKLLESQESGTQIRVFVINPGTPTAECGVSYCPPGAVEATDKELKFEKLSA 63
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
++ + P + + + D D +GS + D+ +++R++ VL +++
Sbjct: 64 YVDEISA--PFLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVSDDAPLIERVEYVLQSQIN 120
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ +L F E+K ++
Sbjct: 121 PQLASHGGRVSLMEITEEGFAILQFGGGCNGCSMVDVTLKEGIEKELLKMFEGELKGVKD 180
>gi|22127773|ref|NP_671196.1| putative DNA uptake protein [Yersinia pestis KIM 10]
gi|45439990|ref|NP_991529.1| putative DNA uptake protein [Yersinia pestis biovar Microtus str.
91001]
gi|51598063|ref|YP_072254.1| DNA uptake protein [Yersinia pseudotuberculosis IP 32953]
gi|108809333|ref|YP_653249.1| putative DNA uptake protein [Yersinia pestis Antiqua]
gi|108814098|ref|YP_649865.1| putative DNA uptake protein [Yersinia pestis Nepal516]
gi|145597377|ref|YP_001161452.1| putative DNA uptake protein [Yersinia pestis Pestoides F]
gi|150260809|ref|ZP_01917537.1| predicted gluconate transport associated protein [Yersinia pestis
CA88-4125]
gi|153947285|ref|YP_001402938.1| DNA uptake protein [Yersinia pseudotuberculosis IP 31758]
gi|162421404|ref|YP_001608065.1| putative DNA uptake protein [Yersinia pestis Angola]
gi|165928048|ref|ZP_02223880.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165936266|ref|ZP_02224835.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|166010431|ref|ZP_02231329.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166214579|ref|ZP_02240614.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167399248|ref|ZP_02304772.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167419001|ref|ZP_02310754.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167426539|ref|ZP_02318292.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167468684|ref|ZP_02333388.1| hesB-like domain/nifU-like domain protein [Yersinia pestis FV-1]
gi|170022424|ref|YP_001718929.1| putative DNA uptake protein [Yersinia pseudotuberculosis YPIII]
gi|186897263|ref|YP_001874375.1| putative DNA uptake protein [Yersinia pseudotuberculosis PB1/+]
gi|218927338|ref|YP_002345213.1| putative DNA uptake protein [Yersinia pestis CO92]
gi|229836393|ref|ZP_04456560.1| predicted gluconate transport associated protein [Yersinia pestis
Pestoides A]
gi|229839982|ref|ZP_04460141.1| predicted gluconate transport associated protein [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229842063|ref|ZP_04462218.1| predicted gluconate transport associated protein [Yersinia pestis
biovar Orientalis str. India 195]
gi|229904636|ref|ZP_04519747.1| predicted gluconate transport associated protein [Yersinia pestis
Nepal516]
gi|270488149|ref|ZP_06205223.1| IscR-regulated protein YhgI [Yersinia pestis KIM D27]
gi|294502220|ref|YP_003566282.1| hypothetical protein YPZ3_0110 [Yersinia pestis Z176003]
gi|51702126|sp|Q8ZJI0|NFUA_YERPE RecName: Full=Fe/S biogenesis protein nfuA
gi|81638196|sp|Q664J6|NFUA_YERPS RecName: Full=Fe/S biogenesis protein nfuA
gi|119370621|sp|Q1C2L8|NFUA_YERPA RecName: Full=Fe/S biogenesis protein nfuA
gi|119370622|sp|Q1CCL5|NFUA_YERPN RecName: Full=Fe/S biogenesis protein nfuA
gi|166990533|sp|A7FNW0|NFUA_YERP3 RecName: Full=Fe/S biogenesis protein nfuA
gi|166990534|sp|A4TGR7|NFUA_YERPP RecName: Full=Fe/S biogenesis protein nfuA
gi|254767339|sp|B2K5V9|NFUA_YERPB RecName: Full=Fe/S biogenesis protein nfuA
gi|254767340|sp|A9R4D2|NFUA_YERPG RecName: Full=Fe/S biogenesis protein nfuA
gi|254767341|sp|B1JHZ3|NFUA_YERPY RecName: Full=Fe/S biogenesis protein nfuA
gi|21960901|gb|AAM87447.1|AE013995_2 hypothetical protein y3903 [Yersinia pestis KIM 10]
gi|45434845|gb|AAS60406.1| Thioredoxin-like proteins and domains [Yersinia pestis biovar
Microtus str. 91001]
gi|51591345|emb|CAH23011.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
gi|108777746|gb|ABG20265.1| hypothetical protein YPN_3938 [Yersinia pestis Nepal516]
gi|108781246|gb|ABG15304.1| hypothetical protein YPA_3342 [Yersinia pestis Antiqua]
gi|115345949|emb|CAL18813.1| conserved hypothetical protein [Yersinia pestis CO92]
gi|145209073|gb|ABP38480.1| hypothetical protein YPDSF_0054 [Yersinia pestis Pestoides F]
gi|149290217|gb|EDM40294.1| predicted gluconate transport associated protein [Yersinia pestis
CA88-4125]
gi|152958780|gb|ABS46241.1| hesB-like domain/nifU-like domain protein [Yersinia
pseudotuberculosis IP 31758]
gi|162354219|gb|ABX88167.1| hesB-like domain/nifU-like domain protein [Yersinia pestis Angola]
gi|165915880|gb|EDR34488.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|165919997|gb|EDR37298.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165990521|gb|EDR42822.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166204234|gb|EDR48714.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166962995|gb|EDR59016.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167051752|gb|EDR63160.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167054527|gb|EDR64335.1| hesB-like domain/nifU-like domain protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169748958|gb|ACA66476.1| IscR-regulated protein YhgI [Yersinia pseudotuberculosis YPIII]
gi|186700289|gb|ACC90918.1| IscR-regulated protein YhgI [Yersinia pseudotuberculosis PB1/+]
gi|229678754|gb|EEO74859.1| predicted gluconate transport associated protein [Yersinia pestis
Nepal516]
gi|229690373|gb|EEO82427.1| predicted gluconate transport associated protein [Yersinia pestis
biovar Orientalis str. India 195]
gi|229696348|gb|EEO86395.1| predicted gluconate transport associated protein [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229706461|gb|EEO92468.1| predicted gluconate transport associated protein [Yersinia pestis
Pestoides A]
gi|262360299|gb|ACY57020.1| hypothetical protein YPD4_0111 [Yersinia pestis D106004]
gi|262364249|gb|ACY60806.1| hypothetical protein YPD8_0116 [Yersinia pestis D182038]
gi|270336653|gb|EFA47430.1| IscR-regulated protein YhgI [Yersinia pestis KIM D27]
gi|294352679|gb|ADE63020.1| hypothetical protein YPZ3_0110 [Yersinia pestis Z176003]
gi|320013262|gb|ADV96833.1| putative DNA uptake protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 191
Score = 114 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 65/177 (36%), Gaps = 9/177 (5%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 3 TITDAAQSHFAKLLANQEEGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFEQLS 62
Query: 80 MIME-----HFISGDPIIHNGGLGDMKLDDMGSGDFIESDS--AVVQRIKEVLDNRVRPA 132
++ + + LG + + D +++R++ VL +++ P
Sbjct: 63 AYVDELSVPYLQDAEIDFVTDQLGSQLTLKAPNAKMRKVDDSAPLMERVEYVLQSQINPQ 122
Query: 133 VARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
+A GG + +G+ L G C+GC TLK G+ L PE+K +R
Sbjct: 123 LAGHGGRVTLMEITPEGLAILQFGGGCNGCSMVDVTLKEGIEKELLQKFPELKGVRD 179
>gi|269140629|ref|YP_003297330.1| hypothetical protein ETAE_3288 [Edwardsiella tarda EIB202]
gi|294638123|ref|ZP_06716379.1| IscR-regulated protein YhgI [Edwardsiella tarda ATCC 23685]
gi|267986290|gb|ACY86119.1| hypothetical protein ETAE_3288 [Edwardsiella tarda EIB202]
gi|291088690|gb|EFE21251.1| IscR-regulated protein YhgI [Edwardsiella tarda ATCC 23685]
gi|304560415|gb|ADM43079.1| NfuA [Edwardsiella tarda FL6-60]
Length = 191
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 70/180 (38%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + + L L
Sbjct: 3 RITEAAQEHFAKLLANQEPGTQIRVFVINPGTPNAECGVSYCPPDAVEANDRKLDFEQLS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 63 AYVDEISA--PFLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLIERVEYILQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ L PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDYTLKEGIEKELLQRFPELKGVRD 179
>gi|197286755|ref|YP_002152627.1| DNA uptake protein [Proteus mirabilis HI4320]
gi|227355054|ref|ZP_03839465.1| HesB family protein [Proteus mirabilis ATCC 29906]
gi|254767308|sp|B4EZM8|NFUA_PROMH RecName: Full=Fe/S biogenesis protein nfuA
gi|194684242|emb|CAR45763.1| putative gluconate metabolism protein (putative iron-sulphur
cluster biosynthesis) [Proteus mirabilis HI4320]
gi|227164841|gb|EEI49688.1| HesB family protein [Proteus mirabilis ATCC 29906]
Length = 192
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 72/181 (39%), Gaps = 16/181 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + + ++ L
Sbjct: 3 TITDAAQAHFAKLLANQEPNTQIRVFVINPGTPNAECGVSYCPPDAVEPNDTEIKFEKLS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ VL +++
Sbjct: 63 AYVDDISA--PFLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLIERVEYVLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIR 187
P +A GG + DG L G C+GC TLK G+ L + P E+K ++
Sbjct: 120 NPQLASHGGRVSLMEITEDGYAILQFGGGCNGCSMIDVTLKDGIEKELLNLFPEELKGVK 179
Query: 188 T 188
Sbjct: 180 D 180
>gi|238788981|ref|ZP_04632771.1| Fe/S bioproteinsis protein nfuA [Yersinia frederiksenii ATCC 33641]
gi|238723008|gb|EEQ14658.1| Fe/S bioproteinsis protein nfuA [Yersinia frederiksenii ATCC 33641]
Length = 191
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 70/180 (38%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 3 TITDAAQSHFAKLLANQEEGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFEQLS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D +GS ++ ++ +++R++ VL +++
Sbjct: 63 AYVDELS--VPYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVDDNAPLMERVEYVLQSQI 119
Query: 130 RPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + D + L G C+GC TLK G+ L PE+K +R
Sbjct: 120 NPQLASHGGRVTLMEITPDALAILQFGGGCNGCSMVDVTLKEGIEKELLQKFPELKGVRD 179
>gi|157373320|ref|YP_001471920.1| putative DNA uptake protein [Shewanella sediminis HAW-EB3]
gi|189041731|sp|A8FPL9|NFUA_SHESH RecName: Full=Fe/S biogenesis protein nfuA
gi|157315694|gb|ABV34792.1| HesB/YadR/YfhF-family protein [Shewanella sediminis HAW-EB3]
Length = 192
Score = 114 bits (286), Expect = 6e-24, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 67/182 (36%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F I PG A+ G + D + + + G
Sbjct: 3 TISDAAQAHFVTLLADQPEGTHIRVFVISPGTATAECGVSYCPP--DAVEADDMEFEFNG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
P + + D D +GS + SD+ + +RI V+ + +
Sbjct: 61 FNAMVDEKSAPFLEEASI-DFVTDQLGSQLTLKAPNAKMRKVASDAPLSERIDYVIQSEI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIR 187
P +A GG+I+ +G L G C+GC TLK G+ L P E+ ++
Sbjct: 120 NPQLASHGGNIMLVEVTEEGTAILQFGGGCNGCSMVDVTLKDGIETQLLEKFPGELTGVK 179
Query: 188 TV 189
V
Sbjct: 180 DV 181
>gi|238754092|ref|ZP_04615450.1| Fe/S bioproteinsis protein nfuA [Yersinia ruckeri ATCC 29473]
gi|238707588|gb|EEP99947.1| Fe/S bioproteinsis protein nfuA [Yersinia ruckeri ATCC 29473]
Length = 191
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 64/177 (36%), Gaps = 9/177 (5%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 3 KITDAAQSHFAKLLANQEEGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFEQLS 62
Query: 80 MIME-----HFISGDPIIHNGGLGDMKLDDMGSGDFIESDS--AVVQRIKEVLDNRVRPA 132
++ + + LG + + D +++R++ VL +++ P
Sbjct: 63 AYVDELSVPYLQDAEIDFVTDQLGSQLTLKAPNAKMRKVDDSAPLMERVEYVLQSQINPQ 122
Query: 133 VARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
+A GG + D + L G C+GC TLK G+ L PE+K +R
Sbjct: 123 LAGHGGRVTLMEITDDALAILQFGGGCNGCSMVDVTLKEGIEKELLQKFPELKGVRD 179
>gi|218438992|ref|YP_002377321.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 7424]
gi|218171720|gb|ACK70453.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 7424]
Length = 81
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + +++VLD +RP + DGG++ IV L ++GAC CPS++ TLK G
Sbjct: 4 ETLPLTTENVEQVLDE-LRPYLMADGGNVELVEIDGPIVKLRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDIRT 188
+ L ++PE+ ++
Sbjct: 63 IERRLREYIPEIAEVEQ 79
>gi|238921502|ref|YP_002935017.1| DNA uptake protein [Edwardsiella ictaluri 93-146]
gi|259511742|sp|C5BGT5|NFUA_EDWI9 RecName: Full=Fe/S biogenesis protein nfuA
gi|238871071|gb|ACR70782.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 191
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 70/180 (38%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + + L L
Sbjct: 3 RITEAAQEHFAKLLANQEPGTQIRVFVINPGTPNAECGVSYCPPDAVEANDRKLDFEQLS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 63 AYVDEISA--PFLDDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLIERVEYILQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ L PE+K +R
Sbjct: 120 NPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDYTLKEGIEKELLQRFPELKGVRD 179
>gi|167622188|ref|YP_001672482.1| putative DNA uptake protein [Shewanella halifaxensis HAW-EB4]
gi|189041729|sp|B0TNS0|NFUA_SHEHH RecName: Full=Fe/S biogenesis protein nfuA
gi|167352210|gb|ABZ74823.1| HesB/YadR/YfhF-family protein [Shewanella halifaxensis HAW-EB4]
Length = 192
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 67/182 (36%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F I PG A G + D + + G
Sbjct: 3 TISETAQAHFVKLLSDQPEGTHIRVFVISPGTAQAECGVSYCPP--DAVEADDTEFEFNG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
P + + D D +GS + D+++ +RI+ V+ + +
Sbjct: 61 FNAMVDEKSAPFLEEATI-DFVTDQLGSQLTLKAPNAKMRKVSDDASLSERIEYVIQSEI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIR 187
P +A GG+I+ +GI L G C+GC TLK G+ L P E+ ++
Sbjct: 120 NPQLASHGGNIMLVEITEEGIAVLQFGGGCNGCSMVDVTLKDGIEKQLLEMFPSELTGVK 179
Query: 188 TV 189
V
Sbjct: 180 DV 181
>gi|307153189|ref|YP_003888573.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
7822]
gi|306983417|gb|ADN15298.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 7822]
Length = 78
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + ++ VLD +RP + DGG++ IV L ++GAC CPS++ TLK G+
Sbjct: 2 TLALTSDNVETVLDE-MRPYLMADGGNVELVEIDGPIVKLRLQGACGSCPSSTMTLKMGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L ++PE+ ++ V
Sbjct: 61 ERRLREYIPEIVEVEQV 77
>gi|226327547|ref|ZP_03803065.1| hypothetical protein PROPEN_01418 [Proteus penneri ATCC 35198]
gi|225204073|gb|EEG86427.1| hypothetical protein PROPEN_01418 [Proteus penneri ATCC 35198]
Length = 192
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 74/180 (41%), Gaps = 16/180 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ + R+F I PG + G + + + ++ L
Sbjct: 4 ITDAAQAHFAKLLANQEPNTQIRVFVINPGTPNAECGVSYCPPDAVEPNDTEIKFEKLSA 63
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
++ + P + + + D D +GS +++D+ +++R++ VL +++
Sbjct: 64 YVDDISA--PFLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVDADAPLIERVEYVLQSQIN 120
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRT 188
P +A GG + DG L G C+GC TLK G+ L + P E+K ++
Sbjct: 121 PQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMIDVTLKDGIEKELLNQFPNELKGVKD 180
>gi|323308188|gb|EGA61437.1| Nfu1p [Saccharomyces cerevisiae FostersO]
Length = 109
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCP 162
M + E D V + I+E++D R+RPA+ DGGDI ++G+ G V+L ++GAC+ C
Sbjct: 1 MPKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCS 60
Query: 163 SASETLKYGVANILNHFVPEVKDIRTV 189
S+ TLKYG+ ++L H+V EVK++ +
Sbjct: 61 SSEVTLKYGIESMLKHYVDEVKEVIQI 87
>gi|56964703|ref|YP_176434.1| nitrogen fixation protein [Bacillus clausii KSM-K16]
gi|56910946|dbj|BAD65473.1| nitrogen fixation protein [Bacillus clausii KSM-K16]
Length = 79
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
+E+ + ++++++EVLD ++RP + RDGGD+ DG+V + + GAC CPS++ TLK
Sbjct: 1 METSTELMEQVQEVLD-KLRPFLLRDGGDVELIDVEDGVVKVRLLGACGSCPSSTITLKA 59
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ L VP + +I V
Sbjct: 60 GIERALLEEVPGITEIEQV 78
>gi|113476915|ref|YP_722976.1| nitrogen-fixing NifU-like protein [Trichodesmium erythraeum IMS101]
gi|110167963|gb|ABG52503.1| nitrogen-fixing NifU-like [Trichodesmium erythraeum IMS101]
Length = 80
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
E+ + + ++ VLD +RP +A DGG++ IV L ++GACS CPS++ TLK
Sbjct: 1 MGEAKALTNENVEIVLDE-LRPYLAADGGNVELVDIEGPIVKLRLQGACSSCPSSTMTLK 59
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ L +PE+ ++ +V
Sbjct: 60 MGIERKLREEIPEIAEVESV 79
>gi|317967928|ref|ZP_07969318.1| NifU-like protein [Synechococcus sp. CB0205]
Length = 92
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 99 DMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGAC 158
+ + + + + ++ ++ LD +RP + DGG++ IV + ++GAC
Sbjct: 2 STETPAAAATENADPRALTIENVERTLDE-LRPYLMADGGNVEVVEIDGPIVKVRLQGAC 60
Query: 159 SGCPSASETLKYGVANILNHFVPEVKDIRTV 189
CPS++ TLK G+ L +PEV ++ V
Sbjct: 61 GSCPSSTMTLKMGIERKLREAIPEVSEVVQV 91
>gi|238758685|ref|ZP_04619859.1| Fe/S bioproteinsis protein nfuA [Yersinia aldovae ATCC 35236]
gi|238702982|gb|EEP95525.1| Fe/S bioproteinsis protein nfuA [Yersinia aldovae ATCC 35236]
Length = 191
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 70/180 (38%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 3 TITDAAQSHFAKLLANQEEGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTVLKFEQLS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D +GS ++ ++ +++R++ VL +++
Sbjct: 63 AYVDELS--KPYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVDDNAPLMERVEYVLQSQI 119
Query: 130 RPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + D + L G C+GC TLK G+ L PE+K +R
Sbjct: 120 NPQLAGHGGRVTLMEITPDALAILQFGGGCNGCSMVDVTLKEGIEKELLQKFPELKGVRD 179
>gi|288553995|ref|YP_003425930.1| hypothetical protein BpOF4_04870 [Bacillus pseudofirmus OF4]
gi|288545155|gb|ADC49038.1| hypothetical protein BpOF4_04870 [Bacillus pseudofirmus OF4]
Length = 79
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
+ + + +V++++EVLD ++RP + RDGGD+ DGIV + + GAC CPS++ TLK
Sbjct: 1 MATSTEMVEQVQEVLD-KLRPFLLRDGGDVELVEVEDGIVKVRLLGACGSCPSSTITLKA 59
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ L VP VK+I V
Sbjct: 60 GIERALLEEVPGVKEIEQV 78
>gi|238751155|ref|ZP_04612650.1| Fe/S bioproteinsis protein nfuA [Yersinia rohdei ATCC 43380]
gi|238710633|gb|EEQ02856.1| Fe/S bioproteinsis protein nfuA [Yersinia rohdei ATCC 43380]
Length = 191
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 69/180 (38%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 3 TITDAAQSHFAKLLANQEEGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFEQLS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D +GS ++ + +++R++ VL +++
Sbjct: 63 AYIDELS--KPYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVDDTAPLMERVEYVLQSQI 119
Query: 130 RPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + D + L G C+GC TLK G+ L PE+K +R
Sbjct: 120 NPQLAGHGGRVTLMEITPDALAILQFGGGCNGCSMVDVTLKEGIEKELLQKFPELKGVRD 179
>gi|261344535|ref|ZP_05972179.1| IscR-regulated protein YhgI [Providencia rustigianii DSM 4541]
gi|282567449|gb|EFB72984.1| IscR-regulated protein YhgI [Providencia rustigianii DSM 4541]
Length = 192
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 16/180 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HFS E + R+F I PG + G + G + + L+ L
Sbjct: 4 ITEAAQAHFSKLLEGQEPGTQIRVFVINPGTPTAECGVSYCPPGAVEATDKELKFEKLSA 63
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
++ + P + + + D D +GS + D+ +++R++ VL +++
Sbjct: 64 YVDEISA--PFLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVSDDAPLIERVEYVLQSQIN 120
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
P +A GG + DG L G C+GC TLK G+ +L F E+K ++
Sbjct: 121 PQLAGHGGRVSLMEITEDGFAILQFGGGCNGCSMVDVTLKEGIEKELLKMFDGELKGVKD 180
>gi|295401381|ref|ZP_06811352.1| nitrogen-fixing NifU domain protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|312109659|ref|YP_003987975.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y4.1MC1]
gi|294976596|gb|EFG52203.1| nitrogen-fixing NifU domain protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|311214760|gb|ADP73364.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y4.1MC1]
Length = 78
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD + ++++EVLD ++RP + RDGGD DG+V L + GAC CPS++ TLK G+
Sbjct: 2 SDQEIKEQVQEVLD-KLRPFLLRDGGDCELIDVEDGVVKLRLLGACGSCPSSTITLKAGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L VP + ++ V
Sbjct: 61 ERALLEEVPGIVEVEQV 77
>gi|157963821|ref|YP_001503855.1| putative DNA uptake protein [Shewanella pealeana ATCC 700345]
gi|189041730|sp|A8H9T3|NFUA_SHEPA RecName: Full=Fe/S biogenesis protein nfuA
gi|157848821|gb|ABV89320.1| HesB/YadR/YfhF-family protein [Shewanella pealeana ATCC 700345]
Length = 192
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 67/182 (36%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F I PG A G + + D + G
Sbjct: 3 TISEAAQAHFVKLLSDQPEGTHIRVFVISPGTAQAECGVSYCPPDAVEADDTEI--EFNG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
P + + D D +GS + D+++ +RI+ V+ + +
Sbjct: 61 FNAMVDEKSAPFLEEATI-DFVTDQLGSQLTLKAPNAKMRKVSDDASLSERIEYVIQSEI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIR 187
P +A GG+I+ DGI L G C+GC TLK G+ L P E+ ++
Sbjct: 120 NPQLASHGGNIMLVEITEDGIAVLQFGGGCNGCSMVDVTLKDGIEKQLLDMFPGELSGVK 179
Query: 188 TV 189
V
Sbjct: 180 DV 181
>gi|304413450|ref|ZP_07394923.1| Fe/S biogenesis protein [Candidatus Regiella insecticola LSR1]
gi|304284293|gb|EFL92686.1| Fe/S biogenesis protein [Candidatus Regiella insecticola LSR1]
Length = 191
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ + HFS + + R+F I PG + G + + L+
Sbjct: 3 KITEQAQNHFSKLLANQETGTQIRVFVINPGTPTAECGVSYCPPDAIEASDTELKFDPFS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
+ ++ + P + + + D D +GS + D+ +++R++ VL +++
Sbjct: 63 VFVDQLSA--PFLVDAEI-DFITDQLGSQLTLKAPNAKMRKVADDAPLMERVEYVLQSKI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + D L G C+GC TLK G+ L PE+K ++
Sbjct: 120 NPQLASHGGRVTLMEITDDAFAVLQFGGGCNGCSMVDVTLKNGIEKELLQTFPELKGVKD 179
>gi|332968729|gb|EGK07781.1| NifU domain protein [Desmospora sp. 8437]
Length = 73
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++++EVLD ++RP + RDGGD+ DG+V + + GAC CPS++ TLK G+ L
Sbjct: 1 MKEQVQEVLD-KLRPFIQRDGGDVELVNVEDGVVKVRLLGACGSCPSSTITLKAGIERAL 59
Query: 177 NHFVPEVKDIRTV 189
+P V ++ V
Sbjct: 60 MEEIPGVTEVEQV 72
>gi|170724529|ref|YP_001758555.1| putative DNA uptake protein [Shewanella woodyi ATCC 51908]
gi|254767328|sp|B1KM47|NFUA_SHEWM RecName: Full=Fe/S biogenesis protein nfuA
gi|169809876|gb|ACA84460.1| IscR-regulated protein YhgI [Shewanella woodyi ATCC 51908]
Length = 192
Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 16/181 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF N + R+F I PG A+ G + D + + + G
Sbjct: 3 TISDAAQAHFVNLLADQPEGTHIRVFVISPGTATAECGVSYCPP--DAVEADDMELEYNG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
P + + + D D +GS + SD+++ +RI+ V+ + +
Sbjct: 61 FNAMVDEKSAPFLEDATI-DFVTDQLGSQLTLKAPNAKMRKVASDASLNERIEYVIQSEI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIR 187
P +A GG+I+ DG+ L G C+GC TLK G+ L P E+ ++
Sbjct: 120 NPQLASHGGNIMLLEVTEDGVAILQFGGGCNGCSMVDVTLKDGIEKQLLEMFPGELTGVK 179
Query: 188 T 188
Sbjct: 180 D 180
>gi|320539835|ref|ZP_08039494.1| putative iron-sulfur cluster scaffold protein [Serratia symbiotica
str. Tucson]
gi|320030021|gb|EFW12041.1| putative iron-sulfur cluster scaffold protein [Serratia symbiotica
str. Tucson]
Length = 191
Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 70/172 (40%), Gaps = 15/172 (8%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
HF+ + R+F I PG + G + + L+ L ++ +
Sbjct: 11 HFAKLLANQEIGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELQFEKLSAFVDELSA 70
Query: 88 GDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVRPAVARDG 137
P + + + D D +GS ++ ++ +++R++ +L +++ P +A G
Sbjct: 71 --PYLDDAEI-DFVTDQLGSQLTLKAPNAKMRKVDDNAPLIERVEYLLQSQINPQLAGHG 127
Query: 138 GDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
G + D + L G C+GC TLK G+ L PE+K +R
Sbjct: 128 GRVTLMEITDDNLAILQFGGGCNGCSMVDVTLKEGIEKELLLKFPELKGVRD 179
>gi|332995765|gb|AEF05820.1| Fe/S biogenesis protein NfuA [Alteromonas sp. SN2]
Length = 192
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 65/180 (36%), Gaps = 14/180 (7%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ E HF + + + R+F + PG +S G + D + R G
Sbjct: 3 TISEEAQAHFVKLLDKQETGTNIRVFVVNPGTSSAECGVSYCPP--DAVEETDTRLEFNG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVR 130
P +H + + + D+ + +RI+ +++ +
Sbjct: 61 FNAVVDEESVPFLHEAEIDYVTDQMGSQLTLKAPNAKARKVADDAPLAERIRYMIEAEIN 120
Query: 131 PAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
P +A GG ++ DG L G C+GC TLK G+ +L F E+ +R
Sbjct: 121 PQLASHGGQVMLAELTEDGFAILQFGGGCNGCSMVDVTLKDGIEKQMLEQFAGELNGVRD 180
>gi|238786223|ref|ZP_04630170.1| Fe/S bioproteinsis protein nfuA [Yersinia bercovieri ATCC 43970]
gi|238797310|ref|ZP_04640811.1| Fe/S bioproteinsis protein nfuA [Yersinia mollaretii ATCC 43969]
gi|238712864|gb|EEQ04929.1| Fe/S bioproteinsis protein nfuA [Yersinia bercovieri ATCC 43970]
gi|238718947|gb|EEQ10762.1| Fe/S bioproteinsis protein nfuA [Yersinia mollaretii ATCC 43969]
Length = 191
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 69/180 (38%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ +
Sbjct: 3 TITDAAQSHFAKLLANQEEGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTELKFEQIS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D +GS ++ + +++R++ VL +++
Sbjct: 63 AYVDELS--KPYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVDDTAPLMERVEYVLQSQI 119
Query: 130 RPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + D + L G C+GC TLK G+ L PE+K +R
Sbjct: 120 NPQLAGHGGRVTLMEITPDALAILQFGGGCNGCSMVDVTLKEGIEKELLQKFPELKGVRD 179
>gi|311031755|ref|ZP_07709845.1| NifU-like protein [Bacillus sp. m3-13]
Length = 78
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
S+ + +++EVLD ++RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 2 SNPEINAQVQEVLD-KLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L VP + ++ V
Sbjct: 61 ERALLEEVPGIIEVEQV 77
>gi|297792273|ref|XP_002864021.1| hypothetical protein ARALYDRAFT_331396 [Arabidopsis lyrata subsp.
lyrata]
gi|297309856|gb|EFH40280.1| hypothetical protein ARALYDRAFT_331396 [Arabidopsis lyrata subsp.
lyrata]
Length = 707
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD +RP + DGG++ IV + ++GAC CPS++ T+K G+ L
Sbjct: 85 TEENVESVLDE-IRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRL 143
Query: 177 NHFVPEVKDIRTV 189
+PE+ + V
Sbjct: 144 MEKIPEIVAVEAV 156
Score = 37.5 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 8/65 (12%)
Query: 119 QRIKEVLDNRVRPAVA--RDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ I++VL+ +RP + D G + D IV + + G +G T++ V L
Sbjct: 168 ENIEKVLEE-IRPYLIGTAD-GSLDLVEIEDPIVKIRITGPAAG----VMTVRVAVTQKL 221
Query: 177 NHFVP 181
+P
Sbjct: 222 REKIP 226
>gi|223993177|ref|XP_002286272.1| nifU like protein [Thalassiosira pseudonana CCMP1335]
gi|220977587|gb|EED95913.1| nifU like protein [Thalassiosira pseudonana CCMP1335]
Length = 237
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 7/151 (4%)
Query: 43 SRIFSIPGIASVY-FGY----DFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGL 97
+ + S +A+ FG+ + I++ ++ RP + I+ F + + G
Sbjct: 7 AALHSFNMLAAAMAFGHHGARNHISLSTRRHSPFSTRPQLRMTIVSPFDNTEDS-DESGE 65
Query: 98 GDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGA 157
G G E + + VL+ +RP + +DGG++ IV L ++GA
Sbjct: 66 GVATATYTSLGSDDEPLDLTWENVDMVLEE-MRPFLLQDGGNVAISEIDGPIVKLELQGA 124
Query: 158 CSGCPSASETLKYGVANILNHFVPEVKDIRT 188
C CPS+++T+K G+ L +PE++++
Sbjct: 125 CGTCPSSTQTMKMGLERKLRERIPEIQEVIQ 155
>gi|87303149|ref|ZP_01085947.1| NifU-like protein [Synechococcus sp. WH 5701]
gi|87282316|gb|EAQ74276.1| NifU-like protein [Synechococcus sp. WH 5701]
Length = 97
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 96 GLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMR 155
+ + V+ ++ VLD +RP + DGG++ V + ++
Sbjct: 4 ETATPDTSASVEAPISDPRALTVENVERVLDE-LRPYLMADGGNVEIVEIDGPTVKVRLQ 62
Query: 156 GACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
GAC CPS++ TLK G+ L +PEV ++ V
Sbjct: 63 GACGSCPSSTMTLKMGIERKLREAIPEVNEVVQV 96
>gi|291326981|ref|ZP_06126542.2| IscR-regulated protein YhgI [Providencia rettgeri DSM 1131]
gi|291312105|gb|EFE52558.1| IscR-regulated protein YhgI [Providencia rettgeri DSM 1131]
Length = 194
Score = 111 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 16/180 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ E + R+F I PG + G + G + + L+ L
Sbjct: 6 ITEAAQAHFAKLLENQEPGTQIRVFVINPGTPTAECGVSYCPPGAVEATDKELKFEKLSA 65
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
++ + P + + + D D +GS + D+ +++R++ VL +++
Sbjct: 66 YVDEISA--PFLDDAEI-DFVTDQLGSQLTLKAPNAKMRKVSDDAPLIERVEYVLQSQIN 122
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
P +A GG + +G L G C+GC TLK G+ +L F E+K ++
Sbjct: 123 PQLASHGGRVSLMEITDEGFAILQFGGGCNGCSMVDVTLKEGIEKELLKMFEGELKGVKD 182
>gi|238792866|ref|ZP_04636496.1| Fe/S bioproteinsis protein nfuA [Yersinia intermedia ATCC 29909]
gi|238727720|gb|EEQ19244.1| Fe/S bioproteinsis protein nfuA [Yersinia intermedia ATCC 29909]
Length = 191
Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 69/180 (38%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ L
Sbjct: 3 TITDAAQSHFAKLLANQEEGTQIRVFVINPGTPTAECGVSYCPPDAVEATDTVLKFEQLS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D +GS ++ + +++R++ VL +++
Sbjct: 63 AYVDEMS--KPYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVDDTAPLMERVEYVLQSQI 119
Query: 130 RPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + D + L G C+GC TLK G+ L PE+K +R
Sbjct: 120 NPQLAGHGGRVTLMEITPDALAILQFGGGCNGCSMVDVTLKEGIEKELLQKFPELKGVRD 179
>gi|65316943|ref|ZP_00389902.1| COG0694: Thioredoxin-like proteins and domains [Bacillus anthracis
str. A2012]
Length = 95
Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + +++ EVLD ++RP + RDGGD+ +GIV L + GAC CPS++ TLK G+
Sbjct: 2 ENPHMQEQVLEVLD-KLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L VP V ++ V
Sbjct: 61 ERALLEEVPGVIEVEQV 77
>gi|254415273|ref|ZP_05029035.1| hypothetical protein MC7420_2699 [Microcoleus chthonoplastes PCC
7420]
gi|196178079|gb|EDX73081.1| hypothetical protein MC7420_2699 [Microcoleus chthonoplastes PCC
7420]
Length = 84
Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ + ++ VLD +RP + DGG++ IV L ++GAC CPS++ TLK G+
Sbjct: 10 ALTSENVEAVLDE-LRPYLMADGGNVDLVEIDGPIVKLRLQGACGSCPSSAMTLKMGIER 68
Query: 175 ILNHFVPEVKDIRTV 189
L F+PE+ ++ V
Sbjct: 69 RLREFIPEIVEVEQV 83
>gi|149183085|ref|ZP_01861537.1| YutI [Bacillus sp. SG-1]
gi|148849214|gb|EDL63412.1| YutI [Bacillus sp. SG-1]
Length = 78
Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ +V +++EVLD ++RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 2 TQQELVPQVQEVLD-KLRPFLLRDGGDCELVDIEDGIVKLRLLGACGSCPSSTITLKAGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L VP + ++ V
Sbjct: 61 ERALLEEVPGIVEVEQV 77
>gi|85710810|ref|ZP_01041871.1| hypothetical protein OS145_02245 [Idiomarina baltica OS145]
gi|85695214|gb|EAQ33151.1| hypothetical protein OS145_02245 [Idiomarina baltica OS145]
Length = 192
Score = 111 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 14/181 (7%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F + PG+ + G + D + + R P G
Sbjct: 3 RISESAQKHFCKLLADQPEGTNIRVFVVNPGMPNAECGVSYCPP--DSVEPDDERLPFNG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVR 130
P + + + + + + D+ ++ R++ V+ +
Sbjct: 61 FDAVVDSGSAPFLEDAVIDFEEQELGSQLTLKAPNAKARKVADDAPLIDRVEYVIQAEIN 120
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRT 188
P +A GG ++ DG L G C+GC T+K G+ L P E+ +R
Sbjct: 121 PQLANHGGHVLVTEITEDGKAVLQFGGGCNGCSMIDVTVKNGIEKELIERFPDEITGVRD 180
Query: 189 V 189
V
Sbjct: 181 V 181
>gi|238604262|ref|XP_002396156.1| hypothetical protein MPER_03666 [Moniliophthora perniciosa FA553]
gi|215468178|gb|EEB97086.1| hypothetical protein MPER_03666 [Moniliophthora perniciosa FA553]
Length = 115
Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 124 VLDNRVRPAVARDGGDIVFKGYRD---GIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
++ RVRPA+ DGGDI ++G+ + G+V + ++G+C GC S++ TLK G+ +L H++
Sbjct: 21 AVETRVRPAIQEDGGDIEYRGFDEDGSGLVKIKLKGSCRGCDSSTVTLKSGIERMLMHYI 80
Query: 181 PEVKDIRTV 189
PEVK + V
Sbjct: 81 PEVKGVEQV 89
>gi|120596952|ref|YP_961526.1| putative DNA uptake protein [Shewanella sp. W3-18-1]
gi|146294876|ref|YP_001185300.1| putative DNA uptake protein [Shewanella putrefaciens CN-32]
gi|150383450|sp|A1RE77|NFUA_SHESW RecName: Full=Fe/S biogenesis protein nfuA
gi|166990531|sp|A4YC18|NFUA_SHEPC RecName: Full=Fe/S biogenesis protein nfuA
gi|120557045|gb|ABM22972.1| HesB/YadR/YfhF-family protein [Shewanella sp. W3-18-1]
gi|145566566|gb|ABP77501.1| HesB/YadR/YfhF-family protein [Shewanella putrefaciens CN-32]
gi|319424543|gb|ADV52617.1| IscR-regulated protein YhgI [Shewanella putrefaciens 200]
Length = 192
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 68/182 (37%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F I PG A G + D + + + G
Sbjct: 3 TISDAAQAHFVKLLADQPEGTHIRVFVISPGTAQAECGVSYCPP--DAVESDDIELEFNG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
P + + D D +GS + D+ +V+RI+ V+ + +
Sbjct: 61 FNAMVDEKSAPFLEEATI-DFVTDQLGSQLTLKAPNAKMRKVSGDAPLVERIEYVIQSEI 119
Query: 130 RPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIR 187
P +A GG+I+ +G+ L G C+GC TLK G+ L P E+ +R
Sbjct: 120 NPQLASHGGNIMLVEITSEGVAVLQFGGGCNGCSQVDITLKDGIEKQLLDMFPGELTGVR 179
Query: 188 TV 189
V
Sbjct: 180 DV 181
>gi|114561432|ref|YP_748945.1| putative DNA uptake protein [Shewanella frigidimarina NCIMB 400]
gi|119370614|sp|Q089F8|NFUA_SHEFN RecName: Full=Fe/S biogenesis protein nfuA
gi|114332725|gb|ABI70107.1| HesB/YadR/YfhF-family protein [Shewanella frigidimarina NCIMB 400]
Length = 192
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F I PG A G + D + + + P G
Sbjct: 3 TISDTAQAHFVKLLADQPEGTHIRVFVISPGTAQAECGVSYCPP--DAAEADDVELPFNG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
P + + + D D +GS + D+ +V+RI+ ++ + +
Sbjct: 61 FSAMVDEKSAPFLDDASI-DFVTDQLGSQLTLKAPNAKMRKVSGDAPLVERIEYIIQSEI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIR 187
P +A GG+I+ G+ L G C+GC TLK G+ L P E+ +R
Sbjct: 120 NPQLASHGGNIMLVEITEAGVAVLQFGGGCNGCSQVDITLKDGIEKQLLDMFPTELTGVR 179
Query: 188 TV 189
V
Sbjct: 180 DV 181
>gi|116783204|gb|ABK22836.1| unknown [Picea sitchensis]
Length = 248
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 102 LDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGC 161
++ + S E + + ++ VLD VRP + DGG++ +V L ++GAC C
Sbjct: 84 VEAIASPPSTEGLALTEENVEMVLDE-VRPYLMSDGGNVELYDIDGLVVKLKLQGACGSC 142
Query: 162 PSASETLKYGVANILNHFVPEVKDIRTV 189
PS+ T+K G+ L +PE+ + V
Sbjct: 143 PSSLMTMKMGIERRLMEQIPEIVAVEQV 170
Score = 44.4 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 34/89 (38%), Gaps = 5/89 (5%)
Query: 100 MKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGAC 158
++ + E+ + + E + +RP + GG + + IV + + G
Sbjct: 162 PEIVAVEQVMDGETGLELNEENVEKVLAEIRPYLVGTGGGELELVEIEEPIVKVRIGGPA 221
Query: 159 SGCPSASETLKYGVANILNHFVPEVKDIR 187
+G T++ V L +P + ++
Sbjct: 222 AG----VMTVRVAVTQKLREKIPAIAAVQ 246
>gi|301155452|emb|CBW14918.1| predicted gluconate transport associated protein [Haemophilus
parainfluenzae T3T1]
Length = 194
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 63/180 (35%), Gaps = 14/180 (7%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF + + RIF + PG G + + ++
Sbjct: 6 ISDAAQAHFRKLLDTQEEGTNIRIFVVNPGTPGAECGVSYCPPNSVEATDTEMKYDTFSA 65
Query: 81 IMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVRP 131
++ P + + + + + + D+ +++R++ V+ ++ P
Sbjct: 66 FVDEIS--LPFLEDAEIDYVTEELGAQLTLKAPNAKMRKVADDAPLIERVEYVIQTQINP 123
Query: 132 AVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRTV 189
+A GG I DG L G C+GC TLK GV L P E+K R V
Sbjct: 124 QLASHGGKITLIEITDDGYAVLQFGGGCNGCSMVDVTLKDGVEKQLVALFPNELKGARDV 183
>gi|24376092|ref|NP_720135.1| putative DNA uptake protein [Shewanella oneidensis MR-1]
gi|51702012|sp|Q8E8P2|NFUA_SHEON RecName: Full=Fe/S biogenesis protein nfuA
gi|24351118|gb|AAN57579.1|AE015893_8 yhgI protein [Shewanella oneidensis MR-1]
Length = 192
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 68/182 (37%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F I PG A G + D + + + G
Sbjct: 3 TISDAAQAHFVKLLADQPEGTHIRVFVISPGTAQAECGVSYCPP--DAVESDDIELAFNG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
P + + D D +GS + D+ +V+RI+ V+ + +
Sbjct: 61 FSAMVDEKSAPFLEEASI-DFVTDQLGSQLTLKAPNAKMRKVAGDAPLVERIEYVIQSEI 119
Query: 130 RPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIR 187
P +A GG+I+ +G+ L G C+GC TLK G+ L P E+ +R
Sbjct: 120 NPQLASHGGNIMLVEITGEGVAVLQFGGGCNGCSQVDITLKDGIEKQLLDMFPGELTGVR 179
Query: 188 TV 189
V
Sbjct: 180 DV 181
>gi|332707425|ref|ZP_08427474.1| thioredoxin-like protein [Lyngbya majuscula 3L]
gi|332353776|gb|EGJ33267.1| thioredoxin-like protein [Lyngbya majuscula 3L]
Length = 80
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
E+ + + ++ VLD +RP + DGG++ V L ++GAC CPS++ TL+
Sbjct: 1 MSETMALTPENVETVLDE-MRPYLMADGGNVELVELDGPTVKLRLQGACGSCPSSTMTLR 59
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ L F+PE+ ++ V
Sbjct: 60 MGIERRLKEFIPEILEVEQV 79
>gi|172035933|ref|YP_001802434.1| NifU-like protein [Cyanothece sp. ATCC 51142]
gi|171697387|gb|ACB50368.1| NifU-like protein [Cyanothece sp. ATCC 51142]
Length = 80
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+++VLD +RP + DGG++ IV L ++GAC CPS++ TLK G+ L
Sbjct: 10 DNVEQVLDE-MRPYLMADGGNVELVEIEGPIVKLRLQGACGSCPSSTMTLKMGIERRLRE 68
Query: 179 FVPEVKDIRT 188
+PE+ ++
Sbjct: 69 MIPEIAEVEQ 78
>gi|325576565|ref|ZP_08147283.1| Fe/S-biogenesis protein NfuA [Haemophilus parainfluenzae ATCC
33392]
gi|325161128|gb|EGC73243.1| Fe/S-biogenesis protein NfuA [Haemophilus parainfluenzae ATCC
33392]
Length = 194
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 63/180 (35%), Gaps = 14/180 (7%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF + + RIF + PG G + + ++
Sbjct: 6 ISDAAQAHFRKLLDTQEEGTNIRIFVVNPGTPGAECGVSYCPPNSVEATDTEMKYDTFSA 65
Query: 81 IMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVRP 131
++ P + + + + + + D+ +++R++ V+ ++ P
Sbjct: 66 FVDEIS--LPFLEDAEIDYVTEELGAQLTLKAPNAKMRKVADDAPLIERVEYVIQTQINP 123
Query: 132 AVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRTV 189
+A GG I DG L G C+GC TLK GV L P E+K R V
Sbjct: 124 QLASHGGKITLIEITDDGYAVLQFGGGCNGCSMVDVTLKDGVEKQLVSLFPNELKGARDV 183
>gi|163748829|ref|ZP_02156081.1| yhgI protein [Shewanella benthica KT99]
gi|161331603|gb|EDQ02408.1| yhgI protein [Shewanella benthica KT99]
Length = 192
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F I PG A+ G + D + + G
Sbjct: 3 TISDAAQAHFVTLLADQPEGTHIRVFVISPGTATAECGVSYCPP--DAVEADDTELEFTG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
P + + + D D +GS + SD+++ +RI+ V+ + +
Sbjct: 61 FNAMVDEKSVPFLEDATI-DFVTDQLGSQLTLKAPNAKMRKVNSDASLNERIEYVIQSEI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIR 187
P +A GG+I+ +G+ L G C+GC TLK G+ L P E+ ++
Sbjct: 120 NPQLASHGGNIMLMEVSEEGVAILQFGGGCNGCSMVDVTLKDGIEKQLLEMFPGELTGVK 179
Query: 188 TV 189
+
Sbjct: 180 DI 181
>gi|114049364|ref|YP_739914.1| putative DNA uptake protein [Shewanella sp. MR-7]
gi|119370616|sp|Q0HPU8|NFUA_SHESR RecName: Full=Fe/S biogenesis protein nfuA
gi|113890806|gb|ABI44857.1| HesB/YadR/YfhF-family protein [Shewanella sp. MR-7]
Length = 192
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 69/182 (37%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F I PG A G + D + + + G
Sbjct: 3 TISDAAQAHFVKLLADQPEGTHIRVFVISPGTAQAECGVSYCPP--DAVESDDIELEFNG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
P + + D D +GS + SD+ + +R++ V+ + +
Sbjct: 61 FSAMVDEKSAPFLEEASI-DFVTDQLGSQLTLKAPNAKMRKVSSDAPLAERVEYVIQSEI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIR 187
P +A GG+I+ ++G+ L G C+GC TLK G+ L P E+ +R
Sbjct: 120 NPQLASHGGNIMLVEITQEGVAVLQFGGGCNGCSQVDITLKDGIEKQLLDMFPGELTGVR 179
Query: 188 TV 189
V
Sbjct: 180 DV 181
>gi|148976499|ref|ZP_01813195.1| predicted gluconate transport associated protein [Vibrionales
bacterium SWAT-3]
gi|145964075|gb|EDK29332.1| predicted gluconate transport associated protein [Vibrionales
bacterium SWAT-3]
Length = 194
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 64/182 (35%), Gaps = 10/182 (5%)
Query: 17 IPGQVVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRP 75
+ + HF+N + R+F + PG + G + + L+
Sbjct: 1 MSNITITETAQTHFANLLSQQPEGTNIRVFVVNPGTQNAECGVSYCPTDAIEASDTELKF 60
Query: 76 PVLGMIME-----HFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNR 128
++ + +G + + D+ +++R++ + +
Sbjct: 61 EAFSAYVDELSLPFLDEAEIDFVTDKMGSQLTLKAPNAKMRKVADDAPLLERVEYAIQTQ 120
Query: 129 VRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDI 186
V P +A GG + DG ++ G C+GC TLK G+ +L F E+ +
Sbjct: 121 VNPQLAGHGGHVSLVEITEDGAAIVAFGGGCNGCSMVDVTLKEGIEKELLQQFEGELTAV 180
Query: 187 RT 188
R
Sbjct: 181 RD 182
>gi|284008807|emb|CBA75563.1| gluconate metabolism protein (iron-sulphur cluster biosynthesis)
[Arsenophonus nasoniae]
Length = 192
Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 16/180 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ + R+F I PG S G + + L+ L
Sbjct: 4 ITEAAQAHFAKLLANQEPGTQIRVFVINPGTPSAECGVSYCPPDAIESTDIELKFAKLSA 63
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
++ + P + + D D +GS + D+ +++R++ V+ +++
Sbjct: 64 YVDEISA--PFLEEAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLIERVEYVIQSQIN 120
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRT 188
P +A GG + DG L G C+GC TLK G+ L + P E+K ++
Sbjct: 121 PQLAGHGGRVSLMEITDDGYAILQFGGGCNGCSMVDITLKEGIEKQLLNMFPDELKGVKD 180
>gi|315635110|ref|ZP_07890388.1| Fe/S-biogenesis protein NfuA [Aggregatibacter segnis ATCC 33393]
gi|315476072|gb|EFU66826.1| Fe/S-biogenesis protein NfuA [Aggregatibacter segnis ATCC 33393]
Length = 194
Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 65/181 (35%), Gaps = 14/181 (7%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ E HF + + RIF + PG S G + + ++
Sbjct: 5 TISAEAQAHFRRLLDQQEEGTNIRIFVVNPGTPSAECGVSYCPPNSVEASDTEMKYDTFS 64
Query: 80 MIMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVR 130
++ P + + + + + + D+ +++R++ V+ ++
Sbjct: 65 AFVDDIS--LPFLEDAEIDYVTEELGAQLTLKAPNAKMRKVADDAPLIERVEYVIQTQIN 122
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRT 188
P +A GG I DG L G C+GC TLK GV L P E+K +
Sbjct: 123 PQLASHGGKITLLEITDDGYAILQFGGGCNGCSMVDVTLKDGVEKQLISLFPDELKGAKD 182
Query: 189 V 189
V
Sbjct: 183 V 183
>gi|170078022|ref|YP_001734660.1| NifU like protein [Synechococcus sp. PCC 7002]
gi|169885691|gb|ACA99404.1| NifU like protein [Synechococcus sp. PCC 7002]
Length = 78
Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ + ++ LD +RP + DGG++ +V L ++GAC CPS++ TL+ G+
Sbjct: 4 ALTTENVEATLDE-LRPYLKADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLRMGIER 62
Query: 175 ILNHFVPEVKDIRTV 189
L +PE+ ++ V
Sbjct: 63 RLRENIPEIAEVEQV 77
>gi|313230549|emb|CBY18765.1| unnamed protein product [Oikopleura dioica]
Length = 146
Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVA 173
VV IKE+LD R+RP V DGGDI F + G++ LS+ GAC+ CPS+ TLK+GV
Sbjct: 48 EVVAMIKELLDTRIRPTVMEDGGDIAFVSFDPDTGVLQLSLIGACATCPSSVVTLKHGVE 107
Query: 174 NILNHFVPEVKDIRTV 189
N++ ++PE+ ++ +
Sbjct: 108 NMMKFYIPEITEVEQI 123
>gi|254430627|ref|ZP_05044330.1| NifU domain protein [Cyanobium sp. PCC 7001]
gi|197625080|gb|EDY37639.1| NifU domain protein [Cyanobium sp. PCC 7001]
Length = 88
Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 103 DDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCP 162
+ + + ++ ++ LD +RP + DGG++ IV + ++GAC CP
Sbjct: 2 TTEAASTSQDPRALTIENVERTLDE-LRPYLMADGGNVEVVEIDGPIVKVRLQGACGSCP 60
Query: 163 SASETLKYGVANILNHFVPEVKDIRTV 189
S++ TLK G+ L +PEV ++ V
Sbjct: 61 SSTMTLKMGIERKLREAIPEVSEVVQV 87
>gi|159028416|emb|CAO89859.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 78
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+++VLD +RP + DGG++ +V + ++GAC CPS++ TLK G+ L
Sbjct: 8 DNVEKVLDE-MRPYLMSDGGNVELVEIDGPVVKVRLQGACGSCPSSTMTLKMGIERRLRE 66
Query: 179 FVPEVKDIRT 188
+PE+ ++
Sbjct: 67 MIPEIAEVEQ 76
>gi|126652035|ref|ZP_01724224.1| nitrogen fixation protein (NifU protein) [Bacillus sp. B14905]
gi|169826170|ref|YP_001696328.1| NifU-like protein [Lysinibacillus sphaericus C3-41]
gi|299536342|ref|ZP_07049655.1| NifU-like protein [Lysinibacillus fusiformis ZC1]
gi|126591125|gb|EAZ85235.1| nitrogen fixation protein (NifU protein) [Bacillus sp. B14905]
gi|168990658|gb|ACA38198.1| NifU-like protein [Lysinibacillus sphaericus C3-41]
gi|298728328|gb|EFI68890.1| NifU-like protein [Lysinibacillus fusiformis ZC1]
Length = 78
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+++ + +++EVLD ++RP + RDGGD DG+V L + GAC CPS++ TLK G+
Sbjct: 2 AEATINDQVQEVLD-KLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L VP + ++ V
Sbjct: 61 ERALLEEVPGIVEVEQV 77
>gi|302342797|ref|YP_003807326.1| nitrogen-fixing NifU domain protein [Desulfarculus baarsii DSM
2075]
gi|301639410|gb|ADK84732.1| nitrogen-fixing NifU domain protein [Desulfarculus baarsii DSM
2075]
Length = 73
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ QR++E LD ++RPA+ +DGGD+ DG+V + ++GAC GCP + TLK G+ +
Sbjct: 1 MKQRVQEALD-KIRPALQKDGGDVKLVDVSDDGVVKVQLQGACHGCPMSQMTLKMGIEKV 59
Query: 176 LNHFVPEVKDIRTV 189
L VPEV+ + +V
Sbjct: 60 LKQNVPEVQKVESV 73
>gi|262273566|ref|ZP_06051380.1| NfuA Fe-S protein maturation [Grimontia hollisae CIP 101886]
gi|262222544|gb|EEY73855.1| NfuA Fe-S protein maturation [Grimontia hollisae CIP 101886]
Length = 194
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF E + R+F + PG + G + + ++
Sbjct: 5 TISESAQSHFVKLLEQQPEGTNIRVFVVNPGTQNAECGVSYCPQDAVEATDTEIKFNGFS 64
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D MGS + D+ +++R++ V+ +V
Sbjct: 65 AYIDELS--LPFLEDAEI-DFVTDKMGSQLTLKAPNAKMRKVADDAPLLERVEYVIQTQV 121
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIR 187
P +A GG I DG+ + G C+GC TLK G+ +L F E+K +R
Sbjct: 122 NPQLAGHGGHINLIEITEDGVAVIQFGGGCNGCSMVDVTLKDGIEKQLLEEFSGELKGVR 181
Query: 188 TV 189
V
Sbjct: 182 DV 183
>gi|251793451|ref|YP_003008180.1| putative DNA uptake protein [Aggregatibacter aphrophilus NJ8700]
gi|247534847|gb|ACS98093.1| IscR-regulated protein YhgI [Aggregatibacter aphrophilus NJ8700]
Length = 194
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 63/180 (35%), Gaps = 14/180 (7%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF E + RIF + PG S G + + ++
Sbjct: 6 ISEAAQAHFRRLLEQQEEGTNIRIFVVNPGTPSAECGVSYCPPNSVEASDTEIKFTGFSA 65
Query: 81 IMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVRP 131
++ P + + + + + D+ +++R++ V+ ++ P
Sbjct: 66 FVDEIS--LPFLEEAEIDYVTEELGAQLTLKAPNAKMRKVADDAPLIERVEYVIQTQINP 123
Query: 132 AVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRTV 189
+A GG I DG L G C+GC TLK GV L P E+K R V
Sbjct: 124 QLASHGGKITLLEITDDGYAILQFGGGCNGCSMVDVTLKDGVEKQLISLFPNELKGARDV 183
>gi|218245975|ref|YP_002371346.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
8801]
gi|257059024|ref|YP_003136912.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 8802]
gi|218166453|gb|ACK65190.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 8801]
gi|256589190|gb|ACV00077.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 8802]
Length = 79
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
+E+ ++ VLD +RP + DGG++ +V L ++GAC CPS++ TL+
Sbjct: 1 METMELTPDNVETVLDE-MRPYLMADGGNVELVELDGPVVKLRLQGACGSCPSSTMTLRM 59
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ L +PE+ ++ V
Sbjct: 60 GIERRLREMIPEIAEVEQV 78
>gi|294138942|ref|YP_003554920.1| yhgI protein [Shewanella violacea DSS12]
gi|293325411|dbj|BAJ00142.1| yhgI protein [Shewanella violacea DSS12]
Length = 192
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F I PG A+ G + + D L G
Sbjct: 3 TISDAAQAHFVTLLADQPEGTHIRVFVISPGTATAECGVSYCPPDAVESDDTEL--EFTG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
P + + + D D +GS + SD+++ +RI+ V+ + +
Sbjct: 61 FNAMVDAKSVPFLEDATI-DFVTDQLGSQLTLKAPNAKMRKVNSDASLNERIEYVIQSEI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIR 187
P +A GG+I+ +G+ L G C+GC TLK G+ L P E+ +R
Sbjct: 120 NPQLASHGGNIMLMEVSEEGVAILQFGGGCNGCSMVDVTLKNGIEKQLLDMFPGELTGVR 179
Query: 188 TV 189
+
Sbjct: 180 DI 181
>gi|77919925|ref|YP_357740.1| NifU-like protein [Pelobacter carbinolicus DSM 2380]
gi|77546008|gb|ABA89570.1| NifU-like protein [Pelobacter carbinolicus DSM 2380]
Length = 103
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ +++ E+LD ++RP++ DGGD+ DG+V + ++GAC CP ++ TLK G+
Sbjct: 28 QMKEQVLEILD-KIRPSLQADGGDVELVDISEDGVVKVRLKGACGSCPMSTMTLKMGIER 86
Query: 175 ILNHFVPEVKDI 186
L VP VK++
Sbjct: 87 TLKAQVPGVKEV 98
>gi|318040472|ref|ZP_07972428.1| NifU-like protein [Synechococcus sp. CB0101]
Length = 96
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ ++ ++ LD +RP + DGG++ IV + ++GAC CPS++ TLK G+
Sbjct: 22 ALTIENVERTLDE-LRPYLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIER 80
Query: 175 ILNHFVPEVKDIRTV 189
L +PEV ++ V
Sbjct: 81 KLREAIPEVSEVVQV 95
>gi|52081716|ref|YP_080507.1| hypothetical protein BL02118 [Bacillus licheniformis ATCC 14580]
gi|52787102|ref|YP_092931.1| YutI [Bacillus licheniformis ATCC 14580]
gi|319647633|ref|ZP_08001851.1| nitrogen fixation protein [Bacillus sp. BT1B_CT2]
gi|52004927|gb|AAU24869.1| Conserved protein YutI [Bacillus licheniformis ATCC 14580]
gi|52349604|gb|AAU42238.1| YutI [Bacillus licheniformis ATCC 14580]
gi|317389974|gb|EFV70783.1| nitrogen fixation protein [Bacillus sp. BT1B_CT2]
Length = 79
Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ + ++++EVLD ++RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 3 TEVEMKEQVQEVLD-KLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGI 61
Query: 173 ANILNHFVPEVKDIRTV 189
L VP V ++ V
Sbjct: 62 ERALLEEVPGVIEVEQV 78
>gi|90581403|ref|ZP_01237198.1| hypothetical protein VAS14_21772 [Vibrio angustum S14]
gi|90437380|gb|EAS62576.1| hypothetical protein VAS14_21772 [Vibrio angustum S14]
Length = 192
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 68/182 (37%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F + PG S G + + ++ +
Sbjct: 3 TITESAQQHFGKLLAQQPEGTNIRVFVVNPGTQSAECGVSYCPPEAVEASDTEIKLELFS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D MGS + D+ +++R+ V+ +V
Sbjct: 63 AFLDELS--LPFLEDAEI-DFVTDKMGSQLTLKAPNAKVRKVSDDAPLMERVDYVIQTQV 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIR 187
P +A GG + DG+ L G C+GC TLK G+ +L F E+ +R
Sbjct: 120 NPQLAGHGGHVSLSEITEDGVAILQFGGGCNGCSMVDVTLKEGIEKELLAQFEGELTGVR 179
Query: 188 TV 189
+
Sbjct: 180 DI 181
>gi|330447159|ref|ZP_08310809.1| iron-sulfur cluster scaffold protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491350|dbj|GAA05306.1| iron-sulfur cluster scaffold protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 192
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 68/182 (37%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F + PG S G + + ++ +
Sbjct: 3 TISESAQQHFGKLLAQQPEGTNIRVFVVNPGTQSAECGVSYCPPEAVEASDTEIKLELFS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D MGS + D+ +++R+ V+ +V
Sbjct: 63 AFIDELS--LPFLADAEI-DFVTDKMGSQLTLKAPNAKVRKVADDAPLMERVDYVIQTQV 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIR 187
P +A GG + DG+ L G C+GC TLK G+ +L F E+ +R
Sbjct: 120 NPQLAGHGGHVSLSEITEDGVAILQFGGGCNGCSMVDVTLKEGIEKELLAQFEGELTGVR 179
Query: 188 TV 189
+
Sbjct: 180 DI 181
>gi|8571395|gb|AAF76865.1|AF232919_4 NifU-like protein [Sinorhizobium meliloti]
Length = 63
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/63 (65%), Positives = 55/63 (87%)
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
RVRPAVA+DGGDI F+G++DG VFL+M+GACSGCPS++ TL++GV N+L HFVPEV+ +
Sbjct: 1 TRVRPAVAQDGGDITFRGFKDGTVFLNMKGACSGCPSSTATLRHGVQNLLRHFVPEVEAV 60
Query: 187 RTV 189
+V
Sbjct: 61 ESV 63
>gi|289812184|ref|ZP_06542813.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 173
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 67/174 (38%), Gaps = 15/174 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ +L
Sbjct: 3 RISDAAQAHFAKLLANQKEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDLLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ L +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYALQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
P +A GG + +G L G C+GC TLK G+ L + PE
Sbjct: 120 NPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPE 173
>gi|145334787|ref|NP_001078739.1| NFU2 (NIFU-LIKE PROTEIN 2); structural molecule [Arabidopsis
thaliana]
gi|222422967|dbj|BAH19468.1| AT5G49940 [Arabidopsis thaliana]
gi|332008491|gb|AED95874.1| NifU-like protein 2 [Arabidopsis thaliana]
Length = 185
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD +RP + DGG++ IV + ++GAC CPS++ T+K G+ L
Sbjct: 86 TEENVESVLDE-IRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRL 144
Query: 177 NHFVPEVKDIRT 188
+PE+ +
Sbjct: 145 MEKIPEIVAVEA 156
>gi|126660171|ref|ZP_01731289.1| putative NifU-like protein [Cyanothece sp. CCY0110]
gi|126618536|gb|EAZ89287.1| putative NifU-like protein [Cyanothece sp. CCY0110]
Length = 80
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++ VLD +RP + DGG++ IV L ++GAC CPS++ TLK G+ L
Sbjct: 10 DNVETVLDE-MRPYLMADGGNVELVEIEGPIVKLRLQGACGSCPSSTMTLKMGIERRLRE 68
Query: 179 FVPEVKDIRT 188
+PE+ ++
Sbjct: 69 MIPEIAEVEQ 78
>gi|67921653|ref|ZP_00515171.1| Nitrogen-fixing NifU, C-terminal [Crocosphaera watsonii WH 8501]
gi|67856765|gb|EAM52006.1| Nitrogen-fixing NifU, C-terminal [Crocosphaera watsonii WH 8501]
Length = 80
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++ VLD +RP + DGG++ +V L ++GAC CPS++ TL+ G+ L
Sbjct: 10 DNVETVLDE-MRPYLMADGGNVELVDIEGPVVKLRLQGACGSCPSSTMTLRMGIERRLRE 68
Query: 179 FVPEVKDIRTV 189
+PE+ ++ V
Sbjct: 69 MIPEIGEVEQV 79
>gi|293391255|ref|ZP_06635589.1| IscR-regulated protein YhgI [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290951789|gb|EFE01908.1| IscR-regulated protein YhgI [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 194
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 65/181 (35%), Gaps = 14/181 (7%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + + RIF + PG + G + + D ++
Sbjct: 5 TISEAAQAHFRRLLDQQEEGTHIRIFVVNPGTPNAECGVSYCPPNSVEADDTEIKYDSFS 64
Query: 80 MIMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVR 130
++ P + + + + + + D+ +++R++ V+ ++
Sbjct: 65 AFVDEIS--LPFLEDAEIDYVTEELGAQLTLKAPNAKMRKVADDAPLIERVEYVIQTQIN 122
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRT 188
P +A GG I DG L G C+GC TLK GV L + P E+ R
Sbjct: 123 PQLASHGGKITLLEITDDGYAILQFGGGCNGCSMVDVTLKDGVEKQLVNIFPGELNGARD 182
Query: 189 V 189
V
Sbjct: 183 V 183
>gi|284929666|ref|YP_003422188.1| thioredoxin-like protein [cyanobacterium UCYN-A]
gi|284810110|gb|ADB95807.1| thioredoxin-like protein [cyanobacterium UCYN-A]
Length = 76
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+++VLD +RP + DGG++ IV L ++GAC CPS++ TLK G+ L
Sbjct: 7 NVEQVLDE-LRPYLIADGGNVELVEIDGAIVKLRLQGACGSCPSSTMTLKMGIERRLKEM 65
Query: 180 VPEVKDIRT 188
+PEV ++
Sbjct: 66 IPEVSEVEQ 74
>gi|72383588|ref|YP_292943.1| NifU-like protein [Prochlorococcus marinus str. NATL2A]
gi|124025184|ref|YP_001014300.1| NifU-like protein [Prochlorococcus marinus str. NATL1A]
gi|72003438|gb|AAZ59240.1| NifU-like protein [Prochlorococcus marinus str. NATL2A]
gi|123960252|gb|ABM75035.1| NifU-like protein [Prochlorococcus marinus str. NATL1A]
Length = 81
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
E+ + + +++VLD +RP + DGG++ IV + ++GAC CPS++ TLK
Sbjct: 3 DETLALTTENVEKVLDE-LRPFLMADGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLKM 61
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ L +PEV ++ V
Sbjct: 62 GIERKLREMIPEVSEVIQV 80
>gi|126172396|ref|YP_001048545.1| putative DNA uptake protein [Shewanella baltica OS155]
gi|153002690|ref|YP_001368371.1| putative DNA uptake protein [Shewanella baltica OS185]
gi|160877426|ref|YP_001556742.1| putative DNA uptake protein [Shewanella baltica OS195]
gi|217975268|ref|YP_002360019.1| putative DNA uptake protein [Shewanella baltica OS223]
gi|304412256|ref|ZP_07393864.1| IscR-regulated protein YhgI [Shewanella baltica OS183]
gi|307306040|ref|ZP_07585785.1| IscR-regulated protein YhgI [Shewanella baltica BA175]
gi|166990529|sp|A3CYW3|NFUA_SHEB5 RecName: Full=Fe/S biogenesis protein nfuA
gi|166990530|sp|A6WU19|NFUA_SHEB8 RecName: Full=Fe/S biogenesis protein nfuA
gi|189041728|sp|A9KUY3|NFUA_SHEB9 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767326|sp|B8ECN4|NFUA_SHEB2 RecName: Full=Fe/S biogenesis protein nfuA
gi|125995601|gb|ABN59676.1| HesB/YadR/YfhF-family protein [Shewanella baltica OS155]
gi|151367308|gb|ABS10308.1| HesB/YadR/YfhF-family protein [Shewanella baltica OS185]
gi|160862948|gb|ABX51482.1| IscR-regulated protein YhgI [Shewanella baltica OS195]
gi|217500403|gb|ACK48596.1| IscR-regulated protein YhgI [Shewanella baltica OS223]
gi|304349291|gb|EFM13701.1| IscR-regulated protein YhgI [Shewanella baltica OS183]
gi|306910913|gb|EFN41340.1| IscR-regulated protein YhgI [Shewanella baltica BA175]
gi|315269629|gb|ADT96482.1| IscR-regulated protein YhgI [Shewanella baltica OS678]
Length = 192
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 70/182 (38%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F I PG + G + D + + + G
Sbjct: 3 TISDAAQAHFVKLLADQPEGTHIRVFVISPGTSQAECGVSYCPP--DAVESDDIEIEFTG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
P + + + D D +GS + D+ +V+RI+ V+ + +
Sbjct: 61 FNAMVDEKSAPFLEDATI-DFVTDQLGSQLTLKAPNAKMRKVSGDAPLVERIEYVIQSEI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIR 187
P +A GG+I+ ++G+ L G C+GC TLK G+ L P E+ +R
Sbjct: 120 NPQLAGHGGNIMLVEITKEGVAVLQFGGGCNGCSQVDITLKDGIEKQLLDMFPGELTGVR 179
Query: 188 TV 189
V
Sbjct: 180 DV 181
>gi|327439123|dbj|BAK15488.1| thioredoxin-like protein [Solibacillus silvestris StLB046]
Length = 78
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+++ +++EVLD ++RP + RDGGD +GIV L + GAC CPS++ TLK G+
Sbjct: 2 TETEQYAQVQEVLD-KLRPFLLRDGGDCELVDIEEGIVKLRLLGACGSCPSSTITLKAGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L VP + ++ V
Sbjct: 61 ERALLEEVPGIVEVEQV 77
>gi|332308531|ref|YP_004436382.1| IscR-regulated protein YhgI [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175860|gb|AEE25114.1| IscR-regulated protein YhgI [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 192
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 61/179 (34%), Gaps = 14/179 (7%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF E + R+F + PG S G + D + G
Sbjct: 4 ISDTAQAHFCKLLEKQEPDTNIRVFVVNPGTPSAECGVSYCPP--DAVEPTDTTLEFNGF 61
Query: 81 IMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVRP 131
P + + + ++ D+ + +RI ++++ + P
Sbjct: 62 DAVVDAESAPFLSEAEIDFVTDQMGSQLTLKAPNAKARKVDDDAPLEERINYMIESEINP 121
Query: 132 AVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
+A GG ++ D G L G C+GC TLK G+ +L F E+ ++
Sbjct: 122 QLASHGGKVMLMEITDKGEAILQFGGGCNGCSMVDVTLKDGIEKQMLAQFSGELTAVKD 180
>gi|8777425|dbj|BAA97015.1| unnamed protein product [Arabidopsis thaliana]
Length = 684
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD +RP + DGG++ IV + ++GAC CPS++ T+K G+ L
Sbjct: 86 TEENVESVLDE-IRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRL 144
Query: 177 NHFVPEVKDIRT 188
+PE+ +
Sbjct: 145 MEKIPEIVAVEA 156
>gi|16332125|ref|NP_442853.1| NifU protein [Synechocystis sp. PCC 6803]
gi|1653754|dbj|BAA18665.1| NifU protein [Synechocystis sp. PCC 6803]
Length = 76
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ ++ VLD +RP + DGG++ IV + ++GAC CPS++ TLK G+
Sbjct: 2 ELTLNNVETVLDE-LRPYLMADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLKMGIER 60
Query: 175 ILNHFVPEVKDIRTV 189
L +PE+ ++ V
Sbjct: 61 KLREMIPEIAEVEQV 75
>gi|166364297|ref|YP_001656570.1| NifU-like protein [Microcystis aeruginosa NIES-843]
gi|166086670|dbj|BAG01378.1| NifU-like protein [Microcystis aeruginosa NIES-843]
Length = 78
Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+++VLD +RP + DGG++ +V L ++GAC CPS++ TLK G+ L
Sbjct: 8 NNVEQVLDE-MRPYLMADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLKMGIERRLRE 66
Query: 179 FVPEVKDIRT 188
+PE+ ++
Sbjct: 67 VIPEIAEVEQ 76
>gi|229543324|ref|ZP_04432384.1| nitrogen-fixing NifU domain protein [Bacillus coagulans 36D1]
gi|229327744|gb|EEN93419.1| nitrogen-fixing NifU domain protein [Bacillus coagulans 36D1]
Length = 78
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ ++++EVLD ++RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 4 DTITEQVQEVLD-KLRPFLLRDGGDCELIDVEDGIVKLRLLGACGSCPSSTITLKAGIER 62
Query: 175 ILNHFVPEVKDIRTV 189
L VP V ++ V
Sbjct: 63 ALFEEVPGVMEVEQV 77
>gi|17228804|ref|NP_485352.1| hypothetical protein asr1309 [Nostoc sp. PCC 7120]
gi|75909243|ref|YP_323539.1| nitrogen-fixing NifU-like protein [Anabaena variabilis ATCC 29413]
gi|17130656|dbj|BAB73266.1| asr1309 [Nostoc sp. PCC 7120]
gi|75702968|gb|ABA22644.1| Nitrogen-fixing NifU-like protein [Anabaena variabilis ATCC 29413]
Length = 76
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ ++ VLD +RP + DGG++ IV L ++GAC CPS++ TL+ G+
Sbjct: 2 ELTIDNVETVLDE-MRPYLISDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGIER 60
Query: 175 ILNHFVPEVKDIRTV 189
L +PE+ ++ V
Sbjct: 61 RLREMIPEIAEVEQV 75
>gi|317130102|ref|YP_004096384.1| nitrogen-fixing NifU domain protein [Bacillus cellulosilyticus DSM
2522]
gi|315475050|gb|ADU31653.1| nitrogen-fixing NifU domain protein [Bacillus cellulosilyticus DSM
2522]
Length = 78
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+++ + +++EVLD ++RP + RDGGD+ DGIV + + GAC CPS++ TLK G+
Sbjct: 2 AEATMESQVQEVLD-KLRPFLLRDGGDVELVDVEDGIVKVRLMGACGSCPSSTITLKAGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L VP VK++ V
Sbjct: 61 ERALLEEVPGVKELEQV 77
>gi|300867628|ref|ZP_07112276.1| nitrogen-fixing NifU-like [Oscillatoria sp. PCC 6506]
gi|300334389|emb|CBN57446.1| nitrogen-fixing NifU-like [Oscillatoria sp. PCC 6506]
Length = 79
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + + +++VLD +RP + DGG++ +V L ++GAC CPS++ TL+ G+
Sbjct: 3 TLALTRENVEQVLDE-LRPYLMSDGGNVELVEIEGPVVQLRLQGACGSCPSSAMTLRMGI 61
Query: 173 ANILNHFVPEVKDIRTV 189
L +PE+ ++ V
Sbjct: 62 ERRLRETIPEIAEVEQV 78
>gi|260774744|ref|ZP_05883647.1| NfuA Fe-S protein maturation [Vibrio coralliilyticus ATCC BAA-450]
gi|260609306|gb|EEX35458.1| NfuA Fe-S protein maturation [Vibrio coralliilyticus ATCC BAA-450]
Length = 195
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 70/181 (38%), Gaps = 16/181 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+N + R+F + PG + G + + ++
Sbjct: 6 TITENAQKHFANLLSQQPEGTNIRVFVVNPGTQNAECGVSYCPTEAIEATDTEIKYEGFS 65
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D MGS + D+ +V+R++ V+ +V
Sbjct: 66 AYVDELS--LPFLEDAEI-DFVTDKMGSQLTLKAPNAKMRKVSDDAPLVERVEYVIQTQV 122
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIR 187
P +A GG + DGI ++ G C+GC TLK G+ +L F E+ +R
Sbjct: 123 NPQLAGHGGHVNLVEITEDGIAIVAFGGGCNGCSMVDVTLKEGIEKELLQQFEGELSAVR 182
Query: 188 T 188
Sbjct: 183 D 183
>gi|220907447|ref|YP_002482758.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
7425]
gi|219864058|gb|ACL44397.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 7425]
Length = 76
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+++VLD +RP + DGG++ IV L ++GAC CPS++ TL+ G+
Sbjct: 2 ELTTDNVEKVLDE-LRPYLMADGGNVELVELEGPIVRLRLQGACGSCPSSTMTLRMGIER 60
Query: 175 ILNHFVPEVKDIRTV 189
L +PE+ ++ V
Sbjct: 61 KLRESIPEIAEVEQV 75
>gi|209523451|ref|ZP_03272006.1| nitrogen-fixing NifU domain protein [Arthrospira maxima CS-328]
gi|209496193|gb|EDZ96493.1| nitrogen-fixing NifU domain protein [Arthrospira maxima CS-328]
Length = 79
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + + ++ VLD +RP + DGG++ IV L ++GAC CPS++ TLK G+
Sbjct: 3 TLALTPENVETVLDE-LRPYLMADGGNVEVVELDGPIVRLRLQGACGSCPSSTMTLKMGI 61
Query: 173 ANILNHFVPEVKDIRTV 189
L +PE+ ++ +V
Sbjct: 62 ERRLRERIPEIAEVESV 78
>gi|261867263|ref|YP_003255185.1| putative DNA uptake protein [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261412595|gb|ACX81966.1| IscR-regulated protein YhgI [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 194
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 65/181 (35%), Gaps = 14/181 (7%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + + RIF + PG + G + + D ++
Sbjct: 5 TISEAAQAHFRRLLDQQEEDTHIRIFVVNPGTPNAECGVSYCPPNSVEADDTEIKYDSFS 64
Query: 80 MIMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVR 130
++ P + + + + + + D+ +++R++ V+ ++
Sbjct: 65 AFVDEIS--LPFLEDAEIDYVTEELGAQLTLKAPNAKMRKVADDAPLIERVEYVIQTQIN 122
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRT 188
P +A GG I DG L G C+GC TLK GV L + P E+ R
Sbjct: 123 PQLASHGGKITLLEITDDGYAILQFGGGCNGCSMVDVTLKDGVEKQLVNIFPGELNGARD 182
Query: 189 V 189
V
Sbjct: 183 V 183
>gi|89076068|ref|ZP_01162428.1| hypothetical protein SKA34_16610 [Photobacterium sp. SKA34]
gi|89048220|gb|EAR53802.1| hypothetical protein SKA34_16610 [Photobacterium sp. SKA34]
Length = 194
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 68/182 (37%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F + PG S G + + ++ +
Sbjct: 5 TITESAQQHFGKLLAQQPEGTNIRVFVVNPGTQSAECGVSYCPPEAVEASDTEIKLELFS 64
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D MGS + D+ +++R+ V+ +V
Sbjct: 65 AFLDELS--LPFLEDAEI-DFVTDKMGSQLTLKAPNAKVRKVSDDATLMERVDYVIQTQV 121
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIR 187
P +A GG + DG+ L G C+GC TLK G+ +L F E+ +R
Sbjct: 122 NPQLAGHGGHVSLSEITEDGVAILQFGGGCNGCSMVDVTLKEGIEKELLAQFEGELTGVR 181
Query: 188 TV 189
+
Sbjct: 182 DI 183
>gi|260892780|ref|YP_003238877.1| nitrogen-fixing NifU domain protein [Ammonifex degensii KC4]
gi|260864921|gb|ACX52027.1| nitrogen-fixing NifU domain protein [Ammonifex degensii KC4]
Length = 72
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++++ L ++RP + RDGGD+ DG+V + ++GAC GCP A TLK G+ IL
Sbjct: 1 MREKVEAAL-AQIRPHLQRDGGDVELVAVEDGVVKVRLKGACGGCPMAMVTLKQGIERIL 59
Query: 177 NHFVPEVKDIRTV 189
VPEVK++ V
Sbjct: 60 KEAVPEVKEVVAV 72
>gi|152977236|ref|YP_001376753.1| NifU domain-containing protein [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152025988|gb|ABS23758.1| nitrogen-fixing NifU domain protein [Bacillus cytotoxicus NVH
391-98]
Length = 78
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + +++ EVLD ++RP + RDGGD+ DGIV L + GAC CPS++ TLK G+
Sbjct: 2 ENPNMQEQVLEVLD-KLRPFLLRDGGDVELVDIEDGIVKLRLMGACGSCPSSTITLKAGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L VP V ++ V
Sbjct: 61 ERALLEEVPGVIEVEQV 77
>gi|33862527|ref|NP_894087.1| NifU-like protein [Prochlorococcus marinus str. MIT 9313]
gi|124023791|ref|YP_001018098.1| NifU-like protein [Prochlorococcus marinus str. MIT 9303]
gi|33640640|emb|CAE20429.1| NifU-like protein [Prochlorococcus marinus str. MIT 9313]
gi|123964077|gb|ABM78833.1| NifU-like protein [Prochlorococcus marinus str. MIT 9303]
Length = 81
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + + ++ VLD +RP + DGG++ +V + ++GAC CPS++ TLK G
Sbjct: 4 EAMALTNENVETVLDE-LRPFLMADGGNVEIVEIDGPVVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDIRTV 189
+ L +PEV ++ V
Sbjct: 63 IERKLREMIPEVSEVVQV 80
>gi|254422508|ref|ZP_05036226.1| hypothetical protein S7335_2660 [Synechococcus sp. PCC 7335]
gi|196189997|gb|EDX84961.1| hypothetical protein S7335_2660 [Synechococcus sp. PCC 7335]
Length = 79
Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+++VLD +RP + DGG++ IV L ++GAC CPS++ TL+ G+ L F
Sbjct: 10 NVEKVLDE-LRPYLMADGGNVELVELDGPIVKLRLQGACGSCPSSAMTLRMGIERRLREF 68
Query: 180 VPEVKDIRTV 189
+PE+ +I V
Sbjct: 69 IPEIAEIEQV 78
>gi|284053033|ref|ZP_06383243.1| nitrogen-fixing NifU domain protein [Arthrospira platensis str.
Paraca]
gi|291566311|dbj|BAI88583.1| iron-sulfur cluster assembly factor [Arthrospira platensis NIES-39]
Length = 79
Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + + ++ VLD +RP + DGG++ IV L ++GAC CPS++ TLK G+
Sbjct: 3 TLALTPENVETVLDE-LRPYLMADGGNVEIVELDGPIVRLRLQGACGSCPSSTMTLKMGI 61
Query: 173 ANILNHFVPEVKDIRTV 189
L +PE+ ++ +V
Sbjct: 62 ERRLREKIPEIAEVESV 78
>gi|254228559|ref|ZP_04921984.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262392653|ref|YP_003284507.1| NfuA Fe-S protein maturation [Vibrio sp. Ex25]
gi|151938941|gb|EDN57774.1| conserved hypothetical protein [Vibrio sp. Ex25]
gi|262336247|gb|ACY50042.1| NfuA Fe-S protein maturation [Vibrio sp. Ex25]
Length = 194
Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 16/185 (8%)
Query: 17 IPGQVVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRP 75
+ + HF+N + RIF + PG + G + + +
Sbjct: 1 MSNITITETAQTHFANLLGQQPEGTNIRIFVVNPGTQNAECGVSYCPPEAVEATDTEIPY 60
Query: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVL 125
++ P + + + D D MGS + D+ +V+R++ V+
Sbjct: 61 SGFSAYVDELS--LPFLEDAEI-DFVTDKMGSQLTLKAPNAKMRKVADDAPLVERVEYVI 117
Query: 126 DNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEV 183
+V P +A GG + DGI ++ G C+GC TLK G+ +LN F+ E+
Sbjct: 118 QTQVNPQLAGHGGHVNLVEITEDGIAIVAFGGGCNGCSMVDVTLKEGIEKELLNQFIGEL 177
Query: 184 KDIRT 188
+R
Sbjct: 178 TAVRD 182
>gi|282898150|ref|ZP_06306143.1| Nitrogen-fixing NifU-like protein [Raphidiopsis brookii D9]
gi|281196974|gb|EFA71877.1| Nitrogen-fixing NifU-like protein [Raphidiopsis brookii D9]
Length = 76
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
++ ++ VLD +RP + DGG++ IV L ++GAC CPS++ TL+ G+
Sbjct: 2 ELTLENVETVLDE-MRPYLMSDGGNVEVVELDGPIVKLRLQGACGSCPSSTMTLRMGIER 60
Query: 175 ILNHFVPEVKDIRTV 189
L +PE+ ++ V
Sbjct: 61 RLKEMIPEIGEVEQV 75
>gi|78778799|ref|YP_396911.1| NifU-like protein [Prochlorococcus marinus str. MIT 9312]
gi|123968006|ref|YP_001008864.1| NifU-like protein [Prochlorococcus marinus str. AS9601]
gi|126695776|ref|YP_001090662.1| NifU-like protein [Prochlorococcus marinus str. MIT 9301]
gi|157412831|ref|YP_001483697.1| NifU-like protein [Prochlorococcus marinus str. MIT 9215]
gi|254525524|ref|ZP_05137576.1| NifU domain protein [Prochlorococcus marinus str. MIT 9202]
gi|78712298|gb|ABB49475.1| NifU-like protein [Prochlorococcus marinus str. MIT 9312]
gi|91070321|gb|ABE11238.1| NifU-like protein [uncultured Prochlorococcus marinus clone
HF10-88F10]
gi|123198116|gb|ABM69757.1| NifU-like protein [Prochlorococcus marinus str. AS9601]
gi|126542819|gb|ABO17061.1| NifU-like protein [Prochlorococcus marinus str. MIT 9301]
gi|157387406|gb|ABV50111.1| NifU-like protein [Prochlorococcus marinus str. MIT 9215]
gi|221536948|gb|EEE39401.1| NifU domain protein [Prochlorococcus marinus str. MIT 9202]
Length = 81
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ S + +++VLD +RP + DGG++ IV + ++GAC CPS++ TLK G
Sbjct: 4 ETLSLTNENVEKVLDE-LRPFLISDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDIRTV 189
+ L +PE+ ++ V
Sbjct: 63 IERKLKEMIPEISEVVQV 80
>gi|37678411|ref|NP_933020.1| putative DNA uptake protein [Vibrio vulnificus YJ016]
gi|37197150|dbj|BAC92991.1| thioredoxin-like protein [Vibrio vulnificus YJ016]
Length = 227
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 72/194 (37%), Gaps = 21/194 (10%)
Query: 13 TLKF-----IPGQVVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKD 66
T KF + + HF+N + R+F + PG + G +
Sbjct: 25 TYKFTRVFVVSNITITEAAQTHFANLLGQQPDGTNIRVFVVNPGTQNAECGVSYCPPEAV 84
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSA 116
+ + ++ P + + + D D MGS + D+
Sbjct: 85 EATDTEIPYQSFSAYVDELS--LPFLEDAEI-DYVTDKMGSQLTLKAPNAKMRKVADDAP 141
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVAN- 174
+++R++ + +V P +A GG + D G+ ++ G C+GC TLK G+
Sbjct: 142 LLERVEYAIQTQVNPQLAGHGGHVKLMEITDAGVAIVAFGGGCNGCSMVDVTLKEGIEKE 201
Query: 175 ILNHFVPEVKDIRT 188
+L F E+ +R
Sbjct: 202 LLQQFSGELTAVRD 215
>gi|22298836|ref|NP_682083.1| NifU protein [Thermosynechococcus elongatus BP-1]
gi|22295017|dbj|BAC08845.1| tsl1293 [Thermosynechococcus elongatus BP-1]
Length = 89
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD +RP + DGG++ +V L ++GAC CPS++ TL+ G+ L
Sbjct: 19 ENVEKVLDE-LRPYLMADGGNVELVEIEGPVVRLRLQGACGACPSSTMTLRMGIERKLKE 77
Query: 179 FVPEVKDIRTV 189
+PE+ +++ V
Sbjct: 78 SIPEIAEVQQV 88
>gi|323488633|ref|ZP_08093875.1| NifU-like protein [Planococcus donghaensis MPA1U2]
gi|323397651|gb|EGA90455.1| NifU-like protein [Planococcus donghaensis MPA1U2]
Length = 78
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+++ + ++ EVLD ++RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 2 TEALLEDQVMEVLD-KLRPFLLRDGGDCELVDIEDGIVKLRLLGACGSCPSSTITLKAGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L VP + ++ V
Sbjct: 61 ERALVEEVPGIVEVEQV 77
>gi|91224982|ref|ZP_01260241.1| hypothetical protein V12G01_11188 [Vibrio alginolyticus 12G01]
gi|269965876|ref|ZP_06179969.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|91190228|gb|EAS76498.1| hypothetical protein V12G01_11188 [Vibrio alginolyticus 12G01]
gi|269829429|gb|EEZ83670.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 194
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 16/185 (8%)
Query: 17 IPGQVVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRP 75
+ + HF+N + RIF + PG + G + + L
Sbjct: 1 MSNITITETAQTHFANLLGQQPEGTNIRIFVVNPGTQNAECGVSYCPPEAVESTDTELSY 60
Query: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVL 125
++ P + + + D D MGS + D+ +V+R++ V+
Sbjct: 61 SGFSAYVDELS--LPFLEDAEI-DFVTDKMGSQLTLKAPNAKMRKVADDAPLVERVEYVI 117
Query: 126 DNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEV 183
+V P +A GG + DG+ ++ G C+GC TLK G+ +LN F+ E+
Sbjct: 118 QTQVNPQLAGHGGHVNLVEITEDGVAIVAFGGGCNGCSMVDVTLKEGIEKELLNQFIGEL 177
Query: 184 KDIRT 188
+R
Sbjct: 178 TAVRD 182
>gi|148241647|ref|YP_001226804.1| NifU-like protein [Synechococcus sp. RCC307]
gi|147849957|emb|CAK27451.1| NifU-like protein [Synechococcus sp. RCC307]
Length = 88
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 103 DDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCP 162
+ + + ++ ++ LD +RP + DGG++ IV + ++GAC CP
Sbjct: 2 TTDTAAATNDPQALTLENVERTLDE-LRPFLMADGGNVEVVEIDGPIVKVRLQGACGSCP 60
Query: 163 SASETLKYGVANILNHFVPEVKDIRTV 189
S++ TLK G+ L +PEV ++ V
Sbjct: 61 SSTMTLKMGIERKLREAIPEVSEVVQV 87
>gi|91794875|ref|YP_564526.1| putative DNA uptake protein [Shewanella denitrificans OS217]
gi|119370613|sp|Q12IC3|NFUA_SHEDO RecName: Full=Fe/S biogenesis protein nfuA
gi|91716877|gb|ABE56803.1| HesB/YadR/YfhF [Shewanella denitrificans OS217]
Length = 192
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 69/181 (38%), Gaps = 16/181 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF + + R+F I PG + G + D + + + G
Sbjct: 4 ISDSAQAHFVKLLADQPAGTHIRVFVISPGTSQAECGVSYCPP--DAVESDDVELEFNGF 61
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
+ + + D D +GS + D+ +V+RI+ V+ + +
Sbjct: 62 NAMVDAKSVAYLEDASI-DFVTDQLGSQLTLKAPNAKMRKVSGDAPLVERIEYVIQSEIN 120
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNH-FVPEVKDIRT 188
P +A GG+I+ DG+ L G C+GC TLK G+ L F E+ +R
Sbjct: 121 PQLASHGGNIMLVEVTDDGVAVLQFGGGCNGCSQVDITLKDGIEKQLLDLFTGELTGVRD 180
Query: 189 V 189
V
Sbjct: 181 V 181
>gi|91200475|emb|CAJ73523.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 72
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++I+E L +RPA+ DGGDI Y DGIV + ++GAC CPS+ TLKYGV L
Sbjct: 1 MKEKIEEAL-KGIRPALQADGGDIELVDYEDGIVKVRLKGACGSCPSSLATLKYGVEARL 59
Query: 177 NHFVPEVKDIR 187
+PE++ +
Sbjct: 60 KEIIPEIESVE 70
>gi|218708212|ref|YP_002415833.1| putative DNA uptake protein [Vibrio splendidus LGP32]
gi|218321231|emb|CAV17181.1| hypothetical protein VS_0148 [Vibrio splendidus LGP32]
Length = 245
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 10/182 (5%)
Query: 17 IPGQVVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRP 75
+ + HF+N + R+F + PG + G + + L
Sbjct: 52 VSNITITETAQTHFANLLSQQPEGTNIRVFVVNPGTQNAECGVSYCPTDAIEASDTKLSF 111
Query: 76 PVLGMIME-----HFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNR 128
++ + +G + + D+ +++R++ + +
Sbjct: 112 EAFSAYVDELSLPFLDEAEIDFVTDKMGSQLTLKAPNAKMRKVSDDATLIERVEYAIQTQ 171
Query: 129 VRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDI 186
V P +A GG + +G ++ G C+GC TLK G+ +L F E+ +
Sbjct: 172 VNPQLAGHGGHVSLVEITEEGAAIVAFGGGCNGCSMVDVTLKEGIEKELLQQFEGELTAV 231
Query: 187 RT 188
R
Sbjct: 232 RD 233
>gi|295695724|ref|YP_003588962.1| nitrogen-fixing NifU domain protein [Bacillus tusciae DSM 2912]
gi|295411326|gb|ADG05818.1| nitrogen-fixing NifU domain protein [Bacillus tusciae DSM 2912]
Length = 73
Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++++E L+ R+RP + DGGD+ DG+V L + GAC CP ++ TLK G+ L
Sbjct: 2 LREKVEEALE-RIRPGLQFDGGDVELVDVEDGVVTLHLIGACGACPMSTMTLKMGIERAL 60
Query: 177 NHFVPEVKDIRTV 189
VPEVK++ V
Sbjct: 61 RAAVPEVKEVIAV 73
>gi|27364312|ref|NP_759840.1| Fe/S biogenesis protein NfuA [Vibrio vulnificus CMCP6]
gi|320157704|ref|YP_004190083.1| NfuA Fe-S protein maturation [Vibrio vulnificus MO6-24/O]
gi|27360430|gb|AAO09367.1| Protein gntY [Vibrio vulnificus CMCP6]
gi|319933016|gb|ADV87880.1| NfuA, Fe-S protein maturation [Vibrio vulnificus MO6-24/O]
Length = 207
Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/194 (19%), Positives = 72/194 (37%), Gaps = 21/194 (10%)
Query: 13 TLKF-----IPGQVVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKD 66
T KF + + HF+N + R+F + PG + G +
Sbjct: 5 TYKFTRVFVVSNITITEAAQTHFANLLGQQPDGTNIRVFVVNPGTQNAECGVSYCPPEAV 64
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSA 116
+ + ++ P + + + D D MGS + D+
Sbjct: 65 EATDTEIPYQSFSAYVDELS--LPFLEDAEI-DYVTDKMGSQLTLKAPNAKMRKVADDAP 121
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVAN- 174
+++R++ + +V P +A GG + D G+ ++ G C+GC TLK G+
Sbjct: 122 LLERVEYAIQTQVNPQLAGHGGHVKLMEITDAGVAIVAFGGGCNGCSMVDVTLKEGIEKE 181
Query: 175 ILNHFVPEVKDIRT 188
+L F E+ +R
Sbjct: 182 LLQQFSGELTAVRD 195
>gi|86605616|ref|YP_474379.1| NifU domain-containing protein [Synechococcus sp. JA-3-3Ab]
gi|86554158|gb|ABC99116.1| NifU domain protein [Synechococcus sp. JA-3-3Ab]
Length = 80
Score = 107 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ +++VL N +RP + DGG++ +V L ++GAC CPS++ TLK G+
Sbjct: 6 ELTAENVEKVL-NELRPYLQADGGNVELVEIDGPVVKLRLQGACGACPSSTLTLKMGIER 64
Query: 175 ILNHFVPEVKDIRTV 189
L +P++ ++ V
Sbjct: 65 KLRESIPDILEVEQV 79
>gi|149190638|ref|ZP_01868906.1| predicted gluconate transport associated protein [Vibrio shilonii
AK1]
gi|148835521|gb|EDL52490.1| predicted gluconate transport associated protein [Vibrio shilonii
AK1]
Length = 207
Score = 107 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 70/188 (37%), Gaps = 18/188 (9%)
Query: 16 FIPGQVVL--VEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEH 72
F+ + HF+ + R+F + PG + G + + +
Sbjct: 11 FVVSNPITITESAQSHFAKLLAQQPEGTNIRVFVVNPGTQNAECGVSYCPPEAIESNDTE 70
Query: 73 LRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIK 122
+ L ++ P + + + D D MGS + D+ +++R++
Sbjct: 71 FKYEALSAYVDELS--LPFLEDAEI-DFVTDKMGSQLTLKAPNAKMRKVADDAPLMERVE 127
Query: 123 EVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFV 180
+ +V P +A GG + DGI + G C+GC TLK G+ +L F
Sbjct: 128 YAIQTQVNPQLAGHGGHVSLMEITEDGIAIVQFGGGCNGCSMVDVTLKEGIEKQLLQEFS 187
Query: 181 PEVKDIRT 188
E+ +R
Sbjct: 188 GELTAVRD 195
>gi|51701957|sp|Q6LVQ9|NFUA_PHOPR RecName: Full=Fe/S biogenesis protein nfuA
gi|46911818|emb|CAG18616.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 194
Score = 107 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 67/182 (36%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F + PG + G + + + +
Sbjct: 5 TITESAQQHFGKLLAQQPEGTNIRVFVVNPGTQNAECGVSYCPPEAVEASDTKIELELFD 64
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D MGS + D+ +++R+ + +V
Sbjct: 65 AYLDELS--LPFLDDAEI-DFVTDKMGSQLTLKAPNAKVRKVSDDATLMERVDYAIQTQV 121
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIR 187
P +A GG++ DG+ L G C+GC TLK G+ +L F E+ +R
Sbjct: 122 NPQLAGHGGNVSLAEITEDGVAILQFGGGCNGCSMVDVTLKEGIEKELLAQFAGELTGVR 181
Query: 188 TV 189
V
Sbjct: 182 DV 183
>gi|229557969|ref|YP_128418.2| putative DNA uptake protein [Photobacterium profundum SS9]
Length = 192
Score = 107 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 67/182 (36%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F + PG + G + + + +
Sbjct: 3 TITESAQQHFGKLLAQQPEGTNIRVFVVNPGTQNAECGVSYCPPEAVEASDTKIELELFD 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D MGS + D+ +++R+ + +V
Sbjct: 63 AYLDELS--LPFLDDAEI-DFVTDKMGSQLTLKAPNAKVRKVSDDATLMERVDYAIQTQV 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIR 187
P +A GG++ DG+ L G C+GC TLK G+ +L F E+ +R
Sbjct: 120 NPQLAGHGGNVSLAEITEDGVAILQFGGGCNGCSMVDVTLKEGIEKELLAQFAGELTGVR 179
Query: 188 TV 189
V
Sbjct: 180 DV 181
>gi|30022992|ref|NP_834623.1| NifU protein [Bacillus cereus ATCC 14579]
gi|30264992|ref|NP_847369.1| NifU domain-containing protein [Bacillus anthracis str. Ames]
gi|42784132|ref|NP_981379.1| NifU domain-containing protein [Bacillus cereus ATCC 10987]
gi|47530492|ref|YP_021841.1| NifU domain-containing protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|47566983|ref|ZP_00237700.1| NifU protein-related protein [Bacillus cereus G9241]
gi|49187811|ref|YP_031064.1| NifU domain-containing protein [Bacillus anthracis str. Sterne]
gi|49481022|ref|YP_038969.1| NifU domain-containing protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52140580|ref|YP_086250.1| NifU domain-containing protein [Bacillus cereus E33L]
gi|75758910|ref|ZP_00739021.1| NifU protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|118480036|ref|YP_897187.1| NifU-like domain-containing protein [Bacillus thuringiensis str. Al
Hakam]
gi|163942665|ref|YP_001647549.1| NifU domain-containing protein [Bacillus weihenstephanensis KBAB4]
gi|165870953|ref|ZP_02215605.1| nifU domain protein [Bacillus anthracis str. A0488]
gi|167634861|ref|ZP_02393179.1| nifU domain protein [Bacillus anthracis str. A0442]
gi|167639907|ref|ZP_02398175.1| nifU domain protein [Bacillus anthracis str. A0193]
gi|170685656|ref|ZP_02876879.1| nifU domain protein [Bacillus anthracis str. A0465]
gi|170706993|ref|ZP_02897450.1| nifU domain protein [Bacillus anthracis str. A0389]
gi|177652329|ref|ZP_02934832.1| nifU domain protein [Bacillus anthracis str. A0174]
gi|190567150|ref|ZP_03020065.1| nifU domain protein [Bacillus anthracis Tsiankovskii-I]
gi|196033148|ref|ZP_03100561.1| nifU domain protein [Bacillus cereus W]
gi|196040592|ref|ZP_03107892.1| nifU domain protein [Bacillus cereus NVH0597-99]
gi|196043939|ref|ZP_03111176.1| nifU domain protein [Bacillus cereus 03BB108]
gi|206970391|ref|ZP_03231344.1| nifU domain protein [Bacillus cereus AH1134]
gi|206976476|ref|ZP_03237383.1| nifU domain protein [Bacillus cereus H3081.97]
gi|217962417|ref|YP_002340989.1| nifU domain protein [Bacillus cereus AH187]
gi|218235090|ref|YP_002369752.1| nifU domain protein [Bacillus cereus B4264]
gi|218900105|ref|YP_002448516.1| nifU domain protein [Bacillus cereus G9842]
gi|218906144|ref|YP_002453978.1| nifU domain protein [Bacillus cereus AH820]
gi|222098402|ref|YP_002532460.1| nitrogen-fixing nifu domain protein [Bacillus cereus Q1]
gi|225866921|ref|YP_002752299.1| nifU domain protein [Bacillus cereus 03BB102]
gi|227817723|ref|YP_002817732.1| nifU domain protein [Bacillus anthracis str. CDC 684]
gi|228903455|ref|ZP_04067581.1| hypothetical protein bthur0014_46170 [Bacillus thuringiensis IBL
4222]
gi|228910790|ref|ZP_04074599.1| hypothetical protein bthur0013_49320 [Bacillus thuringiensis IBL
200]
gi|228917578|ref|ZP_04081122.1| hypothetical protein bthur0012_47840 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228923687|ref|ZP_04086965.1| hypothetical protein bthur0011_46620 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228929976|ref|ZP_04092987.1| hypothetical protein bthur0010_46580 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228936248|ref|ZP_04099047.1| hypothetical protein bthur0009_46860 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228942118|ref|ZP_04104658.1| hypothetical protein bthur0008_47490 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228948675|ref|ZP_04110953.1| hypothetical protein bthur0007_47990 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228955216|ref|ZP_04117224.1| hypothetical protein bthur0006_45740 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228961200|ref|ZP_04122821.1| hypothetical protein bthur0005_46480 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228968061|ref|ZP_04129067.1| hypothetical protein bthur0004_48450 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228975048|ref|ZP_04135607.1| hypothetical protein bthur0003_47960 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981687|ref|ZP_04141982.1| hypothetical protein bthur0002_48460 [Bacillus thuringiensis Bt407]
gi|228988194|ref|ZP_04148291.1| hypothetical protein bthur0001_48520 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229014137|ref|ZP_04171258.1| hypothetical protein bmyco0001_45420 [Bacillus mycoides DSM 2048]
gi|229020189|ref|ZP_04176962.1| hypothetical protein bcere0030_46810 [Bacillus cereus AH1273]
gi|229026415|ref|ZP_04182772.1| hypothetical protein bcere0029_46920 [Bacillus cereus AH1272]
gi|229049643|ref|ZP_04194200.1| hypothetical protein bcere0027_46010 [Bacillus cereus AH676]
gi|229062619|ref|ZP_04199928.1| hypothetical protein bcere0026_46850 [Bacillus cereus AH603]
gi|229072441|ref|ZP_04205643.1| hypothetical protein bcere0025_46020 [Bacillus cereus F65185]
gi|229076327|ref|ZP_04209292.1| hypothetical protein bcere0024_46310 [Bacillus cereus Rock4-18]
gi|229082198|ref|ZP_04214662.1| hypothetical protein bcere0023_48160 [Bacillus cereus Rock4-2]
gi|229094055|ref|ZP_04225139.1| hypothetical protein bcere0021_47700 [Bacillus cereus Rock3-42]
gi|229099409|ref|ZP_04230339.1| hypothetical protein bcere0020_46280 [Bacillus cereus Rock3-29]
gi|229105568|ref|ZP_04236202.1| hypothetical protein bcere0019_46970 [Bacillus cereus Rock3-28]
gi|229112395|ref|ZP_04241933.1| hypothetical protein bcere0018_46350 [Bacillus cereus Rock1-15]
gi|229118422|ref|ZP_04247776.1| hypothetical protein bcere0017_46890 [Bacillus cereus Rock1-3]
gi|229124488|ref|ZP_04253673.1| hypothetical protein bcere0016_47720 [Bacillus cereus 95/8201]
gi|229130213|ref|ZP_04259172.1| hypothetical protein bcere0015_46490 [Bacillus cereus BDRD-Cer4]
gi|229141670|ref|ZP_04270200.1| hypothetical protein bcere0013_47600 [Bacillus cereus BDRD-ST26]
gi|229147497|ref|ZP_04275844.1| hypothetical protein bcere0012_46260 [Bacillus cereus BDRD-ST24]
gi|229153141|ref|ZP_04281320.1| hypothetical protein bcere0011_46710 [Bacillus cereus m1550]
gi|229158547|ref|ZP_04286606.1| hypothetical protein bcere0010_47200 [Bacillus cereus ATCC 4342]
gi|229163931|ref|ZP_04291871.1| hypothetical protein bcere0009_46940 [Bacillus cereus R309803]
gi|229169674|ref|ZP_04297374.1| hypothetical protein bcere0007_46180 [Bacillus cereus AH621]
gi|229175651|ref|ZP_04303159.1| hypothetical protein bcere0006_47280 [Bacillus cereus MM3]
gi|229181250|ref|ZP_04308580.1| hypothetical protein bcere0005_45920 [Bacillus cereus 172560W]
gi|229187187|ref|ZP_04314332.1| hypothetical protein bcere0004_47230 [Bacillus cereus BGSC 6E1]
gi|229193231|ref|ZP_04320182.1| hypothetical protein bcere0002_48780 [Bacillus cereus ATCC 10876]
gi|229199099|ref|ZP_04325782.1| hypothetical protein bcere0001_46120 [Bacillus cereus m1293]
gi|229604077|ref|YP_002869195.1| nifU domain protein [Bacillus anthracis str. A0248]
gi|254687285|ref|ZP_05151142.1| nifU domain protein [Bacillus anthracis str. CNEVA-9066]
gi|254725297|ref|ZP_05187080.1| nifU domain protein [Bacillus anthracis str. A1055]
gi|254735378|ref|ZP_05193086.1| nifU domain protein [Bacillus anthracis str. Western North America
USA6153]
gi|254740645|ref|ZP_05198336.1| nifU domain protein [Bacillus anthracis str. Kruger B]
gi|254753093|ref|ZP_05205129.1| nifU domain protein [Bacillus anthracis str. Vollum]
gi|254761435|ref|ZP_05213456.1| nifU domain protein [Bacillus anthracis str. Australia 94]
gi|296505392|ref|YP_003667092.1| NifU protein [Bacillus thuringiensis BMB171]
gi|301056437|ref|YP_003794648.1| nitrogen-fixing NifU domain-containing protein [Bacillus anthracis
CI]
gi|29898552|gb|AAP11824.1| NifU protein [Bacillus cereus ATCC 14579]
gi|30259669|gb|AAP28855.1| nifU domain protein [Bacillus anthracis str. Ames]
gi|42740063|gb|AAS43987.1| nifU domain protein [Bacillus cereus ATCC 10987]
gi|47505640|gb|AAT34316.1| nifU domain protein [Bacillus anthracis str. 'Ames Ancestor']
gi|47556301|gb|EAL14635.1| NifU protein-related protein [Bacillus cereus G9241]
gi|49181738|gb|AAT57114.1| nifU domain protein [Bacillus anthracis str. Sterne]
gi|49332578|gb|AAT63224.1| nitrogen-fixing NifU domain protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51974049|gb|AAU15599.1| nitrogen-fixing NifU domain protein [Bacillus cereus E33L]
gi|74493584|gb|EAO56689.1| NifU protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|118419261|gb|ABK87680.1| NifU-like domain protein [Bacillus thuringiensis str. Al Hakam]
gi|163864862|gb|ABY45921.1| nitrogen-fixing NifU domain protein [Bacillus weihenstephanensis
KBAB4]
gi|164713462|gb|EDR18987.1| nifU domain protein [Bacillus anthracis str. A0488]
gi|167511988|gb|EDR87366.1| nifU domain protein [Bacillus anthracis str. A0193]
gi|167529611|gb|EDR92360.1| nifU domain protein [Bacillus anthracis str. A0442]
gi|170128096|gb|EDS96966.1| nifU domain protein [Bacillus anthracis str. A0389]
gi|170670120|gb|EDT20860.1| nifU domain protein [Bacillus anthracis str. A0465]
gi|172082335|gb|EDT67401.1| nifU domain protein [Bacillus anthracis str. A0174]
gi|190561654|gb|EDV15624.1| nifU domain protein [Bacillus anthracis Tsiankovskii-I]
gi|195994577|gb|EDX58532.1| nifU domain protein [Bacillus cereus W]
gi|196025275|gb|EDX63945.1| nifU domain protein [Bacillus cereus 03BB108]
gi|196028724|gb|EDX67331.1| nifU domain protein [Bacillus cereus NVH0597-99]
gi|206734968|gb|EDZ52137.1| nifU domain protein [Bacillus cereus AH1134]
gi|206745400|gb|EDZ56800.1| nifU domain protein [Bacillus cereus H3081.97]
gi|217063374|gb|ACJ77624.1| nifU domain protein [Bacillus cereus AH187]
gi|218163047|gb|ACK63039.1| nifU domain protein [Bacillus cereus B4264]
gi|218538404|gb|ACK90802.1| nifU domain protein [Bacillus cereus AH820]
gi|218541315|gb|ACK93709.1| nifU domain protein [Bacillus cereus G9842]
gi|221242461|gb|ACM15171.1| nitrogen-fixing NifU domain protein [Bacillus cereus Q1]
gi|225790034|gb|ACO30251.1| nifU domain protein [Bacillus cereus 03BB102]
gi|227002453|gb|ACP12196.1| nifU domain protein [Bacillus anthracis str. CDC 684]
gi|228584370|gb|EEK42505.1| hypothetical protein bcere0001_46120 [Bacillus cereus m1293]
gi|228590208|gb|EEK48076.1| hypothetical protein bcere0002_48780 [Bacillus cereus ATCC 10876]
gi|228596197|gb|EEK53872.1| hypothetical protein bcere0004_47230 [Bacillus cereus BGSC 6E1]
gi|228602143|gb|EEK59634.1| hypothetical protein bcere0005_45920 [Bacillus cereus 172560W]
gi|228607792|gb|EEK65106.1| hypothetical protein bcere0006_47280 [Bacillus cereus MM3]
gi|228613713|gb|EEK70838.1| hypothetical protein bcere0007_46180 [Bacillus cereus AH621]
gi|228619552|gb|EEK76438.1| hypothetical protein bcere0009_46940 [Bacillus cereus R309803]
gi|228624861|gb|EEK81629.1| hypothetical protein bcere0010_47200 [Bacillus cereus ATCC 4342]
gi|228630240|gb|EEK86890.1| hypothetical protein bcere0011_46710 [Bacillus cereus m1550]
gi|228635923|gb|EEK92406.1| hypothetical protein bcere0012_46260 [Bacillus cereus BDRD-ST24]
gi|228641738|gb|EEK98039.1| hypothetical protein bcere0013_47600 [Bacillus cereus BDRD-ST26]
gi|228653146|gb|EEL09025.1| hypothetical protein bcere0015_46490 [Bacillus cereus BDRD-Cer4]
gi|228658828|gb|EEL14483.1| hypothetical protein bcere0016_47720 [Bacillus cereus 95/8201]
gi|228664992|gb|EEL20480.1| hypothetical protein bcere0017_46890 [Bacillus cereus Rock1-3]
gi|228671043|gb|EEL26349.1| hypothetical protein bcere0018_46350 [Bacillus cereus Rock1-15]
gi|228677838|gb|EEL32081.1| hypothetical protein bcere0019_46970 [Bacillus cereus Rock3-28]
gi|228684033|gb|EEL37981.1| hypothetical protein bcere0020_46280 [Bacillus cereus Rock3-29]
gi|228689267|gb|EEL43086.1| hypothetical protein bcere0021_47700 [Bacillus cereus Rock3-42]
gi|228701116|gb|EEL53638.1| hypothetical protein bcere0023_48160 [Bacillus cereus Rock4-2]
gi|228706762|gb|EEL58970.1| hypothetical protein bcere0024_46310 [Bacillus cereus Rock4-18]
gi|228710417|gb|EEL62390.1| hypothetical protein bcere0025_46020 [Bacillus cereus F65185]
gi|228716589|gb|EEL68286.1| hypothetical protein bcere0026_46850 [Bacillus cereus AH603]
gi|228722556|gb|EEL73944.1| hypothetical protein bcere0027_46010 [Bacillus cereus AH676]
gi|228734878|gb|EEL85516.1| hypothetical protein bcere0029_46920 [Bacillus cereus AH1272]
gi|228741085|gb|EEL91310.1| hypothetical protein bcere0030_46810 [Bacillus cereus AH1273]
gi|228747091|gb|EEL96973.1| hypothetical protein bmyco0001_45420 [Bacillus mycoides DSM 2048]
gi|228771491|gb|EEM19960.1| hypothetical protein bthur0001_48520 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228777799|gb|EEM26071.1| hypothetical protein bthur0002_48460 [Bacillus thuringiensis Bt407]
gi|228784569|gb|EEM32589.1| hypothetical protein bthur0003_47960 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228791616|gb|EEM39212.1| hypothetical protein bthur0004_48450 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228798494|gb|EEM45486.1| hypothetical protein bthur0005_46480 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228804349|gb|EEM50960.1| hypothetical protein bthur0006_45740 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228810982|gb|EEM57325.1| hypothetical protein bthur0007_47990 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228817452|gb|EEM63537.1| hypothetical protein bthur0008_47490 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228823364|gb|EEM69197.1| hypothetical protein bthur0009_46860 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228829656|gb|EEM75282.1| hypothetical protein bthur0010_46580 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228835816|gb|EEM81179.1| hypothetical protein bthur0011_46620 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228842058|gb|EEM87161.1| hypothetical protein bthur0012_47840 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228848741|gb|EEM93586.1| hypothetical protein bthur0013_49320 [Bacillus thuringiensis IBL
200]
gi|228856185|gb|EEN00719.1| hypothetical protein bthur0014_46170 [Bacillus thuringiensis IBL
4222]
gi|229268485|gb|ACQ50122.1| nifU domain protein [Bacillus anthracis str. A0248]
gi|296326444|gb|ADH09372.1| NifU protein [Bacillus thuringiensis BMB171]
gi|300378606|gb|ADK07510.1| nitrogen-fixing NifU domain protein [Bacillus cereus biovar
anthracis str. CI]
gi|324328882|gb|ADY24142.1| nitrogen-fixing NifU domain-containing protein [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|326942769|gb|AEA18665.1| NifU protein [Bacillus thuringiensis serovar chinensis CT-43]
Length = 78
Score = 107 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + +++ EVLD ++RP + RDGGD+ +GIV L + GAC CPS++ TLK G+
Sbjct: 2 ENPHMQEQVLEVLD-KLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L VP V ++ V
Sbjct: 61 ERALLEEVPGVIEVEQV 77
>gi|116781227|gb|ABK22014.1| unknown [Picea sitchensis]
Length = 238
Score = 107 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 93 HNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFL 152
G ++ + + + V+ I+ +LD VRP + DGG++ +V L
Sbjct: 65 SRQTRGKHVIEAIATPPTTGGLALTVENIEMILDE-VRPYLMADGGNVELHEIDGNVVTL 123
Query: 153 SMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
++GAC CPS+ T+K G+ L +PE+ ++ V
Sbjct: 124 KLQGACGSCPSSMTTMKTGIEGRLMEKIPEIIAVKQV 160
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGG-DIVFKGYRDGIVFLSMRGACSGCPSAS-ETL 168
+E+ + + E + +RP ++ GG D+ F D +V + + G P+A T+
Sbjct: 163 METGLELTEENVEKILAEIRPYLSGTGGGDLEFVKIDDPVVKVRISG-----PAAEVMTV 217
Query: 169 KYGVANILNHFVPEVKDIR 187
+ + L +P + ++
Sbjct: 218 RVALTQKLREKIPAIAAVQ 236
>gi|87125583|ref|ZP_01081428.1| NifU-like protein [Synechococcus sp. RS9917]
gi|86166883|gb|EAQ68145.1| NifU-like protein [Synechococcus sp. RS9917]
Length = 81
Score = 107 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + +++VLD +RP + DGG++ +V + ++GAC CPS++ TLK G
Sbjct: 4 ETLPLSSENVEKVLDE-LRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDIRTV 189
+ L +PEV ++ V
Sbjct: 63 IERKLREMIPEVSEVVQV 80
>gi|113972131|ref|YP_735924.1| putative DNA uptake protein [Shewanella sp. MR-4]
gi|117922434|ref|YP_871626.1| putative DNA uptake protein [Shewanella sp. ANA-3]
gi|119370615|sp|Q0HDK0|NFUA_SHESM RecName: Full=Fe/S biogenesis protein nfuA
gi|150383449|sp|A0L2F1|NFUA_SHESA RecName: Full=Fe/S biogenesis protein nfuA
gi|113886815|gb|ABI40867.1| HesB/YadR/YfhF-family protein [Shewanella sp. MR-4]
gi|117614766|gb|ABK50220.1| HesB/YadR/YfhF-family protein [Shewanella sp. ANA-3]
Length = 192
Score = 107 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 68/182 (37%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F I PG A G + D + + + G
Sbjct: 3 TISDAAQAHFVKLLADQPEGTHIRVFVISPGTAQAECGVSYCPP--DAVESDDIELEFNG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
P + + D D +GS + SD+ + +R++ V+ + +
Sbjct: 61 FSAMVDEKSAPFLEEASI-DFVTDQLGSQLTLKAPNAKMRKVASDAPLAERVEYVIQSEI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIR 187
P +A GG+I+ ++G+ L G C+GC TLK G+ L P E+ +
Sbjct: 120 NPQLASHGGNIMLVEITQEGVAVLQFGGGCNGCSQVDITLKDGIEKQLLDMFPGELSGVS 179
Query: 188 TV 189
V
Sbjct: 180 DV 181
>gi|119493943|ref|ZP_01624504.1| putative NifU-like protein [Lyngbya sp. PCC 8106]
gi|119452300|gb|EAW33495.1| putative NifU-like protein [Lyngbya sp. PCC 8106]
Length = 79
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + ++ VLD +RP + DGG++ IV L ++GAC CPS++ TLK G+
Sbjct: 3 DLALTPENVETVLDE-LRPYLMADGGNVEIVELDGPIVRLRLQGACGSCPSSTMTLKMGI 61
Query: 173 ANILNHFVPEVKDIRTV 189
L +PE+ ++ V
Sbjct: 62 ERRLREKIPEIAEVVAV 78
>gi|332289242|ref|YP_004420094.1| putative DNA uptake protein [Gallibacterium anatis UMN179]
gi|330432138|gb|AEC17197.1| putative DNA uptake protein [Gallibacterium anatis UMN179]
Length = 194
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 68/175 (38%), Gaps = 16/175 (9%)
Query: 28 IHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFI 86
HF + + RIF + PG + G + + ++ ++
Sbjct: 12 AHFRKLLDQQEEGTNIRIFVVNPGTPNAECGVSYCPKSAVEATDHEMKYETFSAFVDELS 71
Query: 87 SGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVRPAVARD 136
P + + + D D+MGS + D+ +++R++ V+ ++ P +A
Sbjct: 72 --LPFLEDAEI-DFVTDEMGSQLTLKAPNAKMRKVADDAPLIERVEYVIQTQINPQLANH 128
Query: 137 GGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRTV 189
GG I D G L G C+GC TLK GV +L F E+ ++ V
Sbjct: 129 GGRITLIEITDKGEAILQFGGGCNGCSMVDVTLKDGVEKQLLAQFEGELTGVKDV 183
>gi|229032593|ref|ZP_04188558.1| hypothetical protein bcere0028_46300 [Bacillus cereus AH1271]
gi|229135778|ref|ZP_04264548.1| hypothetical protein bcere0014_46610 [Bacillus cereus BDRD-ST196]
gi|228647644|gb|EEL03709.1| hypothetical protein bcere0014_46610 [Bacillus cereus BDRD-ST196]
gi|228728778|gb|EEL79789.1| hypothetical protein bcere0028_46300 [Bacillus cereus AH1271]
Length = 78
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + +++ EVLD ++RP + RDGGD+ +GIV L + GAC CPS++ TLK G+
Sbjct: 2 ENPHMEEQVLEVLD-KLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L VP V ++ V
Sbjct: 61 ERALLEEVPGVIEVEQV 77
>gi|312882897|ref|ZP_07742629.1| putative DNA uptake protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369416|gb|EFP96936.1| putative DNA uptake protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 195
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 10/177 (5%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRP-PVLG 79
+ HF+N + R+F + PG + G + + L+
Sbjct: 7 ITETAQKHFANLLSQQSEGTHIRVFVVNPGTQNAECGVSYCPPEAVESTDTELKFADFSA 66
Query: 80 MIME----HFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNRVRPAV 133
I E + +G + + D+ +++R++ + +V P +
Sbjct: 67 FIDELSLPFLEDAEIDFVTDKMGSQLTLKAPNAKMRKVNDDAPLIERVEYAIQTQVNPQL 126
Query: 134 ARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
A GG++ +G+ ++ G C+GC TLK G+ +L F E+ +R
Sbjct: 127 ASHGGNVNLIEITEEGVAIVAFGGGCNGCSMVDVTLKEGIEKELLQQFEGELTAVRD 183
>gi|308047919|ref|YP_003911485.1| IscR-regulated protein YhgI [Ferrimonas balearica DSM 9799]
gi|307630109|gb|ADN74411.1| IscR-regulated protein YhgI [Ferrimonas balearica DSM 9799]
Length = 192
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 69/182 (37%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ ++ R+F I PG G + D + + + P G
Sbjct: 3 TITEAAQAHFAKLLSSQPEGTNIRVFVINPGTPQAECGVSYCPP--DAVEADDIELPFEG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
P + + + D D +GS + D+ + R++ V+ ++V
Sbjct: 61 FNAMVDEKSAPFLDDALI-DYVTDQLGSQLTLKAPNAKMRKVADDAPLRDRVEYVIQSQV 119
Query: 130 RPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIR 187
P +A GG I DGI + G C+GC TLK G+ +L F E+ ++
Sbjct: 120 NPQLAGHGGFITLMELTDDGIAVIQFGGGCNGCSMVDVTLKDGIEKQLLEEFSGELTAVK 179
Query: 188 TV 189
V
Sbjct: 180 DV 181
>gi|119511776|ref|ZP_01630878.1| Nitrogen-fixing NifU-like protein [Nodularia spumigena CCY9414]
gi|119463549|gb|EAW44484.1| Nitrogen-fixing NifU-like protein [Nodularia spumigena CCY9414]
Length = 76
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ ++ VLD +RP + DGG++ IV L ++GAC CPS++ TL+ G+
Sbjct: 2 ELTTENVETVLDE-MRPYLMSDGGNVELVELDGPIVKLRLQGACGSCPSSAMTLRMGIER 60
Query: 175 ILNHFVPEVKDIRTV 189
L +PE+ +I V
Sbjct: 61 RLKEMIPEIAEIEQV 75
>gi|116072270|ref|ZP_01469537.1| NifU-like protein [Synechococcus sp. BL107]
gi|116064792|gb|EAU70551.1| NifU-like protein [Synechococcus sp. BL107]
Length = 81
Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + ++ ++ VLD +RP + DGG++ IV + ++GAC CPS++ TLK G
Sbjct: 4 ETKALTLENVETVLDE-LRPFLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDIRTV 189
+ + +PEV ++ V
Sbjct: 63 IERKMRESIPEVSEVVQV 80
>gi|323494586|ref|ZP_08099690.1| Fe/S biogenesis protein NfuA [Vibrio brasiliensis LMG 20546]
gi|323311189|gb|EGA64349.1| Fe/S biogenesis protein NfuA [Vibrio brasiliensis LMG 20546]
Length = 195
Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 69/181 (38%), Gaps = 16/181 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+N + R+F + PG + G + + L
Sbjct: 6 TITETAQKHFANLLGQQPDGTNIRVFVVNPGTQNAECGVSYCPPEAVEATDTELAFESFS 65
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D MGS + D+ +V+R++ V+ +V
Sbjct: 66 AYVDELS--LPFLEDAEI-DFVTDKMGSQLTLKAPNAKMRKVSDDAPLVERVEYVIQTQV 122
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIR 187
P +A GG + +G+ ++ G C+GC TLK G+ +L F E+ +R
Sbjct: 123 NPQLAGHGGHVNLVEITEEGVAIVAFGGGCNGCSMVDVTLKEGIEKELLQQFEGELSAVR 182
Query: 188 T 188
Sbjct: 183 D 183
>gi|228993673|ref|ZP_04153580.1| hypothetical protein bpmyx0001_43990 [Bacillus pseudomycoides DSM
12442]
gi|228999709|ref|ZP_04159285.1| hypothetical protein bmyco0003_42630 [Bacillus mycoides Rock3-17]
gi|229007266|ref|ZP_04164867.1| hypothetical protein bmyco0002_41480 [Bacillus mycoides Rock1-4]
gi|229087461|ref|ZP_04219595.1| hypothetical protein bcere0022_40270 [Bacillus cereus Rock3-44]
gi|228695883|gb|EEL48734.1| hypothetical protein bcere0022_40270 [Bacillus cereus Rock3-44]
gi|228754020|gb|EEM03457.1| hypothetical protein bmyco0002_41480 [Bacillus mycoides Rock1-4]
gi|228760071|gb|EEM09041.1| hypothetical protein bmyco0003_42630 [Bacillus mycoides Rock3-17]
gi|228766102|gb|EEM14749.1| hypothetical protein bpmyx0001_43990 [Bacillus pseudomycoides DSM
12442]
Length = 78
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + +++ EVLD ++RP + RDGGD+ +GIV L + GAC CPS++ TLK G+
Sbjct: 2 ENPNMQEQVLEVLD-KLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L VP V ++ V
Sbjct: 61 ERALLEEVPGVIEVEQV 77
>gi|229916513|ref|YP_002885159.1| nitrogen-fixing NifU domain protein [Exiguobacterium sp. AT1b]
gi|229467942|gb|ACQ69714.1| nitrogen-fixing NifU domain protein [Exiguobacterium sp. AT1b]
Length = 75
Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +++EVLD ++RP + RDGGD+ +GIV L + GAC CPS++ TLK G+
Sbjct: 2 EMFDQVQEVLD-KLRPFLLRDGGDVELVDVEEGIVKLRLMGACGSCPSSTITLKAGIERA 60
Query: 176 LNHFVPEVKDIRTV 189
L VP + ++ V
Sbjct: 61 LIEEVPGIVEVEQV 74
>gi|225446006|ref|XP_002268218.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297735420|emb|CBI17860.3| unnamed protein product [Vitis vinifera]
Length = 237
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ +++VLD VRP + DGG++ +V L ++GAC CPS++ TLK G+ L
Sbjct: 86 TEENVEKVLDE-VRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRL 144
Query: 177 NHFVPEVKDIRTV 189
+PE++ + +
Sbjct: 145 RDKIPEIEAVEQI 157
Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 100 MKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGAC 158
+++ + E+ + + E + +RP +A GG + D ++ + + G
Sbjct: 149 PEIEAVEQILDTETGLELNEENVEKVLAEIRPYLAGTGGGVLELVQINDYVIKVRLSGPA 208
Query: 159 SGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+G T++ + L +P + ++ +
Sbjct: 209 AG----VMTVRVALTQKLREKIPAIAAVQLI 235
>gi|33866219|ref|NP_897778.1| NifU-like protein [Synechococcus sp. WH 8102]
gi|78212340|ref|YP_381119.1| NifU-like protein [Synechococcus sp. CC9605]
gi|33639194|emb|CAE08202.1| NifU-like protein [Synechococcus sp. WH 8102]
gi|78196799|gb|ABB34564.1| NifU-like protein [Synechococcus sp. CC9605]
Length = 81
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + ++ +++VLD +RP + DGG++ IV + ++GAC CPS++ TLK G
Sbjct: 4 ETMALTLENVEKVLDE-LRPFLMADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDIRTV 189
+ + +PEV ++ V
Sbjct: 63 IERKMRESIPEVSEVVQV 80
>gi|186681985|ref|YP_001865181.1| NifU domain-containing protein [Nostoc punctiforme PCC 73102]
gi|186464437|gb|ACC80238.1| nitrogen-fixing NifU domain protein [Nostoc punctiforme PCC 73102]
Length = 76
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ ++ VLD +RP + DGG++ +V L ++GAC CPS++ TL+ G+
Sbjct: 2 ELTIDNVETVLDE-MRPYLMSDGGNVELVELDGPVVKLRLQGACGSCPSSAMTLRMGIER 60
Query: 175 ILNHFVPEVKDIRTV 189
L +PE+ +I V
Sbjct: 61 RLKEMIPEIAEIEQV 75
>gi|237807285|ref|YP_002891725.1| putative DNA uptake protein [Tolumonas auensis DSM 9187]
gi|259511747|sp|C4LA10|NFUA_TOLAT RecName: Full=Fe/S biogenesis protein nfuA
gi|237499546|gb|ACQ92139.1| IscR-regulated protein YhgI [Tolumonas auensis DSM 9187]
Length = 192
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 67/174 (38%), Gaps = 15/174 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF E + R+F + PG + G + D + E R P G
Sbjct: 3 TISESAQAHFRKLLEKQAENTNIRVFVMNPGTPNAECGVSYCPP--DAVEPEDSRQPFDG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
+ P + + D D MGS ++ ++++ +R++ VL ++V
Sbjct: 61 FDAIIDPNSAPFLEEAAI-DFISDQMGSQLTLKAPNAKMRKVDDNASLAERVEYVLQSQV 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
P++A GG + DG+ L G C+GC TLK G+ L P
Sbjct: 120 NPSLAAHGGRVTLTEITDDGVAILQFGGGCNGCSMVDVTLKEGIEKQLLELFPG 173
>gi|152012745|gb|AAI50438.1| Hirip5 protein [Danio rerio]
Length = 157
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKE---AEISPLASRIFSIPGIASVYFG 57
MFIQT+DTPNP +LKF+PG+ VL G + F+ ++ A+ +P + I +
Sbjct: 51 MFIQTQDTPNPNSLKFLPGRAVLDSGTMDFAGPRDAPRADTAPSEDDDEVVAMIKELLDT 110
Query: 58 YDFITVGKD---QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDM 100
TV +D + +W+ ++P V IM+ F SG P+++
Sbjct: 111 RIRPTVQEDGSGETEWKVIKPDVFATIMDFFTSGLPVVNEADAPSS 156
Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 14/102 (13%)
Query: 51 IASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGL--GDMKLDDMGSG 108
+V+ FI +D + L+ F+ G ++ +G + +
Sbjct: 43 TTTVFIRNMFIQ-TQDTPNPNSLK----------FLPGRAVLDSGTMDFAGPRDAPRADT 91
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDG-GDIVFKGYRDGI 149
E D VV IKE+LD R+RP V DG G+ +K + +
Sbjct: 92 APSEDDDEVVAMIKELLDTRIRPTVQEDGSGETEWKVIKPDV 133
>gi|78185152|ref|YP_377587.1| NifU-like protein [Synechococcus sp. CC9902]
gi|78169446|gb|ABB26543.1| NifU-like protein [Synechococcus sp. CC9902]
Length = 81
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + + +++VLD +RP + DGG++ IV + ++GAC CPS++ TLK G
Sbjct: 4 ETMALTLDNVEKVLDE-LRPFLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDIRTV 189
+ + +PEV ++ V
Sbjct: 63 IERKMRESIPEVSEVVQV 80
>gi|282900620|ref|ZP_06308562.1| Nitrogen-fixing NifU-like protein [Cylindrospermopsis raciborskii
CS-505]
gi|281194420|gb|EFA69375.1| Nitrogen-fixing NifU-like protein [Cylindrospermopsis raciborskii
CS-505]
Length = 76
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
++ ++ VLD +RP + DGG++ IV L ++GAC CPS++ TL+ G+
Sbjct: 2 ELTLENVETVLDE-MRPYLISDGGNVEVVELDGPIVKLRLQGACGSCPSSTMTLRMGIER 60
Query: 175 ILNHFVPEVKDIRTV 189
L +PE+ ++ V
Sbjct: 61 RLKEMIPEIGEVEQV 75
>gi|18423084|ref|NP_568715.1| NFU2 (NIFU-LIKE PROTEIN 2); structural molecule [Arabidopsis
thaliana]
gi|75163219|sp|Q93W20|NIFU2_ARATH RecName: Full=NifU-like protein 2, chloroplastic; Short=AtCNfu2;
Short=AtCnfU-V; Flags: Precursor
gi|13878181|gb|AAK44168.1|AF370353_1 unknown protein [Arabidopsis thaliana]
gi|16226434|gb|AAL16167.1|AF428399_1 AT5g49940/K9P8_8 [Arabidopsis thaliana]
gi|17104539|gb|AAL34158.1| unknown protein [Arabidopsis thaliana]
gi|26452324|dbj|BAC43248.1| unknown protein [Arabidopsis thaliana]
gi|28207818|emb|CAD55559.1| NFU2 protein [Arabidopsis thaliana]
gi|332008490|gb|AED95873.1| NifU-like protein 2 [Arabidopsis thaliana]
Length = 235
Score = 107 bits (267), Expect = 9e-22, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD +RP + DGG++ IV + ++GAC CPS++ T+K G+ L
Sbjct: 86 TEENVESVLDE-IRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRL 144
Query: 177 NHFVPEVKDIRT 188
+PE+ +
Sbjct: 145 MEKIPEIVAVEA 156
Score = 40.9 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 119 QRIKEVLDNRVRPAVARDG-GDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I++VL+ +RP + G + D IV + + G +G T++ V L
Sbjct: 169 ENIEKVLEE-IRPYLIGTADGSLDLVEIEDPIVKIRITGPAAG----VMTVRVAVTQKLR 223
Query: 178 HFVPEVKDIRTV 189
+P + ++ +
Sbjct: 224 EKIPSIAAVQLI 235
>gi|123965714|ref|YP_001010795.1| NifU-like protein [Prochlorococcus marinus str. MIT 9515]
gi|123200080|gb|ABM71688.1| NifU-like protein [Prochlorococcus marinus str. MIT 9515]
Length = 81
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + +++VLD +RP + DGG++ IV + ++GAC CPS++ TLK G
Sbjct: 4 ETLPLTNENVEKVLDE-LRPFLISDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDIRTV 189
+ L +PE+ ++ V
Sbjct: 63 IERKLKEMIPEISEVVQV 80
>gi|90655381|gb|ABD96222.1| NifU-like protein [uncultured marine type-A Synechococcus GOM 3M9]
Length = 81
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + + +++VLD +RP + DGG++ IV + ++GAC CPS++ TLK G
Sbjct: 4 ETMALTHENVEKVLDE-LRPFLMADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDIRTV 189
+ + +PEV ++ V
Sbjct: 63 IERKMREAIPEVSEVVQV 80
>gi|56751077|ref|YP_171778.1| putative NifU-like protein [Synechococcus elongatus PCC 6301]
gi|81299261|ref|YP_399469.1| putative NifU-like protein [Synechococcus elongatus PCC 7942]
gi|24414813|emb|CAD55626.1| putative NifU-like protein [Synechococcus elongatus PCC 7942]
gi|56686036|dbj|BAD79258.1| putative NifU-like protein [Synechococcus elongatus PCC 6301]
gi|81168142|gb|ABB56482.1| putative NifU-like protein [Synechococcus elongatus PCC 7942]
Length = 81
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + + ++ VLD +RP + DGG++ IV L + GAC CPS++ TL+ G
Sbjct: 4 ETLALTPENVETVLDE-LRPYLIADGGNVELVELDGPIVKLRLNGACGSCPSSTMTLRMG 62
Query: 172 VANILNHFVPEVKDIRTV 189
+ L +PE+ ++ V
Sbjct: 63 IERKLRESIPEISEVEQV 80
>gi|86608468|ref|YP_477230.1| NifU domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557010|gb|ABD01967.1| NifU domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 80
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ +++VL N +RP + DGG++ +V L ++GAC CPS++ TLK G+ L
Sbjct: 9 TENVEKVL-NELRPYLMADGGNVELVEIDGPVVKLRLQGACGACPSSTMTLKMGIERKLR 67
Query: 178 HFVPEVKDIRTV 189
+P++ ++ V
Sbjct: 68 ESIPDILEVEQV 79
>gi|113461632|ref|YP_719701.1| putative DNA uptake protein [Haemophilus somnus 129PT]
gi|170718659|ref|YP_001783854.1| DNA uptake protein [Haemophilus somnus 2336]
gi|119370610|sp|Q0I5I6|NFUA_HAES1 RecName: Full=Fe/S biogenesis protein nfuA
gi|189041725|sp|B0URV5|NFUA_HAES2 RecName: Full=Fe/S biogenesis protein nfuA
gi|112823675|gb|ABI25764.1| conserved hypothetical protein [Haemophilus somnus 129PT]
gi|168826788|gb|ACA32159.1| HesB/YadR/YfhF-family protein [Haemophilus somnus 2336]
Length = 193
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 10/179 (5%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLR-PPVL 78
+ HF + + RIF + PG + G + + ++
Sbjct: 4 TISEAAQAHFRRLLDQQEEGTNIRIFVVNPGSPNAECGVSYCPKNAVETTDHEIKYSEFS 63
Query: 79 GMIMEH---FISGDPI--IHNGGLGDMKLDDMGSGDFI-ESDSAVVQRIKEVLDNRVRPA 132
I E F+ I I + L + D+ +++R++ + ++ P
Sbjct: 64 AFIDEVSFPFLEDAEIDYITEEMGSQLTLKAPNAKMRKVADDAPLIERVEYAIQTQINPQ 123
Query: 133 VARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRTV 189
+A GG I +DG L G C+GC TLK G+ +L F E+ ++ V
Sbjct: 124 LAGHGGHITLIEITKDGKAILQFGGGCNGCSMVDVTLKDGIEKQLLAMFADELTGVKDV 182
>gi|158334696|ref|YP_001515868.1| NifU domain-containing protein [Acaryochloris marina MBIC11017]
gi|158304937|gb|ABW26554.1| NifU domain protein [Acaryochloris marina MBIC11017]
Length = 80
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++ VLD +RP + DGG++ +V L ++GAC CPS++ TLK G+ L
Sbjct: 10 ENVETVLDE-LRPYLMADGGNVELVEVEGPVVKLRLQGACGSCPSSAMTLKMGIERKLRD 68
Query: 179 FVPEVKDIRTV 189
+PE+ ++ V
Sbjct: 69 TIPEIAEVEQV 79
>gi|167465184|ref|ZP_02330273.1| nitrogen-fixing NifU domain protein [Paenibacillus larvae subsp.
larvae BRL-230010]
gi|322384547|ref|ZP_08058227.1| iron-sulfur scaffold-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321150602|gb|EFX44079.1| iron-sulfur scaffold-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 82
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
DS + + EVLD ++RP + RDGGD+ DGIV L + GAC CPS++ TLK G+
Sbjct: 7 DSTMYDEVLEVLD-KLRPFLQRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIE 65
Query: 174 NILNHFVPEVKDIRTV 189
L V ++++ V
Sbjct: 66 RALVEEVEGIQEVVQV 81
>gi|124360086|gb|ABN08102.1| Nitrogen-fixing NifU, C-terminal [Medicago truncatula]
Length = 242
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ +++VLD VRP + DGG++ +V L ++GAC CPS++ TLK G+ L
Sbjct: 92 TEENVEKVLDE-VRPGLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRL 150
Query: 177 NHFVPEVKDIRTV 189
+PE+ ++ +
Sbjct: 151 RDKIPEILEVEQI 163
Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 100 MKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGAC 158
++ ++ E+ + + E + + +RP + GG + D IV + + G
Sbjct: 155 PEILEVEQILDTETGLELTEDNVESVLSEIRPYLIGTGGGTLELVEINDYIVKVRLSGPA 214
Query: 159 SGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+G T++ + L +P + ++ +
Sbjct: 215 AG----VMTVRVALTQKLRDKIPSIAAVQLI 241
>gi|113954347|ref|YP_729865.1| NifU domain-containing protein [Synechococcus sp. CC9311]
gi|113881698|gb|ABI46656.1| NifU domain protein [Synechococcus sp. CC9311]
Length = 81
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + + +++VLD +RP + DGG++ +V + ++GAC CPS++ TLK G
Sbjct: 4 ETMALTNENVEKVLDE-LRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDIRTV 189
+ + +PEV ++ V
Sbjct: 63 IERKMRESIPEVSEVVQV 80
>gi|238897767|ref|YP_002923446.1| Fe/S biogenesis protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|259511743|sp|C4K405|NFUA_HAMD5 RecName: Full=Fe/S biogenesis protein nfuA
gi|229465524|gb|ACQ67298.1| Fe/S biogenesis protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 191
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 70/180 (38%), Gaps = 15/180 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF ++ R+F PG + G + + HL+ +
Sbjct: 3 TITEAAQNHFVKLLSSQPEGTQIRVFVANPGKPTAECGVSYCPADSVESADTHLKFNLFS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
+ ++ + P ++ + D D++GS + D+ +++R+ VL +++
Sbjct: 63 VFVDPISA--PYLNEAAI-DFVTDELGSQLTLKAPNAKVRKVADDAPLIERVDYVLQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + D L G C+GC TLK G+ L PE+K ++
Sbjct: 120 NPQLANHGGRVTLMEITDDAFAVLQFGGGCNGCSMVDVTLKEGIEKELLQQFPELKGVKD 179
>gi|15923926|ref|NP_371460.1| hypothetical protein SAV0936 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926525|ref|NP_374058.1| hypothetical protein SA0797 [Staphylococcus aureus subsp. aureus
N315]
gi|21282547|ref|NP_645635.1| hypothetical protein MW0818 [Staphylococcus aureus subsp. aureus
MW2]
gi|49483096|ref|YP_040320.1| hypothetical protein SAR0898 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49485712|ref|YP_042933.1| hypothetical protein SAS0806 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|82750551|ref|YP_416292.1| hypothetical protein SAB0802c [Staphylococcus aureus RF122]
gi|87159950|ref|YP_493539.1| hypothetical protein SAUSA300_0839 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88194630|ref|YP_499426.1| hypothetical protein SAOUHSC_00873 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148267370|ref|YP_001246313.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
JH9]
gi|150393423|ref|YP_001316098.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
JH1]
gi|151221019|ref|YP_001331841.1| hypothetical protein NWMN_0807 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156979262|ref|YP_001441521.1| hypothetical protein SAHV_0931 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161509138|ref|YP_001574797.1| hypothetical protein USA300HOU_0897 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221141927|ref|ZP_03566420.1| hypothetical protein SauraJ_09890 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253316824|ref|ZP_04840037.1| hypothetical protein SauraC_11885 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253731543|ref|ZP_04865708.1| NifU family protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253732709|ref|ZP_04866874.1| NifU family protein [Staphylococcus aureus subsp. aureus TCH130]
gi|255005726|ref|ZP_05144327.2| hypothetical protein SauraM_04635 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257424985|ref|ZP_05601412.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427651|ref|ZP_05604050.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257430286|ref|ZP_05606669.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257432983|ref|ZP_05609343.1| nitrogen fixation protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257435887|ref|ZP_05611935.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|257795329|ref|ZP_05644308.1| nitrogen fixation protein NifU [Staphylococcus aureus A9781]
gi|258406978|ref|ZP_05680131.1| nitrogen fixation protein NifU [Staphylococcus aureus A9763]
gi|258421946|ref|ZP_05684867.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|258424377|ref|ZP_05687257.1| nitrogen fixation protein [Staphylococcus aureus A9635]
gi|258435343|ref|ZP_05689082.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258441555|ref|ZP_05690915.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus A8115]
gi|258447254|ref|ZP_05695403.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|258450014|ref|ZP_05698112.1| nitrogen fixation protein NifU [Staphylococcus aureus A6224]
gi|258452112|ref|ZP_05700128.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|258455527|ref|ZP_05703486.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|262049630|ref|ZP_06022498.1| hypothetical protein SAD30_1213 [Staphylococcus aureus D30]
gi|262052935|ref|ZP_06025116.1| hypothetical protein SA930_0147 [Staphylococcus aureus 930918-3]
gi|269202551|ref|YP_003281820.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
ED98]
gi|282893963|ref|ZP_06302194.1| thioredoxin [Staphylococcus aureus A8117]
gi|282903473|ref|ZP_06311364.1| NifU domain protein [Staphylococcus aureus subsp. aureus C160]
gi|282905251|ref|ZP_06313108.1| thioredoxin-family protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908231|ref|ZP_06316062.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282910512|ref|ZP_06318316.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282913708|ref|ZP_06321497.1| NifU domain protein [Staphylococcus aureus subsp. aureus M899]
gi|282916186|ref|ZP_06323948.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus D139]
gi|282918634|ref|ZP_06326371.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus C427]
gi|282922215|ref|ZP_06329910.1| thioredoxin-like protein [Staphylococcus aureus A9765]
gi|282923624|ref|ZP_06331304.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus C101]
gi|282927159|ref|ZP_06334781.1| thioredoxin-like protein [Staphylococcus aureus A10102]
gi|283770001|ref|ZP_06342893.1| thioredoxin protein [Staphylococcus aureus subsp. aureus H19]
gi|283957674|ref|ZP_06375127.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284023863|ref|ZP_06378261.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
132]
gi|293500750|ref|ZP_06666601.1| thioredoxin protein [Staphylococcus aureus subsp. aureus 58-424]
gi|293509700|ref|ZP_06668411.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus M809]
gi|293524288|ref|ZP_06670975.1| NifU domain protein [Staphylococcus aureus subsp. aureus M1015]
gi|294850211|ref|ZP_06790947.1| thioredoxin-like protein [Staphylococcus aureus A9754]
gi|295405741|ref|ZP_06815550.1| thioredoxin-like protein [Staphylococcus aureus A8819]
gi|295427419|ref|ZP_06820054.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275869|ref|ZP_06858376.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
MR1]
gi|297208429|ref|ZP_06924859.1| NifU domain protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297245332|ref|ZP_06929203.1| hypothetical protein SLAG_01427 [Staphylococcus aureus A8796]
gi|297590221|ref|ZP_06948860.1| NifU domain protein [Staphylococcus aureus subsp. aureus MN8]
gi|300912505|ref|ZP_07129948.1| NifU domain protein [Staphylococcus aureus subsp. aureus TCH70]
gi|304381511|ref|ZP_07364161.1| NifU domain protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|13700740|dbj|BAB42036.1| SA0797 [Staphylococcus aureus subsp. aureus N315]
gi|14246705|dbj|BAB57098.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
Mu50]
gi|21203984|dbj|BAB94683.1| MW0818 [Staphylococcus aureus subsp. aureus MW2]
gi|49241225|emb|CAG39904.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49244155|emb|CAG42581.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|82656082|emb|CAI80490.1| nitrogen fixation protein [Staphylococcus aureus RF122]
gi|87125924|gb|ABD20438.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202188|gb|ABD29998.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147740439|gb|ABQ48737.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus JH9]
gi|149945875|gb|ABR51811.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus JH1]
gi|150373819|dbj|BAF67079.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156721397|dbj|BAF77814.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|160367947|gb|ABX28918.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724786|gb|EES93515.1| NifU family protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253729320|gb|EES98049.1| NifU family protein [Staphylococcus aureus subsp. aureus TCH130]
gi|257272555|gb|EEV04678.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275844|gb|EEV07317.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257279063|gb|EEV09674.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257282398|gb|EEV12533.1| nitrogen fixation protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257285078|gb|EEV15197.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|257789301|gb|EEV27641.1| nitrogen fixation protein NifU [Staphylococcus aureus A9781]
gi|257841517|gb|EEV65958.1| nitrogen fixation protein NifU [Staphylococcus aureus A9763]
gi|257842279|gb|EEV66707.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|257845390|gb|EEV69424.1| nitrogen fixation protein [Staphylococcus aureus A9635]
gi|257849004|gb|EEV72987.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257852345|gb|EEV76271.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus A8115]
gi|257854002|gb|EEV76956.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|257856934|gb|EEV79837.1| nitrogen fixation protein NifU [Staphylococcus aureus A6224]
gi|257860327|gb|EEV83159.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|257862345|gb|EEV85114.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|259159186|gb|EEW44249.1| hypothetical protein SA930_0147 [Staphylococcus aureus 930918-3]
gi|259162272|gb|EEW46846.1| hypothetical protein SAD30_1213 [Staphylococcus aureus D30]
gi|262074841|gb|ACY10814.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
ED98]
gi|269940438|emb|CBI48815.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282314492|gb|EFB44882.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus C101]
gi|282317768|gb|EFB48140.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus C427]
gi|282319626|gb|EFB49974.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus D139]
gi|282322740|gb|EFB53062.1| NifU domain protein [Staphylococcus aureus subsp. aureus M899]
gi|282325904|gb|EFB56212.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282327896|gb|EFB58178.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282331658|gb|EFB61170.1| thioredoxin-family protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282590848|gb|EFB95923.1| thioredoxin-like protein [Staphylococcus aureus A10102]
gi|282593505|gb|EFB98499.1| thioredoxin-like protein [Staphylococcus aureus A9765]
gi|282596428|gb|EFC01389.1| NifU domain protein [Staphylococcus aureus subsp. aureus C160]
gi|282763449|gb|EFC03578.1| thioredoxin [Staphylococcus aureus A8117]
gi|283460148|gb|EFC07238.1| thioredoxin protein [Staphylococcus aureus subsp. aureus H19]
gi|283470135|emb|CAQ49346.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
ST398]
gi|283791125|gb|EFC29940.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285816615|gb|ADC37102.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus
04-02981]
gi|290921251|gb|EFD98312.1| NifU domain protein [Staphylococcus aureus subsp. aureus M1015]
gi|291095755|gb|EFE26016.1| thioredoxin protein [Staphylococcus aureus subsp. aureus 58-424]
gi|291467797|gb|EFF10312.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus M809]
gi|294822985|gb|EFG39418.1| thioredoxin-like protein [Staphylococcus aureus A9754]
gi|294969176|gb|EFG45196.1| thioredoxin-like protein [Staphylococcus aureus A8819]
gi|295128807|gb|EFG58438.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296887168|gb|EFH26071.1| NifU domain protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297177635|gb|EFH36885.1| hypothetical protein SLAG_01427 [Staphylococcus aureus A8796]
gi|297576520|gb|EFH95235.1| NifU domain protein [Staphylococcus aureus subsp. aureus MN8]
gi|298694175|gb|ADI97397.1| nitrogen fixation protein [Staphylococcus aureus subsp. aureus
ED133]
gi|300886751|gb|EFK81953.1| NifU domain protein [Staphylococcus aureus subsp. aureus TCH70]
gi|302332549|gb|ADL22742.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302750764|gb|ADL64941.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304339874|gb|EFM05818.1| NifU domain protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312438702|gb|ADQ77773.1| NifU domain protein [Staphylococcus aureus subsp. aureus TCH60]
gi|312829333|emb|CBX34175.1| nifU-like domain protein [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315130484|gb|EFT86471.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|315194468|gb|EFU24860.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|315197289|gb|EFU27627.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|320141247|gb|EFW33094.1| NifU-like domain protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143019|gb|EFW34810.1| NifU-like domain protein [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323440910|gb|EGA98618.1| NifU domain-containing protein [Staphylococcus aureus O11]
gi|323443798|gb|EGB01410.1| NifU domain-containing protein [Staphylococcus aureus O46]
gi|329313603|gb|AEB88016.1| Nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus T0131]
gi|329726251|gb|EGG62721.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21189]
gi|329728166|gb|EGG64605.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21172]
gi|329733972|gb|EGG70294.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21193]
Length = 80
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
D+ + ++ EV++ R+RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 4 EDTTMFDQVAEVIE-RLRPFLLRDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGI 62
Query: 173 ANILNHFVPEVKDIRTV 189
L+ VP V ++ V
Sbjct: 63 ERALHEEVPGVIEVEQV 79
>gi|33239869|ref|NP_874811.1| NifU-like protein [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33237395|gb|AAP99463.1| Thioredoxin family protein [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
Length = 81
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + +++VLD +RP + DGG++ IV + ++GAC CPS++ TLK G+
Sbjct: 5 TMALTHANVEKVLDE-LRPFLMADGGNVEIVEIDGPIVKVRLQGACGSCPSSTMTLKMGI 63
Query: 173 ANILNHFVPEVKDIRTV 189
L +PEV ++ V
Sbjct: 64 ERKLCEMIPEVSEVIQV 80
>gi|159902957|ref|YP_001550301.1| NifU-like protein [Prochlorococcus marinus str. MIT 9211]
gi|159888133|gb|ABX08347.1| NifU-like protein [Prochlorococcus marinus str. MIT 9211]
Length = 81
Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
E+ +++VLD +RP + DGG++ IV + ++GAC CPS++ TLK
Sbjct: 3 QETMPLTKDNVEKVLDE-LRPFLMADGGNVEIVEIDGPIVKVRLQGACGSCPSSTMTLKM 61
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ L +PEV ++ +
Sbjct: 62 GIERKLREMIPEVSEVVQI 80
>gi|189426530|ref|YP_001953707.1| nitrogen-fixing NifU domain protein [Geobacter lovleyi SZ]
gi|189422789|gb|ACD97187.1| nitrogen-fixing NifU domain protein [Geobacter lovleyi SZ]
Length = 74
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANI 175
++++++ VLD +VRP + RDGGD+ DGIV + ++GAC CP ++ TLK G+
Sbjct: 1 MIEKVQAVLD-QVRPMLQRDGGDVELIEVTADGIVKVKLQGACGSCPMSTMTLKMGIEKA 59
Query: 176 LNHFVPEVKDIRTV 189
+ +PE+ +++ V
Sbjct: 60 IKEQIPEIVEVQQV 73
>gi|282875569|ref|ZP_06284440.1| NifU-like protein [Staphylococcus epidermidis SK135]
gi|281295596|gb|EFA88119.1| NifU-like protein [Staphylococcus epidermidis SK135]
Length = 80
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+S + ++ EV++ R+RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 4 ENSTMFDQVAEVIE-RLRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGI 62
Query: 173 ANILNHFVPEVKDIRTV 189
L+ VP V ++ V
Sbjct: 63 ERALHEEVPGVIEVEQV 79
>gi|294941309|ref|XP_002783074.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
gi|239895342|gb|EER14870.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
Length = 165
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 69/119 (57%), Gaps = 7/119 (5%)
Query: 73 LRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPA 132
L+P V +I + F I + + ++ G +D VV+ I E+L+ R++P
Sbjct: 2 LKPNVELVISQFFD----IPNVKPVAPDSIEYTQEGQDQHNDD-VVKSIHEILEQRIKPF 56
Query: 133 VARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
V RDGGD+ F + G++ + + G+C+GCP +S TLK+G+ ++ H++PEVK++ +
Sbjct: 57 VERDGGDVEFIAFDSDTGVLQIRLVGSCAGCPKSSVTLKFGIQRMVCHYIPEVKNVINI 115
>gi|254507293|ref|ZP_05119429.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus 16]
gi|219549753|gb|EED26742.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus 16]
Length = 195
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 69/181 (38%), Gaps = 16/181 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+N + R+F + PG + G + + L
Sbjct: 6 TITENAQSHFANLLSQQPEGTNIRVFVVNPGTQNAECGVSYCPPEAVESTDTELAYEHFS 65
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D MGS + D+ +V+R++ V+ +V
Sbjct: 66 AFVDELS--LPFLEDAEI-DFVTDKMGSQLTLKAPNAKMRKVSDDAPLVERVEYVIQTQV 122
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIR 187
P +A GG + +GI ++ G C+GC TLK G+ +L F E+ +R
Sbjct: 123 NPQLAGHGGHVNLVEITEEGIAIVAFGGGCNGCSMVDVTLKEGIEKELLQQFEGELTAVR 182
Query: 188 T 188
Sbjct: 183 D 183
>gi|148238937|ref|YP_001224324.1| NifU-like protein [Synechococcus sp. WH 7803]
gi|147847476|emb|CAK23027.1| NifU-like protein [Synechococcus sp. WH 7803]
Length = 81
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + +++VLD +RP + DGG++ +V + ++GAC CPS++ TLK G
Sbjct: 4 ETMPLTSENVEKVLDE-LRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDIRTV 189
+ + +PEV ++ V
Sbjct: 63 IERKMREAIPEVSEVVQV 80
>gi|90412702|ref|ZP_01220703.1| hypothetical protein P3TCK_22380 [Photobacterium profundum 3TCK]
gi|90326277|gb|EAS42696.1| hypothetical protein P3TCK_22380 [Photobacterium profundum 3TCK]
Length = 192
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 67/182 (36%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F + PG + G + + + +
Sbjct: 3 TITESAQQHFGKLLAQQPEGTNIRVFVVNPGTQNAECGVSYCPPEAVEASDTKIELELFD 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D MGS + D+ +++R+ + +V
Sbjct: 63 AYLDELS--LPFLDDAEI-DFVTDKMGSQLTLKAPNAKVRKVSDDATLMERVDYAIQTQV 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIR 187
P +A GG++ DG+ L G C+GC TLK G+ +L F E+ +R
Sbjct: 120 NPQLAGHGGNVSLAEITEDGVAILQFGGGCNGCSMVDVTLKEGIEKELLAQFAGELTGVR 179
Query: 188 TV 189
+
Sbjct: 180 DI 181
>gi|70727016|ref|YP_253930.1| nitrogen fixation protein NifU [Staphylococcus haemolyticus
JCSC1435]
gi|223043066|ref|ZP_03613114.1| nitrogen fixation protein NifU [Staphylococcus capitis SK14]
gi|228474235|ref|ZP_04058970.1| nitrogen fixation protein NifU [Staphylococcus hominis SK119]
gi|239636541|ref|ZP_04677543.1| nitrogen fixation protein NifU [Staphylococcus warneri L37603]
gi|242373103|ref|ZP_04818677.1| nitrogen fixation protein NifU [Staphylococcus epidermidis
M23864:W1]
gi|289551248|ref|YP_003472152.1| nitrogen-fixing NifU domain protein [Staphylococcus lugdunensis
HKU09-01]
gi|314933148|ref|ZP_07840513.1| NifU domain protein [Staphylococcus caprae C87]
gi|314936844|ref|ZP_07844191.1| NifU domain protein [Staphylococcus hominis subsp. hominis C80]
gi|315658750|ref|ZP_07911619.1| NifU domain protein [Staphylococcus lugdunensis M23590]
gi|68447740|dbj|BAE05324.1| nitrogen fixation protein NifU [Staphylococcus haemolyticus
JCSC1435]
gi|222443920|gb|EEE50017.1| nitrogen fixation protein NifU [Staphylococcus capitis SK14]
gi|228271594|gb|EEK12941.1| nitrogen fixation protein NifU [Staphylococcus hominis SK119]
gi|239597896|gb|EEQ80391.1| nitrogen fixation protein NifU [Staphylococcus warneri L37603]
gi|242349257|gb|EES40858.1| nitrogen fixation protein NifU [Staphylococcus epidermidis
M23864:W1]
gi|289180780|gb|ADC88025.1| nitrogen-fixing NifU domain protein [Staphylococcus lugdunensis
HKU09-01]
gi|313653298|gb|EFS17055.1| NifU domain protein [Staphylococcus caprae C87]
gi|313655463|gb|EFS19208.1| NifU domain protein [Staphylococcus hominis subsp. hominis C80]
gi|315496205|gb|EFU84531.1| NifU domain protein [Staphylococcus lugdunensis M23590]
gi|330684919|gb|EGG96601.1| NifU-like protein [Staphylococcus epidermidis VCU121]
Length = 80
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ + ++ EV++ R+RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 4 ENATMFDQVAEVIE-RLRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGI 62
Query: 173 ANILNHFVPEVKDIRTV 189
L+ VP V ++ V
Sbjct: 63 ERALHEEVPGVIEVEQV 79
>gi|297583473|ref|YP_003699253.1| nitrogen-fixing NifU domain-containing protein [Bacillus
selenitireducens MLS10]
gi|297141930|gb|ADH98687.1| nitrogen-fixing NifU domain protein [Bacillus selenitireducens
MLS10]
Length = 78
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + +++EVLD ++RP + RDGGD+ DG+V + + GAC CPS++ TLK G+
Sbjct: 2 TTETMESQVQEVLD-KLRPFLLRDGGDVELVDVEDGVVKVRLMGACGSCPSSTITLKAGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
L VP V ++ V
Sbjct: 61 ERALLEEVPGVTELEQV 77
>gi|255083372|ref|XP_002504672.1| predicted protein [Micromonas sp. RCC299]
gi|226519940|gb|ACO65930.1| predicted protein [Micromonas sp. RCC299]
Length = 192
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 104 DMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPS 163
G E +++VLD VRP + DGGD+ +V L + GAC CPS
Sbjct: 29 AAGESSISEKLELTADNVEKVLDE-VRPYLIADGGDVELVEIDGLVVRLKLNGACGSCPS 87
Query: 164 ASETLKYGVANILNHFVPEVKDIRTV 189
++ T++ G+ L +PE+ ++ +
Sbjct: 88 STVTMRMGIEKRLMEKIPEIMEVEQI 113
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
+ ++ LD +RP +A GG + D IV + + G ++ T++ V
Sbjct: 121 DLTEENVEATLDE-IRPYLAGTGGGQLELVDIEDPIVKVRLTGP----AASVMTVRVAVT 175
Query: 174 NILNHFVPEVKDIR 187
L +P + ++
Sbjct: 176 QKLREKMPSIAAVQ 189
>gi|116073290|ref|ZP_01470552.1| NifU-like protein [Synechococcus sp. RS9916]
gi|116068595|gb|EAU74347.1| NifU-like protein [Synechococcus sp. RS9916]
Length = 81
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + +++VLD +RP + DGG++ +V + ++GAC CPS++ TLK G
Sbjct: 4 ETLPLTSENVEKVLDE-LRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDIRTV 189
+ + +PEV ++ V
Sbjct: 63 IERKMREAIPEVSEVVQV 80
>gi|294897644|ref|XP_002776034.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
gi|239882510|gb|EER07850.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
Length = 154
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
Query: 48 IPGIASVYFGYDFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMG 106
I G+ V + + V K DW ++P V ++ F P + + ++ +
Sbjct: 1 IEGVERVVLTHHNVAVSKVSSIDWCFVKPKVESVLSNFFA--VPGLQSVYRYALQFETEV 58
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSA 164
+ +++RI EVLD+R+RP + DGGD+ + + G++ + ++GAC+GCP +
Sbjct: 59 EE---AEKAKLMERIAEVLDDRIRPVLQDDGGDVDVADFDEETGVLSVRLKGACAGCPMS 115
Query: 165 SETLKYGVANILNHFVPEVKDIRTV 189
S TL++ + N+L VPEVK + +
Sbjct: 116 SVTLRFRIENMLVQSVPEVKKVINI 140
>gi|258514732|ref|YP_003190954.1| nitrogen-fixing NifU domain-containing protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257778437|gb|ACV62331.1| nitrogen-fixing NifU domain protein [Desulfotomaculum acetoxidans
DSM 771]
Length = 73
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +++KEVL +VRP + RDGGD+ DGIV + ++GACSGCP A TLK G+ +
Sbjct: 1 MHEKVKEVL-GKVRPYLQRDGGDVELVDITADGIVRVKLKGACSGCPGALITLKQGIERV 59
Query: 176 LNHFVPEVKDIRT 188
L +PEVK +
Sbjct: 60 LKQEIPEVKGVEQ 72
>gi|294901264|ref|XP_002777311.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
gi|239884853|gb|EER09127.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
Length = 299
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 11/163 (6%)
Query: 32 NAKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPI 91
+ + +A + + G+ V G F+++ + E + I
Sbjct: 23 TTESSFCPRVAKELLEVKGVDKVTVGDGFLSIIASRPSGRE-----FAFAEEQLAAFKSI 77
Query: 92 IHNGGLGDMK----LDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR- 146
+ + + S + V +RI+ +LD RVRP +A+DGGD F +
Sbjct: 78 LDKAAVEPENYLSGDSTVTERAPSSSSNEVEERIQSLLDTRVRPVIAQDGGDCEFISFDS 137
Query: 147 -DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
G V L++ G+C GCP + +TLK + L +V EV +
Sbjct: 138 QTGRVTLALHGSCEGCPQSVKTLKDSIERTLKFYVEEVSSVEQ 180
>gi|109900531|ref|YP_663786.1| putative DNA uptake protein [Pseudoalteromonas atlantica T6c]
gi|119370611|sp|Q15N06|NFUA_PSEA6 RecName: Full=Fe/S biogenesis protein nfuA
gi|109702812|gb|ABG42732.1| HesB/YadR/YfhF [Pseudoalteromonas atlantica T6c]
Length = 192
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 59/179 (32%), Gaps = 14/179 (7%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF E + R+F + PG S G + D + G
Sbjct: 4 ISDTAQAHFCKLLEKQEPDTNIRVFVVNPGTPSAECGVSYCPP--DAVESTDTTLEFNGF 61
Query: 81 IMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVRP 131
P + + + ++ D+ + +RI +++ + P
Sbjct: 62 DAVVDAESAPFLSEAEIDFVTDQMGSQLTLKAPNAKARKVDDDAPLEERINYMIEAEINP 121
Query: 132 AVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
+A GG ++ G L G C+GC TLK G+ +L F E+ ++
Sbjct: 122 QLASHGGKVMLMEITEKGEAILQFGGGCNGCSMVDVTLKDGIEKQMLAQFSGELTAVKD 180
>gi|269103899|ref|ZP_06156596.1| hypothetical protein VDA_003326 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163797|gb|EEZ42293.1| hypothetical protein VDA_003326 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 192
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/182 (20%), Positives = 69/182 (37%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F + PG + G + + + ++ +
Sbjct: 3 TISASAQEHFGKLLAQQPEGTNIRVFVVNPGTPNAECGVSYCPPEAVEANDTEIKFDLFS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D MGS + D+ +++R+ V+ +V
Sbjct: 63 AFVDELS--LPFLTDAQI-DFVTDKMGSQLTLKAPNAKVRKVADDAPLMERVDYVIQTQV 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIR 187
P +A GG I DGI + G C+GC TLK G+ +L F E+ +R
Sbjct: 120 NPQLAGHGGHISLIEITEDGIAVIQFGGGCNGCSMVDVTLKEGIEKELLAQFEGELNAVR 179
Query: 188 TV 189
V
Sbjct: 180 DV 181
>gi|258405531|ref|YP_003198273.1| nitrogen-fixing NifU domain-containing protein [Desulfohalobium
retbaense DSM 5692]
gi|257797758|gb|ACV68695.1| nitrogen-fixing NifU domain protein [Desulfohalobium retbaense DSM
5692]
Length = 73
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ ++I+ LD +VRP + DGGDI + IV + ++GAC GCP + TLK GV +
Sbjct: 1 MREKIEAALD-KVRPVLQADGGDIELVEITDNNIVRVRLQGACKGCPMSQMTLKNGVERV 59
Query: 176 LNHFVPEVKDIRTV 189
L VPE+K + +V
Sbjct: 60 LLKEVPEIKGVESV 73
>gi|298492022|ref|YP_003722199.1| nitrogen-fixing NifU domain-containing protein ['Nostoc azollae'
0708]
gi|298233940|gb|ADI65076.1| nitrogen-fixing NifU domain protein ['Nostoc azollae' 0708]
Length = 79
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
+ + ++ ++ VLD +RP + DGG++ IV L ++GAC CPS++ TL+
Sbjct: 1 MSTMELTLENVETVLDE-MRPYLMSDGGNVEVVELDGPIVKLRLQGACGSCPSSAMTLRM 59
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ L +PE+ +I V
Sbjct: 60 GIERRLKELIPEIAEIEQV 78
>gi|226503511|ref|NP_001150793.1| NFU3 [Zea mays]
gi|195641898|gb|ACG40417.1| NFU3 [Zea mays]
Length = 213
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ +++VLD VRP++ DGG++ +V L ++GAC CPS++ TLK G+ L
Sbjct: 63 TEENVEKVLDE-VRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRL 121
Query: 177 NHFVPEVKDIRTV 189
+P++ ++ +
Sbjct: 122 RDKIPDILEVEQI 134
Score = 40.2 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 8/75 (10%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSAS-ETLKYGV 172
+ +VLD +RP ++ GG + +V + + G P+A T++ V
Sbjct: 142 DLTADNVDKVLDE-IRPYLSGTGGGSLELLQIDGYVVKIRIGG-----PAAGVMTVRVAV 195
Query: 173 ANILNHFVPEVKDIR 187
L +P + ++
Sbjct: 196 TQKLREKIPSILAVQ 210
>gi|33860975|ref|NP_892536.1| NifU-like protein [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33639707|emb|CAE18877.1| NifU-like protein [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 81
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + ++ VLD +RP + DGG++ IV + ++GAC CPS++ TLK G
Sbjct: 4 ETLPLTNENVETVLDE-LRPFLISDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDIRTV 189
+ L +PE+ ++ V
Sbjct: 63 IERKLKEMIPEISEVVQV 80
>gi|28896920|ref|NP_796525.1| putative DNA uptake protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153837871|ref|ZP_01990538.1| thioredoxin [Vibrio parahaemolyticus AQ3810]
gi|260365893|ref|ZP_05778387.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus K5030]
gi|260877820|ref|ZP_05890175.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus AN-5034]
gi|260895531|ref|ZP_05904027.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus Peru-466]
gi|260902555|ref|ZP_05910950.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus AQ4037]
gi|51702006|sp|Q87TC4|NFUA_VIBPA RecName: Full=Fe/S biogenesis protein nfuA
gi|28805128|dbj|BAC58409.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149748734|gb|EDM59579.1| thioredoxin [Vibrio parahaemolyticus AQ3810]
gi|308088597|gb|EFO38292.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus Peru-466]
gi|308089948|gb|EFO39643.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus AN-5034]
gi|308109708|gb|EFO47248.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus AQ4037]
gi|308113467|gb|EFO51007.1| IscR-regulated protein YhgI [Vibrio parahaemolyticus K5030]
gi|328471695|gb|EGF42572.1| Fe/S biogenesis protein NfuA [Vibrio parahaemolyticus 10329]
Length = 194
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 71/185 (38%), Gaps = 16/185 (8%)
Query: 17 IPGQVVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRP 75
+ + HF+N + RIF + PG + G + + +
Sbjct: 1 MSNITITETAQTHFANLLGQQPEGTNIRIFVVNPGTQNAECGVSYCPPEAVEATDTEIPY 60
Query: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVL 125
++ P + + + D D MGS + D+ +V+R++ V+
Sbjct: 61 AGFSAYVDELS--LPFLEDAEI-DFVTDKMGSQLTLKAPNAKMRKVSDDAPLVERVEYVI 117
Query: 126 DNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEV 183
+V P +A GG + G+ ++ G C+GC TLK G+ +LN FV E+
Sbjct: 118 QTQVNPQLAGHGGHVNLVEITEAGVAIVAFGGGCNGCSMVDVTLKEGIEKELLNQFVGEL 177
Query: 184 KDIRT 188
+R
Sbjct: 178 TAVRD 182
>gi|163802249|ref|ZP_02196144.1| hypothetical protein 1103602000603_AND4_17694 [Vibrio sp. AND4]
gi|159174054|gb|EDP58864.1| hypothetical protein AND4_17694 [Vibrio sp. AND4]
Length = 194
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 72/185 (38%), Gaps = 16/185 (8%)
Query: 17 IPGQVVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRP 75
+ + HF+N + RIF + PG + G + + +
Sbjct: 1 MSNITITETAQTHFANLLGQQPEGTNIRIFVVNPGTQNAECGVSYCPPEAIESTDTEIPY 60
Query: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVL 125
++ P + + + D D MGS + D+ +V+R++ V+
Sbjct: 61 SGFSAYVDELS--LPFLADAEI-DFVTDKMGSQLTLKAPNAKMRKVADDAPLVERVEYVI 117
Query: 126 DNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEV 183
+V P +A GG + DGI ++ G C+GC TLK G+ +LN F+ E+
Sbjct: 118 QTQVNPQLAGHGGHVNLVEITDDGIAIVAFGGGCNGCSMVDVTLKEGIEKELLNQFIGEL 177
Query: 184 KDIRT 188
+R
Sbjct: 178 TAVRD 182
>gi|149036648|gb|EDL91266.1| histone cell cycle regulation defective interacting protein 5
(predicted), isoform CRA_b [Rattus norvegicus]
Length = 79
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 44/60 (73%)
Query: 130 RPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
RP V DGGD++++G+ DGIV L ++G+C+ CPS+ TLK G+ N+L ++PEV+ + V
Sbjct: 6 RPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPEVEGVEQV 65
>gi|269959406|ref|ZP_06173789.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835843|gb|EEZ89919.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 194
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 67/182 (36%), Gaps = 10/182 (5%)
Query: 17 IPGQVVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRP 75
+ + HF+N + R+F + PG + G + + +
Sbjct: 1 MSNITITETAQTHFANLLGQQPEGTNIRVFVVNPGTQNAECGVSYCPPEAVEGTDTEIPY 60
Query: 76 P-VLGMIME----HFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNR 128
I E + +G + + D+ +V+R++ V+ +
Sbjct: 61 SGFSAFIDELSLPFLEDAEIDFVTDKMGSQLTLKAPNAKMRKVADDAPLVERVEYVIQTQ 120
Query: 129 VRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDI 186
V P +A GG + DGI ++ G C+GC TLK G+ +LN FV E+ +
Sbjct: 121 VNPQLAGHGGHVNLVEITDDGIAIVAFGGGCNGCSMVDVTLKEGIEKELLNQFVGELTAV 180
Query: 187 RT 188
R
Sbjct: 181 RD 182
>gi|260913511|ref|ZP_05919989.1| Fe/S-biogenesis protein NfuA [Pasteurella dagmatis ATCC 43325]
gi|260632451|gb|EEX50624.1| Fe/S-biogenesis protein NfuA [Pasteurella dagmatis ATCC 43325]
Length = 194
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 14/181 (7%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + + RIF + PG + G + + ++
Sbjct: 5 KISEAAQAHFRRLLDQQEEGTNIRIFVVNPGSPNAECGVSYCPANAVEATDTEMKYATFS 64
Query: 80 MIMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVR 130
++ P + + + + + + D+ +++R++ V+ ++
Sbjct: 65 AFVDEIS--LPFLEDAEIDYVTEELGAQLTLKAPNAKMRKVADDAPLIERVEYVIQTQIN 122
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRT 188
P +A GG I +G L G C+GC TLK G+ L P E+K +
Sbjct: 123 PQLASHGGKITLIEITNEGYAILQFGGGCNGCSMVDVTLKDGIEKQLLSLFPNELKGAKD 182
Query: 189 V 189
V
Sbjct: 183 V 183
>gi|194476553|ref|YP_002048732.1| NifU-like protein [Paulinella chromatophora]
gi|171191560|gb|ACB42522.1| NifU-like protein [Paulinella chromatophora]
Length = 81
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + ++ ++ VL N +RP + DGG++ +V + ++GAC CPS++ TLK G
Sbjct: 4 ENLALTLENVETVL-NELRPFLIADGGNVEVAEIDGPVVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDIRTV 189
+ L +PEV ++ V
Sbjct: 63 IERKLREAIPEVSEVIQV 80
>gi|153833894|ref|ZP_01986561.1| thioredoxin [Vibrio harveyi HY01]
gi|156972936|ref|YP_001443843.1| putative DNA uptake protein [Vibrio harveyi ATCC BAA-1116]
gi|166990532|sp|A7MST1|NFUA_VIBHB RecName: Full=Fe/S biogenesis protein nfuA
gi|148869732|gb|EDL68709.1| thioredoxin [Vibrio harveyi HY01]
gi|156524530|gb|ABU69616.1| hypothetical protein VIBHAR_00614 [Vibrio harveyi ATCC BAA-1116]
Length = 194
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 67/182 (36%), Gaps = 10/182 (5%)
Query: 17 IPGQVVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRP 75
+ + HF+N + R+F + PG + G + + +
Sbjct: 1 MSNITITETAQTHFANLLGQQPEGTNIRVFVVNPGTQNAECGVSYCPPEAVEGTDTEIPY 60
Query: 76 P-VLGMIME----HFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNR 128
I E + +G + + D+ +V+R++ V+ +
Sbjct: 61 SGFSAFIDELSLPFLEDAEIDFVTDKMGSQLTLKAPNAKMRKVSDDAPLVERVEYVIQTQ 120
Query: 129 VRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDI 186
V P +A GG + DGI ++ G C+GC TLK G+ +LN FV E+ +
Sbjct: 121 VNPQLAGHGGHVNLVEITDDGIAIVAFGGGCNGCSMVDVTLKEGIEKELLNQFVGELTAV 180
Query: 187 RT 188
R
Sbjct: 181 RD 182
>gi|51701987|sp|Q7MPY4|NFUA_VIBVY RecName: Full=Fe/S biogenesis protein nfuA
gi|51702011|sp|Q8DDU2|NFUA_VIBVU RecName: Full=Fe/S biogenesis protein nfuA
Length = 194
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 69/185 (37%), Gaps = 16/185 (8%)
Query: 17 IPGQVVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRP 75
+ + HF+N + R+F + PG + G + + +
Sbjct: 1 MSNITITEAAQTHFANLLGQQPDGTNIRVFVVNPGTQNAECGVSYCPPEAVEATDTEIPY 60
Query: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVL 125
++ P + + + D D MGS + D+ +++R++ +
Sbjct: 61 QSFSAYVDELS--LPFLEDAEI-DYVTDKMGSQLTLKAPNAKMRKVADDAPLLERVEYAI 117
Query: 126 DNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEV 183
+V P +A GG + D G+ ++ G C+GC TLK G+ +L F E+
Sbjct: 118 QTQVNPQLAGHGGHVKLMEITDAGVAIVAFGGGCNGCSMVDVTLKEGIEKELLQQFSGEL 177
Query: 184 KDIRT 188
+R
Sbjct: 178 TAVRD 182
>gi|145630391|ref|ZP_01786172.1| predicted gluconate transport-associated protein [Haemophilus
influenzae R3021]
gi|260582302|ref|ZP_05850095.1| Fe/S biogenesis protein nfuA [Haemophilus influenzae NT127]
gi|144984126|gb|EDJ91563.1| predicted gluconate transport-associated protein [Haemophilus
influenzae R3021]
gi|260094670|gb|EEW78565.1| Fe/S biogenesis protein nfuA [Haemophilus influenzae NT127]
Length = 198
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 62/178 (34%), Gaps = 10/178 (5%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG- 79
+ HF + + RIF + PG + G + + ++
Sbjct: 10 ISDAAQAHFRKLLDTQEEGTNIRIFVVNPGTPNAECGVSYCPPNAVEESDIEMKYNTFSA 69
Query: 80 MIME----HFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNRVRPAV 133
I E + LG + + D+ +++R++ V+ ++ P +
Sbjct: 70 FIDEVSLPFLEEAEIDYVTEELGAQLTLKAPNAKMRKVADDAPLIERVEYVIQTQINPQL 129
Query: 134 ARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRTV 189
A GG I DG L G C+GC TLK GV L P E+K + V
Sbjct: 130 ANHGGRITLIEITEDGYAVLQFGGGCNGCSMVDVTLKDGVEKQLVSLFPNELKGAKDV 187
>gi|82548259|gb|ABB82950.1| uncharacterized protein with NifU-like and HesB-like domains
[uncultured organism HF70_19B12]
Length = 187
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 8/166 (4%)
Query: 28 IHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
+H+S+ E S LA RI I G F YD + + + V G + +
Sbjct: 13 LHYSSQAEEGDS-LALRI-EIVGRGPKGFQYDLQFIDISDASADDVAQEVRGFQVRIAMR 70
Query: 88 GDPIIHNGGLGDMKLDDMGSGDFIESD-----SAVVQRIKEVLDNRVRPAVARDGGDIVF 142
+ L D K MG G E+ + QR+ EV+D V PAVA GG +
Sbjct: 71 SAKYLEGATL-DFKETLMGGGFSFENPNPLWIDDLSQRVAEVIDKNVNPAVASHGGHVDL 129
Query: 143 KGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
G ++ G C GC A TLK GV ++ VPE+ ++
Sbjct: 130 VGVDANKAIIAFGGGCQGCGMADVTLKQGVEVMIMDNVPEIIEVID 175
>gi|59713068|ref|YP_205844.1| putative DNA uptake protein [Vibrio fischeri ES114]
gi|197336442|ref|YP_002157246.1| IscR-regulated protein YhgI [Vibrio fischeri MJ11]
gi|75353229|sp|Q5E1Z0|NFUA_VIBF1 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767334|sp|B5FCD0|NFUA_VIBFM RecName: Full=Fe/S biogenesis protein nfuA
gi|59481169|gb|AAW86956.1| predicted gluconate transport associated protein [Vibrio fischeri
ES114]
gi|197317932|gb|ACH67379.1| IscR-regulated protein YhgI [Vibrio fischeri MJ11]
Length = 194
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 68/180 (37%), Gaps = 16/180 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ + R+F + PG + G + + + L+ L
Sbjct: 6 ITESAQEHFAKLLAQQPEGTNIRVFVVNPGTQNAECGVSYCPPEAVEANDTELKFEKLSA 65
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
++ P + + + D D MGS + D+ + +R++ + +V
Sbjct: 66 YVDELS--LPFLEDADI-DYVTDKMGSQLTLKAPNAKMRKVADDAPLFERVEYAIQTQVN 122
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
P +A GG + +G+ + G C+GC TLK G+ +L F E+ ++
Sbjct: 123 PQLAGHGGHVSLMEINDEGVAIVQFGGGCNGCSMVDVTLKEGIEKELLVQFEGELTAVKD 182
>gi|117620229|ref|YP_854827.1| putative DNA uptake protein [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|150383443|sp|A0KF09|NFUA_AERHH RecName: Full=Fe/S biogenesis protein nfuA
gi|117561636|gb|ABK38584.1| protein GntY [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 192
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 63/177 (35%), Gaps = 10/177 (5%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF E + R+F + PG + G + + +HL
Sbjct: 4 ISDTAQAHFRKLLEKQPDGTNIRVFVVNPGTQNAECGVSYCPPDAVDPEDQHLPFSGFDC 63
Query: 81 IMEHFIS------GDPIIHNGGLGDMKLDDMGSGDFI-ESDSAVVQRIKEVLDNRVRPAV 133
+++ + + + + L + D+ ++ RI+ VL + V P +
Sbjct: 64 LVDPLSAPFLVDATIDFVTDQMGSQLTLKAPNAKMRKVADDAPLIDRIEYVLMSEVNPML 123
Query: 134 ARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRT 188
A GG + D + L G C+GC TLK G+ L P E+ ++
Sbjct: 124 AGHGGKVTLVELTEDKLAILQFGGGCNGCSMVDYTLKEGIEKQLLEKFPGELNGVKD 180
>gi|260436644|ref|ZP_05790614.1| NifU domain protein [Synechococcus sp. WH 8109]
gi|260414518|gb|EEX07814.1| NifU domain protein [Synechococcus sp. WH 8109]
Length = 76
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ ++ +++VLD +RP + DGG++ IV + ++GAC CPS++ TLK G+
Sbjct: 2 ALTLENVEKVLDE-LRPFLMADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLKMGIER 60
Query: 175 ILNHFVPEVKDIRTV 189
+ +PEV ++ V
Sbjct: 61 KMRESIPEVSEVVQV 75
>gi|261250552|ref|ZP_05943127.1| hypothetical protein VIA_000571 [Vibrio orientalis CIP 102891]
gi|260939121|gb|EEX95108.1| hypothetical protein VIA_000571 [Vibrio orientalis CIP 102891]
Length = 195
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 10/178 (5%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPP-VL 78
+ HF+N + R+F + PG + G + + L+
Sbjct: 6 TITENAQSHFANLLGQQPEGTNIRVFVVNPGTQNAECGVSYCPTEAVESTDTELKFEGFS 65
Query: 79 GMIME----HFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNRVRPA 132
I E + +G + + D+ +V+R++ V+ +V P
Sbjct: 66 AFIDELSLPFLEDAEIDFVTDKMGSQLTLKAPNAKMRKVSDDAPLVERVEYVIQTQVNPQ 125
Query: 133 VARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
+A GG + G+ ++ G C+GC TLK G+ +L F E+ +R
Sbjct: 126 LAGHGGHVNLVEITEQGVAIVAFGGGCNGCSMVDVTLKEGIEKELLQQFEGELSAVRD 183
>gi|152977980|ref|YP_001343609.1| putative DNA uptake protein [Actinobacillus succinogenes 130Z]
gi|171472933|sp|A6VL27|NFUA_ACTSZ RecName: Full=Fe/S biogenesis protein nfuA
gi|150839703|gb|ABR73674.1| HesB/YadR/YfhF-family protein [Actinobacillus succinogenes 130Z]
Length = 194
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 62/179 (34%), Gaps = 10/179 (5%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPP-VL 78
+ HF E++ RIF + PG + G + + + L+
Sbjct: 5 KISDAAQAHFRKLLESQEEGTNIRIFVVNPGTPNAECGVSYCPPSNVEENDSELKFNGFS 64
Query: 79 GMIME----HFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNRVRPA 132
I + + LG + + D+ +++R+ V+ ++ P
Sbjct: 65 AFIDDISYPFLEDAEIDYVTEELGTQLTLKAPNAKMRKVADDAPLIERVDYVIQTQINPQ 124
Query: 133 VARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFV-PEVKDIRTV 189
+A GG I DG L G C+GC TLK GV L E+K + +
Sbjct: 125 LASHGGRITLIEITDDGYAVLQFGGGCNGCSMVDVTLKDGVEKQLVEMFNGELKGAKDI 183
>gi|163784585|ref|ZP_02179431.1| nifU-like domain protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159880146|gb|EDP73804.1| nifU-like domain protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 89
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 110 FIESDSAVVQR--IKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASE 166
E++ A + R ++EVL+ ++RPA+ DGGD+ DG V++ + GACSGC +
Sbjct: 1 MAENNQATIDRAKVEEVLE-KIRPALRFDGGDVELVDIGEDGTVYVRLMGACSGCAMSLM 59
Query: 167 TLKYGVANILNHFVPEVKDIRTV 189
TLK G+ L +PEVK++ V
Sbjct: 60 TLKGGIEQRLKQEIPEVKEVVAV 82
>gi|88809237|ref|ZP_01124746.1| NifU-like protein [Synechococcus sp. WH 7805]
gi|88787179|gb|EAR18337.1| NifU-like protein [Synechococcus sp. WH 7805]
Length = 81
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + +++VLD +RP + DGG++ +V + ++GAC CPS++ TLK G
Sbjct: 4 ETLPLTSENVEKVLDE-LRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMG 62
Query: 172 VANILNHFVPEVKDIRTV 189
+ + +PEV ++ V
Sbjct: 63 IERKMRETIPEVSEVVQV 80
>gi|330827871|ref|YP_004390823.1| Fe/S biogenesis protein nfuA [Aeromonas veronii B565]
gi|328803007|gb|AEB48206.1| Fe/S biogenesis protein nfuA [Aeromonas veronii B565]
Length = 192
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 67/180 (37%), Gaps = 16/180 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF E + R+F + PG + G + + +HL P G
Sbjct: 4 ISDAAQAHFRKLLEKQPDGTNIRVFVVNPGTQNAECGVSYCPPDAVDPEDQHL--PFSGF 61
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
P + + + D D MGS + D+ +++RI+ VL + V
Sbjct: 62 DCMVDPLSAPFLVDATI-DFVTDQMGSQLTLKAPNAKMRKVADDAPLIERIEYVLMSEVN 120
Query: 131 PAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRT 188
P +A GG + D + L G C+GC TLK G+ L P E+ ++
Sbjct: 121 PMLAGHGGKVTLVELTEDKLAILQFGGGCNGCSMVDYTLKEGIEKQLLEKFPGELNGVKD 180
>gi|77361763|ref|YP_341338.1| putative DNA uptake protein [Pseudoalteromonas haloplanktis TAC125]
gi|119370612|sp|Q3IJQ5|NFUA_PSEHT RecName: Full=Fe/S biogenesis protein nfuA
gi|76876674|emb|CAI87896.1| conserved protein of unknown function [Pseudoalteromonas
haloplanktis TAC125]
Length = 191
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 13/179 (7%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ + R+F + PG + G + +D + +R G
Sbjct: 4 ISETAQAHFAKLLADQAQQTNIRVFVVNPGTSQAECGVSYCP--EDAVEDSDIRLNFNGF 61
Query: 81 IMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVRP 131
P + + + + I D+++ +R++ +L+ V P
Sbjct: 62 DGVVDAESAPFLEDAEIDFVTDKMGTQLTLKAPNAKARKISGDASLNERVQHMLETEVNP 121
Query: 132 AVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+A GG + GI L G C+GC TLK G+ + E+ + +
Sbjct: 122 QLANHGGQVSLVEITAAGIAVLQFGGGCNGCSMIDVTLKEGIEKEMIEKFEEITGVADI 180
>gi|328953813|ref|YP_004371147.1| nitrogen-fixing NifU domain-containing protein [Desulfobacca
acetoxidans DSM 11109]
gi|328454137|gb|AEB09966.1| nitrogen-fixing NifU domain-containing protein [Desulfobacca
acetoxidans DSM 11109]
Length = 72
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ + +++ L ++RP + RDGGD+ G+V + + GAC GCP + TLK G+ +L
Sbjct: 1 MKEAVEKSL-AKIRPMLQRDGGDVELVEVEHGVVKVKLTGACKGCPMSQMTLKNGIERLL 59
Query: 177 NHFVPEVKDIRTV 189
VP + + +V
Sbjct: 60 KQEVPGIVSVESV 72
>gi|303245787|ref|ZP_07332070.1| nitrogen-fixing NifU domain protein [Desulfovibrio fructosovorans
JJ]
gi|302493050|gb|EFL52915.1| nitrogen-fixing NifU domain protein [Desulfovibrio fructosovorans
JJ]
Length = 73
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ ++++ L ++RP++ DGGD+ GIV + + GAC GCP + TLK G+ I
Sbjct: 1 MQEKVEAAL-AKIRPSLQADGGDVELVEVTDGGIVKVRLTGACKGCPMSQMTLKNGIERI 59
Query: 176 LNHFVPEVKDIRTV 189
L VP VK + V
Sbjct: 60 LMQSVPGVKAVEAV 73
>gi|323699074|ref|ZP_08110986.1| nitrogen-fixing NifU domain protein [Desulfovibrio sp. ND132]
gi|323459006|gb|EGB14871.1| nitrogen-fixing NifU domain protein [Desulfovibrio desulfuricans
ND132]
Length = 73
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ ++++ VLD +VRP + DGGD+ +GIV + + GAC GCP + TLK G+ I
Sbjct: 1 MQKKVEAVLD-KVRPMLQGDGGDVELVEVTDNGIVKVRLTGACKGCPMSQMTLKNGIERI 59
Query: 176 LNHFVPEVKDIRTV 189
+ +PEVK + V
Sbjct: 60 ILKEIPEVKGVEAV 73
>gi|15603422|ref|NP_246496.1| putative DNA uptake protein [Pasteurella multocida subsp. multocida
str. Pm70]
gi|51702139|sp|Q9CKP9|NFUA_PASMU RecName: Full=Fe/S biogenesis protein nfuA
gi|12721948|gb|AAK03641.1| OrfG [Pasteurella multocida subsp. multocida str. Pm70]
Length = 194
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 14/181 (7%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
++ HF + + RIF + PG + G + + ++
Sbjct: 5 MISDAAQAHFRRLLDQQEEGTHIRIFVVNPGTPNAECGVSYCPPNAVEATDTEMQYASFS 64
Query: 80 MIMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVR 130
++ P + + + + + D+ +++R++ V+ ++
Sbjct: 65 AFVDEIS--LPFLDEAEIDYVTEELGAQLTLKAPNAKMRKVADDAPLLERVEYVIQTQIN 122
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRT 188
P +A GG I DG L G C+GC TLK G+ L P E++ +
Sbjct: 123 PQLAGHGGRITLIEITEDGYAILQFGGGCNGCSMVDVTLKDGIEKQLLSLFPGELQGAKD 182
Query: 189 V 189
V
Sbjct: 183 V 183
>gi|302392635|ref|YP_003828455.1| nitrogen-fixing NifU domain protein [Acetohalobium arabaticum DSM
5501]
gi|302204712|gb|ADL13390.1| nitrogen-fixing NifU domain protein [Acetohalobium arabaticum DSM
5501]
Length = 72
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ + ++ LD ++RP++ DGG + +G+V + + GAC GCP + TLK G+ +L
Sbjct: 1 MKEEVEAALD-KIRPSLEADGGGVELIDVEEGVVKVKLTGACGGCPMSQMTLKNGIERVL 59
Query: 177 NHFVPEVKDIRTV 189
+PEV+ + +V
Sbjct: 60 KEEIPEVEKVESV 72
>gi|242094042|ref|XP_002437511.1| hypothetical protein SORBIDRAFT_10g028390 [Sorghum bicolor]
gi|241915734|gb|EER88878.1| hypothetical protein SORBIDRAFT_10g028390 [Sorghum bicolor]
Length = 240
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ +++VLD VRP++ DGG++ +V L ++GAC CPS++ TLK G+ L
Sbjct: 90 TEENVEKVLDE-VRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRL 148
Query: 177 NHFVPEVKDIRTV 189
+P++ ++ +
Sbjct: 149 RDKIPDILEVEQI 161
Score = 37.5 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 119 QRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++VLD +RP ++ GG + +V + + G +G T++ V L
Sbjct: 173 DNVEKVLDE-IRPYLSGTGGGSLEQLQIDGYVVKIRISGPAAG----VMTVRVAVTQKLR 227
Query: 178 HFVPEVKDIR 187
+P + ++
Sbjct: 228 EKIPSILAVQ 237
>gi|51892183|ref|YP_074874.1| NifU-like nitrogen fixation protein [Symbiobacterium thermophilum
IAM 14863]
gi|51855872|dbj|BAD40030.1| NifU-like nitrogen fixation protein [Symbiobacterium thermophilum
IAM 14863]
Length = 77
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ + +R++ LD +RPA+ DGG++ DG+ + M GAC GCP ++ TLK G+
Sbjct: 2 AEETLFERVERALD-LIRPAIRMDGGEVELVAVEDGVARIRMVGACGGCPMSTMTLKMGI 60
Query: 173 ANILNHFVPEVKDIRTV 189
+ VPE++ + V
Sbjct: 61 ERAVRQQVPEIRAVEAV 77
>gi|302792717|ref|XP_002978124.1| hypothetical protein SELMODRAFT_108525 [Selaginella moellendorffii]
gi|300154145|gb|EFJ20781.1| hypothetical protein SELMODRAFT_108525 [Selaginella moellendorffii]
Length = 185
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 100 MKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACS 159
+ + + + + ++ VLD VRP + DGG++ + +V L ++GAC
Sbjct: 19 AAVATQETAATDDGLALTEENVEMVLDE-VRPYLMSDGGNVALEEIDGLVVKLKLQGACG 77
Query: 160 GCPSASETLKYGVANILNHFVPEVKDIRTV 189
CPS+ T+K G+ L +PE+ + V
Sbjct: 78 SCPSSLMTMKMGIEARLKEKIPEIIGVEQV 107
Score = 37.9 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDS--AVVQRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIV 150
L + + +G ++++ + + + + + +RP + GG + +V
Sbjct: 91 EARLKEKIPEIIGVEQVQDTETGLELTEENVDKILSEIRPYLVGTGGGELTLVKIDGPVV 150
Query: 151 FLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
+ + G +G T++ V L +P + ++
Sbjct: 151 KIRIEGPAAG----VMTVRVAVTQKLREKIPMIAAVQ 183
>gi|119471386|ref|ZP_01613858.1| predicted gluconate transport associated protein [Alteromonadales
bacterium TW-7]
gi|119445662|gb|EAW26946.1| predicted gluconate transport associated protein [Alteromonadales
bacterium TW-7]
Length = 191
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 13/179 (7%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ + R+F + PG + G + +D + +R G
Sbjct: 4 ISETAQAHFAKLLADQSQQTNIRVFVVNPGTSQAECGVSYCP--EDAVEDNDIRLNFNGF 61
Query: 81 IMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVRP 131
P + + + I D+++ +R++ +L+ V P
Sbjct: 62 DAVVDAESAPFLEEAEIDFVTDKMGTQLTLKAPNAKARKIGDDASLNERVQHMLETEVNP 121
Query: 132 AVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+A GG + G+ L G C+GC TLK G+ + E+ + +
Sbjct: 122 QLANHGGQVSLVEITAAGVAVLQFGGGCNGCSMIDVTLKEGIEKEMIAKFDEITGVADI 180
>gi|300087175|ref|YP_003757697.1| nitrogen-fixing NifU domain-containing protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299526908|gb|ADJ25376.1| nitrogen-fixing NifU domain protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 74
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +++KEVL+ +VRP + DGGD+ DGIV + + G+C+GCP + TLK G+ I
Sbjct: 1 MQEKVKEVLE-QVRPNLQADGGDVELVSVSEDGIVTVKLTGSCAGCPMSQMTLKNGIERI 59
Query: 176 LNHFVPEVKDIRT 188
L VPEVK++ +
Sbjct: 60 LKREVPEVKEVVS 72
>gi|298528227|ref|ZP_07015631.1| nitrogen-fixing NifU domain protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511879|gb|EFI35781.1| nitrogen-fixing NifU domain protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 73
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ ++++EVL+ ++RP++ DGGD+ D +V + ++GAC GCP + TLK G+ +
Sbjct: 1 MKEQVQEVLE-KIRPSLQADGGDVELVEVTEDNVVKVQLQGACKGCPMSQMTLKNGIERL 59
Query: 176 LNHFVPEVKDIRTV 189
+ +P++K + +V
Sbjct: 60 IMQELPQIKSVESV 73
>gi|78224272|ref|YP_386019.1| nitrogen-fixing NifU-like [Geobacter metallireducens GS-15]
gi|78195527|gb|ABB33294.1| Nitrogen-fixing NifU-like protein [Geobacter metallireducens GS-15]
Length = 74
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+++ +K+VLD VRPA+ DGGD+ DG+V + + GAC CP ++ TLK G+
Sbjct: 1 MLEEVKKVLDT-VRPALQADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERT 59
Query: 176 LNHFVPEVKDIRTV 189
L VP VK++ +V
Sbjct: 60 LKEKVPGVKEVISV 73
>gi|27467548|ref|NP_764185.1| nitrogen fixation protein NifU [Staphylococcus epidermidis ATCC
12228]
gi|57866465|ref|YP_188114.1| NifU domain-containing protein [Staphylococcus epidermidis RP62A]
gi|242242226|ref|ZP_04796671.1| NifU family protein [Staphylococcus epidermidis W23144]
gi|251810309|ref|ZP_04824782.1| NifU family protein [Staphylococcus epidermidis BCM-HMP0060]
gi|293368312|ref|ZP_06614940.1| NifU domain protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|27315092|gb|AAO04227.1|AE016746_17 nitrogen fixation protein NifU [Staphylococcus epidermidis ATCC
12228]
gi|57637123|gb|AAW53911.1| NifU domain protein [Staphylococcus epidermidis RP62A]
gi|242234321|gb|EES36633.1| NifU family protein [Staphylococcus epidermidis W23144]
gi|251806191|gb|EES58848.1| NifU family protein [Staphylococcus epidermidis BCM-HMP0060]
gi|291317559|gb|EFE57977.1| NifU domain protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|319401786|gb|EFV89994.1| nifU-like domain protein [Staphylococcus epidermidis FRI909]
gi|329726827|gb|EGG63287.1| NifU-like protein [Staphylococcus epidermidis VCU144]
gi|329736812|gb|EGG73077.1| NifU-like protein [Staphylococcus epidermidis VCU028]
gi|329737604|gb|EGG73850.1| NifU-like protein [Staphylococcus epidermidis VCU045]
Length = 80
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + ++ EV++ R+RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 4 ENPTMFDQVAEVIE-RLRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGI 62
Query: 173 ANILNHFVPEVKDIRTV 189
L+ VP V ++ V
Sbjct: 63 ERALHEEVPGVIEVEQV 79
>gi|326534082|dbj|BAJ89391.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD VRP++ RDGG++ +V L ++GAC CPS++ TLK G+ + L
Sbjct: 66 TEENVERVLDE-VRPSLMRDGGNVALHEIDGLVVVLMLQGACGSCPSSTMTLKMGIESRL 124
Query: 177 NHFVPEVKDIRTV 189
+PE+ ++ +
Sbjct: 125 RDKIPEILEVEQI 137
Score = 41.7 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 40/98 (40%), Gaps = 9/98 (9%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAV---VQRIKEVLDNRVRPAVARDGGD-IVFKGYRDGI 149
L D + + ++++ + + +++VLD +RP ++ GG + +
Sbjct: 121 ESRLRDKIPEILEVEQIHDTETGLELNTENVEKVLDE-IRPYLSGTGGGSLDLVQIDGFV 179
Query: 150 VFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
V + + G +G T++ V L +P + +
Sbjct: 180 VKIQISGPAAG----VMTVRVAVTQKLREKIPSILAVE 213
>gi|37522446|ref|NP_925823.1| hypothetical protein gsl2877 [Gloeobacter violaceus PCC 7421]
gi|35213447|dbj|BAC90818.1| gsl2877 [Gloeobacter violaceus PCC 7421]
Length = 85
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASET 167
F + + + E++ + +RP + DGG++ IV L ++GAC CPS++ T
Sbjct: 3 ETFEDEVLELNRDNVELVLDELRPYLMSDGGNVELVEIEGPIVKLRLQGACGSCPSSTYT 62
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
LK G+ + +P V ++ V
Sbjct: 63 LKLGIERRMRELIPAVAEVEQV 84
>gi|86146559|ref|ZP_01064881.1| hypothetical protein MED222_18183 [Vibrio sp. MED222]
gi|85835616|gb|EAQ53752.1| hypothetical protein MED222_18183 [Vibrio sp. MED222]
Length = 194
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 10/182 (5%)
Query: 17 IPGQVVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRP 75
+ + HF+N + R+F + PG + G + + L
Sbjct: 1 MSNITITETAQTHFANLLSQQPEGTNIRVFVVNPGTQNAECGVSYCPTDAIEASDTKLSF 60
Query: 76 PVLGMIME-----HFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNR 128
++ + +G + + D+ +++R++ + +
Sbjct: 61 EAFSAYVDELSLPFLDEAEIDFVTDKMGSQLTLKAPNAKMRKVSDDATLIERVEYAIQTQ 120
Query: 129 VRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDI 186
V P +A GG + +G ++ G C+GC TLK G+ +L F E+ +
Sbjct: 121 VNPQLAGHGGHVSLVEITEEGAAIVAFGGGCNGCSMVDVTLKEGIEKELLQQFEGELTAV 180
Query: 187 RT 188
R
Sbjct: 181 RD 182
>gi|255576215|ref|XP_002529001.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
gi|223531541|gb|EEF33371.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
Length = 226
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD VRP + DGG++ +V L ++GAC CPS+ T+K G+ L
Sbjct: 77 TAENVESVLDE-VRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 135
Query: 177 NHFVPEVKDIRTV 189
+PE+ + +
Sbjct: 136 MEKIPEIVAVEPI 148
Score = 42.5 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 10/96 (10%)
Query: 92 IHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVF 151
I + D+ + E + I++VL+ V GG + + I
Sbjct: 139 IPEIVAVEPIADEETGLELNE------ENIEKVLEEIRPYLVGAAGGSLELVAIEEPIAK 192
Query: 152 LSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
+ + G +G T++ V L +P + ++
Sbjct: 193 IRITGPAAG----VMTVRVAVTQKLREKIPAIAAVQ 224
>gi|255582605|ref|XP_002532084.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
gi|223528244|gb|EEF30298.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
Length = 220
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ +++VLD VRP + DGG++V +V L ++GAC CPS++ TLK G+ L
Sbjct: 70 TEENVEKVLDE-VRPGLMADGGNVVLHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRL 128
Query: 177 NHFVPEVKDIRTV 189
+PE+ + +
Sbjct: 129 RDKIPEIMAVEQI 141
Score = 44.8 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ +++VL +RP +A GG + D IV + + G +G T++ + L
Sbjct: 153 ENVEKVLAE-IRPYLAGTGGGVLELVQIDDYIVKVRLSGPAAG----VMTVRVALTQKLR 207
Query: 178 HFVPEVKDIRTV 189
+P + ++ +
Sbjct: 208 DKIPAIAAVQLI 219
>gi|58177342|pdb|1XHJ|A Chain A, Solution Structure Of The Staphylococcus Epidermidis
Protein Se0630. Northest Structural Genomics Consortium
Target Ser8
Length = 88
Score = 104 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + ++ EV++ R+RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 4 ENPTMFDQVAEVIE-RLRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGI 62
Query: 173 ANILNHFVPEVKDIRTV 189
L+ VP V ++ V
Sbjct: 63 ERALHEEVPGVIEVEQV 79
>gi|319898046|ref|YP_004136243.1| fe/s biogenesis protein nfu [Haemophilus influenzae F3031]
gi|317433552|emb|CBY81936.1| Fe/S biogenesis protein nfu [Haemophilus influenzae F3031]
Length = 198
Score = 104 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 62/178 (34%), Gaps = 10/178 (5%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG- 79
+ HF + + RIF + PG + G + + ++
Sbjct: 10 ISDAAQAHFRKLLDTQEEGTNIRIFVVNPGTPNAECGVSYCPPNAVEESDIEMKYDTFSA 69
Query: 80 MIME----HFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNRVRPAV 133
I E + LG + + D+ +++R++ V+ ++ P +
Sbjct: 70 FIDEVSLPFLEEAEIDYVTEELGAQLTLKAPNAKMRKVADDAPLIERVEYVIQTQINPQL 129
Query: 134 ARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRTV 189
A GG I DG L G C+GC TLK GV L P E+K + +
Sbjct: 130 ANHGGRITLIEITEDGYAVLQFGGGCNGCSMVDVTLKDGVEKQLVSLFPNELKGAKDI 187
>gi|145300948|ref|YP_001143789.1| DNA uptake protein [Aeromonas salmonicida subsp. salmonicida A449]
gi|150383444|sp|A4ST19|NFUA_AERS4 RecName: Full=Fe/S biogenesis protein nfuA
gi|142853720|gb|ABO92041.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 192
Score = 104 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 68/180 (37%), Gaps = 16/180 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF + + R+F + PG + G + + +HL
Sbjct: 4 ISDTAQAHFRKLLKKQPDGTNIRVFVVNPGTQNAECGVSYCPPDAVDPEDQHLPFSGFDC 63
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
+++ + P + + + D D MGS + D+ ++ RI+ VL + V
Sbjct: 64 LVDPLSA--PYLVDATI-DFVTDQMGSQLTLKAPNAKMRKVADDAPLIDRIEYVLMSEVN 120
Query: 131 PAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRT 188
P +A GG + D + L G C+GC TLK G+ L P E+ ++
Sbjct: 121 PMLAGHGGKVTLVELTEDKLAILQFGGGCNGCSMVDYTLKEGIEKQLLEKFPGELNGVKD 180
>gi|329122310|ref|ZP_08250898.1| Fe/S-biogenesis protein NfuA [Haemophilus aegyptius ATCC 11116]
gi|327473871|gb|EGF19288.1| Fe/S-biogenesis protein NfuA [Haemophilus aegyptius ATCC 11116]
Length = 198
Score = 104 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 63/178 (35%), Gaps = 10/178 (5%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG- 79
+ HF + + RIF + PG+ + G + + ++
Sbjct: 10 ISDAAQAHFRKLLDTQEEGTNIRIFVVNPGMPNAECGVSYCPPNAVEESDIEMKYDTFSA 69
Query: 80 MIME----HFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNRVRPAV 133
I E + LG + + D+ +++R++ V+ ++ P +
Sbjct: 70 FIDEVSLPFLEEAEIDYVTEELGAQLTLKAPNAKMRKVADDAPLIERVEYVIQTQINPQL 129
Query: 134 ARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRTV 189
A GG I DG L G C+GC TLK GV L P E+K + +
Sbjct: 130 ANHGGRITLIEITEDGYAVLQFGGGCNGCSMVDVTLKDGVEKQLVSLFPNELKGAKDI 187
>gi|323497032|ref|ZP_08102055.1| Fe/S biogenesis protein NfuA [Vibrio sinaloensis DSM 21326]
gi|323317876|gb|EGA70864.1| Fe/S biogenesis protein NfuA [Vibrio sinaloensis DSM 21326]
Length = 195
Score = 104 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 68/181 (37%), Gaps = 16/181 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+N + R+F + PG + G + + L
Sbjct: 6 TITENAQSHFANLLSQQPEGTNIRVFVVNPGTQNAECGVSYCPPEAIESTDTELTYEHFS 65
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ P + + + D D MGS + D+ +++R++ V+ +V
Sbjct: 66 AYVDELS--LPFLEDAEI-DFVTDKMGSQLTLKAPNAKMRKVSDDAPLLERVEYVIQTQV 122
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIR 187
P +A GG + G+ +S G C+GC TLK G+ +L F E+ +R
Sbjct: 123 NPQLAGHGGHVNLVEITEQGVAIVSFGGGCNGCSMVDVTLKEGIEKELLQQFEGELTAVR 182
Query: 188 T 188
Sbjct: 183 D 183
>gi|88861082|ref|ZP_01135717.1| hypothetical protein PTD2_16836 [Pseudoalteromonas tunicata D2]
gi|88817010|gb|EAR26830.1| hypothetical protein PTD2_16836 [Pseudoalteromonas tunicata D2]
Length = 191
Score = 104 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 65/181 (35%), Gaps = 15/181 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F + PG + G + D + + G
Sbjct: 3 TISETAQSHFAKLLADQAEGTNIRVFVVNPGTSKAECGVSYCPP--DAVEETDIHLEFNG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGS----------GDFIESDSAVVQRIKEVLDNRV 129
P + + D D MGS + +++ +R++ ++D V
Sbjct: 61 FNAVVDAESAPFLTEAEI-DFVTDKMGSQLTLKAPNAKAKKLSDGASLAERVQHMIDTEV 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P +A GG + +DGI L G C+GC TLK G+ + E+ +R
Sbjct: 120 NPQLANHGGQVSLVEITKDGIAVLQFGGGCNGCSMIDVTLKEGIEKEMIAKFDEITGVRD 179
Query: 189 V 189
+
Sbjct: 180 I 180
>gi|301064688|ref|ZP_07205077.1| NifU-like protein [delta proteobacterium NaphS2]
gi|300441230|gb|EFK05606.1| NifU-like protein [delta proteobacterium NaphS2]
Length = 75
Score = 104 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +++++ L+ +VRP++ DGGD+ +G+V + + GAC GCP + TLK G+ +
Sbjct: 3 LREKVQDALE-KVRPSLQADGGDVQLVDVDANGLVKVKLTGACGGCPMSQMTLKMGIEKV 61
Query: 176 LNHFVPEVKDIRT 188
L VPEV + +
Sbjct: 62 LKQNVPEVTSVES 74
>gi|297803520|ref|XP_002869644.1| hypothetical protein ARALYDRAFT_492226 [Arabidopsis lyrata subsp.
lyrata]
gi|297315480|gb|EFH45903.1| hypothetical protein ARALYDRAFT_492226 [Arabidopsis lyrata subsp.
lyrata]
Length = 238
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD VRP++ DGG++ +V L ++GAC CPS+S TLK G+ + L
Sbjct: 87 TEENVERVLDE-VRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRL 145
Query: 177 NHFVPEVKDIRT 188
+PE+ +
Sbjct: 146 RDKIPEIMSVEQ 157
Score = 42.9 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 119 QRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSAS-ETLKYGVANIL 176
+ I++VL + +RP ++ GG + IV + + G P+A T++ + L
Sbjct: 171 ENIEKVL-SELRPYLSGTGGGGLELVEIDGYIVKVRLSG-----PAAGVMTVRVALTQKL 224
Query: 177 NHFVPEVKDIR 187
+P + ++
Sbjct: 225 RENIPSIGAVQ 235
>gi|68249033|ref|YP_248145.1| putative DNA uptake protein [Haemophilus influenzae 86-028NP]
gi|145628803|ref|ZP_01784603.1| conserved hypothetical 21.9 kD protein in locus involved in
transformation [Haemophilus influenzae 22.1-21]
gi|145636298|ref|ZP_01791967.1| predicted gluconate transport-associated protein [Haemophilus
influenzae PittHH]
gi|145638657|ref|ZP_01794266.1| predicted gluconate transport-associated protein [Haemophilus
influenzae PittII]
gi|145640398|ref|ZP_01795982.1| conserved hypothetical 21.9 kD protein in locus involved in
transformation [Haemophilus influenzae R3021]
gi|148825287|ref|YP_001290040.1| putative DNA uptake protein [Haemophilus influenzae PittEE]
gi|148827630|ref|YP_001292383.1| putative DNA uptake protein [Haemophilus influenzae PittGG]
gi|319775640|ref|YP_004138128.1| Fe/S biogenesis protein nfu [Haemophilus influenzae F3047]
gi|81336556|sp|Q4QNB2|NFUA_HAEI8 RecName: Full=Fe/S biogenesis protein nfuA
gi|166990525|sp|A5UA56|NFUA_HAEIE RecName: Full=Fe/S biogenesis protein nfuA
gi|166990526|sp|A5UGU4|NFUA_HAEIG RecName: Full=Fe/S biogenesis protein nfuA
gi|68057232|gb|AAX87485.1| conserved hypothetical 21.9 kD protein in locus involved in
transformation [Haemophilus influenzae 86-028NP]
gi|144979273|gb|EDJ88959.1| conserved hypothetical 21.9 kD protein in locus involved in
transformation [Haemophilus influenzae 22.1-21]
gi|145270463|gb|EDK10397.1| predicted gluconate transport-associated protein [Haemophilus
influenzae PittHH]
gi|145272252|gb|EDK12160.1| predicted gluconate transport-associated protein [Haemophilus
influenzae PittII]
gi|145274984|gb|EDK14846.1| conserved hypothetical 21.9 kD protein in locus involved in
transformation [Haemophilus influenzae 22.4-21]
gi|148715447|gb|ABQ97657.1| predicted gluconate transport-associated protein [Haemophilus
influenzae PittEE]
gi|148718872|gb|ABQ99999.1| conserved hypothetical 21.9 kD protein in locus involved in
transformation [Haemophilus influenzae PittGG]
gi|301169133|emb|CBW28730.1| predicted gluconate transport associated protein [Haemophilus
influenzae 10810]
gi|309750151|gb|ADO80135.1| Fe/S biogenesis protein NfuA [Haemophilus influenzae R2866]
gi|317450231|emb|CBY86447.1| Fe/S biogenesis protein nfu [Haemophilus influenzae F3047]
Length = 198
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 62/178 (34%), Gaps = 10/178 (5%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG- 79
+ HF + + RIF + PG + G + + ++
Sbjct: 10 ISDAAQAHFRKLLDTQEEGTNIRIFVVNPGTPNAECGVSYCPPNAVEESDIEMKYNTFSA 69
Query: 80 MIME----HFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNRVRPAV 133
I E + LG + + D+ +++R++ V+ ++ P +
Sbjct: 70 FIDEVSLPFLEEAEIDYVTEELGAQLTLKAPNAKMRKVADDAPLIERVEYVIQTQINPQL 129
Query: 134 ARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRTV 189
A GG I DG L G C+GC TLK GV L P E+K + +
Sbjct: 130 ANHGGRITLIEITEDGYAVLQFGGGCNGCSMVDVTLKDGVEKQLVSLFPNELKGAKDI 187
>gi|308272822|emb|CBX29426.1| hypothetical protein N47_J04070 [uncultured Desulfobacterium sp.]
Length = 61
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
+RP + +DGGD+ +GIV + ++GAC+GCP + TLK G+ +L VP VK +
Sbjct: 1 MRPMLQKDGGDVEIVDVSEGIVKVRLQGACAGCPMSQMTLKNGIEKLLMQDVPGVKSVVA 60
Query: 189 V 189
V
Sbjct: 61 V 61
>gi|57651628|ref|YP_185809.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
COL]
gi|57285814|gb|AAW37908.1| NifU domain protein [Staphylococcus aureus subsp. aureus COL]
Length = 73
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ EV++ R+RP + RDGGD DGIV L + GAC CPS++ TLK G+ L
Sbjct: 1 MFDQVAEVIE-RLRPFLLRDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGIERAL 59
Query: 177 NHFVPEVKDIRTV 189
+ VP V ++ V
Sbjct: 60 HEEVPGVIEVEQV 72
>gi|149000|gb|AAA25015.1| The predicted molecular weight and pI of ORF G are 21.8 Kd and 4.3
respectively; ORF G; putative [Haemophilus influenzae]
Length = 198
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 63/178 (35%), Gaps = 10/178 (5%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG- 79
+ HF + + RIF++ PG + G + + ++
Sbjct: 10 ISDAAQAHFRKLLDTQEEGTHIRIFAVNPGTPNAECGVSYCPPNAVEESDIEMKYNTFSA 69
Query: 80 MIME----HFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNRVRPAV 133
I E + LG + + D+ +++R++ V+ ++ P +
Sbjct: 70 FIDEVSLPFLEEAEIDYVTEELGAQLTLKAPNAKMRKVADDAPLIERVEYVIQTQINPQL 129
Query: 134 ARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRTV 189
A GG I DG L G C+GC TLK GV L P E+K + +
Sbjct: 130 ANHGGRITLIEITEDGYAVLQFGGGCNGCSMVDVTLKDGVEKQLVSLFPNELKGAKDI 187
>gi|120554445|ref|YP_958796.1| HesB/YadR/YfhF-family protein [Marinobacter aquaeolei VT8]
gi|120324294|gb|ABM18609.1| HesB/YadR/YfhF-family protein [Marinobacter aquaeolei VT8]
Length = 195
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 61/161 (37%), Gaps = 13/161 (8%)
Query: 40 PLASRIFS-IPGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLG 98
+ RIF PG + + + E + + ++H + P + + +
Sbjct: 25 GMGVRIFVTQPGTRNAETCLAYCPPNEVVPTDEQVNLEKFTLYLDH--NSVPFLEDAYVD 82
Query: 99 DMKLDDMGSGDFIE---------SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDG 148
K G D+ + +R+ VL + + P +A GGD+ +
Sbjct: 83 YSKDQMGGQLTIKAPNAKVPQVADDAPLPERVNYVLASEINPNLAAHGGDVSLVEIVDES 142
Query: 149 IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+ L G C GC + S TLK GV L VPE+ +R V
Sbjct: 143 VAVLRFGGGCQGCSAVSLTLKQGVEKTLKERVPEISAVRDV 183
>gi|317154501|ref|YP_004122549.1| nitrogen-fixing NifU domain-containing protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316944752|gb|ADU63803.1| nitrogen-fixing NifU domain protein [Desulfovibrio aespoeensis
Aspo-2]
Length = 74
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANI 175
+ +++ +VLD +VRPA+ DGGD+ D GIV + + GAC GCP + TLK G+ I
Sbjct: 1 MREKVMKVLD-KVRPALQGDGGDVELVDITDKGIVQVRLTGACKGCPMSQMTLKNGIERI 59
Query: 176 LNHFVPEVKDIRTV 189
+ +PE+K + V
Sbjct: 60 ILKEIPEIKGVEAV 73
>gi|315128008|ref|YP_004070011.1| DNA uptake protein [Pseudoalteromonas sp. SM9913]
gi|315016522|gb|ADT69860.1| putative DNA uptake protein [Pseudoalteromonas sp. SM9913]
Length = 191
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 13/179 (7%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ + R+F + PG + G + +D + +R G
Sbjct: 4 ISETAQAHFAKLLADQSQQTNIRVFVVNPGTSQAECGVSYCP--EDAVEESDIRLNFNGF 61
Query: 81 IMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVRP 131
P + + + + D+++ +R++ +L+ V P
Sbjct: 62 DAVVDAESAPFLAEAEIDFVTDKMGTQLTLKAPNAKARKLGEDASLNERVQHMLETEVNP 121
Query: 132 AVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+A GG + GI L G C+GC TLK G+ + E+ + +
Sbjct: 122 QLANHGGQVSLVEITAAGIAVLQFGGGCNGCSMIDVTLKEGIEKEMIAKFDEITGVADI 180
>gi|85859635|ref|YP_461837.1| nifU-like domain-containing protein [Syntrophus aciditrophicus SB]
gi|85722726|gb|ABC77669.1| nifU-like domain protein [Syntrophus aciditrophicus SB]
Length = 73
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +++E +D +VRP + DGGD+ DG+V + + GAC GC + TLK G+
Sbjct: 1 MKDKVQEAID-QVRPGLQADGGDVELVDVTEDGVVKVRLVGACRGCAMSQMTLKMGIERF 59
Query: 176 LNHFVPEVKDIRTV 189
L +PEVK++ V
Sbjct: 60 LKERIPEVKEVVAV 73
>gi|115469688|ref|NP_001058443.1| Os06g0694500 [Oryza sativa Japonica Group]
gi|53791826|dbj|BAD53892.1| putative Nuclear-encoded plastid gene, NifU1 [Oryza sativa Japonica
Group]
gi|53792847|dbj|BAD53880.1| putative Nuclear-encoded plastid gene, NifU1 [Oryza sativa Japonica
Group]
gi|113596483|dbj|BAF20357.1| Os06g0694500 [Oryza sativa Japonica Group]
gi|215678926|dbj|BAG96356.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695250|dbj|BAG90441.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218198813|gb|EEC81240.1| hypothetical protein OsI_24300 [Oryza sativa Indica Group]
gi|222636145|gb|EEE66277.1| hypothetical protein OsJ_22478 [Oryza sativa Japonica Group]
Length = 219
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD +VRP++ DGG++ +V L ++GAC CPS++ TLK G+ L
Sbjct: 69 TEENVEMVLD-QVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRL 127
Query: 177 NHFVPEVKDIRTV 189
+PE+ + +
Sbjct: 128 RDKIPEILAVEQI 140
Score = 44.4 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 119 QRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ +VLD +RP ++ GG + + +V + + G +G T++ V L
Sbjct: 152 DNVDKVLDE-IRPYLSGTGGGSLDLVQIDESVVKVRLTGPAAG----VMTVRVAVTQKLR 206
Query: 178 HFVPEVKDIR 187
+P + ++
Sbjct: 207 EKIPSILAVQ 216
>gi|62734078|gb|AAX96187.1| Similar to seven transmembrane protein Mlo4 [Oryza sativa Japonica
Group]
Length = 980
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD VRP + DGG++ +V L ++GAC CP++ T+K G+ L
Sbjct: 571 TAENVEIVLDE-VRPYLMADGGNVALHEIDGNVVRLKLQGACGSCPASVTTMKMGIERRL 629
Query: 177 NHFVPEVKDIRTV 189
+PE+ + +
Sbjct: 630 MEKIPEIVAVEPI 642
Score = 47.9 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 119 QRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSAS-ETLKYGVANIL 176
+ I++VLD +RP ++ GG + F + IV + + G P+A T++ + L
Sbjct: 654 ENIEKVLDE-IRPYLSGTGGGELEFVAIEEPIVKVRLTG-----PAAGVMTVRVALTQKL 707
Query: 177 NHFVPEVKDIR 187
+P++ ++
Sbjct: 708 REKIPKIAAVQ 718
>gi|145632678|ref|ZP_01788412.1| conserved hypothetical 21.9 kD protein in locus involved in
transformation [Haemophilus influenzae 3655]
gi|145634570|ref|ZP_01790279.1| predicted gluconate transport-associated protein [Haemophilus
influenzae PittAA]
gi|229844407|ref|ZP_04464547.1| putative DNA uptake protein [Haemophilus influenzae 6P18H1]
gi|229846519|ref|ZP_04466627.1| putative DNA uptake protein [Haemophilus influenzae 7P49H1]
gi|144986873|gb|EDJ93425.1| conserved hypothetical 21.9 kD protein in locus involved in
transformation [Haemophilus influenzae 3655]
gi|145268115|gb|EDK08110.1| predicted gluconate transport-associated protein [Haemophilus
influenzae PittAA]
gi|229810612|gb|EEP46330.1| putative DNA uptake protein [Haemophilus influenzae 7P49H1]
gi|229812656|gb|EEP48345.1| putative DNA uptake protein [Haemophilus influenzae 6P18H1]
gi|309972410|gb|ADO95611.1| Fe/S biogenesis protein NfuA [Haemophilus influenzae R2846]
Length = 198
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 63/178 (35%), Gaps = 10/178 (5%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG- 79
+ +HF + + RIF + PG + G + + ++
Sbjct: 10 ISDAAQVHFRKLLDTQEEGTNIRIFVVNPGTPNAECGVSYCPPNAVEESDIEMKYNTFSA 69
Query: 80 MIME----HFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNRVRPAV 133
I E + LG + + D+ +++R++ V+ ++ P +
Sbjct: 70 FIDEVSLPFLEEAEIDYVTEELGAQLTLKAPNAKMRKVADDAPLIERVEYVIQTQINPQL 129
Query: 134 ARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRTV 189
A GG I DG L G C+GC TLK GV L P E+K + +
Sbjct: 130 ANHGGRITLIEITEDGYAVLQFGGGCNGCSMVDVTLKDGVEKQLVSLFPNELKGAKDI 187
>gi|167855552|ref|ZP_02478314.1| predicted gluconate transport-associated protein [Haemophilus
parasuis 29755]
gi|167853353|gb|EDS24605.1| predicted gluconate transport-associated protein [Haemophilus
parasuis 29755]
Length = 193
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 64/174 (36%), Gaps = 16/174 (9%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
HF + + RIF + PG S G + V + ++ ++
Sbjct: 12 HFRKLLDQQEEGTNIRIFVVNPGTPSAECGVSYCPVNAVEETDTEIKFEQFSAFIDEIS- 70
Query: 88 GDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVRPAVARDG 137
P + + + D D MGS + D+ ++R+ V+ ++ P +A G
Sbjct: 71 -LPFLEDAEI-DYVTDPMGSQLTLKAPNAKMKKVADDAPFIERLDYVIQTQINPQLASHG 128
Query: 138 GDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRTV 189
G + D L G C+GC TLK G+ L P E+ ++ V
Sbjct: 129 GRVTLIEVTEDKYAVLQFGGGCNGCSMVDVTLKEGIEKQLLALFPEELVGVKDV 182
>gi|84386342|ref|ZP_00989370.1| hypothetical protein V12B01_02495 [Vibrio splendidus 12B01]
gi|84378766|gb|EAP95621.1| hypothetical protein V12B01_02495 [Vibrio splendidus 12B01]
Length = 194
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 10/182 (5%)
Query: 17 IPGQVVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRP 75
+ + HF+N + R+F + PG + G + + L
Sbjct: 1 MSNITITETAQTHFANLLSQQPEGTNIRVFVVNPGTQNAECGVSYCPTDAIEASDTKLSF 60
Query: 76 PVLGMIME-----HFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNR 128
++ + +G + + D+ +++R++ + +
Sbjct: 61 DAFSAYVDELSLPFLDEAEIDFVTDKMGSQLTLKAPNAKMRKVSDDATLIERVEYAIQTQ 120
Query: 129 VRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDI 186
V P +A GG + +G ++ G C+GC TLK G+ +L F E+ +
Sbjct: 121 VNPQLAGHGGHVSLVEITEEGAAIVAFGGGCNGCSMVDVTLKEGIEKELLQQFEGELTAV 180
Query: 187 RT 188
R
Sbjct: 181 RD 182
>gi|4538920|emb|CAB39656.1| nitrogen fixation like protein [Arabidopsis thaliana]
gi|7269442|emb|CAB79446.1| nitrogen fixation like protein [Arabidopsis thaliana]
Length = 224
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD VRP++ DGG++ +V L ++GAC CPS+S TLK G+ + L
Sbjct: 73 TEENVERVLDE-VRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRL 131
Query: 177 NHFVPEVKDIRT 188
+PE+ +
Sbjct: 132 RDKIPEIMSVEQ 143
Score = 42.9 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 119 QRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSAS-ETLKYGVANIL 176
+ I++VL + +RP ++ GG + +V + + G P+A T++ + L
Sbjct: 157 ENIEKVL-SELRPYLSGTGGGGLELVEIDGYVVKVRLTG-----PAAGVMTVRVALTQKL 210
Query: 177 NHFVPEVKDIR 187
+P + ++
Sbjct: 211 RETIPSIGAVQ 221
>gi|118487917|gb|ABK95780.1| unknown [Populus trichocarpa]
Length = 224
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ +++VLD VRP + RDGG++ +V L ++GAC CPS+S TLK G+ L
Sbjct: 74 TEENVEKVLDE-VRPGLMRDGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIETKL 132
Query: 177 NHFVPEVKDIRTV 189
+PE+ D+ +
Sbjct: 133 RDKIPEIMDVEQI 145
Score = 45.2 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 100 MKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGAC 158
++ D+ E+ + + E +RP +A GG + D +V + + G
Sbjct: 137 PEIMDVEQIMDTETGLELNEENVEKALAEIRPYLAGTGGGVLELVQINDYVVKVRLSGPA 196
Query: 159 SGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+G T++ + L +P + ++ +
Sbjct: 197 AG----VMTVRVALTQKLRETIPAIAAVQLI 223
>gi|18416645|ref|NP_567735.1| NFU3; structural molecule [Arabidopsis thaliana]
gi|75147908|sp|Q84RQ7|NIFU3_ARATH RecName: Full=NifU-like protein 3, chloroplastic; Short=AtCNfu3;
Short=AtCnfU-IVa; Flags: Precursor
gi|28207820|emb|CAD55560.1| NFU3 protein [Arabidopsis thaliana]
gi|88196759|gb|ABD43022.1| At4g25910 [Arabidopsis thaliana]
gi|222423670|dbj|BAH19802.1| AT4G25910 [Arabidopsis thaliana]
gi|332659732|gb|AEE85132.1| NifU-like protein 3 [Arabidopsis thaliana]
Length = 236
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD VRP++ DGG++ +V L ++GAC CPS+S TLK G+ + L
Sbjct: 85 TEENVERVLDE-VRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRL 143
Query: 177 NHFVPEVKDIRT 188
+PE+ +
Sbjct: 144 RDKIPEIMSVEQ 155
Score = 42.9 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 119 QRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I++VL + +RP ++ GG + +V + + G +G T++ + L
Sbjct: 169 ENIEKVL-SELRPYLSGTGGGGLELVEIDGYVVKVRLTGPAAG----VMTVRVALTQKLR 223
Query: 178 HFVPEVKDIR 187
+P + ++
Sbjct: 224 ETIPSIGAVQ 233
>gi|308070638|ref|YP_003872243.1| thioredoxin-like protein [Paenibacillus polymyxa E681]
gi|305859917|gb|ADM71705.1| Thioredoxin-like protein [Paenibacillus polymyxa E681]
Length = 81
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 113 SDSAVVQRIKEVLD--NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
S++ VQ EV D +++RP + RDGGD+ DGIV L + GAC CPS++ TLK
Sbjct: 2 SETQSVQMYDEVADVLDKLRPFLQRDGGDVELVDVEDGIVKLKLVGACGSCPSSTITLKA 61
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ L V V+++ V
Sbjct: 62 GIERALLEEVDGVQEVVQV 80
>gi|222054851|ref|YP_002537213.1| nitrogen-fixing NifU domain protein [Geobacter sp. FRC-32]
gi|221564140|gb|ACM20112.1| nitrogen-fixing NifU domain protein [Geobacter sp. FRC-32]
Length = 73
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+++ +K+VLD +RP + DGGD+ DG+V + + GAC CP ++ TLK G+
Sbjct: 1 MIEDVKKVLDT-IRPNLQADGGDVELVEVGEDGVVKVKLVGACGHCPMSTMTLKMGIERT 59
Query: 176 LNHFVPEVKDIRTV 189
L VP VK++ +V
Sbjct: 60 LKEKVPGVKEVISV 73
>gi|219871269|ref|YP_002475644.1| putative DNA uptake protein [Haemophilus parasuis SH0165]
gi|219691473|gb|ACL32696.1| putative DNA uptake protein, cytoplasmic protein [Haemophilus
parasuis SH0165]
Length = 194
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 64/174 (36%), Gaps = 16/174 (9%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
HF + + RIF + PG S G + V + ++ ++
Sbjct: 13 HFRKLLDQQEEGTNIRIFVVNPGTPSAECGVSYCPVNAVEETDTEIKFEQFSAFIDEIS- 71
Query: 88 GDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVRPAVARDG 137
P + + + D D MGS + D+ ++R+ V+ +V P +A G
Sbjct: 72 -LPFLEDAEI-DYVTDPMGSQLTLKAPNAKMKKVADDAPFIERLDYVIQTQVNPQLASHG 129
Query: 138 GDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRTV 189
G + D L G C+GC TLK G+ L P E+ ++ V
Sbjct: 130 GRVTLIEVTEDKYAVLQFGGGCNGCSMVDVTLKEGIEKQLLALFPEELVGVKDV 183
>gi|148263012|ref|YP_001229718.1| NifU domain-containing protein [Geobacter uraniireducens Rf4]
gi|146396512|gb|ABQ25145.1| nitrogen-fixing NifU domain protein [Geobacter uraniireducens Rf4]
Length = 73
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+++ +K+VLD +RP + DGGD+ DG+V + + GAC CP ++ TLK G+
Sbjct: 1 MIEEVKKVLD-LIRPNLQADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERT 59
Query: 176 LNHFVPEVKDIRTV 189
L VP VK++ +V
Sbjct: 60 LKEKVPGVKEVISV 73
>gi|21554503|gb|AAM63593.1| nitrogen fixation like protein [Arabidopsis thaliana]
Length = 236
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD VRP++ DGG++ +V L ++GAC CPS+S TLK G+ + L
Sbjct: 85 TEENVERVLDE-VRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRL 143
Query: 177 NHFVPEVKDIRT 188
+PE+ +
Sbjct: 144 RDKIPEIMSVEQ 155
Score = 42.5 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 119 QRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I++VL + +RP ++ GG + +V + + G +G T++ + L
Sbjct: 169 ENIEKVL-SELRPYLSGTGGGGLELVEIDGYVVKVRLTGPAAG----VMTVRVALTQKLR 223
Query: 178 HFVPEVKDIR 187
+P + ++
Sbjct: 224 ETIPSIGAVQ 233
>gi|291287157|ref|YP_003503973.1| nitrogen-fixing NifU domain protein [Denitrovibrio acetiphilus DSM
12809]
gi|290884317|gb|ADD68017.1| nitrogen-fixing NifU domain protein [Denitrovibrio acetiphilus DSM
12809]
Length = 75
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ QR++EVLD +VRP + DGGDI DGIV + + GAC CP ++ TLK+GV
Sbjct: 3 LKQRVEEVLD-QVRPTLQADGGDIELLDVSEDGIVKVQLTGACGSCPFSTMTLKHGVEAR 61
Query: 176 LNHFVPEVKDIRTV 189
L +PEVK++ ++
Sbjct: 62 LKDMIPEVKEVLSI 75
>gi|167037171|ref|YP_001664749.1| NifU domain-containing protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|167040690|ref|YP_001663675.1| NifU domain-containing protein [Thermoanaerobacter sp. X514]
gi|256751269|ref|ZP_05492149.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914731|ref|ZP_07132047.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter sp. X561]
gi|307724035|ref|YP_003903786.1| nitrogen-fixing NifU domain-containing protein [Thermoanaerobacter
sp. X513]
gi|320115589|ref|YP_004185748.1| nitrogen-fixing NifU domain-containing protein [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|166854930|gb|ABY93339.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter sp. X514]
gi|166856005|gb|ABY94413.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256749824|gb|EEU62848.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889666|gb|EFK84812.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter sp. X561]
gi|307581096|gb|ADN54495.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter sp. X513]
gi|319928680|gb|ADV79365.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 73
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +R++EVL+ +RP++ DGGD+ DGIV + + GAC GCP A+ TLK G+
Sbjct: 1 MRERVEEVLE-LLRPSLQADGGDVELIDVTEDGIVKVRLTGACGGCPFATLTLKEGIERA 59
Query: 176 LNHFVPEVKDIRTV 189
+ +PEVK++ V
Sbjct: 60 IKEEIPEVKEVIAV 73
>gi|39995588|ref|NP_951539.1| NifU-like domain-containing protein [Geobacter sulfurreducens PCA]
gi|39982351|gb|AAR33812.1| NifU-like domain protein [Geobacter sulfurreducens PCA]
gi|298504607|gb|ADI83330.1| thioredoxin/NifU-like domain protein [Geobacter sulfurreducens
KN400]
Length = 74
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+++ +K+VLD VRPA+ DGGD+ DG+V + + GAC CP ++ TLK G+
Sbjct: 1 MLEDVKKVLD-LVRPALQADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERT 59
Query: 176 LNHFVPEVKDIRTV 189
L VP VK++ +V
Sbjct: 60 LKEKVPGVKEVVSV 73
>gi|73663148|ref|YP_301929.1| hypothetical protein SSP1839 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495663|dbj|BAE18984.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 80
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + ++ EV++ ++RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 4 ENVTMFDQVAEVIE-KLRPFLLRDGGDCSLVDVEDGIVKLQLHGACGTCPSSTITLKAGI 62
Query: 173 ANILNHFVPEVKDIRTV 189
L+ VP V ++ V
Sbjct: 63 ERALHEEVPGVIEVEQV 79
>gi|229816700|ref|ZP_04446988.1| hypothetical protein COLINT_03748 [Collinsella intestinalis DSM
13280]
gi|229807752|gb|EEP43566.1| hypothetical protein COLINT_03748 [Collinsella intestinalis DSM
13280]
Length = 98
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 122 KEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
KEVL+ ++RP + DGGD+ + G DG+V L ++GAC+GCP +S TL GV IL V
Sbjct: 14 KEVLE-QIRPNLQADGGDMEYIGVTEDGVVKLELQGACAGCPMSSLTLSMGVERILKEHV 72
Query: 181 PEVKDIRTV 189
P V + V
Sbjct: 73 PGVTRVEQV 81
>gi|52426287|ref|YP_089424.1| putative DNA uptake protein [Mannheimia succiniciproducens MBEL55E]
gi|81386480|sp|Q65QC1|NFUA_MANSM RecName: Full=Fe/S biogenesis protein nfuA
gi|52308339|gb|AAU38839.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 194
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 14/173 (8%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFIS 87
HF + + RIF + PG + G + + ++ ++
Sbjct: 13 HFRKLLDQQEEGTNIRIFVVNPGTPNAECGVSYCPPNAVEATDTEMKYATFSAFVDEVS- 71
Query: 88 GDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGG 138
P + + + + + + D+ +++R+ V+ ++ P +A GG
Sbjct: 72 -LPFLEDAEIDYVTEELGTQLTLKAPNAKMRKVADDAPLIERVDYVIQTQINPQLASHGG 130
Query: 139 DIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNH-FVPEVKDIRTV 189
I +G L G C+GC TLK GV L F E+K + +
Sbjct: 131 RITLVEITDEGYAILQFGGGCNGCSMVDVTLKDGVEKQLVELFAGELKGAKDI 183
>gi|16272381|ref|NP_438594.1| putative DNA uptake protein [Haemophilus influenzae Rd KW20]
gi|260580504|ref|ZP_05848332.1| Fe/S biogenesis protein nfuA [Haemophilus influenzae RdAW]
gi|1176271|sp|P31774|NFUA_HAEIN RecName: Full=Fe/S biogenesis protein nfuA
gi|148877|gb|AAA24950.1| ORF 3 [Haemophilus influenzae]
gi|1573408|gb|AAC22092.1| orfG protein [Haemophilus influenzae Rd KW20]
gi|260092846|gb|EEW76781.1| Fe/S biogenesis protein nfuA [Haemophilus influenzae RdAW]
Length = 198
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 62/178 (34%), Gaps = 10/178 (5%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG- 79
+ HF + + RIF + PG + G + + ++
Sbjct: 10 ISDAAQAHFRKLLDTQEEGTHIRIFVVNPGTPNAECGVSYCPPNAVEESDIEMKYNTFSA 69
Query: 80 MIME----HFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNRVRPAV 133
I E + LG + + D+ +++R++ V+ ++ P +
Sbjct: 70 FIDEVSLPFLEEAEIDYVTEELGAQLTLKAPNAKMRKVADDAPLIERVEYVIQTQINPQL 129
Query: 134 ARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRTV 189
A GG I DG L G C+GC TLK GV L P E+K + +
Sbjct: 130 ANHGGRITLIEITEDGYAVLQFGGGCNGCSMVDVTLKDGVEKQLVSLFPNELKGAKDI 187
>gi|332533247|ref|ZP_08409114.1| hypothetical protein PH505_an00610 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332037326|gb|EGI73781.1| hypothetical protein PH505_an00610 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 191
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 13/179 (7%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ + R+F + PG + G + +D + +R G
Sbjct: 4 ISETAQAHFAKLLADQSQQTNIRVFVVNPGSSQAECGVSYCP--EDAVEASDIRLNFNGF 61
Query: 81 IMEHFISGDPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVRP 131
P + + + I D+++ +R++ +L+ V P
Sbjct: 62 DAVVDAESAPFLEEAEIDFVTDKMGTQLTLKAPNAKARKIGDDASLNERVQHMLETEVNP 121
Query: 132 AVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+A GG + GI L G C+GC TLK G+ + E+ + +
Sbjct: 122 QLANHGGQVSLVEITAAGIAILQFGGGCNGCSMIDVTLKEGIEKEMIAKFEEITGVADI 180
>gi|258620406|ref|ZP_05715444.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258624640|ref|ZP_05719576.1| Fe/S biogenesis protein nfuA [Vibrio mimicus VM603]
gi|262166729|ref|ZP_06034466.1| protein gntY [Vibrio mimicus VM223]
gi|262170348|ref|ZP_06038026.1| protein gntY [Vibrio mimicus MB-451]
gi|258583104|gb|EEW07917.1| Fe/S biogenesis protein nfuA [Vibrio mimicus VM603]
gi|258587285|gb|EEW11996.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|261891424|gb|EEY37410.1| protein gntY [Vibrio mimicus MB-451]
gi|262026445|gb|EEY45113.1| protein gntY [Vibrio mimicus VM223]
Length = 195
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 16/181 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F + PG + G + + + P G
Sbjct: 6 TITESAQSHFAKLLAQQPEGTNIRVFVVNPGTQNAECGVSYCPP--EAVEATDTEYPFSG 63
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
P + + D D MGS + D+ +++R++ L +V
Sbjct: 64 FSAYVDELSLPFLEEAVI-DFVTDKMGSQLTLKAPNAKMRKVADDAPLMERVEYALQTQV 122
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIR 187
P +A GG + DG+ + G C+GC TLK G+ +L F E+ +R
Sbjct: 123 NPQLAGHGGHVSLISISDDGVALVQFGGGCNGCSMVDVTLKEGIEKELLAQFAGELTAVR 182
Query: 188 T 188
Sbjct: 183 D 183
>gi|327485189|gb|AEA79596.1| NfuA Fe-S protein maturation [Vibrio cholerae LMA3894-4]
Length = 195
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 16/181 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F + PG + G + + + P G
Sbjct: 6 TITESAQSHFAKLLAQQPEGTNIRVFVVNPGTQNAECGVSYCPP--EAVEATDTEYPFSG 63
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
P + + D D MGS + D+ +++R++ L +V
Sbjct: 64 FSAYVDELSLPFLEEAVI-DFVTDKMGSQLTLKAPNAKMRKVSDDAPLMERVEYALQTQV 122
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIR 187
P +A GG + DG+ + G C+GC TLK G+ +L F E+ +R
Sbjct: 123 NPQLAGHGGHVSLISISDDGVALVQFGGGCNGCSMVDVTLKEGIEKELLAQFAGELTAVR 182
Query: 188 T 188
Sbjct: 183 D 183
>gi|261409236|ref|YP_003245477.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|315649387|ref|ZP_07902475.1| nitrogen-fixing NifU domain protein [Paenibacillus vortex V453]
gi|329926903|ref|ZP_08281306.1| NifU-like protein [Paenibacillus sp. HGF5]
gi|261285699|gb|ACX67670.1| nitrogen-fixing NifU domain protein [Paenibacillus sp. Y412MC10]
gi|315275163|gb|EFU38533.1| nitrogen-fixing NifU domain protein [Paenibacillus vortex V453]
gi|328938890|gb|EGG35263.1| NifU-like protein [Paenibacillus sp. HGF5]
Length = 81
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + V + EVLD ++RP + RDGGD+ DGIV L + GAC CPS++ TLK G+
Sbjct: 5 TQTTVYDEVAEVLD-KLRPFLQRDGGDVELVDVEDGIVKLKLMGACGSCPSSTITLKAGI 63
Query: 173 ANILNHFVPEVKDIRTV 189
L V ++++ V
Sbjct: 64 ERALVEEVEGIQEVVQV 80
>gi|313902071|ref|ZP_07835484.1| nitrogen-fixing NifU domain protein [Thermaerobacter subterraneus
DSM 13965]
gi|313467680|gb|EFR63181.1| nitrogen-fixing NifU domain protein [Thermaerobacter subterraneus
DSM 13965]
Length = 73
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +++++ L++ +RPA+ DGGDI +G+V + + GAC GCP + TLK G+ I
Sbjct: 1 MREQVEQALES-IRPAIQMDGGDIELVDVDENGVVRVRLIGACVGCPMSIMTLKAGIERI 59
Query: 176 LNHFVPEVKDIRTV 189
L VP V D+ V
Sbjct: 60 LRERVPGVTDVEAV 73
>gi|332798963|ref|YP_004460462.1| nitrogen-fixing NifU domain-containing protein [Tepidanaerobacter
sp. Re1]
gi|332696698|gb|AEE91155.1| nitrogen-fixing NifU domain-containing protein [Tepidanaerobacter
sp. Re1]
Length = 74
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
EV+ N++RP++ DGGD+ + GIV + + GAC GCP A+ TLK G+ L +
Sbjct: 6 EVVLNKIRPSLQADGGDVELVDVDEVAGIVKVRLTGACGGCPFATMTLKNGIEEALKEEI 65
Query: 181 PEVKDIRTV 189
PEVK+++ V
Sbjct: 66 PEVKEVQQV 74
>gi|194319991|pdb|2Z51|A Chain A, Crystal Structure Of Arabidopsis Cnfu Involved In Iron-
Sulfur Cluster Biosynthesis
Length = 154
Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD +RP + DGG++ +V + ++GAC CPS++ T+K G+ L
Sbjct: 5 TEENVESVLDE-IRPYLMSDGGNVALHEIDGNVVRVKLQGACGSCPSSTMTMKMGIERRL 63
Query: 177 NHFVPEVKDIRT 188
+PE+ +
Sbjct: 64 MEKIPEIVAVEA 75
Score = 39.4 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ I++VL+ + G + D IV + + G +G T++ V L
Sbjct: 88 ENIEKVLEEIRPYLIGTADGSLDLVEIEDPIVKIRITGPAAG----VMTVRVAVTQKLRE 143
Query: 179 FVPEVKDIRTV 189
+P + ++ +
Sbjct: 144 KIPSIAAVQLI 154
>gi|254786162|ref|YP_003073591.1| gluconate transport associated thioredoxin-like protein YhgI
[Teredinibacter turnerae T7901]
gi|259511746|sp|C5BJC0|NFUA_TERTT RecName: Full=Fe/S biogenesis protein nfuA
gi|237684627|gb|ACR11891.1| putative gluconate transport associated thioredoxin-like protein
YhgI [Teredinibacter turnerae T7901]
Length = 194
Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 47/133 (35%), Gaps = 10/133 (7%)
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE---------SDSAV 117
+ + + G P + + G DS +
Sbjct: 51 EAEEADHVMELSGFNAYFEDRSVPFLDEAKVDYAPDKMGGQLTIRAPNSKMPKISDDSPI 110
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+I VL N V P +A GG++ + DG+ L G C GC + TLK GV L
Sbjct: 111 EDKINYVLYNEVNPGLASHGGNVSLERLTDDGMAILRFGGGCQGCSAVDMTLKQGVEKTL 170
Query: 177 NHFVPEVKDIRTV 189
+PE+ +R V
Sbjct: 171 MERIPELAGVRDV 183
>gi|71029204|ref|XP_764245.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351199|gb|EAN31962.1| hypothetical protein TP04_0610 [Theileria parva]
Length = 180
Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 102 LDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACS 159
+ + + D V+ IK ++D R+RP + +DGGD+ F Y G V++ + GAC
Sbjct: 76 TKAVIPESYSDEDIETVESIKILIDKRIRPVIQQDGGDVSFVSYDPSTGYVYVRLSGACV 135
Query: 160 GCPSASETLKYGVANILNHFVPEVKDIRTV 189
GC + TLK+ + +L H++ E+ + V
Sbjct: 136 GCIQSDVTLKHMIQGMLCHYLEEITAVYNV 165
>gi|293375093|ref|ZP_06621383.1| NifU-like protein [Turicibacter sanguinis PC909]
gi|325841245|ref|ZP_08167346.1| NifU-like protein [Turicibacter sp. HGF1]
gi|292646287|gb|EFF64307.1| NifU-like protein [Turicibacter sanguinis PC909]
gi|325489926|gb|EGC92273.1| NifU-like protein [Turicibacter sp. HGF1]
Length = 78
Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
++I E+L+ ++RP + RDGGD+ + + DGIV++ M GAC GC S TLK G+ I
Sbjct: 3 ETEKQIVEILE-KLRPYLQRDGGDVEYIKFEDGIVYVRMLGACVGCASMDSTLKDGIEQI 61
Query: 176 LNHFVPEVKDIRTV 189
L VP V + V
Sbjct: 62 LLEEVPGVIGVENV 75
>gi|291279936|ref|YP_003496771.1| nitrogen-fixing NifU domain protein [Deferribacter desulfuricans
SSM1]
gi|290754638|dbj|BAI81015.1| nitrogen-fixing NifU domain protein [Deferribacter desulfuricans
SSM1]
Length = 75
Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +R++EVL N+VRP + DGGD+ DG+V + + GAC CP ++ TLK+G+
Sbjct: 3 LKERVQEVL-NQVRPGLQADGGDVELLDVTEDGVVKVQLTGACGSCPFSTMTLKHGIEMR 61
Query: 176 LNHFVPEVKDIRT 188
L +PEVK++
Sbjct: 62 LKEMIPEVKEVVA 74
>gi|225448154|ref|XP_002264418.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297739542|emb|CBI29724.3| unnamed protein product [Vitis vinifera]
Length = 227
Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD +RP + DGG++ +V L ++GAC CPS+ T+K G+ L
Sbjct: 78 TAENVESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 136
Query: 177 NHFVPEVKDIRTV 189
+PE+ + +
Sbjct: 137 MEKIPEIVAVEPI 149
Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ I++VL+ V GG + G + IV + + G +G T++ V L
Sbjct: 161 ENIEKVLEEIRPYLVGAAGGSLELVGIDEPIVKVRITGPAAG----VMTVRVAVTQKLRE 216
Query: 179 FVPEVKDIR 187
+P + ++
Sbjct: 217 KIPAIAAVQ 225
>gi|289578725|ref|YP_003477352.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter italicus
Ab9]
gi|289528438|gb|ADD02790.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter italicus
Ab9]
Length = 73
Score = 102 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +R++EVL+ +RP++ DGGD+ DGIV + + GAC GCP A+ TLK G+
Sbjct: 1 MRKRVEEVLE-LLRPSLQADGGDVELIDVTEDGIVKIRLTGACGGCPFATLTLKEGIERA 59
Query: 176 LNHFVPEVKDIRTV 189
+ +PEVK++ V
Sbjct: 60 IKEEIPEVKEVIAV 73
>gi|307266231|ref|ZP_07547773.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|326390563|ref|ZP_08212119.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter ethanolicus
JW 200]
gi|306918761|gb|EFN48993.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|325993388|gb|EGD51824.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter ethanolicus
JW 200]
Length = 73
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +R++EVL+ +RP++ DGG++ DGIV + + GAC GCP A+ TLK G+
Sbjct: 1 MRERVEEVLE-LLRPSLQADGGNVELIDVTEDGIVKVRLTGACGGCPFATLTLKEGIERA 59
Query: 176 LNHFVPEVKDIRTV 189
+ +PEV+++ V
Sbjct: 60 IKEEIPEVREVIAV 73
>gi|297544959|ref|YP_003677261.1| nitrogen-fixing NifU domain-containing protein [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296842734|gb|ADH61250.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 73
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +R++EVL+ +RP++ DGGD+ +DGIV + + GAC GCP A+ TLK G+
Sbjct: 1 MRERVEEVLE-LLRPSLQADGGDVELIDVTKDGIVKIRLTGACGGCPFATLTLKEGIERA 59
Query: 176 LNHFVPEVKDIRTV 189
+ +PEVK++ V
Sbjct: 60 IKEEIPEVKEVIAV 73
>gi|322420167|ref|YP_004199390.1| nitrogen-fixing NifU domain-containing protein [Geobacter sp. M18]
gi|320126554|gb|ADW14114.1| nitrogen-fixing NifU domain protein [Geobacter sp. M18]
Length = 73
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ + +K +L+N +RPA+ DGGD+ DG+V + + GAC CP ++ TLK G+
Sbjct: 1 MTEEVKAILEN-IRPALQADGGDVELVEVTDDGVVKVRLVGACGHCPMSTMTLKMGIERT 59
Query: 176 LNHFVPEVKDIRTV 189
+ +P VK++ +V
Sbjct: 60 IKEKIPGVKEVVSV 73
>gi|15642714|ref|NP_232347.1| putative DNA uptake protein [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121586599|ref|ZP_01676384.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121726724|ref|ZP_01679949.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|153212573|ref|ZP_01948320.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|153802209|ref|ZP_01956795.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|153817452|ref|ZP_01970119.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153821287|ref|ZP_01973954.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|153825505|ref|ZP_01978172.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|153828374|ref|ZP_01981041.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|227082834|ref|YP_002811385.1| hypothetical protein VCM66_2640 [Vibrio cholerae M66-2]
gi|229507232|ref|ZP_04396737.1| NfuA Fe-S protein maturation [Vibrio cholerae BX 330286]
gi|229509847|ref|ZP_04399328.1| NfuA Fe-S protein maturation [Vibrio cholerae B33]
gi|229513648|ref|ZP_04403112.1| NfuA Fe-S protein maturation [Vibrio cholerae TMA 21]
gi|229516968|ref|ZP_04406414.1| NfuA Fe-S protein maturation [Vibrio cholerae RC9]
gi|229521794|ref|ZP_04411212.1| NfuA Fe-S protein maturation [Vibrio cholerae TM 11079-80]
gi|229527354|ref|ZP_04416746.1| NfuA Fe-S protein maturation [Vibrio cholerae 12129(1)]
gi|229606738|ref|YP_002877386.1| DNA uptake protein [Vibrio cholerae MJ-1236]
gi|254225442|ref|ZP_04919053.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|254285915|ref|ZP_04960877.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|254851257|ref|ZP_05240607.1| DNA uptake protein [Vibrio cholerae MO10]
gi|255744321|ref|ZP_05418273.1| protein gntY [Vibrio cholera CIRS 101]
gi|261211283|ref|ZP_05925572.1| protein gntY [Vibrio sp. RC341]
gi|262158569|ref|ZP_06029684.1| protein gntY [Vibrio cholerae INDRE 91/1]
gi|262190721|ref|ZP_06048951.1| protein gntY [Vibrio cholerae CT 5369-93]
gi|297581560|ref|ZP_06943483.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|298500465|ref|ZP_07010269.1| IscR-regulated protein YhgI [Vibrio cholerae MAK 757]
gi|51702195|sp|Q9KNL2|NFUA_VIBCH RecName: Full=Fe/S biogenesis protein nfuA
gi|254767333|sp|C3LSE7|NFUA_VIBCM RecName: Full=Fe/S biogenesis protein nfuA
gi|9657318|gb|AAF95860.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549158|gb|EAX59191.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121630885|gb|EAX63267.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|124116444|gb|EAY35264.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124122283|gb|EAY41026.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|125622076|gb|EAZ50399.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|126512038|gb|EAZ74632.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126521219|gb|EAZ78442.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|148876204|gb|EDL74339.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|149740790|gb|EDM54881.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|150424097|gb|EDN16036.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|227010722|gb|ACP06934.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|229334986|gb|EEO00471.1| NfuA Fe-S protein maturation [Vibrio cholerae 12129(1)]
gi|229341388|gb|EEO06392.1| NfuA Fe-S protein maturation [Vibrio cholerae TM 11079-80]
gi|229346031|gb|EEO11003.1| NfuA Fe-S protein maturation [Vibrio cholerae RC9]
gi|229349525|gb|EEO14481.1| NfuA Fe-S protein maturation [Vibrio cholerae TMA 21]
gi|229353321|gb|EEO18260.1| NfuA Fe-S protein maturation [Vibrio cholerae B33]
gi|229354737|gb|EEO19658.1| NfuA Fe-S protein maturation [Vibrio cholerae BX 330286]
gi|229369393|gb|ACQ59816.1| NfuA Fe-S protein maturation [Vibrio cholerae MJ-1236]
gi|254846962|gb|EET25376.1| DNA uptake protein [Vibrio cholerae MO10]
gi|255737846|gb|EET93239.1| protein gntY [Vibrio cholera CIRS 101]
gi|260839784|gb|EEX66395.1| protein gntY [Vibrio sp. RC341]
gi|262029730|gb|EEY48379.1| protein gntY [Vibrio cholerae INDRE 91/1]
gi|262033398|gb|EEY51906.1| protein gntY [Vibrio cholerae CT 5369-93]
gi|297534398|gb|EFH73236.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297540634|gb|EFH76691.1| IscR-regulated protein YhgI [Vibrio cholerae MAK 757]
Length = 195
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 16/181 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F + PG + G + + + P G
Sbjct: 6 TITESAQSHFAKLLAQQPEGTNIRVFVVNPGTQNAECGVSYCPP--EAVEATDTEYPFSG 63
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
P + + D D MGS + D+++++R++ L +V
Sbjct: 64 FSAYVDELSLPFLEEAVI-DFVTDKMGSQLTLKAPNAKMRKVSDDASLMERVEYALQTQV 122
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIR 187
P +A GG + DG+ + G C+GC TLK G+ +L F E+ +R
Sbjct: 123 NPQLAGHGGHVRLISISDDGVALVQFGGGCNGCSMVDVTLKEGIEKELLAQFAGELTAVR 182
Query: 188 T 188
Sbjct: 183 D 183
>gi|197119169|ref|YP_002139596.1| thioredoxin/NifU-like domain-containing protein [Geobacter
bemidjiensis Bem]
gi|197088529|gb|ACH39800.1| thioredoxin/NifU-like domain protein [Geobacter bemidjiensis Bem]
Length = 73
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ + +K +L+ ++RPA+ DGGD+ DGIV + + GAC CP ++ TLK G+
Sbjct: 1 MTEEVKAILE-QIRPALQADGGDVELVEVTDDGIVKVRLVGACGHCPMSTMTLKMGIERT 59
Query: 176 LNHFVPEVKDIRTV 189
+ VP +K++ V
Sbjct: 60 IKEKVPGIKEVVAV 73
>gi|313220324|emb|CBY31180.1| unnamed protein product [Oikopleura dioica]
Length = 95
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILN 177
IKE+LD R+RP V DGGDI F + G++ LS+ GAC+ CPS+ TLK+GV N++
Sbjct: 1 MIKELLDTRIRPTVMEDGGDIAFVSFDPDTGVLQLSLIGACATCPSSVVTLKHGVENMMK 60
Query: 178 HFVPEVKDIRTV 189
++PE+ ++ +
Sbjct: 61 FYIPEITEVEQI 72
>gi|149911004|ref|ZP_01899633.1| Thioredoxin-like protein [Moritella sp. PE36]
gi|149805907|gb|EDM65893.1| Thioredoxin-like protein [Moritella sp. PE36]
Length = 192
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 16/181 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F + PG A+ G + + + + P G
Sbjct: 3 TITEAAQTHFVKLLSNQKDGTNIRVFVVNPGTANAECGVSYCPP--EAIESTDIVLPYSG 60
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
P + + + D D MGS + D+ + +R+ V+ V
Sbjct: 61 FDALIDDMSKPFLTDAYI-DFVTDKMGSQLTLKAPNAKIRAVADDAPLTERVDYVIQTEV 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIR 187
P +A GG++V DGI L G C+GC TLK G+ L P E+ ++
Sbjct: 120 NPQLAGHGGNVVLTEITDDGIAILQFGGGCNGCSQVDFTLKEGIEKQLLELFPEELTAVK 179
Query: 188 T 188
Sbjct: 180 D 180
>gi|70940575|ref|XP_740685.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56518569|emb|CAH83895.1| hypothetical protein PC401665.00.0 [Plasmodium chabaudi chabaudi]
Length = 191
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ---RIKEVLDNRVRPA 132
+ I D I N G L + + + +++ IK +++ RVRP
Sbjct: 66 EINNFIETFQNHSDNSISNEGNILPILQKIKNEPKYNENEEIMEIISSIKLLIEKRVRPI 125
Query: 133 VARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
V DGGDI F + GIV++ ++GAC GC + TL+Y + N+L +++ E+K+I+ +
Sbjct: 126 VVNDGGDIKFVCFDMDSGIVYVQLQGACVGCSQSEVTLQYMIKNMLTYYISEIKEIKNI 184
>gi|147674569|ref|YP_001218208.1| putative DNA uptake protein [Vibrio cholerae O395]
gi|262170037|ref|ZP_06037726.1| NfuA Fe-S protein maturation [Vibrio cholerae RC27]
gi|172047529|sp|A5F4R9|NFUA_VIBC3 RecName: Full=Fe/S biogenesis protein nfuA
gi|146316452|gb|ABQ20991.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227014606|gb|ACP10816.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|262021445|gb|EEY40157.1| NfuA Fe-S protein maturation [Vibrio cholerae RC27]
Length = 195
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 68/182 (37%), Gaps = 18/182 (9%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F + PG + G + + + P G
Sbjct: 6 TITESAQSHFAKLLAQQPEGTNIRVFVVNPGTQNAECGVSYCPP--EAVEATDTEYPFSG 63
Query: 80 MIMEHFISGDPI-IHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNR 128
++ G + + D D MGS + D+++++R++ L +
Sbjct: 64 F--SAYVDGLSLPFLEEAVIDFVTDKMGSQLTLKAPNAKMRKVSDDASLMERVEYALQTQ 121
Query: 129 VRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDI 186
V P +A GG + DG+ + G C+GC TLK G+ +L F E+ +
Sbjct: 122 VNPQLAGHGGHVRLISISDDGVALVQFGGGCNGCSMVDVTLKEGIEKELLAQFAGELTAV 181
Query: 187 RT 188
R
Sbjct: 182 RD 183
>gi|49082646|gb|AAT50723.1| PA1847 [synthetic construct]
Length = 195
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETL 168
+ DS + +RI L + P +A GG + D I L G C GC TL
Sbjct: 103 MVNEDSPITERINYYLQTEINPGLASHGGQVSLVDVVEDNIAVLRFGGGCQGCGMVDMTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K GV L +PE+K +R V
Sbjct: 163 KDGVEKTLIERIPELKGVRDV 183
>gi|209696309|ref|YP_002264240.1| putative DNA uptake protein [Aliivibrio salmonicida LFI1238]
gi|254767289|sp|B6ENV8|NFUA_ALISL RecName: Full=Fe/S biogenesis protein nfuA
gi|208010263|emb|CAQ80595.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
Length = 194
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 67/180 (37%), Gaps = 16/180 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ + R+F + PG + G + + + L+ L
Sbjct: 6 ITESAQEHFAKLLAQQPEGTNIRVFVVNPGTQNAECGVSYCPPEAIEANDTELKFENLSA 65
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
++ P + + + D D MGS + D+ + +R++ + +V
Sbjct: 66 YVDELS--LPFLEDADI-DYVTDKMGSQLTLKAPNAKMRKVNDDAPLFERVEYAIQTQVN 122
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
P +A GG + GI + G C+GC TLK G+ +L F E+ ++
Sbjct: 123 PQLAGHGGHVSLMEITEAGIAIVQFGGGCNGCSMVDVTLKEGIEKELLAQFEGELTAVKD 182
>gi|195941174|ref|ZP_03086556.1| putative DNA uptake protein [Escherichia coli O157:H7 str. EC4024]
Length = 152
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Query: 57 GYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG-------- 108
G + + L+ L ++ + P + + + D D +GS
Sbjct: 1 GVSYCPPDAVEATDTALKFEQLTAYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNA 57
Query: 109 --DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSAS 165
+ D+ +++R++ +L +++ P +A GG + DG+ L G C+GC
Sbjct: 58 KMRKVSDDAPLMERVEYLLQSQINPQLAGHGGRVSLMEITEDGLAILQFGGGCNGCSMVD 117
Query: 166 ETLKYGVANILNHFVPEVKDIRT 188
TLK G+ + + PE+K +R
Sbjct: 118 VTLKEGIEKQMLNEFPELKGVRD 140
>gi|15597044|ref|NP_250538.1| hypothetical protein PA1847 [Pseudomonas aeruginosa PAO1]
gi|107101280|ref|ZP_01365198.1| hypothetical protein PaerPA_01002314 [Pseudomonas aeruginosa PACS2]
gi|116049799|ref|YP_791394.1| hypothetical protein PA14_40630 [Pseudomonas aeruginosa UCBPP-PA14]
gi|152984911|ref|YP_001348805.1| hypothetical protein PSPA7_3445 [Pseudomonas aeruginosa PA7]
gi|218892197|ref|YP_002441064.1| hypothetical protein PLES_34781 [Pseudomonas aeruginosa LESB58]
gi|254234942|ref|ZP_04928265.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254240240|ref|ZP_04933562.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296389760|ref|ZP_06879235.1| hypothetical protein PaerPAb_16491 [Pseudomonas aeruginosa PAb1]
gi|313110548|ref|ZP_07796433.1| hypothetical protein PA39016_002410135 [Pseudomonas aeruginosa
39016]
gi|51702153|sp|Q9I2P8|NFUA_PSEAE RecName: Full=Fe/S biogenesis protein nfuA
gi|122258910|sp|Q02KZ2|NFUA_PSEAB RecName: Full=Fe/S biogenesis protein nfuA
gi|254767309|sp|A6V6X0|NFUA_PSEA7 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767310|sp|B7VB28|NFUA_PSEA8 RecName: Full=Fe/S biogenesis protein nfuA
gi|9947835|gb|AAG05236.1|AE004611_1 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115585020|gb|ABJ11035.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126166873|gb|EAZ52384.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126193618|gb|EAZ57681.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|150960069|gb|ABR82094.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
gi|218772423|emb|CAW28205.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
gi|310882935|gb|EFQ41529.1| hypothetical protein PA39016_002410135 [Pseudomonas aeruginosa
39016]
Length = 194
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETL 168
+ DS + +RI L + P +A GG + D I L G C GC TL
Sbjct: 103 MVNEDSPITERINYYLQTEINPGLASHGGQVSLVDVVEDNIAVLRFGGGCQGCGMVDMTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K GV L +PE+K +R V
Sbjct: 163 KDGVEKTLIERIPELKGVRDV 183
>gi|229524698|ref|ZP_04414103.1| NfuA Fe-S protein maturation [Vibrio cholerae bv. albensis VL426]
gi|229338279|gb|EEO03296.1| NfuA Fe-S protein maturation [Vibrio cholerae bv. albensis VL426]
Length = 195
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 65/181 (35%), Gaps = 16/181 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F + PG + G + + + P G
Sbjct: 6 TITESAQSHFAKLLAQQPEGTNIRVFVVNPGTQNAECGVSYCPP--EAVEATDTEYPFSG 63
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
+ + D D MGS + D+++++R++ L +V
Sbjct: 64 F-SAYVDELSLTFLEEAVIDFVTDKMGSQLTLKAPNAKMRKVSDDASLIERVEYALQTQV 122
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIR 187
P +A GG + DG+ + G C+GC TLK G+ +L F E+ +R
Sbjct: 123 NPQLAGHGGHVRLISISDDGVALVQFGGGCNGCSMVDVTLKEGIEKELLAQFAGELTAVR 182
Query: 188 T 188
Sbjct: 183 D 183
>gi|255637868|gb|ACU19253.1| unknown [Glycine max]
Length = 219
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD +RP + DGG++ +V L ++GAC CPS+ T+K G+ L
Sbjct: 70 TAENVESVLDE-IRPYLIADGGNVALHQIDGNVVRLKLQGACGSCPSSVTTMKMGIERRL 128
Query: 177 NHFVPEVKDIRTV 189
+PE+ + +
Sbjct: 129 MEKIPEIVAVEPI 141
Score = 43.2 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 39/98 (39%), Gaps = 14/98 (14%)
Query: 92 IHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAV--ARDGGDIVFKGYRDGI 149
I + D+ + E + I++VL+ +RP + A D G + + I
Sbjct: 132 IPEIVAVEPIADEETGLELNEDN------IEKVLEE-MRPYLVGAAD-GTLELVAIDEPI 183
Query: 150 VFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
V + + G ++ T++ V L +P + ++
Sbjct: 184 VKVRITGP----AASVLTVRVAVTQKLREKIPAIAAVQ 217
>gi|220931159|ref|YP_002508067.1| nitrogen-fixing NifU domain protein [Halothermothrix orenii H 168]
gi|219992469|gb|ACL69072.1| nitrogen-fixing NifU domain protein [Halothermothrix orenii H 168]
Length = 74
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVAN 174
+ + + +++D ++RP++ DGGD+ D GIV + + GAC GCP ++ T+K G+
Sbjct: 1 MKEEVAKIID-KIRPSLQADGGDVKLVDVDDEKGIVKVKLLGACQGCPMSTMTIKNGIER 59
Query: 175 ILNHFVPEVKDIRTV 189
+L VP VK+++ V
Sbjct: 60 VLKEKVPGVKEVKPV 74
>gi|219120702|ref|XP_002181084.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407800|gb|EEC47736.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 225
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 77 VLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARD 136
+ I+ F S + + G D + ++ VLD +RP + +D
Sbjct: 35 LRDQIVSPFDSSE---RDEGSVATTELDAPPTKLVGPLDLTWDNVEAVLDE-MRPYLIQD 90
Query: 137 GGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
GG+++ +V L ++GAC CPS+++T+K G+ L +PE++++
Sbjct: 91 GGNVIISDIDGPVVKLELQGACGTCPSSTQTMKMGLERGLREKIPEIQEVIQ 142
>gi|253700042|ref|YP_003021231.1| nitrogen-fixing NifU domain protein [Geobacter sp. M21]
gi|251774892|gb|ACT17473.1| nitrogen-fixing NifU domain protein [Geobacter sp. M21]
Length = 73
Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ + +K +L+ ++RPA+ DGGD+ DGIV + + GAC CP ++ TLK G+
Sbjct: 1 MTEEVKAILE-QIRPALQADGGDVELVEVTDDGIVKVRLVGACGHCPMSTMTLKMGIERT 59
Query: 176 LNHFVPEVKDIRTV 189
+ +P +K++ V
Sbjct: 60 IKDKIPGIKEVVAV 73
>gi|317121652|ref|YP_004101655.1| nitrogen-fixing NifU domain protein [Thermaerobacter marianensis
DSM 12885]
gi|315591632|gb|ADU50928.1| nitrogen-fixing NifU domain protein [Thermaerobacter marianensis
DSM 12885]
Length = 73
Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ + +++ L++ +RPA+ DGGDI +G+V + + GAC GCP + TLK G+ I
Sbjct: 1 MRELVEQALES-IRPAIQMDGGDIELVDVDENGVVRVRLIGACVGCPMSIMTLKAGIERI 59
Query: 176 LNHFVPEVKDIRTV 189
L VP V D+ V
Sbjct: 60 LRERVPGVTDVEAV 73
>gi|313673639|ref|YP_004051750.1| nitrogen-fixing nifu domain protein [Calditerrivibrio nitroreducens
DSM 19672]
gi|312940395|gb|ADR19587.1| nitrogen-fixing NifU domain protein [Calditerrivibrio nitroreducens
DSM 19672]
Length = 75
Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +R++EVL +VRPA+ DGGD+ G DG+V + + GAC CP ++ TLK+G+
Sbjct: 3 LKERVEEVL-KKVRPALQADGGDVELLGVTDDGVVKVQLTGACGSCPFSTMTLKHGIEMR 61
Query: 176 LNHFVPEVKDIRT 188
L +PE+K++ +
Sbjct: 62 LKDEIPEIKEVVS 74
>gi|90416073|ref|ZP_01224006.1| yhgI protein [marine gamma proteobacterium HTCC2207]
gi|90332447|gb|EAS47644.1| yhgI protein [marine gamma proteobacterium HTCC2207]
Length = 193
Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 38/77 (49%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
DS + RI +L N + P +A GG + +G L G C GC + S TLK GV
Sbjct: 106 DDSPIEDRINYLLYNEINPGLASHGGVVSLSEMDEGFAVLEFGGGCQGCSAVSMTLKEGV 165
Query: 173 ANILNHFVPEVKDIRTV 189
L +PE+K +R V
Sbjct: 166 EKTLMEKIPELKGVRDV 182
>gi|84997065|ref|XP_953254.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304250|emb|CAI76629.1| hypothetical protein, conserved [Theileria annulata]
Length = 179
Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI 140
I ++++ + + + + + + V+ IK ++D R+RP + +DGGD+
Sbjct: 55 INRNYLTASSLNYPNRSFSTVTKAVVPETYSDEEIETVESIKLLIDKRIRPVIQQDGGDV 114
Query: 141 VFKGYR--DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
F Y G V++ + GAC GC + TLK+ + +L H++ E+ + V
Sbjct: 115 FFVSYDPSTGYVYVRLSGACVGCIQSDITLKHMIQGMLCHYLEEITAVYNV 165
>gi|225848086|ref|YP_002728249.1| hypothetical protein SULAZ_0254 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643275|gb|ACN98325.1| conserved domain protein [Sulfurihydrogenibium azorense Az-Fu1]
Length = 79
Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
Q+++EVL+ +VRP + DGGD+ DG V++ + G+CSGC + TLK GV L
Sbjct: 6 QKVEEVLE-QVRPYLRFDGGDVELVDVSEDGTVYVRLMGSCSGCAMSLWTLKGGVEARLK 64
Query: 178 HFVPEVKDIRTV 189
+PEVK++ V
Sbjct: 65 QAIPEVKEVVAV 76
>gi|226944949|ref|YP_002800022.1| NfuA protein [Azotobacter vinelandii DJ]
gi|259511740|sp|C1DLW0|NFUA_AZOVD RecName: Full=Fe/S biogenesis protein nfuA
gi|226719876|gb|ACO79047.1| NfuA protein [Azotobacter vinelandii DJ]
Length = 194
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETL 168
I+ DS + +RI L + P +A GG + +GI L G C GC TL
Sbjct: 103 MIDEDSPLGERINYYLQTEINPGLASHGGQVSLVDIVEEGIAVLRFGGGCQGCGMVDMTL 162
Query: 169 KYGVANILNHFVPEVKDIRT 188
K GV L +P++K +R
Sbjct: 163 KDGVEKTLLERIPDLKGVRD 182
>gi|20808161|ref|NP_623332.1| thioredoxin domain-containing protein [Thermoanaerobacter
tengcongensis MB4]
gi|20516751|gb|AAM24936.1| Thioredoxin-like proteins and domains [Thermoanaerobacter
tengcongensis MB4]
Length = 73
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +R++E+L N ++P++ DGGD+ DG+V + + GAC GCP A+ TLK G+
Sbjct: 1 MRERVEEIL-NLIKPSLQADGGDVELVDVTEDGVVKVKLTGACGGCPFATLTLKEGIERA 59
Query: 176 LNHFVPEVKDIRTV 189
+ +PEVK++ V
Sbjct: 60 IKEEIPEVKEVIAV 73
>gi|237756555|ref|ZP_04585079.1| putative conserved hypothetical protein [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691283|gb|EEP60367.1| putative conserved hypothetical protein [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 78
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
Q+++EVL+ +VRP + DGGD+ DG V++ + GACSGC + TLK GV L
Sbjct: 6 QKVEEVLE-QVRPYLRFDGGDVELVDVGEDGTVYVRLMGACSGCHMSLWTLKGGVEARLK 64
Query: 178 HFVPEVKDIRTV 189
+PEVK++ V
Sbjct: 65 QAIPEVKEVVAV 76
>gi|298708751|emb|CBJ30713.1| NifU-like protein 2, chloroplast precursor (AtCNfu2) (AtCnfU-V)
[Ectocarpus siliculosus]
Length = 276
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Query: 86 ISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY 145
+S I M D + ++ ++ VLD +RP + DGG++
Sbjct: 92 MSSTDIESPFATPGMADMGDEEEDPEALLTLTLENVETVLDE-MRPYLMSDGGNVRVVEI 150
Query: 146 RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
+V L + GAC CPS++ T+K G+ L +PE+ ++
Sbjct: 151 DGPVVRLELEGACGSCPSSTMTMKMGLERRLVQRIPEISEVVQ 193
>gi|169350337|ref|ZP_02867275.1| hypothetical protein CLOSPI_01098 [Clostridium spiroforme DSM 1552]
gi|169293120|gb|EDS75253.1| hypothetical protein CLOSPI_01098 [Clostridium spiroforme DSM 1552]
Length = 83
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + ++ I++V+ N++RP + RDGGDI ++DGIV++ M GAC+GC ETLK GV
Sbjct: 2 ENMSTIEEIEKVI-NKLRPYLNRDGGDIELVDFKDGIVYVKMLGACAGCAMLDETLKDGV 60
Query: 173 ANILNHFVPEVKDIRTV 189
IL VP V +++ V
Sbjct: 61 EQILMEEVPGVLEVKNV 77
>gi|195952454|ref|YP_002120744.1| nitrogen-fixing NifU domain protein [Hydrogenobaculum sp. Y04AAS1]
gi|195932066|gb|ACG56766.1| nitrogen-fixing NifU domain protein [Hydrogenobaculum sp. Y04AAS1]
Length = 87
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVAN 174
V+ ++E LD +RPA+ DGGDI DG V + + GACSGC ++ TLK GV
Sbjct: 4 PTVEEVEEALDE-IRPALRFDGGDIELVSIEEDGTVLVRLMGACSGCGMSTLTLKAGVER 62
Query: 175 ILNHFVPEVKDIRTV 189
L P++K+++ V
Sbjct: 63 ALKQKFPDIKEVKDV 77
>gi|210630137|ref|ZP_03296252.1| hypothetical protein COLSTE_00136 [Collinsella stercoris DSM 13279]
gi|210160610|gb|EEA91581.1| hypothetical protein COLSTE_00136 [Collinsella stercoris DSM 13279]
Length = 93
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 123 EVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
EVL+ ++RP + DGGD+ + G +G+V L ++GAC+GCP +S TL G+ IL VP
Sbjct: 10 EVLE-QIRPNLQADGGDMAYVGVTDEGVVQLELQGACAGCPMSSLTLSMGIERILKEHVP 68
Query: 182 EVKDIRTV 189
V + V
Sbjct: 69 GVTRVEQV 76
>gi|301168132|emb|CBW27720.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 85
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 45/72 (62%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++++I+ + D +VRPA+A GG++ +G +F+ + G C GC S+S TLK G+ ++
Sbjct: 1 MIRKIENLFDEQVRPALAAHGGNVEVIDIDNGKLFVKLSGGCQGCSSSSATLKDGIERMV 60
Query: 177 NHFVPEVKDIRT 188
PE++++
Sbjct: 61 KQNFPEIEEVVD 72
>gi|159474062|ref|XP_001695148.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
gi|158276082|gb|EDP01856.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
Length = 154
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ +++VLD VRP + DGG++ F +V L ++GAC CPS++ T+ G+ L
Sbjct: 7 ENVEKVLDE-VRPYLMADGGNVEFMEIDGLVVKLKLQGACGSCPSSTTTMTMGIKRRLME 65
Query: 179 FVPEVKDIRTV 189
+PE+ D+ V
Sbjct: 66 RIPEILDVEQV 76
Score = 39.4 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 6/72 (8%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSAS-ETLKYGVANILN 177
++ VL+ V GG + IV + + G P+A+ T++ V L
Sbjct: 88 DNVETVLNEIRPYLVGTGGGGLELVAIDGVIVKVKISG-----PAANVMTVRVAVTQKLR 142
Query: 178 HFVPEVKDIRTV 189
+P + ++ V
Sbjct: 143 EKIPGIAAVQLV 154
>gi|238014236|gb|ACR38153.1| unknown [Zea mays]
Length = 226
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD VRP + DGG++ +V L ++GAC CP++ T+K G+ L
Sbjct: 76 TAENVEMVLDE-VRPYLMADGGNVALHEIDGNVVRLKLQGACGSCPASVTTMKMGIERRL 134
Query: 177 NHFVPEVKDIRTV 189
+PE+ + +
Sbjct: 135 MEKIPEIVAVEPI 147
Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 119 QRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I++VLD +RP +A GG + F + IV + + G +G T++ + L
Sbjct: 159 ENIEKVLDE-IRPYLAGTGGGELEFVTIEEPIVKVRLTGPAAG----VMTVRVALTQKLR 213
Query: 178 HFVPEVKDIR 187
+P++ ++
Sbjct: 214 EKIPKIAAVQ 223
>gi|226495405|ref|NP_001148901.1| NFU3 [Zea mays]
gi|195623070|gb|ACG33365.1| NFU3 [Zea mays]
Length = 226
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD VRP + DGG++ +V L ++GAC CP++ T+K G+ L
Sbjct: 76 TAENVEMVLDE-VRPYLMADGGNVALHEIDGNVVRLKLQGACGSCPASVTTMKMGIERRL 134
Query: 177 NHFVPEVKDIRTV 189
+PE+ + +
Sbjct: 135 MEKIPEIVAVEPI 147
Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 119 QRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I++VLD +RP +A GG + F + IV + + G +G T++ + L
Sbjct: 159 ENIEKVLDE-IRPYLAGTGGGELEFVTIEEPIVKVRLTGPAAG----VMTVRVALTQKLR 213
Query: 178 HFVPEVKDIR 187
+P++ ++
Sbjct: 214 EKIPKIAAVQ 223
>gi|218185367|gb|EEC67794.1| hypothetical protein OsI_35353 [Oryza sativa Indica Group]
Length = 228
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 98 GDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGA 157
+ + + D + ++ VLD VRP + DGG++ +V L ++GA
Sbjct: 59 QQQVVKAIANPDPAVELPLTAENVEIVLDE-VRPYLMADGGNVALHEIDGNVVRLKLQGA 117
Query: 158 CSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
C CP++ T+K G+ L +PE+ + +
Sbjct: 118 CGSCPASVTTMKMGIERRLMEKIPEIVAVEPI 149
Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 119 QRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I++VLD +RP ++ GG + F + IV + + G +G T++ + L
Sbjct: 161 ENIEKVLDE-IRPYLSGTGGGELEFVAIEEPIVKVRLTGPAAG----VMTVRVALTQKLR 215
Query: 178 HFVPEVKDIR 187
+P++ ++
Sbjct: 216 EKIPKIAAVQ 225
>gi|115484477|ref|NP_001065900.1| Os11g0181500 [Oryza sativa Japonica Group]
gi|108864066|gb|ABG22389.1| nitrogen fixation protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113644604|dbj|BAF27745.1| Os11g0181500 [Oryza sativa Japonica Group]
gi|215695304|dbj|BAG90495.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765607|dbj|BAG87304.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615626|gb|EEE51758.1| hypothetical protein OsJ_33192 [Oryza sativa Japonica Group]
Length = 228
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 98 GDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGA 157
+ + + D + ++ VLD VRP + DGG++ +V L ++GA
Sbjct: 59 QQQVVKAIANPDPAVELPLTAENVEIVLDE-VRPYLMADGGNVALHEIDGNVVRLKLQGA 117
Query: 158 CSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
C CP++ T+K G+ L +PE+ + +
Sbjct: 118 CGSCPASVTTMKMGIERRLMEKIPEIVAVEPI 149
Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 119 QRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I++VLD +RP ++ GG + F + IV + + G +G T++ + L
Sbjct: 161 ENIEKVLDE-IRPYLSGTGGGELEFVAIEEPIVKVRLTGPAAG----VMTVRVALTQKLR 215
Query: 178 HFVPEVKDIR 187
+P++ ++
Sbjct: 216 EKIPKIAAVQ 225
>gi|156081764|ref|XP_001608375.1| hypothetical protein [Plasmodium vivax SaI-1]
gi|148800946|gb|EDL42351.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 191
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 76 PVLGMIMEHFISGDPIIHNGG---LGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPA 132
+ I + D +G K+ + + E ++ IK +++ RVRP
Sbjct: 66 EINNFIDAFQKNSDDSSSSGENILSILQKIKNEKKYEQNEDLMEIISSIKLLIEKRVRPV 125
Query: 133 VARDGGDIVFK--GYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+ DGGDI F DGIV++ + GAC C + TL+Y + N+L +++ E+K+I+ V
Sbjct: 126 IVNDGGDIKFICFDIDDGIVYVQLEGACVTCSQSEITLQYMIKNMLTYYISEIKEIKNV 184
>gi|224126131|ref|XP_002329668.1| predicted protein [Populus trichocarpa]
gi|222870549|gb|EEF07680.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ +++VLD VRP + RDGG++ +V L ++GAC CPS+S TLK G+ L
Sbjct: 8 TEENVEKVLDE-VRPGLMRDGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIETKL 66
Query: 177 NHFVPEVKDIRTV 189
+PE+ D+ +
Sbjct: 67 RDKIPEIMDVEQI 79
Score = 39.0 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Query: 100 MKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGAC 158
++ D+ E+ + + E +RP +A GG + D +V + + G
Sbjct: 71 PEIMDVEQIMDTETGLELNEENVEKALAEIRPYLAGTGGGVLELVQINDYVVKVRLSGPA 130
Query: 159 SGCPSASETLKYGVANILNHFVP 181
+G T++ + L +P
Sbjct: 131 AG----VMTVRVALTQKLRETIP 149
>gi|168012112|ref|XP_001758746.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689883|gb|EDQ76252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 153
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ + E++ + VRP + DGG++ +V L ++GAC CPS++ T++ G+
Sbjct: 2 ELTEENVELVLDEVRPYLISDGGNVALHEIDGLVVKLKLQGACGSCPSSTMTMRMGIERR 61
Query: 176 LNHFVPEVKDIRTV 189
L +PE+ + +
Sbjct: 62 LIERIPEIVAVEQI 75
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 34/89 (38%), Gaps = 5/89 (5%)
Query: 100 MKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGAC 158
++ + E+ A+ + E + +RP + GG + +V + + G
Sbjct: 67 PEIVAVEQIMDEETGLALTEENVEAVLGEIRPYLVGTGGGELELVKIDGPVVKVRLGGP- 125
Query: 159 SGCPSASETLKYGVANILNHFVPEVKDIR 187
++ T++ V L +P + ++
Sbjct: 126 ---AASVMTVRVAVTQKLREKIPMIAAVQ 151
>gi|110738975|dbj|BAF01408.1| nitrogen fixation like protein [Arabidopsis thaliana]
gi|227206276|dbj|BAH57193.1| AT4G25910 [Arabidopsis thaliana]
Length = 155
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD VRP++ DGG++ +V L ++GAC CPS+S TLK G+ + L
Sbjct: 4 TEENVERVLDE-VRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRL 62
Query: 177 NHFVPEVKDIRT 188
+PE+ +
Sbjct: 63 RDKIPEIMSVEQ 74
Score = 40.9 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 119 QRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I++VL + +RP ++ GG + +V + + G +G T++ + L
Sbjct: 88 ENIEKVL-SELRPYLSGTGGGGLELVEIDGYVVKVRLTGPAAG----VMTVRVALTQKLR 142
Query: 178 HFVPEVKDIR 187
+P + ++
Sbjct: 143 ETIPSIGAVQ 152
>gi|218886099|ref|YP_002435420.1| nitrogen-fixing NifU domain protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757053|gb|ACL07952.1| nitrogen-fixing NifU domain protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 77
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVA 173
A+ +R++ LD +VRP + DGGD+ DG+V + + GAC GCP + +TLK GV
Sbjct: 3 DAIHERVQAALD-KVRPYLQGDGGDVELVEITADGVVRVRLTGACKGCPMSQQTLKGGVE 61
Query: 174 NILNHFVPEVKDIRTV 189
++ V EVK + V
Sbjct: 62 RMVLKEVAEVKRVEAV 77
>gi|312144147|ref|YP_003995593.1| nitrogen-fixing NifU domain protein [Halanaerobium sp.
'sapolanicus']
gi|311904798|gb|ADQ15239.1| nitrogen-fixing NifU domain protein [Halanaerobium sp.
'sapolanicus']
Length = 73
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ + +++ LD ++RP++ DGGD+ +GIV + + GACSGCP ++ T+K G+
Sbjct: 1 MKEEVQKYLD-KIRPSLQADGGDVELVEVTEEGIVKVKLLGACSGCPMSTLTIKNGIERT 59
Query: 176 LNHFVPEVKDIRTV 189
L V VK+++ V
Sbjct: 60 LKQNVDGVKEVQPV 73
>gi|302389972|ref|YP_003825793.1| nitrogen-fixing NifU domain protein [Thermosediminibacter oceani
DSM 16646]
gi|302200600|gb|ADL08170.1| nitrogen-fixing NifU domain protein [Thermosediminibacter oceani
DSM 16646]
Length = 74
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVAN 174
+ ++++EVL N++RP++ DGGD+ + GIV + + G+C GCP ++ TLK G+
Sbjct: 1 MKEKVQEVL-NKIRPSLQADGGDVELVDVDEEKGIVKVRLTGSCFGCPFSTLTLKNGIEQ 59
Query: 175 ILNHFVPEVKDIRTV 189
+L VP VK++++V
Sbjct: 60 VLKEEVPGVKEVQSV 74
>gi|167756739|ref|ZP_02428866.1| hypothetical protein CLORAM_02286 [Clostridium ramosum DSM 1402]
gi|167702914|gb|EDS17493.1| hypothetical protein CLORAM_02286 [Clostridium ramosum DSM 1402]
Length = 83
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+++ ++ +++V+ N++RP + RDGGDI ++DGIV++ M GAC+GC ETLK GV
Sbjct: 2 ENTSTIEEVEKVI-NKLRPYLNRDGGDIELIDFKDGIVYVKMLGACAGCSMLDETLKDGV 60
Query: 173 ANILNHFVPEVKDIRTV 189
IL VP V ++ +
Sbjct: 61 EQILMEEVPGVLGVQNI 77
>gi|118578775|ref|YP_900025.1| NifU domain-containing protein [Pelobacter propionicus DSM 2379]
gi|118501485|gb|ABK97967.1| nitrogen-fixing NifU domain protein [Pelobacter propionicus DSM
2379]
Length = 74
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANI 175
+ + + VL +VRPA+ DGGD+ DGIV + ++GAC CP ++ TLK G+
Sbjct: 1 MKEDVLRVL-GQVRPALQADGGDVELVEVTADGIVKVRLKGACGSCPMSTMTLKMGIERA 59
Query: 176 LNHFVPEVKDIRTV 189
+ +P VK++ V
Sbjct: 60 MKEQIPAVKEVVQV 73
>gi|224129660|ref|XP_002328771.1| predicted protein [Populus trichocarpa]
gi|222839069|gb|EEE77420.1| predicted protein [Populus trichocarpa]
Length = 234
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++ VLD VRP + DGG++ +V L ++GACS C ++ T+K G+ L
Sbjct: 85 TADNVESVLDE-VRPYLISDGGNVALHEIDGNVVRLKLQGACSSCSASVTTMKMGIERRL 143
Query: 177 NHFVPEVKDIRTV 189
+PE+ + +
Sbjct: 144 MEKIPEIVAVEAI 156
Score = 44.8 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ I++VL+ V GG + + IV + + G +G T++ V L
Sbjct: 168 ENIEKVLEEIRPYLVGAAGGSLELVAIEEPIVKIRITGPAAG----VMTVRVAVTQKLRE 223
Query: 179 FVPEVKDIR 187
+P + ++
Sbjct: 224 KIPAIAAVQ 232
>gi|224126127|ref|XP_002329667.1| predicted protein [Populus trichocarpa]
gi|222870548|gb|EEF07679.1| predicted protein [Populus trichocarpa]
Length = 167
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ +++VLD VRP + RDGG++ +V L ++GAC CPS+S TLK G+ L
Sbjct: 17 TEENVEKVLDE-VRPGLMRDGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIETKL 75
Query: 177 NHFVPEVKDIRTV 189
+PE+ D+ +
Sbjct: 76 RDKIPEIMDVEQI 88
Score = 43.2 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 100 MKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGAC 158
++ D+ E+ + + E +RP +A GG + D +V + + G
Sbjct: 80 PEIMDVEQIMDTETGLELNEENVEKALAEIRPYLAGTGGGVLELVQINDYVVKVRLSGPA 139
Query: 159 SGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+G T++ + L +P + ++ +
Sbjct: 140 AG----VMTVRVALTQKLRETIPAIAAVQLI 166
>gi|221054900|ref|XP_002258589.1| NifU-like protein [Plasmodium knowlesi strain H]
gi|193808658|emb|CAQ39361.1| NifU-like protein, putative [Plasmodium knowlesi strain H]
Length = 191
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 76 PVLGMIMEHFISGDPIIHNGG---LGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPA 132
+ I + D +G K+ + + E ++ IK +++ RVRP
Sbjct: 66 EINNFIDTFEKNSDDSSSSGENILSILQKIKNEKKYEQNEDLMEIISSIKLLIEKRVRPV 125
Query: 133 VARDGGDIVFK--GYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+ DGGDI F DGIV++ + GAC C + TL+Y + N+L +++ E+K+I+ V
Sbjct: 126 IVNDGGDIKFICFDVDDGIVYVQLEGACVTCSQSEITLQYMIKNMLTYYISEIKEIKNV 184
>gi|188996345|ref|YP_001930596.1| nitrogen-fixing NifU domain protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931412|gb|ACD66042.1| nitrogen-fixing NifU domain protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 79
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
Q+++EVL+ +VRP + DGGD+ DG V++ + GACSGC + TLK GV L
Sbjct: 6 QKVEEVLE-QVRPYLRFDGGDVELVDVGEDGTVYVRLMGACSGCHMSLWTLKGGVETRLK 64
Query: 178 HFVPEVKDIRTV 189
+PEVK++ +
Sbjct: 65 QAIPEVKEVVAI 76
>gi|23099811|ref|NP_693277.1| nitrogen fixation protein [Oceanobacillus iheyensis HTE831]
gi|22778042|dbj|BAC14312.1| nitrogen fixation protein (NifU protein) [Oceanobacillus iheyensis
HTE831]
Length = 74
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ ++++EVL N++RP + RDGGD+ +G+V L + GAC CPS++ TLK G+
Sbjct: 1 MQEQVQEVL-NKLRPFLLRDGGDVELIDVDEEGVVLLRLMGACGNCPSSTITLKAGIERA 59
Query: 176 LNHFVPEVKDIRTV 189
L VP V++I V
Sbjct: 60 LMAEVPGVREIEQV 73
>gi|116748860|ref|YP_845547.1| NifU domain-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116697924|gb|ABK17112.1| nitrogen-fixing NifU domain protein [Syntrophobacter fumaroxidans
MPOB]
Length = 72
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++++E L ++RP + RDGG + + +V + + GAC GCP + TLK G+ ++
Sbjct: 1 MRKKVEEAL-AKIRPMLERDGGSVELVDVQGTVVKVRLTGACHGCPMSQMTLKAGIERVV 59
Query: 177 NHFVPEVKDIRTV 189
VPEV ++++V
Sbjct: 60 KENVPEVTEVQSV 72
>gi|326487760|dbj|BAK05552.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 99.9 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
DS++ E++ ++VRP + DGG++ +V L ++GAC CP + T++ G+
Sbjct: 65 DSSLTAENVELVLDQVRPYLMADGGNVALHEIDGNVVRLKLQGACGACPGSVMTMRMGIQ 124
Query: 174 NILNHFVPEVKDIRTV 189
L +PE+ + +
Sbjct: 125 RRLMDEIPEIAAVEAI 140
Score = 41.3 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE-TLKYGVANILN 177
+ +++VLD GG++ F V + +RG P+A ++ VA L
Sbjct: 152 ENVEKVLDEIRPYLTGAGGGNLRFVAINRFFVKVQLRG-----PAAGVAAIRVAVAQKLR 206
Query: 178 HFVPEVKDIR 187
+P + ++
Sbjct: 207 EKIPSISAVQ 216
>gi|158520102|ref|YP_001527972.1| NifU domain-containing protein [Desulfococcus oleovorans Hxd3]
gi|158508928|gb|ABW65895.1| nitrogen-fixing NifU domain protein [Desulfococcus oleovorans Hxd3]
Length = 72
Score = 99.9 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ +++K LD ++RP + DGGD+ +G V + ++GAC+GCP + TLK + L
Sbjct: 1 MKEQVKAALD-KIRPQLQADGGDVELVDVENGNVSVRLKGACAGCPMSQITLKQRIEAYL 59
Query: 177 NHFVPEVKDIRTV 189
VP V ++ V
Sbjct: 60 KKTVPGVINVEKV 72
>gi|168037489|ref|XP_001771236.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677477|gb|EDQ63947.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 165
Score = 99.9 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ V+ + +VLD VRP + DGG++ +DG+V L ++GAC CPS++ T+K G
Sbjct: 18 ETYEFTVENVDKVLDE-VRPYLIADGGNVEVVAVKDGVVSLRLQGACGTCPSSTSTMKMG 76
Query: 172 VANILNHFVPEV-KDIRTV 189
+ +L +V K++ V
Sbjct: 77 IERVLMEKFGDVLKEVVQV 95
>gi|242082972|ref|XP_002441911.1| hypothetical protein SORBIDRAFT_08g004740 [Sorghum bicolor]
gi|241942604|gb|EES15749.1| hypothetical protein SORBIDRAFT_08g004740 [Sorghum bicolor]
Length = 227
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++ VLD VRP + DGGD+ +V L ++GAC CPS+ T+K + L
Sbjct: 77 TTGNVESVLDE-VRPYLIADGGDVALHEINGNVVRLKLQGACGSCPSSVTTMKMRIQRRL 135
Query: 177 NHFVPEVKDIRTV 189
+PE+ + V
Sbjct: 136 MENIPEISAVERV 148
Score = 37.9 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 119 QRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++VL +RP +A GG + +V + + G +G +T++ + L
Sbjct: 160 ANVQKVLAE-IRPYLAGKGGGELELIKIVGHVVKVRLTGRAAG----VKTVRVALTQKLR 214
Query: 178 HFVPEVKDIR 187
+P + IR
Sbjct: 215 EKIPSIAAIR 224
>gi|78189610|ref|YP_379948.1| NifU protein, putative [Chlorobium chlorochromatii CaD3]
gi|78171809|gb|ABB28905.1| NifU protein, putative [Chlorobium chlorochromatii CaD3]
Length = 84
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSAS 165
S D++ S ++ R+ L+ VRP + DGGD G +D +V + + GAC CP ++
Sbjct: 2 SKDYLPSSDSLYDRVIAALET-VRPYLQADGGDCQLVGISKDMVVDVKLLGACGSCPMST 60
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TL+ GV + +PE+ + +V
Sbjct: 61 LTLRAGVEQAIKKAIPEIVRVESV 84
>gi|311694682|gb|ADP97555.1| yhgI protein [marine bacterium HP15]
Length = 195
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 61/161 (37%), Gaps = 13/161 (8%)
Query: 40 PLASRIFS-IPGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLG 98
+ RIF PG + + + E + + ++H + P + +
Sbjct: 25 GMGVRIFVTQPGTKNAETCLAYCPPNEVVPTDEQVDLDKFVLYLDH--NSVPFLEEAYVD 82
Query: 99 DMKLDDMGSGDFI---------ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDG 148
K G + D+ + R+ +L + + P +A GG++ +
Sbjct: 83 YSKDQMGGQLTIKAPNAKVPKIDDDAPLPDRVNYILASEINPNLAAHGGEVSLVEIVDES 142
Query: 149 IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+ L G C GC + S TLK GV + L VPE+ +R V
Sbjct: 143 VAVLRFGGGCQGCSAVSLTLKQGVESTLKERVPEITAVRDV 183
>gi|268317872|ref|YP_003291591.1| nitrogen-fixing NifU domain-containing protein [Rhodothermus
marinus DSM 4252]
gi|262335406|gb|ACY49203.1| nitrogen-fixing NifU domain protein [Rhodothermus marinus DSM 4252]
Length = 96
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 103 DDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGC 161
+G D + +RI+E LD +RP + DGG + D +V L + GAC C
Sbjct: 6 TTHTTGPLAPDDPELHRRIEEALD-MIRPYLMTDGGSVRLLNVTEDYVVELELLGACGTC 64
Query: 162 PSASETLKYGVANILNHFVPEVKDIRTV 189
P + TL+ G+ +L VPE+ + V
Sbjct: 65 PMSLMTLRAGIEQVLKRAVPEITRVEAV 92
>gi|145351003|ref|XP_001419878.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580111|gb|ABO98171.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 213
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 101 KLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSG 160
+ G ++ I+ VLD VRP + DGGD+ V L ++GAC
Sbjct: 47 EARAASEGSLTDTLELTADNIESVLDE-VRPYLIADGGDVELVEIDGLSVKLKLKGACGS 105
Query: 161 CPSASETLKYGVANILNHFVPEVKDIRTV 189
CPS++ T++ G+ L +P++ ++ V
Sbjct: 106 CPSSTVTMRMGIEKRLLEKIPDIMEVIQV 134
Score = 48.3 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 103 DDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGC 161
+ + + +E + ++ LD +RP +A GG + + IV + + G
Sbjct: 130 EVIQVEEKLEGLDLNEENVEATLDE-IRPYLAGTGGGELELIDIEEPIVKVRLTG----- 183
Query: 162 PSAS-ETLKYGVANILNHFVPEVKDIR 187
P+A T++ V L +P + ++
Sbjct: 184 PAAKVMTVRVAVTQKLREKIPSIAAVQ 210
>gi|326530153|dbj|BAK08356.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 227
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD VRP + DGG++V +V L ++GAC CP++ T+K G+ L
Sbjct: 77 TAENVELVLDE-VRPYLMADGGNVVLHEIDGNVVRLKLQGACGSCPASVTTMKMGIERRL 135
Query: 177 NHFVPEVKDIRTV 189
+PE+ + +
Sbjct: 136 MEKIPEIVAVEPI 148
Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 119 QRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I++VLD +RP ++ GG + F + IV + + G +G T++ + L
Sbjct: 160 ENIEKVLDE-IRPYLSGTGGGELEFVSIEEPIVKVRLTGPAAG----VMTVRVALTQKLR 214
Query: 178 HFVPEVKDIR 187
+P++ ++
Sbjct: 215 EKIPKIAAVQ 224
>gi|218192692|gb|EEC75119.1| hypothetical protein OsI_11301 [Oryza sativa Indica Group]
Length = 288
Score = 99.9 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 56/134 (41%), Gaps = 18/134 (13%)
Query: 73 LRPPVLGMIMEH--------FISGDPIIHNGGLGDMKLDDMGSGDFI--------ESDSA 116
LRP + I + SG I G S E+
Sbjct: 17 LRPQIRLRITQATPLMPPRRLQSGPSKIQTSGARAHLAAAPASTPPAAGGGLYSAETYEL 76
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ + VLD+ VRP + DGGD+ DG++ L + GAC CPS++ T+K G+ +L
Sbjct: 77 TAENVDRVLDD-VRPYLIADGGDVTVASVEDGVISLKLEGACGSCPSSTTTMKMGIERVL 135
Query: 177 NHFVPE-VKDIRTV 189
+ VKDIR V
Sbjct: 136 KEKFGDAVKDIRQV 149
>gi|218778425|ref|YP_002429743.1| nitrogen-fixing NifU domain protein [Desulfatibacillum alkenivorans
AK-01]
gi|218759809|gb|ACL02275.1| nitrogen-fixing NifU domain protein [Desulfatibacillum alkenivorans
AK-01]
Length = 74
Score = 99.5 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +++K +D +RP + RDGGD+ DG+V + + GAC GCP + +TLK G+
Sbjct: 1 MKEQVKAAIDE-IRPTLQRDGGDVELVEVGDDGVVKVRLVGACKGCPMSQQTLKNGIEKY 59
Query: 176 LNHFVPEVKDIRTV 189
+ +P VK + V
Sbjct: 60 MKKNIPGVKSVEGV 73
>gi|83816071|ref|YP_445990.1| hypothetical protein SRU_1878 [Salinibacter ruber DSM 13855]
gi|294507901|ref|YP_003571959.1| conserved hypothetical protein containing thioredoxin-like domain
[Salinibacter ruber M8]
gi|83757465|gb|ABC45578.1| conserved hypothetical protein [Salinibacter ruber DSM 13855]
gi|294344229|emb|CBH25007.1| conserved hypothetical protein containing thioredoxin-like domain
[Salinibacter ruber M8]
Length = 142
Score = 99.5 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 4 QTEDTPNPATLKFIPGQ-VVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
Q E TPNP +LKF L G +S+A EA PLA R+F + G+ V+ F+T
Sbjct: 56 QAESTPNPNSLKFTTDDGPFLSGGVAAYSSADEAAEDPLARRLFGVSGVDDVFITPQFVT 115
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFIS 87
V K DW ++P V ++ EH +
Sbjct: 116 VSKAPSVDWGSVKPDVETILAEHLEA 141
>gi|193215039|ref|YP_001996238.1| nitrogen-fixing NifU domain-containing protein [Chloroherpeton
thalassium ATCC 35110]
gi|193088516|gb|ACF13791.1| nitrogen-fixing NifU domain protein [Chloroherpeton thalassium ATCC
35110]
Length = 95
Score = 99.5 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 98 GDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRG 156
+ + + ++ + + R+ E L N +RP + DGGD G + +V L + G
Sbjct: 3 AKNEGNPVQDKQYLPGNDPIYARVTEAL-NSIRPYLQADGGDCELVGITDEQVVDLRLVG 61
Query: 157 ACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
AC CP ++ TL+ GV + VPE+ +
Sbjct: 62 ACGSCPMSAMTLRAGVEQAIKRAVPEIVRVEA 93
>gi|213865552|ref|ZP_03387671.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 169
Score = 99.5 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 64/170 (37%), Gaps = 15/170 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ +L
Sbjct: 3 RISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDLLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ L +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYALQSQI 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
P +A GG + +G L G C+GC TLK G+ +
Sbjct: 120 NPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLKEGIRETVAE 169
>gi|226225813|ref|YP_002759919.1| hypothetical protein GAU_0407 [Gemmatimonas aurantiaca T-27]
gi|226089004|dbj|BAH37449.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 296
Score = 99.5 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ + R+ V++N +RP GGD+ VF+ + G+C+GC +S TL+ G+
Sbjct: 100 ADMRTRVARVVEN-LRPYTQSHGGDVTLVDVTSDTVFVKLSGSCNGCSMSSVTLRNGIEE 158
Query: 175 ILNHFVPEVKDIRTV 189
L VPE+ I V
Sbjct: 159 ALKEQVPEITRIEVV 173
>gi|326526691|dbj|BAK00734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 99.5 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD VRP + DGG++V +V L ++GAC CP++ T+K G+ L
Sbjct: 75 TAENVELVLDE-VRPYLMADGGNVVLHEIDGNVVRLKLQGACGSCPASVTTMKMGIERRL 133
Query: 177 NHFVPEVKDIRTV 189
+PE+ + +
Sbjct: 134 MEKIPEIVAVEPI 146
Score = 45.6 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 119 QRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I++VLD +RP ++ GG + F + IV + + G +G T++ + L
Sbjct: 158 ENIEKVLDE-IRPYLSGTGGGELEFVSIEEPIVKVRLTGPAAG----VMTVRVALTQKLR 212
Query: 178 HFVPEVKDIR 187
+P++ ++
Sbjct: 213 EKIPKIAAVQ 222
>gi|222624810|gb|EEE58942.1| hypothetical protein OsJ_10617 [Oryza sativa Japonica Group]
Length = 224
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 56/134 (41%), Gaps = 18/134 (13%)
Query: 73 LRPPVLGMIMEH--------FISGDPIIHNGGLGDMKLDDMGSGDFI--------ESDSA 116
LRP + I + SG I G S E+
Sbjct: 17 LRPQIRLRITQATPLMPPRRLQSGPSKIQTSGARAHLAAAPASTPPAAGGGLYSAETYEL 76
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ + VLD+ VRP + DGGD+ DG++ L + GAC CPS++ T+K G+ +L
Sbjct: 77 TAENVDRVLDD-VRPYLIADGGDVTVASVEDGVISLKLEGACGSCPSSTTTMKMGIERVL 135
Query: 177 NHFVPE-VKDIRTV 189
+ VKDIR V
Sbjct: 136 KEKFGDAVKDIRQV 149
Score = 35.5 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 9/72 (12%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
Q + LD +RPA+A GG + + G P + G+
Sbjct: 158 EPTPQAVNGHLDI-LRPAIANYGGSVEVVAVDGEDCLVRYEG-----PESIG---SGIKA 208
Query: 175 ILNHFVPEVKDI 186
+ P++ ++
Sbjct: 209 AIKEKFPDITNV 220
>gi|323704659|ref|ZP_08116237.1| nitrogen-fixing NifU domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323536121|gb|EGB25894.1| nitrogen-fixing NifU domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 73
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +R++EVL +RP++ DGGD+ DG+V + + GAC GCP A TLK G+
Sbjct: 1 MRERVEEVL-KLLRPSLQADGGDVELVDVTDDGVVQVRLTGACGGCPFAVMTLKEGIERA 59
Query: 176 LNHFVPEVKDIRT 188
+ +PEVK++
Sbjct: 60 IKEEIPEVKEVVA 72
>gi|302340763|ref|YP_003805969.1| nitrogen-fixing NifU domain protein [Spirochaeta smaragdinae DSM
11293]
gi|301637948|gb|ADK83375.1| nitrogen-fixing NifU domain protein [Spirochaeta smaragdinae DSM
11293]
Length = 77
Score = 99.1 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ ++K+ + + +RP++ DGGDI +G V + + GAC+GCP A TLK GV
Sbjct: 4 ELEGKVKKAIQD-IRPSLQADGGDIELVTVGENGKVSVRLTGACNGCPMAQITLKQGVER 62
Query: 175 ILNHFVPEVKDIRTV 189
L +PE+K + V
Sbjct: 63 YLKETIPEIKSVDAV 77
>gi|194334614|ref|YP_002016474.1| nitrogen-fixing NifU domain-containing protein [Prosthecochloris
aestuarii DSM 271]
gi|194312432|gb|ACF46827.1| nitrogen-fixing NifU domain protein [Prosthecochloris aestuarii DSM
271]
Length = 86
Score = 99.1 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 106 GSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSA 164
S ++ + R+ L++ VRP + DGGD G +D +V + + GAC CP +
Sbjct: 3 TSKQYLPDTDPLYDRVINALED-VRPYLQADGGDCQLVGITKDMVVDVKLLGACGSCPMS 61
Query: 165 SETLKYGVANILNHFVPEVKDIRTV 189
+ TL+ GV + +PEV + +V
Sbjct: 62 TLTLRAGVEQAVKKAIPEVARVESV 86
>gi|296449646|ref|ZP_06891419.1| NifU family protein [Clostridium difficile NAP08]
gi|296878033|ref|ZP_06902051.1| NifU family protein [Clostridium difficile NAP07]
gi|296261502|gb|EFH08324.1| NifU family protein [Clostridium difficile NAP08]
gi|296430988|gb|EFH16817.1| NifU family protein [Clostridium difficile NAP07]
Length = 95
Score = 99.1 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN 174
A+ +++++VL+ +++P + RDGGD+ +G+V + ++GACSGCP A+ T+K + N
Sbjct: 21 AMREKVEKVLEEKIKPVLQRDGGDVELIDVNENGVVLVRLQGACSGCPGATMTIKAIIEN 80
Query: 175 ILNHFVPEVKDIRTV 189
+L VP V + V
Sbjct: 81 VLVSEVPGVTQVLGV 95
>gi|239828215|ref|YP_002950839.1| nitrogen-fixing NifU domain protein [Geobacillus sp. WCH70]
gi|239808508|gb|ACS25573.1| nitrogen-fixing NifU domain protein [Geobacillus sp. WCH70]
Length = 78
Score = 99.1 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+D + ++++EVLD ++RP + RDGGD DG+V L + GAC CPS++ TLK G+
Sbjct: 2 TDQEIKEQVQEVLD-KLRPFLLRDGGDCELIDVEDGVVKLRLLGACGSCPSSTITLKAGI 60
Query: 173 ANIL 176
L
Sbjct: 61 ERAL 64
>gi|296005287|ref|XP_002808974.1| NifU-like protein, putative [Plasmodium falciparum 3D7]
gi|225631861|emb|CAX64255.1| NifU-like protein, putative [Plasmodium falciparum 3D7]
Length = 192
Score = 98.7 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 24/185 (12%)
Query: 28 IHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT-------VGKDQYD---WEHLRP-- 75
IHF NA S R F +V F ++IT V K + + +
Sbjct: 2 IHFKNAFSYRHSLCMMRTFHFNIYKNVKF-SNYITKALNKYIVTKQSTNQRFFSIINNSD 60
Query: 76 ------PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ---RIKEVLD 126
+ I + D N L+ + + + + +++ IK +++
Sbjct: 61 YINYINEINKFIDIFEKNVDNKSTNEDHIIPVLEKIKNEKIYKDNEDIMEIISSIKLLIE 120
Query: 127 NRVRPAVARDGGDIVFK--GYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVK 184
RVRP + DGGDI F GIV++ + GAC C + TL+Y + N+L +++ E+K
Sbjct: 121 KRVRPIILNDGGDIKFICFDVDKGIVYVQLEGACVTCAQSEVTLQYMIKNMLTYYISEIK 180
Query: 185 DIRTV 189
+I+ V
Sbjct: 181 EIKNV 185
>gi|78186286|ref|YP_374329.1| NifU protein, putative [Chlorobium luteolum DSM 273]
gi|78166188|gb|ABB23286.1| NifU protein, putative [Chlorobium luteolum DSM 273]
Length = 89
Score = 98.7 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 106 GSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSA 164
S D++ + A+ R+ L+ VRP + DGGD G +D +V + + GAC CP +
Sbjct: 6 TSKDYLPNSDALYDRVIAALET-VRPYLQVDGGDCQLVGITKDMVVDVKLLGACGSCPMS 64
Query: 165 SETLKYGVANILNHFVPEVKDIRTV 189
+ TL+ GV + +PE+ + +V
Sbjct: 65 TLTLRAGVEQAIKKAIPEIVRVESV 89
>gi|212640233|ref|YP_002316753.1| thioredoxin-like protein [Anoxybacillus flavithermus WK1]
gi|212561713|gb|ACJ34768.1| Thioredoxin-like protein [Anoxybacillus flavithermus WK1]
Length = 80
Score = 98.7 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+D + Q+++EVLD ++RP + RDGGD DG+V L + GAC CPS++ TLK G+
Sbjct: 4 ADQDIKQQVQEVLD-KLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGI 62
Query: 173 ANIL 176
L
Sbjct: 63 ERAL 66
>gi|83815451|ref|YP_444955.1| hypothetical protein SRU_0820 [Salinibacter ruber DSM 13855]
gi|294506813|ref|YP_003570871.1| hypothetical protein SRM_00998 [Salinibacter ruber M8]
gi|83756845|gb|ABC44958.1| conserved domain protein [Salinibacter ruber DSM 13855]
gi|294343141|emb|CBH23919.1| conserved hypothetical protein [Salinibacter ruber M8]
Length = 101
Score = 98.7 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 100 MKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGAC 158
D G D + I+E LD +RP + DGG + D +V L + GAC
Sbjct: 6 PSSPDTEDGSSPHIDPELRDNIEEALDT-IRPYLMADGGSVRLLNVTADYVVELELLGAC 64
Query: 159 SGCPSASETLKYGVANILNHFVPEVKDIRTV 189
CP ++ TL+ G+ L VP+VK + V
Sbjct: 65 GSCPMSTMTLRAGIEQALKRSVPKVKRVEAV 95
>gi|242067665|ref|XP_002449109.1| hypothetical protein SORBIDRAFT_05g005270 [Sorghum bicolor]
gi|241934952|gb|EES08097.1| hypothetical protein SORBIDRAFT_05g005270 [Sorghum bicolor]
Length = 225
Score = 98.7 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VLD VRP + DGG++ +V L ++GAC CP++ T+K G+ L
Sbjct: 75 TAENVEMVLDE-VRPYLMADGGNVALHEIDGNMVRLKLQGACGSCPASVTTMKMGIERRL 133
Query: 177 NHFVPEVKDIRTV 189
+PE+ + +
Sbjct: 134 MEKIPEIVAVEPI 146
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 119 QRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I++VLD +RP +A GG + F + IV + + G +G T++ + L
Sbjct: 158 ENIEKVLDE-IRPYLAGTGGGELEFVTIEEPIVKVRLTGPAAG----VMTVRVALTQKLR 212
Query: 178 HFVPEVKDIR 187
+P++ ++
Sbjct: 213 EKIPKIAAVQ 222
>gi|331006512|ref|ZP_08329811.1| hypothetical protein IMCC1989_384 [gamma proteobacterium IMCC1989]
gi|330419680|gb|EGG94047.1| hypothetical protein IMCC1989_384 [gamma proteobacterium IMCC1989]
Length = 193
Score = 98.7 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYG 171
DS V RI VL N V P +A GG + + DG L G C GC + S TLK G
Sbjct: 105 DDSPVEDRINYVLYNEVNPGLASHGGQVDLEDVTEDGFAILKFGGGCQGCSAVSLTLKEG 164
Query: 172 VANILNHFVPEVKDIRTV 189
V L VPE+K ++ V
Sbjct: 165 VEKTLLEKVPELKGVKDV 182
>gi|313675047|ref|YP_004053043.1| nitrogen-fixing nifu domain protein [Marivirga tractuosa DSM 4126]
gi|312941745|gb|ADR20935.1| nitrogen-fixing NifU domain protein [Marivirga tractuosa DSM 4126]
Length = 91
Score = 98.7 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
V+ RI++ LD+ +RP + DGG++ +G++ L + GAC CP ++ TLK GV
Sbjct: 2 DVLDRIEKALDS-IRPYLEADGGNVRILDLNEGVLRLELLGACGNCPMSTMTLKAGVEEA 60
Query: 176 LNHFVPEVKDIRTV 189
+ VPEV + V
Sbjct: 61 VKKSVPEVTSVEAV 74
>gi|261420397|ref|YP_003254079.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y412MC61]
gi|297528899|ref|YP_003670174.1| nitrogen-fixing NifU domain protein [Geobacillus sp. C56-T3]
gi|319768064|ref|YP_004133565.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y412MC52]
gi|261376854|gb|ACX79597.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y412MC61]
gi|297252151|gb|ADI25597.1| nitrogen-fixing NifU domain protein [Geobacillus sp. C56-T3]
gi|317112930|gb|ADU95422.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y412MC52]
Length = 78
Score = 98.7 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+D + ++++EVLD ++RP + RDGGD DG+V L + GAC CPS++ TLK G+
Sbjct: 2 TDQEIKEQVQEVLD-KLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGI 60
Query: 173 ANIL 176
L
Sbjct: 61 ERAL 64
>gi|88798134|ref|ZP_01113721.1| Thioredoxin-like protein [Reinekea sp. MED297]
gi|88779331|gb|EAR10519.1| Thioredoxin-like protein [Reinekea sp. MED297]
Length = 196
Score = 98.7 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 11/123 (8%)
Query: 78 LGMIMEHFISGD-PIIHNGGLGDMKLDDMGSGDFIE---------SDSAVVQRIKEVLDN 127
L I + P + + K G DS + ++ +L
Sbjct: 62 LSHIRVYLERNSLPYLDEAEVDYAKDRMGGQLTIKAPNAKMPKVTKDSPLPDQVNYILYT 121
Query: 128 RVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+ P +A GGD+ + D + L G C GC + TLK GV L VP++ +
Sbjct: 122 EINPGLAAHGGDVSLEELTDDNVAVLRFGGGCQGCSAVDMTLKDGVEKTLMERVPQLAGV 181
Query: 187 RTV 189
R V
Sbjct: 182 RDV 184
>gi|134300123|ref|YP_001113619.1| NifU domain-containing protein [Desulfotomaculum reducens MI-1]
gi|134052823|gb|ABO50794.1| nitrogen-fixing NifU domain protein [Desulfotomaculum reducens
MI-1]
Length = 74
Score = 98.7 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANI 175
+ +++KE L+ +VRP + RDGGD+ F + G+V + +RGAC CP A TLK G+ +
Sbjct: 1 MKEQVKEALE-QVRPFLQRDGGDVEFVDCDEKGVVKVKLRGACGSCPGALYTLKNGIERV 59
Query: 176 LNHFVPEVKDIRTV 189
L VP V ++ V
Sbjct: 60 LKQQVPGVTEVVRV 73
>gi|225849734|ref|YP_002729968.1| hypothetical protein PERMA_0171 [Persephonella marina EX-H1]
gi|225645990|gb|ACO04176.1| conserved domain protein [Persephonella marina EX-H1]
Length = 91
Score = 98.7 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++EVL+ ++RP + DGGD+ DG V++ + G+C GC + TLK G+ L
Sbjct: 14 AKVEEVLE-QIRPMLRFDGGDVELVDIGEDGTVYVRLMGSCHGCAMSLVTLKGGIEMKLK 72
Query: 178 HFVPEVKDIRTV 189
+PEVK++ V
Sbjct: 73 EAIPEVKEVVAV 84
>gi|115452669|ref|NP_001049935.1| Os03g0314700 [Oryza sativa Japonica Group]
gi|108707815|gb|ABF95610.1| NifU-like domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113548406|dbj|BAF11849.1| Os03g0314700 [Oryza sativa Japonica Group]
gi|215697309|dbj|BAG91303.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 98.3 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 56/134 (41%), Gaps = 18/134 (13%)
Query: 73 LRPPVLGMIMEH--------FISGDPIIHNGGLGDMKLDDMGSGDFI--------ESDSA 116
LRP + I + SG I G S E+
Sbjct: 17 LRPQIRLRITQATPLMPPRRLQSGPSKIQTSGARAHLAAAPASTPPAAGGGLYSAETYEL 76
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ + VLD+ VRP + DGGD+ DG++ L + GAC CPS++ T+K G+ +L
Sbjct: 77 TAENVDRVLDD-VRPYLIADGGDVTVASVEDGVISLKLEGACGSCPSSTTTMKMGIERVL 135
Query: 177 NHFVPE-VKDIRTV 189
+ VKDIR V
Sbjct: 136 KEKFGDAVKDIRQV 149
Score = 35.2 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 9/72 (12%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
Q + LD +RPA+A GG + + G P + G+
Sbjct: 158 EPTPQAVNGHLDI-LRPAIANYGGSVEVVAVDGEDCLVRYEG-----PESIG---SGIKA 208
Query: 175 ILNHFVPEVKDI 186
+ P++ ++
Sbjct: 209 AIKEKFPDITNV 220
>gi|189500939|ref|YP_001960409.1| nitrogen-fixing NifU domain-containing protein [Chlorobium
phaeobacteroides BS1]
gi|189496380|gb|ACE04928.1| nitrogen-fixing NifU domain protein [Chlorobium phaeobacteroides
BS1]
Length = 86
Score = 98.3 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASET 167
D++ + R+ + L+ VRP + DGGD G +D +V + + GAC CP ++ T
Sbjct: 6 DYLPDTDPLYDRVIKALEE-VRPYLQADGGDCQLVGITKDMLVDVKLLGACGSCPMSTLT 64
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
L+ GV + VPE+ + V
Sbjct: 65 LRAGVEQAIKKAVPEIARVEAV 86
>gi|95929342|ref|ZP_01312085.1| nitrogen-fixing NifU-like [Desulfuromonas acetoxidans DSM 684]
gi|95134458|gb|EAT16114.1| nitrogen-fixing NifU-like [Desulfuromonas acetoxidans DSM 684]
Length = 74
Score = 98.3 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ ++I+ LD VRP + DGG++ DG+V + + GAC CP ++ TLK G+ I
Sbjct: 1 MKEQIEAALDE-VRPTLLADGGNVELVDVSDDGVVSVKLVGACGSCPMSTVTLKMGIERI 59
Query: 176 LNHFVPEVKDIRTV 189
L VP VK++ V
Sbjct: 60 LLEKVPGVKEVVQV 73
>gi|328949227|ref|YP_004366564.1| nitrogen-fixing NifU domain-containing protein [Treponema
succinifaciens DSM 2489]
gi|328449551|gb|AEB15267.1| nitrogen-fixing NifU domain-containing protein [Treponema
succinifaciens DSM 2489]
Length = 78
Score = 98.3 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGV 172
D A++ ++KE L+ RP + DGGD+ F D V L + GAC CP A+ TLK G+
Sbjct: 3 DEALIAKVKETLE-AFRPQLNADGGDMEFINIDDENKVHLKLTGACGSCPMATMTLKMGI 61
Query: 173 ANILNHFVPEVKDIRT 188
L PE+ ++
Sbjct: 62 ERYLKETCPEISEVVQ 77
>gi|145219268|ref|YP_001129977.1| NifU domain-containing protein [Prosthecochloris vibrioformis DSM
265]
gi|145205432|gb|ABP36475.1| nitrogen-fixing NifU domain protein [Chlorobium phaeovibrioides DSM
265]
Length = 86
Score = 98.3 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 106 GSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSA 164
S D++ + A+ R+ L+ VRP + DGGD G +D +V + + GAC CP +
Sbjct: 3 TSKDYLPNSDALYDRVIAALET-VRPYLQVDGGDCQLVGISKDMVVDVKLLGACGSCPMS 61
Query: 165 SETLKYGVANILNHFVPEVKDIRTV 189
+ TL+ GV + +PE+ + +V
Sbjct: 62 TLTLRAGVEQAIKKAIPEIVRVESV 86
>gi|302766397|ref|XP_002966619.1| hypothetical protein SELMODRAFT_230831 [Selaginella moellendorffii]
gi|300166039|gb|EFJ32646.1| hypothetical protein SELMODRAFT_230831 [Selaginella moellendorffii]
Length = 144
Score = 98.3 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 124 VLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEV 183
VLD VRP + DGG++ + +V L ++GAC CPS+ T+K G+ L +PE+
Sbjct: 2 VLDE-VRPYLMSDGGNVALEEIDGLVVKLKLQGACGSCPSSLMTMKMGIEARLKEKIPEI 60
Query: 184 KDIRTV 189
+ V
Sbjct: 61 IGVEQV 66
Score = 37.9 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDS--AVVQRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIV 150
L + + +G ++++ + + + + + +RP + GG + +V
Sbjct: 50 EARLKEKIPEIIGVEQVQDTETGLELTEENVDKILSEIRPYLVGTGGGELTLVKIDGPVV 109
Query: 151 FLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
+ + G +G T++ V L +P + ++
Sbjct: 110 KIRIEGPAAG----VMTVRVAVTQKLREKIPMIAAVQ 142
>gi|163781905|ref|ZP_02176905.1| nifU-like domain protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159883125|gb|EDP76629.1| nifU-like domain protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 87
Score = 98.3 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ +++VLD +RPA+ DGGD+ DG V + + GACSGC + TLK G+
Sbjct: 4 PTREEVEKVLDE-IRPALRFDGGDVELVDIQEDGTVLVRLVGACSGCGMSVLTLKAGIER 62
Query: 175 ILNHFVPEVKDIRTV 189
L PE+K+++ V
Sbjct: 63 ALKQKFPEIKEVKDV 77
>gi|193212089|ref|YP_001998042.1| nitrogen-fixing NifU domain-containing protein [Chlorobaculum
parvum NCIB 8327]
gi|193085566|gb|ACF10842.1| nitrogen-fixing NifU domain protein [Chlorobaculum parvum NCIB
8327]
Length = 83
Score = 98.3 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASET 167
D++ + + R+ L+ VRP + DGGD G +D +V + + GAC CP ++ T
Sbjct: 3 DYLPNSDPLYDRVISALET-VRPYLQVDGGDCQLIGITKDMVVDVKLLGACGSCPMSTLT 61
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
L+ GV + +PE+ + V
Sbjct: 62 LRAGVEQAIKKAIPEIARVEQV 83
>gi|115487614|ref|NP_001066294.1| Os12g0176200 [Oryza sativa Japonica Group]
gi|75147032|sp|Q84LK7|NIFU1_ORYSJ RecName: Full=NifU-like protein 1, chloroplastic; AltName:
Full=OsNifu1; Flags: Precursor
gi|30698492|dbj|BAC76603.1| NifU1 [Oryza sativa Japonica Group]
gi|77553807|gb|ABA96603.1| nitrogen fixation protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113648801|dbj|BAF29313.1| Os12g0176200 [Oryza sativa Japonica Group]
Length = 226
Score = 98.3 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
++ VLD +VRP + DGGD+ +V L ++GAC CPS+ T+K G+ L
Sbjct: 79 NVESVLD-QVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIERRLMEK 137
Query: 180 VPEVKDIRTV 189
+P+V + V
Sbjct: 138 IPDVAAVEPV 147
Score = 44.0 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 100 MKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGAC 158
+ + E+ + + E + N +RP +A GG + F + IV + + G
Sbjct: 139 PDVAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGGGGLQFLMIKGPIVKVRLTG-- 196
Query: 159 SGCPSASE-TLKYGVANILNHFVPEVKDIR 187
P+A T++ V+ L +P ++ ++
Sbjct: 197 ---PAAVVRTVRIAVSKKLREKIPSIQIVQ 223
>gi|189345962|ref|YP_001942491.1| nitrogen-fixing NifU domain protein [Chlorobium limicola DSM 245]
gi|189340109|gb|ACD89512.1| nitrogen-fixing NifU domain protein [Chlorobium limicola DSM 245]
Length = 86
Score = 98.3 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 106 GSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSA 164
S D++ + A+ R+ L+ VRP + DGGD G +D +V + + GAC CP +
Sbjct: 3 TSKDYLPNSDALYDRVIAALET-VRPYLQVDGGDCQLVGITKDMVVDVKLLGACGSCPMS 61
Query: 165 SETLKYGVANILNHFVPEVKDIRTV 189
+ TL+ GV + +PE+ + +V
Sbjct: 62 TITLRAGVEQAIKKAIPEIARVESV 86
>gi|56421496|ref|YP_148814.1| nitrogen fixation NifU protein [Geobacillus kaustophilus HTA426]
gi|138896548|ref|YP_001127001.1| nitrogen fixation protein NifU [Geobacillus thermodenitrificans
NG80-2]
gi|56381338|dbj|BAD77246.1| nitrogen fixation protein (NifU protein) [Geobacillus kaustophilus
HTA426]
gi|134268061|gb|ABO68256.1| Nitrogen fixation protein NifU [Geobacillus thermodenitrificans
NG80-2]
Length = 80
Score = 98.3 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+D + ++++EVLD ++RP + RDGGD DG+V L + GAC CPS++ TLK G+
Sbjct: 4 TDQEIKEQVQEVLD-KLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGI 62
Query: 173 ANIL 176
L
Sbjct: 63 ERAL 66
>gi|328954876|ref|YP_004372209.1| nitrogen-fixing NifU domain protein [Coriobacterium glomerans PW2]
gi|328455200|gb|AEB06394.1| nitrogen-fixing NifU domain protein [Coriobacterium glomerans PW2]
Length = 92
Score = 98.3 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILN 177
+ +K VLD +RP + DGGD+ F G D G+V L ++GAC+GCP +S TL G+ +L
Sbjct: 6 EHLKRVLDE-IRPNLQADGGDLTFVGVDDDGVVQLELQGACAGCPMSSMTLSMGIERVLK 64
Query: 178 HFVPEVKDIRTV 189
V V + V
Sbjct: 65 EHVAGVTRVEAV 76
>gi|222616724|gb|EEE52856.1| hypothetical protein OsJ_35404 [Oryza sativa Japonica Group]
Length = 219
Score = 97.9 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
++ VLD +VRP + DGGD+ +V L ++GAC CPS+ T+K G+ L
Sbjct: 72 NVESVLD-QVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIERRLMEK 130
Query: 180 VPEVKDIRTV 189
+P+V + V
Sbjct: 131 IPDVAAVEPV 140
Score = 44.0 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 100 MKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGAC 158
+ + E+ + + E + N +RP +A GG + F + IV + + G
Sbjct: 132 PDVAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGGGGLQFLMIKGPIVKVRLTG-- 189
Query: 159 SGCPSASE-TLKYGVANILNHFVPEVKDIR 187
P+A T++ V+ L +P ++ ++
Sbjct: 190 ---PAAVVRTVRIAVSKKLREKIPSIQIVQ 216
>gi|218186519|gb|EEC68946.1| hypothetical protein OsI_37662 [Oryza sativa Indica Group]
Length = 221
Score = 97.9 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
++ VLD +VRP + DGGD+ +V L ++GAC CPS+ T+K G+ L
Sbjct: 74 NVESVLD-QVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIERRLMEK 132
Query: 180 VPEVKDIRTV 189
+P+V + V
Sbjct: 133 IPDVAAVEPV 142
>gi|307249357|ref|ZP_07531351.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307260607|ref|ZP_07542299.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306858651|gb|EFM90713.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306869684|gb|EFN01469.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 215
Score = 97.9 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 61/181 (33%), Gaps = 16/181 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF E + RIF + PG + G + + + G
Sbjct: 27 ISEAAQTHFRRLLEQQEENTNIRIFVVNPGTPNAECGVSYCPPN--AVEETDTQFEYNGF 84
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
P + + D D MGS + D+ ++R+ V+ +V
Sbjct: 85 SAFVDEISLPFLDEAEI-DYVTDPMGSQLTLKAPNAKMRKVADDAPFIERLDYVIQTQVN 143
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRT 188
P +A GG + D L G C+GC TLK G+ L P E+ ++
Sbjct: 144 PQLASHGGRVTLIEVTEDKYAILQFGGGCNGCSMVDVTLKEGIEKQLLAMFPDELAGVKD 203
Query: 189 V 189
V
Sbjct: 204 V 204
>gi|117924033|ref|YP_864650.1| NifU domain-containing protein [Magnetococcus sp. MC-1]
gi|117607789|gb|ABK43244.1| nitrogen-fixing NifU domain protein [Magnetococcus sp. MC-1]
Length = 76
Score = 97.9 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ ++I VL +RP + RDGGD+ F D +V + +RGAC CP A TLK G+ +
Sbjct: 1 MKEKILAVLAE-IRPMLQRDGGDVEFVDLTEDNVVQVRLRGACGSCPGAMMTLKGGIERL 59
Query: 176 LNHFVPEVKDIRTV 189
+ +PEV + V
Sbjct: 60 MKERIPEVHSVENV 73
>gi|258516727|ref|YP_003192949.1| nitrogen-fixing NifU domain-containing protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257780432|gb|ACV64326.1| nitrogen-fixing NifU domain protein [Desulfotomaculum acetoxidans
DSM 771]
Length = 73
Score = 97.9 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANI 175
+ ++++EVL +VRP + RDGGD+ DG+V + ++GACSG P A+ TLK G+ +
Sbjct: 1 MREKVEEVL-GKVRPYLQRDGGDVELVDITPDGVVQVKLKGACSGUPGATITLKQGIERV 59
Query: 176 LNHFVPEVKDIRTV 189
L VPEVK + V
Sbjct: 60 LKQEVPEVKGVVQV 73
>gi|206890081|ref|YP_002249266.1| thioredoxin family protein [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206742019|gb|ACI21076.1| thioredoxin family protein [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 74
Score = 97.9 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++++VL ++R + DGG+I +D IV++ ++GAC CP A+ TLK V L
Sbjct: 5 AKVEQVL-GKIRVGLMADGGNIDLVDIKDNIVYVKLKGACGTCPMATLTLKNWVEKTLKS 63
Query: 179 FVPEVKDIRTV 189
+PEVK++ V
Sbjct: 64 EIPEVKEVVAV 74
>gi|32034535|ref|ZP_00134699.1| COG0316: Uncharacterized conserved protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207637|ref|YP_001052862.1| putative DNA uptake protein [Actinobacillus pleuropneumoniae L20]
gi|165975605|ref|YP_001651198.1| putative DNA uptake protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190149420|ref|YP_001967945.1| hypothetical protein APP7_0151 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303249853|ref|ZP_07336057.1| putative DNA uptake protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|303251973|ref|ZP_07338144.1| putative DNA uptake protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307247135|ref|ZP_07529187.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307251678|ref|ZP_07533583.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307256174|ref|ZP_07537961.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307262738|ref|ZP_07544365.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|150383442|sp|A3MYM1|NFUA_ACTP2 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767287|sp|B3GZZ1|NFUA_ACTP7 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767288|sp|B0BS54|NFUA_ACTPJ RecName: Full=Fe/S biogenesis protein nfuA
gi|126096429|gb|ABN73257.1| hypothetical protein APL_0149 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|165875706|gb|ABY68754.1| transformation locus protein OrfG-like protein [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|189914551|gb|ACE60803.1| hypothetical protein APP7_0151 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302649403|gb|EFL79588.1| putative DNA uptake protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302651420|gb|EFL81572.1| putative DNA uptake protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306856384|gb|EFM88535.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306860875|gb|EFM92883.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306865355|gb|EFM97251.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306871883|gb|EFN03600.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 199
Score = 97.9 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 61/181 (33%), Gaps = 16/181 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF E + RIF + PG + G + + + G
Sbjct: 11 ISEAAQTHFRRLLEQQEENTNIRIFVVNPGTPNAECGVSYCPPN--AVEETDTQFEYNGF 68
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
P + + D D MGS + D+ ++R+ V+ +V
Sbjct: 69 SAFVDEISLPFLDEAEI-DYVTDPMGSQLTLKAPNAKMRKVADDAPFIERLDYVIQTQVN 127
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRT 188
P +A GG + D L G C+GC TLK G+ L P E+ ++
Sbjct: 128 PQLASHGGRVTLIEVTEDKYAILQFGGGCNGCSMVDVTLKEGIEKQLLAMFPDELAGVKD 187
Query: 189 V 189
V
Sbjct: 188 V 188
>gi|257064210|ref|YP_003143882.1| thioredoxin-like protein [Slackia heliotrinireducens DSM 20476]
gi|256791863|gb|ACV22533.1| thioredoxin-like protein [Slackia heliotrinireducens DSM 20476]
Length = 76
Score = 97.6 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+RI+ VL+ +RP++ DGGD+ DG+V + + GAC+GCP + TL GV +L
Sbjct: 6 ERIERVLE-LIRPSLQADGGDLELVDVGDDGVVTVHLTGACNGCPLSQLTLANGVRRVLK 64
Query: 178 HFVPEVKDIRTV 189
VP V D+R V
Sbjct: 65 ERVPSVTDVRAV 76
>gi|224543029|ref|ZP_03683568.1| hypothetical protein CATMIT_02223 [Catenibacterium mitsuokai DSM
15897]
gi|224524054|gb|EEF93159.1| hypothetical protein CATMIT_02223 [Catenibacterium mitsuokai DSM
15897]
Length = 84
Score = 97.6 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E ++ IKEV+ ++RP + RDGGD+ F ++DGIV++ M GAC+GC T+K G
Sbjct: 8 EIMEEKIEAIKEVIH-KLRPYLQRDGGDLEFVDFKDGIVYVHMLGACAGCMMLDSTIKDG 66
Query: 172 VANILNHFVPEVKDIRTV 189
V IL VP V +++ +
Sbjct: 67 VEQILIEEVPGVIEVQAI 84
>gi|90408321|ref|ZP_01216485.1| hypothetical protein PCNPT3_13183 [Psychromonas sp. CNPT3]
gi|90310552|gb|EAS38673.1| hypothetical protein PCNPT3_13183 [Psychromonas sp. CNPT3]
Length = 193
Score = 97.6 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 65/181 (35%), Gaps = 14/181 (7%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF N + R+F I PG G + V + L
Sbjct: 3 EITPVAQTHFKNLLAPQNEGTCIRVFVINPGTPKAECGVSYCPVEAVESSDTRLHFDGFD 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI---------ESDSAVVQRIKEVLDNRVR 130
+++ P + + + ++ D + D+ + +R++ V+ ++
Sbjct: 63 ALVDEIS--VPFLEDAFIDLVEEDTGTQLTLKAPNAKMRKVKDDAPLQERVEYVIQVQIN 120
Query: 131 PAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
P +A GG I D + + G C+GC TLK G+ +L F E+ +R
Sbjct: 121 PQLASHGGFIKLIELTEDKVAVIEFGGGCNGCSQVDLTLKDGIEKELLEEFSGELNAVRD 180
Query: 189 V 189
+
Sbjct: 181 I 181
>gi|261493940|ref|ZP_05990448.1| HesB family protein [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261494775|ref|ZP_05991254.1| HesB family protein [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261309592|gb|EEY10816.1| HesB family protein [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261310372|gb|EEY11567.1| HesB family protein [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 198
Score = 97.6 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 62/181 (34%), Gaps = 16/181 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ E + RIF + PG G + + +
Sbjct: 10 ISDAAQAHFARLLEQQEEGTNIRIFVVNPGTPGAECGVSYCPPNAVEETDTEFKFNSFSA 69
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
++ P + + D D MGS + D+ ++R+ V+ +V
Sbjct: 70 FVDDIS--LPFLDEAEI-DYVTDPMGSQLTLKAPNAKMRKVADDAPFIERLDYVIQTQVN 126
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRT 188
P +A GG + D L G C+GC TLK G+ L P E+ ++
Sbjct: 127 PQLASHGGKVTLIEITEDKYAVLQFGGGCNGCSMVDVTLKEGIEKQLLAMFPDELVGVKD 186
Query: 189 V 189
+
Sbjct: 187 I 187
>gi|254363181|ref|ZP_04979230.1| HesB family protein [Mannheimia haemolytica PHL213]
gi|153095075|gb|EDN75626.1| HesB family protein [Mannheimia haemolytica PHL213]
Length = 198
Score = 97.6 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 62/181 (34%), Gaps = 16/181 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ E + RIF + PG G + + +
Sbjct: 10 ISDAAQAHFARLLEQQEEGTNIRIFVVNPGTPGAECGVSYCPPNAVEETDTEFKFNRFSA 69
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
++ P + + D D MGS + D+ ++R+ V+ +V
Sbjct: 70 FVDDIS--LPFLDEAEI-DYVTDPMGSQLTLKAPNAKMRKVADDAPFIERLDYVIQTQVN 126
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRT 188
P +A GG + D L G C+GC TLK G+ L P E+ ++
Sbjct: 127 PQLASHGGKVTLIEITEDKYAVLQFGGGCNGCSMVDVTLKEGIEKQLLAMFPDELVGVKD 186
Query: 189 V 189
+
Sbjct: 187 I 187
>gi|90021654|ref|YP_527481.1| hypothetical protein Sde_2009 [Saccharophagus degradans 2-40]
gi|89951254|gb|ABD81269.1| HesB/YadR/YfhF [Saccharophagus degradans 2-40]
Length = 203
Score = 97.6 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYG 171
DS + RI VL N V P +A GG++ + D + + L G C GC + TLK G
Sbjct: 115 EDSTIEDRINYVLYNEVNPGLAAHGGNVSLEAITDDMHIVLKFGGGCQGCSAVDMTLKQG 174
Query: 172 VANILNHFVPEVKDIRT 188
V L VPE+K +R
Sbjct: 175 VEKTLMERVPEIKGVRD 191
>gi|148907013|gb|ABR16650.1| unknown [Picea sitchensis]
Length = 465
Score = 97.6 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ + VL N VRP + DGG++ DG++ L ++GAC CPS++ T+K G+
Sbjct: 318 DLTPENVDLVL-NDVRPYLVADGGNVEVASVEDGVISLRLQGACGTCPSSTTTMKMGIER 376
Query: 175 ILNHFVPEV-KDIRTV 189
+L +V K+IR V
Sbjct: 377 VLKEKFGDVLKEIRQV 392
>gi|242278148|ref|YP_002990277.1| nitrogen-fixing NifU domain protein [Desulfovibrio salexigens DSM
2638]
gi|242121042|gb|ACS78738.1| nitrogen-fixing NifU domain protein [Desulfovibrio salexigens DSM
2638]
Length = 74
Score = 97.6 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANI 175
+ +++ LD +VRP + DGG++ D GI + ++GAC GCP + TL+ +
Sbjct: 1 MHDKVEAALD-KVRPLLQADGGNVELVEVTDKGIAKVRLQGACKGCPMSQITLRNAIERT 59
Query: 176 LNHFVPEVKDIRT 188
L +PE+K +
Sbjct: 60 LLKEIPELKGVEP 72
>gi|119357807|ref|YP_912451.1| NifU domain-containing protein [Chlorobium phaeobacteroides DSM
266]
gi|119355156|gb|ABL66027.1| nitrogen-fixing NifU domain protein [Chlorobium phaeobacteroides
DSM 266]
Length = 86
Score = 97.6 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASET 167
++ + A+ R+ L+ VRP + DGGD G +D +V + + GAC CP ++ T
Sbjct: 6 TYLPNSDALYDRVIAALET-VRPYLQVDGGDCQLVGISKDMVVDVKLLGACGSCPMSTLT 64
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
L+ GV + +PE+ + +V
Sbjct: 65 LRAGVEQAIKKAIPEIARVESV 86
>gi|294501686|ref|YP_003565386.1| NifU-like domain-containing protein [Bacillus megaterium QM B1551]
gi|295707034|ref|YP_003600109.1| NifU-like domain-containing protein [Bacillus megaterium DSM 319]
gi|294351623|gb|ADE71952.1| NifU-like domain protein [Bacillus megaterium QM B1551]
gi|294804693|gb|ADF41759.1| NifU-like domain protein [Bacillus megaterium DSM 319]
Length = 76
Score = 97.6 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
S + ++++EVL+ ++RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 2 SEMHEQVQEVLE-KLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIER 60
Query: 175 IL 176
L
Sbjct: 61 AL 62
>gi|192359576|ref|YP_001983001.1| yhgI protein [Cellvibrio japonicus Ueda107]
gi|190685741|gb|ACE83419.1| yhgI protein [Cellvibrio japonicus Ueda107]
Length = 197
Score = 97.6 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYG 171
DS + RI VL N V P++A GG++ D I L G C GC S + TLK G
Sbjct: 109 DDSPLEDRINYVLYNDVNPSLAAHGGNVSLVEVTEDMIAILKFGGGCQGCGSVALTLKQG 168
Query: 172 VANILNHFVPEVKDIRTV 189
+ L +PE+K IR V
Sbjct: 169 IEVQLMDKLPELKGIRDV 186
>gi|16080275|ref|NP_391102.1| iron-sulfur scaffold protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|81342154|sp|O32119|YUTI_BACSU RecName: Full=Putative nitrogen fixation protein yutI
gi|2635719|emb|CAB15212.1| putative iron-sulfur scaffold protein [Bacillus subtilis subsp.
subtilis str. 168]
Length = 111
Score = 97.2 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSA 164
G + ++ + ++++EVLD ++RP + RDGGD +GIV L + GAC CPS+
Sbjct: 27 TTKGANVMTEVEMKEQVQEVLD-KLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSS 85
Query: 165 SETLKYGVANIL 176
+ TLK G+ L
Sbjct: 86 TITLKAGIERAL 97
>gi|309389827|gb|ADO77707.1| nitrogen-fixing NifU domain protein [Halanaerobium praevalens DSM
2228]
Length = 73
Score = 97.2 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ + +++ +D ++RP++ DGGD+ GIV + + GACSGCP ++ T+K G+
Sbjct: 1 MKEEVQKYID-KIRPSLQADGGDVELIEVTEAGIVKVKLLGACSGCPMSTLTIKNGIEKT 59
Query: 176 LNHFVPEVKDIRTV 189
L V VK++++V
Sbjct: 60 LKQNVEGVKEVQSV 73
>gi|322515071|ref|ZP_08068079.1| Fe/S-biogenesis protein NfuA [Actinobacillus ureae ATCC 25976]
gi|322118951|gb|EFX91128.1| Fe/S-biogenesis protein NfuA [Actinobacillus ureae ATCC 25976]
Length = 213
Score = 97.2 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 63/181 (34%), Gaps = 16/181 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF E + RIF + PG + G + ++ + + G
Sbjct: 25 ISEAAQAHFRRLLEQQEENTNIRIFVVNPGSPNAECGVSYCP--QNAVEETDTQFEYNGF 82
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
P + + D D MGS + D+ ++R+ V+ +V
Sbjct: 83 SAFVDEISLPFLDEAEI-DYVTDPMGSQLTLKAPNAKMRKVADDAPFIERLDYVIQTQVN 141
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRT 188
P +A GG + D L G C+GC TLK G+ L P E+ ++
Sbjct: 142 PQLASHGGRVTLIEVTEDKYAILQFGGGCNGCSMVDVTLKEGIEKQLLAMFPDELVGVKD 201
Query: 189 V 189
V
Sbjct: 202 V 202
>gi|163310812|pdb|2JNV|A Chain A, Solution Structure Of C-Terminal Domain Of Nifu-Like
Protein From Oryza Sativa
Length = 91
Score = 97.2 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
++ VLD +VRP + DGGD+ +V L ++GAC CPS+ T+K G+ L
Sbjct: 9 NVESVLD-QVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIERRLMEK 67
Query: 180 VPEVKDIRTV 189
+P+V + V
Sbjct: 68 IPDVAAVEPV 77
>gi|237734458|ref|ZP_04564939.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|229382278|gb|EEO32369.1| conserved hypothetical protein [Coprobacillus sp. D7]
Length = 75
Score = 97.2 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+++V+ N++RP + RDGGDI ++DGIV++ M GAC+GC ETLK GV IL
Sbjct: 1 EVEKVI-NKLRPYLNRDGGDIELIDFKDGIVYVKMLGACAGCSMLDETLKDGVEQILMEE 59
Query: 180 VPEVKDIRTV 189
VP V ++ +
Sbjct: 60 VPGVLGVQNI 69
>gi|323453984|gb|EGB09855.1| hypothetical protein AURANDRAFT_6483 [Aureococcus anophagefferens]
Length = 114
Score = 96.8 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
E++ + +RP + DGG++ G +V L + GAC CPS++ T+K G+ L +PE
Sbjct: 11 ELILDELRPYLMSDGGNVRIAGIEGPVVKLELEGACGTCPSSTMTMKMGLERRLKEAIPE 70
Query: 183 VKDIRT 188
+ D+
Sbjct: 71 ISDVVQ 76
>gi|33151606|ref|NP_872959.1| putative DNA uptake protein [Haemophilus ducreyi 35000HP]
gi|51701995|sp|Q7VNV0|NFUA_HAEDU RecName: Full=Fe/S biogenesis protein nfuA
gi|33147826|gb|AAP95348.1| transformation locus protein OrfG-like protein [Haemophilus ducreyi
35000HP]
Length = 199
Score = 96.8 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 60/178 (33%), Gaps = 10/178 (5%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF E + RIF + PG S G + + +
Sbjct: 11 ISEAAQAHFRCLLEQQEPNTHIRIFVVNPGTPSAECGVSYCPSNAVEETDTEFKFTGFSA 70
Query: 81 IMEHFI------SGDPIIHNGGLGDMKLDDMGSGDFI-ESDSAVVQRIKEVLDNRVRPAV 133
++ + + + + L S D+ ++R+ V+ +V P +
Sbjct: 71 FVDELSLPFLADAEIDYVTDQMGAQLTLKAPNSKMRKIADDAPFIERLDYVIQTQVNPQL 130
Query: 134 ARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRTV 189
A GG + D L G C+GC TLK G+ L P E+K ++ V
Sbjct: 131 ASHGGQVTLIEVTEDKYAILQFGGGCNGCSMVDVTLKEGIEKQLLATFPTELKGVKDV 188
>gi|156088839|ref|XP_001611826.1| NifU-like domain containing protein [Babesia bovis]
gi|154799080|gb|EDO08258.1| NifU-like domain containing protein [Babesia bovis]
Length = 123
Score = 96.8 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASET 167
+ E+D VV IK ++D R+ P V +DGGD+ F Y G V++ + GAC GC + T
Sbjct: 26 YSEADLEVVDSIKLLIDKRIAPVVRQDGGDVSFISYDPETGFVYVRLSGACVGCAQSDIT 85
Query: 168 LKYGVANILNHFVPEVKDI 186
LK+ + L H++ +V +
Sbjct: 86 LKHMIQGTLCHYLDDVTGV 104
>gi|268325898|emb|CBH39486.1| conserved hypothetical protein, containing NifU-like domain
[uncultured archaeon]
Length = 116
Score = 96.8 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++KEV++ ++P A DGG I D L + GAC+GCP + TL V L
Sbjct: 1 MKDKVKEVIEKELKPLFAVDGGGIELVSVDDSEAKLKLSGACAGCPMSQYTLANIVEVTL 60
Query: 177 NHFVPEVKDIRTV 189
VPE+K++ V
Sbjct: 61 KEKVPELKEVILV 73
>gi|119503957|ref|ZP_01626038.1| hypothetical protein MGP2080_09413 [marine gamma proteobacterium
HTCC2080]
gi|119459960|gb|EAW41054.1| hypothetical protein MGP2080_09413 [marine gamma proteobacterium
HTCC2080]
Length = 191
Score = 96.8 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKY 170
+ DS + RI VL N V P++A GG++ D + L G C GC + S TLK
Sbjct: 102 DVDSPIEDRINYVLYNEVNPSLAAHGGEVSLVEITDDALAILRFGGGCQGCSAVSMTLKD 161
Query: 171 GVANILNHFVPEVKDIRTV 189
GV L VPE+ +R V
Sbjct: 162 GVEKTLLEQVPELSGVRDV 180
>gi|304317418|ref|YP_003852563.1| nitrogen-fixing NifU domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778920|gb|ADL69479.1| nitrogen-fixing NifU domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 73
Score = 96.8 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +R++EVL N +RP++ DGGD+ DG+V + + GAC GCP A TLK G+
Sbjct: 1 MKERVEEVL-NLLRPSLQADGGDVELIDVTDDGVVQVKLTGACGGCPFAVMTLKEGIERA 59
Query: 176 LNHFVPEVKDIRT 188
+ +PEVK++
Sbjct: 60 IKEELPEVKEVVA 72
>gi|288818297|ref|YP_003432645.1| NifU-like protein [Hydrogenobacter thermophilus TK-6]
gi|288787697|dbj|BAI69444.1| NifU-like protein [Hydrogenobacter thermophilus TK-6]
gi|308751894|gb|ADO45377.1| nitrogen-fixing NifU domain protein [Hydrogenobacter thermophilus
TK-6]
Length = 87
Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ I+ VLD +RPA+ DGGD+ DG V + M GACSGC + TLK G+
Sbjct: 4 PTREEIEAVLDE-IRPALRFDGGDVELVDVLEDGTVLVRMMGACSGCGMSVLTLKAGIER 62
Query: 175 ILNHFVPEVKDIRTV 189
L + PE+K+++ +
Sbjct: 63 ALKNKFPEIKEVKDI 77
>gi|213584942|ref|ZP_03366768.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 136
Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYG 171
D+ +++R++ L +++ P +A GG + +G L G C+GC TLK G
Sbjct: 48 DDAPLMERVEYALQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLKEG 107
Query: 172 VANILNHFVPEVKDIRT 188
+ L + PE+K +R
Sbjct: 108 IEKQLLNEFPELKGVRD 124
>gi|213161411|ref|ZP_03347121.1| putative DNA uptake protein [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
Length = 131
Score = 96.4 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYG 171
D+ +++R++ L +++ P +A GG + +G L G C+GC TLK G
Sbjct: 43 DDAPLMERVEYALQSQINPQLAGHGGRVSLMEITDEGYAILQFGGGCNGCSMVDVTLKEG 102
Query: 172 VANILNHFVPEVKDIRT 188
+ L + PE+K +R
Sbjct: 103 IEKQLLNEFPELKGVRD 119
>gi|308808272|ref|XP_003081446.1| NifU-like domain-containing proteins (ISS) [Ostreococcus tauri]
gi|116059909|emb|CAL55968.1| NifU-like domain-containing proteins (ISS) [Ostreococcus tauri]
Length = 203
Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 104 DMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPS 163
S +++ I++VLD VRP + DGGD+ V L ++GAC CPS
Sbjct: 40 PPTSDGALDTLELTADNIEKVLDE-VRPYLIADGGDVELVEIDGLSVKLKLKGACGSCPS 98
Query: 164 ASETLKYGVANILNHFVPEVKDIRTV 189
++ T++ G+ L +P++ ++ +
Sbjct: 99 STVTMRMGIEKRLLEKIPDIMEVIQI 124
Score = 49.4 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSAS- 165
D IE + +++ L N +RP +A GG + + IV + + G P+A
Sbjct: 125 EDEIEGLPLTEENVEQTL-NEIRPYLAGTGGGVLELLDIEEPIVKVRLTG-----PAAKV 178
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
T++ V L +P + ++ V
Sbjct: 179 MTVRVAVTQKLREKIPSIAAVQLV 202
>gi|319938275|ref|ZP_08012672.1| Fe/S-biogenesis protein NfuA [Coprobacillus sp. 29_1]
gi|319806568|gb|EFW03226.1| Fe/S-biogenesis protein NfuA [Coprobacillus sp. 29_1]
Length = 74
Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ IK+V+ ++RP + RDGGDI F + +GIV++ M GAC+GC TLK GV IL
Sbjct: 5 EEIKKVIH-KLRPYLQRDGGDIEFIKFEEGIVYVQMHGACAGCTMLDATLKDGVEQILIE 63
Query: 179 FVPEVKDIRTV 189
VP V +++ +
Sbjct: 64 EVPGVLEVQAI 74
>gi|78047985|ref|YP_364160.1| thioredoxin-like protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|325927803|ref|ZP_08189028.1| thioredoxin-like protein [Xanthomonas perforans 91-118]
gi|123584909|sp|Q3BSV3|NFUA_XANC5 RecName: Full=Fe/S biogenesis protein nfuA
gi|78036415|emb|CAJ24106.1| thioredoxin-like protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|325541793|gb|EGD13310.1| thioredoxin-like protein [Xanthomonas perforans 91-118]
Length = 199
Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
G+ +++V+R++ V++N + P +A GG + + DG+V L G C GC A
Sbjct: 99 KGEAPAESASMVERVRWVVENEINPQLASHGGRVAVQEVSADGVVLLRFGGGCHGCGMAD 158
Query: 166 ETLKYGVANILNHFVPEVKDIRT 188
TLK G+ L VP V +R
Sbjct: 159 VTLKQGIEKTLMGRVPGVTAVRD 181
>gi|156743727|ref|YP_001433856.1| NifU domain-containing protein [Roseiflexus castenholzii DSM 13941]
gi|156235055|gb|ABU59838.1| nitrogen-fixing NifU domain protein [Roseiflexus castenholzii DSM
13941]
Length = 291
Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+V R+ VLD RP + GGD+ R+ +V++ + G+C+GC ++ TL+ + L
Sbjct: 95 IVARVSRVLD-AARPYIRSHGGDVELVEVRENVVYVRLHGSCNGCSLSAVTLRNEIEAAL 153
Query: 177 NHFVPEVKDIRTV 189
VPE+ ++ V
Sbjct: 154 RANVPEIVGVQVV 166
>gi|294625346|ref|ZP_06703982.1| thioredoxin-like protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294664692|ref|ZP_06730025.1| thioredoxin-like protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292600364|gb|EFF44465.1| thioredoxin-like protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292605545|gb|EFF48863.1| thioredoxin-like protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 199
Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
G+ +++V+R++ V++N V P +A GG + + DG+V L G C GC A
Sbjct: 99 KGEAPAESASMVERVRWVVENEVNPQLASHGGRVAVQEVSADGVVLLRFGGGCHGCGMAD 158
Query: 166 ETLKYGVANILNHFVPEVKDIRT 188
TLK G+ L VP V +R
Sbjct: 159 VTLKQGIEKTLMGRVPGVTAVRD 181
>gi|330720100|gb|EGG98512.1| hypothetical protein imdm_2277 [gamma proteobacterium IMCC2047]
Length = 195
Score = 96.4 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIV-FLSMRGACSGCPSASETLKYG 171
+S + +R+ VL V P +A GG++ D V L G C GC S TLK G
Sbjct: 107 ENSTLEERVNYVLWTEVNPMLASHGGEVSLMEIADETVAVLKFGGGCQGCSSVDVTLKEG 166
Query: 172 VANILNHFVPEVKDIRT 188
V L +PE+ +IR
Sbjct: 167 VEKTLREHIPELTEIRD 183
>gi|154687334|ref|YP_001422495.1| YutI [Bacillus amyloliquefaciens FZB42]
gi|154353185|gb|ABS75264.1| YutI [Bacillus amyloliquefaciens FZB42]
Length = 86
Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ + ++++EVLD ++RP + RDGGD +GIV L + GAC CPS++ TLK G+
Sbjct: 10 TEVEMKEQVQEVLD-KLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGI 68
Query: 173 ANIL 176
L
Sbjct: 69 ERAL 72
>gi|119946808|ref|YP_944488.1| putative DNA uptake protein [Psychromonas ingrahamii 37]
gi|150383446|sp|A1SZH4|NFUA_PSYIN RecName: Full=Fe/S biogenesis protein nfuA
gi|119865412|gb|ABM04889.1| HesB/YadR/YfhF-family protein [Psychromonas ingrahamii 37]
Length = 193
Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 66/181 (36%), Gaps = 14/181 (7%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF E + R+F I PG A G + + L
Sbjct: 3 EITPIAQAHFKKLLEPQKEGTHIRVFVINPGTAKAECGVSYCPPEAVESSDTRLTFDGFD 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI---------ESDSAVVQRIKEVLDNRVR 130
+++ P + + + ++ D + D+ +++R++ V+ ++
Sbjct: 63 ALIDEVS--VPFLEDAFVDLVEEDAGTQLTLKAPNAKMRKVKDDAPLLERVEYVIQVQIN 120
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANIL-NHFVPEVKDIRT 188
P +A GG I D + + G C+GC TLK GV L + F E+ +R
Sbjct: 121 PQLASHGGFIKLIEITEDNVAIIEFGGGCNGCSQVDLTLKQGVEKELIDEFSGELNAVRD 180
Query: 189 V 189
+
Sbjct: 181 I 181
>gi|319650406|ref|ZP_08004549.1| nitrogen-fixing NifU-like protein [Bacillus sp. 2_A_57_CT2]
gi|317397967|gb|EFV78662.1| nitrogen-fixing NifU-like protein [Bacillus sp. 2_A_57_CT2]
Length = 79
Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
+ + + ++++EVLD ++RP + RDGGD DGIV L + GAC CPS++ TLK
Sbjct: 1 MAEQTTMTEQVQEVLD-KLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKA 59
Query: 171 GVANIL 176
G+ L
Sbjct: 60 GIERAL 65
>gi|302770961|ref|XP_002968899.1| hypothetical protein SELMODRAFT_16556 [Selaginella moellendorffii]
gi|300163404|gb|EFJ30015.1| hypothetical protein SELMODRAFT_16556 [Selaginella moellendorffii]
Length = 170
Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 87 SGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR 146
S ++ + E+ + + +VLD VRP + DGG++
Sbjct: 1 SSREVVSPFESSNTSSTAGSGLYSTETYDFTAENVDKVLDE-VRPYLVADGGNVAVVSVA 59
Query: 147 DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE-VKDIRTV 189
DG V L ++GAC CPS++ T+K G+ +L + VK++ +
Sbjct: 60 DGTVSLELQGACGTCPSSTSTMKMGIERVLREKFGDAVKEVVDI 103
>gi|194337374|ref|YP_002019168.1| nitrogen-fixing NifU domain protein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309851|gb|ACF44551.1| nitrogen-fixing NifU domain protein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 86
Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASET 167
D++ + A+ R+ L+ VRP + DGGD G +D V + + GAC CP ++ T
Sbjct: 6 DYLPNSDALYDRVIAALET-VRPYLQVDGGDCQIVGITKDMTVDVKLLGACGSCPMSTLT 64
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
L+ GV + VPE+ + +V
Sbjct: 65 LRAGVEQAIKKAVPEIVRVESV 86
>gi|223041980|ref|ZP_03612164.1| putative DNA uptake protein [Actinobacillus minor 202]
gi|223017237|gb|EEF15665.1| putative DNA uptake protein [Actinobacillus minor 202]
Length = 199
Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 61/181 (33%), Gaps = 16/181 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF E + RIF + PG + G + + G
Sbjct: 11 ISETAQTHFRRLLEQQEEGTNIRIFVVNPGTPNAECGVSYCPPN--AVEDTDTEFQYNGF 68
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
P + + D D MG+ + D+ ++R+ V+ ++
Sbjct: 69 SAFVDEISLPFLDEAEI-DYVTDPMGAQLTLKAPNAKMRKVADDAPFIERLDYVIQTQIN 127
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
P +A GG + D L G C+GC TLK G+ +L F E+ ++
Sbjct: 128 PQLASHGGKVTLIEVTEDKFAILQFGGGCNGCSMVDVTLKEGIEKQLLLQFPDELAGVKD 187
Query: 189 V 189
V
Sbjct: 188 V 188
>gi|149374734|ref|ZP_01892507.1| Thioredoxin-like protein [Marinobacter algicola DG893]
gi|149360623|gb|EDM49074.1| Thioredoxin-like protein [Marinobacter algicola DG893]
Length = 195
Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKY 170
+ ++ + RI+ +L + + P +A GG++ + I L G C GC + S TLK
Sbjct: 105 DENAPLPDRIQYILASEINPNLAAHGGEVSLVEVAEESIAVLRFGGGCQGCSAVSLTLKQ 164
Query: 171 GVANILNHFVPEVKDIRTV 189
GV + L VPE+ +R V
Sbjct: 165 GVESTLKERVPEITAVRDV 183
>gi|295697085|ref|YP_003590323.1| nitrogen-fixing NifU domain protein [Bacillus tusciae DSM 2912]
gi|295412687|gb|ADG07179.1| nitrogen-fixing NifU domain protein [Bacillus tusciae DSM 2912]
Length = 277
Score = 96.0 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ R+ VL+ VRP + GGD+ +V++ + GACSGC ++ TL+ GV
Sbjct: 84 QDLFTRVAAVLEE-VRPYMRSHGGDVELVKVEADVVYVRLHGACSGCSLSALTLRDGVEE 142
Query: 175 ILNHFVPEVKDIR 187
+ VPEV+ +
Sbjct: 143 AVKARVPEVRRVE 155
>gi|255536379|ref|YP_003096750.1| Nitrogen-fixing NifU, C-terminal [Flavobacteriaceae bacterium
3519-10]
gi|255342575|gb|ACU08688.1| Nitrogen-fixing NifU, C-terminal [Flavobacteriaceae bacterium
3519-10]
Length = 77
Score = 95.6 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
V ++ L+ ++RP + +DGGDI R+ IV++ ++G C+GCP + T+K GV N
Sbjct: 3 EQTVSKVMYALE-KIRPFLNKDGGDIELVDVRESIVYVKLQGNCNGCPMSFSTMKLGVEN 61
Query: 175 ILNHFVPEVKDIRTV 189
+ PE++++ V
Sbjct: 62 TIKQHAPEIQEVINV 76
>gi|110596893|ref|ZP_01385183.1| Nitrogen-fixing NifU-like [Chlorobium ferrooxidans DSM 13031]
gi|110341580|gb|EAT60040.1| Nitrogen-fixing NifU-like [Chlorobium ferrooxidans DSM 13031]
Length = 86
Score = 95.6 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 106 GSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSA 164
S D++ + A+ R+ L+ VRP + DGGD G +D +V + + GAC CP +
Sbjct: 3 TSKDYLPNSDAIYDRVIAALET-VRPYLQVDGGDCQLVGISKDMVVDVKLLGACGSCPMS 61
Query: 165 SETLKYGVANILNHFVPEVKDIRTV 189
+ TL+ GV + PE+ + +V
Sbjct: 62 TLTLRAGVEQAIKKANPEIVRVESV 86
>gi|262402006|ref|ZP_06078571.1| protein gntY [Vibrio sp. RC586]
gi|262351978|gb|EEZ01109.1| protein gntY [Vibrio sp. RC586]
Length = 166
Score = 95.6 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 58/156 (37%), Gaps = 16/156 (10%)
Query: 46 FSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDD 104
F + PG + G + + + P G P + + D D
Sbjct: 2 FVVNPGTQNAECGVSYCPP--EAVEATDTEYPFSGFSAYVDELSLPFLEEAVI-DFVTDK 58
Query: 105 MGSG----------DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLS 153
MGS + D+ +++R++ L +V P +A GG + DG+ +
Sbjct: 59 MGSQLTLKAPNAKMRKVADDAPLMERVEYALQTQVNPQLAGHGGHVSLISISDDGVALVQ 118
Query: 154 MRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
G C+GC TLK G+ +L F E+ +R
Sbjct: 119 FGGGCNGCSMVDVTLKEGIEKELLAQFAGELTAVRD 154
>gi|302848639|ref|XP_002955851.1| hypothetical protein VOLCADRAFT_96828 [Volvox carteri f.
nagariensis]
gi|300258819|gb|EFJ43052.1| hypothetical protein VOLCADRAFT_96828 [Volvox carteri f.
nagariensis]
Length = 540
Score = 95.6 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI 140
I+ F SG + GS + V+ ++ L+ VRP + DGGD+
Sbjct: 366 IVSPFESGGAAAATEQRQRQSVGSSGSV------ALTVEAVQAALEE-VRPYLMADGGDV 418
Query: 141 VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+DGIV+L ++GACS CPS S T+K G+ ++
Sbjct: 419 EVVEVKDGIVYLRLQGACSSCPSQSATMKGGIERVIRQ 456
>gi|255548369|ref|XP_002515241.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
gi|223545721|gb|EEF47225.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
Length = 210
Score = 95.6 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLS 153
+ G + + +++ VRP + DGG++ DG++ L
Sbjct: 41 TAIKATSQTGSQSPGLYSAQKFELTPENVDLVLEDVRPYLIADGGNVDVVSVEDGVISLQ 100
Query: 154 MRGACSGCPSASETLKYGVANILNHFVPE-VKDIRTV 189
++GAC CPS++ T+K G+ +L + VKDIR V
Sbjct: 101 LQGACGSCPSSTTTMKMGIERVLKEKFGDSVKDIRQV 137
Score = 41.3 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 12/85 (14%)
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSA 164
+ + E+ V R ++L RPA+ GG + G + G P +
Sbjct: 137 VNDEEVKETTPEAVNRHLDIL----RPAIKNYGGSVEVVSIESGECLVKYSG-----PES 187
Query: 165 SETLKYGVANILNHFVPEVKDIRTV 189
G+ + PE+ ++ V
Sbjct: 188 IG---SGIKAAIKEKFPEITNVVLV 209
>gi|240948503|ref|ZP_04752876.1| putative DNA uptake protein [Actinobacillus minor NM305]
gi|240297011|gb|EER47582.1| putative DNA uptake protein [Actinobacillus minor NM305]
Length = 199
Score = 95.6 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 61/181 (33%), Gaps = 16/181 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF E + RIF + PG + G + + G
Sbjct: 11 ISETAQTHFCRLLEQQEEGTNIRIFVVNPGTPNAECGVSYCPPN--AVEDTDTEFQYNGF 68
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
P + + D D MG+ + D+ ++R+ V+ ++
Sbjct: 69 SAFVDEISLPFLDEAEI-DYVTDPMGAQLTLKAPNAKMRKVADDAPFIERLDYVIQTQIN 127
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
P +A GG + D L G C+GC TLK G+ +L F E+ ++
Sbjct: 128 PQLASHGGKVTLIEVTEDKFAILQFGGGCNGCSMVDVTLKEGIEKQLLLQFPDELAGVKD 187
Query: 189 V 189
V
Sbjct: 188 V 188
>gi|172035474|ref|YP_001801975.1| iron-sulfur cluster assembly protein [Cyanothece sp. ATCC 51142]
gi|171696928|gb|ACB49909.1| iron-sulfur cluster assembly protein [Cyanothece sp. ATCC 51142]
Length = 293
Score = 95.6 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVAR 135
+ MI + + ++ S ++ + I++VL+ +RP +A+
Sbjct: 184 DIDDMIADILQEKATAVAVA----TEVVKAKSETKPLTNLQKITLIQQVLEEEIRPFLAK 239
Query: 136 DGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV-PEVKDIRTV 189
DGGD+ +V ++++GAC C S++ TLK G+ L V PE+ + V
Sbjct: 240 DGGDLELIDIEGDLVKVTLQGACGSCASSTATLKGGIEARLKERVSPELT-VIAV 293
>gi|218961333|ref|YP_001741108.1| NifU-like domain protein [Candidatus Cloacamonas acidaminovorans]
gi|167729990|emb|CAO80902.1| NifU-like domain protein [Candidatus Cloacamonas acidaminovorans]
Length = 75
Score = 95.2 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++I+ +L +VRP++ DGGD+ D ++ + ++G C+GCP A+ TLK G+ ++
Sbjct: 5 EKIESIL-AKVRPSIQADGGDVELINIREDNVIEVRLKGTCNGCPMATLTLKAGIERLIK 63
Query: 178 HFVPEVKDIRTV 189
+PEVK++ V
Sbjct: 64 EEIPEVKEVIAV 75
>gi|58582689|ref|YP_201705.1| hypothetical protein XOO3066 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58427283|gb|AAW76320.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 211
Score = 95.2 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
G+ +++V+R++ V++N + P +A GG + + DG+V L G C GC A
Sbjct: 111 KGEAPAESASMVERVRWVVENEINPQLASHGGRVAVQEVSADGVVLLRFGGGCHGCGMAD 170
Query: 166 ETLKYGVANILNHFVPEVKDIRT 188
TLK G+ L VP V +R
Sbjct: 171 VTLKQGIEKTLMGRVPGVIAVRD 193
>gi|57864812|gb|AAW56987.1| nitrogen fixation protein U [Cyanothece sp. ATCC 51142]
Length = 285
Score = 95.2 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVAR 135
+ MI + + ++ S ++ + I++VL+ +RP +A+
Sbjct: 176 DIDDMIADILQEKATAVAVA----TEVVKAKSETKPLTNLQKITLIQQVLEEEIRPFLAK 231
Query: 136 DGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV-PEVKDIRTV 189
DGGD+ +V ++++GAC C S++ TLK G+ L V PE+ + V
Sbjct: 232 DGGDLELIDIEGDLVKVTLQGACGSCASSTATLKGGIEARLKERVSPELT-VIAV 285
>gi|251798821|ref|YP_003013552.1| nitrogen-fixing NifU domain protein [Paenibacillus sp. JDR-2]
gi|247546447|gb|ACT03466.1| nitrogen-fixing NifU domain protein [Paenibacillus sp. JDR-2]
Length = 80
Score = 95.2 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ + +VLD ++RP + RDGGD+ DGIV L + GAC CPS++ TLK G+
Sbjct: 6 DTMYDEVLDVLD-KLRPFLQRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIER 64
Query: 175 IL 176
L
Sbjct: 65 AL 66
>gi|225437626|ref|XP_002278510.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297744011|emb|CBI36981.3| unnamed protein product [Vitis vinifera]
Length = 213
Score = 95.2 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ + +++ VRP + DGG++ DG++ L ++GAC CPS++ T+ G+ +
Sbjct: 66 ELTAKNVDLVLEDVRPYLISDGGNVDVVSVEDGVISLKLQGACGSCPSSTTTMTMGIERV 125
Query: 176 LNHFVPE-VKDIRTV 189
L + VKDIR V
Sbjct: 126 LKEKFGDAVKDIRQV 140
>gi|21242852|ref|NP_642434.1| hypothetical protein XAC2117 [Xanthomonas axonopodis pv. citri str.
306]
gi|51702177|sp|Q8PKQ2|NFUA_XANAC RecName: Full=Fe/S biogenesis protein nfuA
gi|21108342|gb|AAM36970.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 199
Score = 95.2 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
G+ +++V+R++ V++N + P +A GG + + +G+V L G C GC A
Sbjct: 99 KGEAPAESASMVERVRWVVENEINPQLASHGGRVAVQEVSAEGVVLLRFGGGCHGCGMAD 158
Query: 166 ETLKYGVANILNHFVPEVKDIRT 188
TLK G+ L VP V +R
Sbjct: 159 VTLKQGIEKTLMGRVPGVTAVRD 181
>gi|157693637|ref|YP_001488099.1| iron-sulfur assembly protein [Bacillus pumilus SAFR-032]
gi|194015287|ref|ZP_03053903.1| conserved domain protein [Bacillus pumilus ATCC 7061]
gi|157682395|gb|ABV63539.1| possible iron-sulfur assembly protein [Bacillus pumilus SAFR-032]
gi|194012691|gb|EDW22257.1| conserved domain protein [Bacillus pumilus ATCC 7061]
Length = 78
Score = 95.2 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ + +++EVLD ++RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 2 TEVEMKDQVQEVLD-KLRPFLLRDGGDCELVDIEDGIVKLRLLGACGSCPSSTITLKAGI 60
Query: 173 ANIL 176
L
Sbjct: 61 ERAL 64
>gi|326494232|dbj|BAJ90385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 224
Score = 95.2 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + VLD+ VRP + DGGD+ DG+V L + GACS CPS++ T+ G+
Sbjct: 73 TYELTPDNVDRVLDD-VRPYLISDGGDVAVVSVEDGVVSLRLEGACSSCPSSTTTMNMGI 131
Query: 173 ANILNHFVPE-VKDIRTV 189
+L + +KDIR V
Sbjct: 132 ERVLKEKFGDAIKDIRQV 149
>gi|255632161|gb|ACU16433.1| unknown [Glycine max]
Length = 221
Score = 95.2 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Query: 73 LRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPA 132
L+P VL + I + + G + + +++ + VRP
Sbjct: 29 LKPSVLNFRPQKQNRSIRIRSPSASNPNQNESSSPGLYSAKKFDLTASNVDLVLDDVRPY 88
Query: 133 VARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE-VKDIRTV 189
+ DGG++ DG+V L + GAC CPS++ T+ G+ +L + VKDIR V
Sbjct: 89 LIADGGNVDVVSVEDGVVSLRLEGACESCPSSTTTMTMGIERVLKEKFGDAVKDIRQV 146
Score = 39.0 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 9/75 (12%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E V+ + L+ +RPA+ GG + G + G P + G
Sbjct: 150 EPRETTVEAVNNHLEI-LRPAIKNYGGSVEVVSVEGGECEVKYVG-----PDSIG---SG 200
Query: 172 VANILNHFVPEVKDI 186
+ + P++ ++
Sbjct: 201 IKATIKEKFPDILNV 215
>gi|289665916|ref|ZP_06487497.1| hypothetical protein XcampvN_23290 [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 199
Score = 95.2 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
G+ +++V+R++ V++N + P +A GG + + DG+V L G C GC A
Sbjct: 99 KGEAPAESASMVERVRWVVENEINPQLASHGGRVAVQEVSADGVVLLRFGGGCHGCGMAD 158
Query: 166 ETLKYGVANILNHFVPEVKDIRT 188
TLK G+ L VP V +R
Sbjct: 159 VTLKQGIEKTLMGRVPGVIAVRD 181
>gi|188577468|ref|YP_001914397.1| protein GntY [Xanthomonas oryzae pv. oryzae PXO99A]
gi|254767336|sp|B2STN5|NFUA_XANOP RecName: Full=Fe/S biogenesis protein nfuA
gi|188521920|gb|ACD59865.1| protein GntY [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 199
Score = 95.2 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
G+ +++V+R++ V++N + P +A GG + + DG+V L G C GC A
Sbjct: 99 KGEAPAESASMVERVRWVVENEINPQLASHGGRVAVQEVSADGVVLLRFGGGCHGCGMAD 158
Query: 166 ETLKYGVANILNHFVPEVKDIRT 188
TLK G+ L VP V +R
Sbjct: 159 VTLKQGIEKTLMGRVPGVIAVRD 181
>gi|172058330|ref|YP_001814790.1| NifU domain-containing protein [Exiguobacterium sibiricum 255-15]
gi|171990851|gb|ACB61773.1| nitrogen-fixing NifU domain protein [Exiguobacterium sibiricum
255-15]
Length = 75
Score = 95.2 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ ++ EVL+ ++RP + RDGGD+ DGIV L + GAC CPS++ TLK G+
Sbjct: 2 EMFDQVNEVLE-KLRPFLLRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERA 60
Query: 176 L 176
L
Sbjct: 61 L 61
>gi|167041235|gb|ABZ05992.1| putative HesB-like domain protein [uncultured marine microorganism
HF4000_001N02]
Length = 189
Score = 95.2 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 5/160 (3%)
Query: 33 AKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPII 92
A++A+ LA RI I G F YD V + L + G+ + +
Sbjct: 19 AEQADDDELALRI-EIIGRGPKGFQYDLQFVTGGDGAEDDLVLKIDGITVRVAARSVQYL 77
Query: 93 HNGGLGDMKLDDMGSGDFIESD----SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG 148
L + G F + + Q++ +++ + PAVA GG + G +
Sbjct: 78 EGTTLDFRETLMGGGFAFDNPNPMWVDELSQKVADIITQEINPAVASHGGVVELVGVDED 137
Query: 149 IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
++ G C GC A TLK GV ++ VPE+ ++
Sbjct: 138 KAIIAFGGGCQGCGMADVTLKQGVEVMIKDKVPEIIEVID 177
>gi|319787304|ref|YP_004146779.1| HesB/YadR/YfhF-family protein [Pseudoxanthomonas suwonensis 11-1]
gi|317465816|gb|ADV27548.1| HesB/YadR/YfhF-family protein [Pseudoxanthomonas suwonensis 11-1]
Length = 198
Score = 94.9 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Query: 91 IIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGI 149
+ G G+ +++V+R++ V++N + P +A GG + DG
Sbjct: 82 VFQGTGAQLTIRAPRIKGEAPGEAASIVERVRWVMENEINPQLASHGGRATVEEVSADGT 141
Query: 150 VFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
V+L G C GC A TLK G+ L VP V +R
Sbjct: 142 VWLRFGGGCHGCGMADVTLKQGIEKTLIARVPGVTAVRD 180
>gi|253575294|ref|ZP_04852632.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251845291|gb|EES73301.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 81
Score = 94.9 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ + EVLD ++RP + RDGGD+ DGIV L + GAC CPS++ TLK G+
Sbjct: 7 DKLYDEVLEVLD-KLRPFLQRDGGDVELVDVEDGIVKLKLMGACGSCPSSTITLKAGIER 65
Query: 175 IL 176
L
Sbjct: 66 AL 67
>gi|325918641|ref|ZP_08180745.1| thioredoxin-like protein [Xanthomonas vesicatoria ATCC 35937]
gi|325535148|gb|EGD07040.1| thioredoxin-like protein [Xanthomonas vesicatoria ATCC 35937]
Length = 199
Score = 94.9 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
G+ +++V+R++ V++N + P +A GG + + DG+V L G C GC A
Sbjct: 99 KGEAPADSASMVERVRWVVENEINPQLASHGGRVAVQEVSADGVVLLRFGGGCHGCGMAD 158
Query: 166 ETLKYGVANILNHFVPEVKDIRT 188
TLK G+ L VP V +R
Sbjct: 159 VTLKQGIEKTLMGRVPGVIAVRD 181
>gi|325921235|ref|ZP_08183096.1| thioredoxin-like protein [Xanthomonas gardneri ATCC 19865]
gi|325548298|gb|EGD19291.1| thioredoxin-like protein [Xanthomonas gardneri ATCC 19865]
Length = 199
Score = 94.9 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
G+ +++V+R++ V++N + P +A GG + + DG+V L G C GC A
Sbjct: 99 KGEAPADSASMVERVRWVVENEINPQLASHGGRVAVQEVSADGVVLLRFGGGCHGCGMAD 158
Query: 166 ETLKYGVANILNHFVPEVKDIRT 188
TLK G+ L VP V +R
Sbjct: 159 VTLKQGIEKTLMGRVPGVIAVRD 181
>gi|289548959|ref|YP_003473947.1| nitrogen-fixing NifU domain protein [Thermocrinis albus DSM 14484]
gi|289182576|gb|ADC89820.1| nitrogen-fixing NifU domain protein [Thermocrinis albus DSM 14484]
Length = 85
Score = 94.9 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ I+ VLD +RPA+ DGGD+ DG V + M GAC+GC + TLK G+
Sbjct: 2 PTREEIEAVLDE-IRPALRFDGGDVELVDVLEDGTVLVRMIGACAGCGMSVLTLKAGIER 60
Query: 175 ILNHFVPEVKDIRTV 189
L P++K+++ V
Sbjct: 61 ALKSRFPDIKEVKDV 75
>gi|260770783|ref|ZP_05879712.1| protein gntY [Vibrio furnissii CIP 102972]
gi|260614020|gb|EEX39210.1| protein gntY [Vibrio furnissii CIP 102972]
gi|315178824|gb|ADT85738.1| predicted gluconate transport-associated protein [Vibrio furnissii
NCTC 11218]
Length = 166
Score = 94.9 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 16/156 (10%)
Query: 46 FSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDD 104
F + PG + G + + + ++ P + + D D
Sbjct: 2 FVVNPGTQNAECGVSYCPPEAVEATDTEITYSDFSAYVDELS--LPFLEEAVI-DFVTDK 58
Query: 105 MGSG----------DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLS 153
MGS + D+ +++R++ + +V P +A GG + DG+ +
Sbjct: 59 MGSQLTLKAPNAKMRKVADDAPLMERVEYAIQTQVNPQLAGHGGHVQLLEISDDGVALVQ 118
Query: 154 MRGACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
G C+GC TLK G+ +L F E+ +R
Sbjct: 119 FGGGCNGCSMVDVTLKEGIEKELLAQFEGELTAVRD 154
>gi|84624576|ref|YP_451948.1| hypothetical protein XOO_2919 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|166712246|ref|ZP_02243453.1| hypothetical protein Xoryp_12525 [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|123521499|sp|Q2P1A3|NFUA_XANOM RecName: Full=Fe/S biogenesis protein nfuA
gi|84368516|dbj|BAE69674.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 199
Score = 94.9 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
G+ +++V+R++ V++N + P +A GG + + DG+V L G C GC A
Sbjct: 99 KGEAPAESASMVERVRWVVENEINPQLASHGGRVAVQEVSADGVVLLRFGGGCHGCGMAD 158
Query: 166 ETLKYGVANILNHFVPEVKDIRT 188
TLK G+ L VP V +R
Sbjct: 159 VTLKQGIEKTLMGRVPGVIAVRD 181
>gi|254524604|ref|ZP_05136659.1| protein GntY [Stenotrophomonas sp. SKA14]
gi|219722195|gb|EED40720.1| protein GntY [Stenotrophomonas sp. SKA14]
Length = 199
Score = 94.9 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
G+ +++V+R+ V++N + P +A GG + + DG+V L G C GC A
Sbjct: 99 KGEAPGDAASLVERVHWVVENEINPQLASHGGKVAVQEVSADGVVLLRFGGGCQGCGMAD 158
Query: 166 ETLKYGVANILNHFVPEVKDIRT 188
TLK G+ L VP V +R
Sbjct: 159 VTLKQGIEKTLMGRVPGVTAVRD 181
>gi|332296888|ref|YP_004438810.1| nitrogen-fixing NifU domain-containing protein [Treponema
brennaborense DSM 12168]
gi|332179991|gb|AEE15679.1| nitrogen-fixing NifU domain-containing protein [Treponema
brennaborense DSM 12168]
Length = 76
Score = 94.9 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANI 175
+ ++K+ LD ++RP + DGGD+ F G VF+ + GAC CP A+ TLK GV
Sbjct: 3 LEDKVKDALD-KIRPQLQADGGDLEFVSMEAGGKVFVKLTGACGNCPMATMTLKQGVERF 61
Query: 176 LNHFVPEVKDIRT 188
L +PEV ++
Sbjct: 62 LKDTIPEVTEVLQ 74
>gi|269216053|ref|ZP_06159907.1| NifU family protein [Slackia exigua ATCC 700122]
gi|269130312|gb|EEZ61390.1| NifU family protein [Slackia exigua ATCC 700122]
Length = 76
Score = 94.9 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+R+ VLD VRP++ DGGD+ DGIV + ++GAC+GC +S T+ GV IL
Sbjct: 6 KRVSRVLD-MVRPSLQADGGDLELVDITDDGIVRVRLQGACNGCALSSLTIANGVERILK 64
Query: 178 HFVPEVKDIRTV 189
VPEV + ++
Sbjct: 65 EHVPEVAKVISI 76
>gi|307244961|ref|ZP_07527058.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307253914|ref|ZP_07535766.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258368|ref|ZP_07540109.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306854126|gb|EFM86334.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306863118|gb|EFM95060.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867552|gb|EFM99399.1| Fe/S bioproteinsis protein nfuA [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 199
Score = 94.9 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 60/181 (33%), Gaps = 16/181 (8%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF E + RIF + PG + G + + + G
Sbjct: 11 ISGAAQTHFRRLLEQQEENTNIRIFVVNPGTPNAECGVSYCPPN--AVEETDTQFEYNGF 68
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRVR 130
P + + D D MGS + D+ ++R+ V+ +V
Sbjct: 69 SAFVDEISLPFLDEAEI-DYVTDPMGSQLTLKAPNAKMRKVADDAPFIERLDYVIQTQVN 127
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFV-PEVKDIRT 188
P +A GG + D L G C+GC TLK G+ L E+ ++
Sbjct: 128 PQLASHGGRVTLIEVTEDKYAILQFGGGCNGCSMVDVTLKEGIEKQLLAMFHDELAGVKD 187
Query: 189 V 189
V
Sbjct: 188 V 188
>gi|332703499|ref|ZP_08423587.1| nitrogen-fixing NifU domain-containing protein [Desulfovibrio
africanus str. Walvis Bay]
gi|332553648|gb|EGJ50692.1| nitrogen-fixing NifU domain-containing protein [Desulfovibrio
africanus str. Walvis Bay]
Length = 80
Score = 94.9 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGV 172
D+ + +R+ LD +RP + DGGD+ D G+V + +RGAC C + TLK G+
Sbjct: 5 DTTMRERVLAALD-MIRPVLRADGGDVELVEVTDTGVVKVRLRGACQCCTMSRMTLKNGI 63
Query: 173 ANILNHFVPEVKDIRTV 189
+ +P + + +V
Sbjct: 64 ERTILKEIPGLTSVESV 80
>gi|71278620|ref|YP_266987.1| putative DNA uptake protein [Colwellia psychrerythraea 34H]
gi|119370607|sp|Q48AC6|NFUA_COLP3 RecName: Full=Fe/S biogenesis protein nfuA
gi|71144360|gb|AAZ24833.1| HesB-like domain/NifU-like domain protein [Colwellia
psychrerythraea 34H]
Length = 192
Score = 94.9 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 59/181 (32%), Gaps = 16/181 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF + R+F + PG A G + + D L
Sbjct: 3 TISENAQQHFIKLLSQQAEGTHIRVFVVNPGTAKAECGVSYCPPDAVEADDIQLPFEGFS 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
+++ G D D MGS + D+ + +R+ L V
Sbjct: 63 AMVDADSKG---FLEDAEIDFTTDQMGSQLTLKAPNAKLRKVADDAPLFERVHYFLQAEV 119
Query: 130 RPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNH-FVPEVKDIR 187
P +A GG+ DG L G C+GC T+K G+ L E+K ++
Sbjct: 120 NPQLAGHGGECTLVEITDDGYAVLQFGGGCNGCAQIDVTVKDGIEKQLIELMAGEIKGVK 179
Query: 188 T 188
Sbjct: 180 D 180
>gi|309810977|ref|ZP_07704775.1| NifU-like protein [Dermacoccus sp. Ellin185]
gi|308434941|gb|EFP58775.1| NifU-like protein [Dermacoccus sp. Ellin185]
Length = 219
Score = 94.5 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 43/200 (21%), Positives = 77/200 (38%), Gaps = 22/200 (11%)
Query: 1 MFIQTEDTPNPATLK--FIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGY 58
+ + E TP+P ++ F + + GA+ + EA + S PG V
Sbjct: 4 LALHPEATPDPDVVRWRFSGARCDVPLGAL--AAWPEALTRAGVGDVVSEPGALVVMLSA 61
Query: 59 DFITVGKDQYDWEHLRPPVLGMIMEH-------FISGDPIIHNGGLGDMKLDDMGSGDFI 111
+ W V + + F++ +P D G+
Sbjct: 62 --------PHTWASDGAAVRDALSDVLADASSRFVAREPGGVEPSDASSNADGDAVGELD 113
Query: 112 E---SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
E D+ + ++ + V+ + GGDI G G+V +S+ GAC GCP+A+ TL
Sbjct: 114 EGAADDTEIAEQARVVVADVAEQVAHSHGGDITLLGVERGVVTVSLTGACDGCPAAAMTL 173
Query: 169 KYGVANILNHFVPEVKDIRT 188
+ + L V V+++R
Sbjct: 174 HRRIEDELRARVGGVREVRA 193
>gi|307545194|ref|YP_003897673.1| thioredoxin [Halomonas elongata DSM 2581]
gi|307217218|emb|CBV42488.1| K07400 thioredoxin-like protein [Halomonas elongata DSM 2581]
Length = 250
Score = 94.5 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYG 171
+DS + R+ VL + + P +A GG+I + + L+ G C GC + TLK G
Sbjct: 161 ADSPLEDRVNYVLYSEINPGLAAHGGEIKLVQLTEEQVAVLAFGGGCQGCAAVDLTLKEG 220
Query: 172 VANILNHFVPEVKDIRTV 189
V L +PE+ IR V
Sbjct: 221 VERTLMERIPELSGIRDV 238
>gi|308174916|ref|YP_003921621.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens DSM 7]
gi|307607780|emb|CBI44151.1| putative iron-sulfur scaffold protein [Bacillus amyloliquefaciens
DSM 7]
gi|328554923|gb|AEB25415.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens TA208]
gi|328913234|gb|AEB64830.1| Putative nitrogen fixation protein yutI [Bacillus amyloliquefaciens
LL3]
Length = 78
Score = 94.5 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ + ++++EVLD ++RP + RDGGD +GIV L + GAC CPS++ TLK G+
Sbjct: 2 TEVEMKEQVQEVLD-KLRPFLLRDGGDCELVDIDEGIVKLRLLGACGSCPSSTITLKAGI 60
Query: 173 ANIL 176
L
Sbjct: 61 ERAL 64
>gi|126698430|ref|YP_001087327.1| hypothetical protein CD0850 [Clostridium difficile 630]
gi|254974469|ref|ZP_05270941.1| hypothetical protein CdifQC_04113 [Clostridium difficile QCD-66c26]
gi|255091862|ref|ZP_05321340.1| hypothetical protein CdifC_04255 [Clostridium difficile CIP 107932]
gi|255099963|ref|ZP_05328940.1| hypothetical protein CdifQCD-6_04105 [Clostridium difficile
QCD-63q42]
gi|255305852|ref|ZP_05350024.1| hypothetical protein CdifA_04615 [Clostridium difficile ATCC 43255]
gi|255313596|ref|ZP_05355179.1| hypothetical protein CdifQCD-7_04573 [Clostridium difficile
QCD-76w55]
gi|255516280|ref|ZP_05383956.1| hypothetical protein CdifQCD-_04157 [Clostridium difficile
QCD-97b34]
gi|255649377|ref|ZP_05396279.1| hypothetical protein CdifQCD_04212 [Clostridium difficile
QCD-37x79]
gi|255654901|ref|ZP_05400310.1| hypothetical protein CdifQCD-2_04194 [Clostridium difficile
QCD-23m63]
gi|260682549|ref|YP_003213834.1| hypothetical protein CD196_0799 [Clostridium difficile CD196]
gi|260686148|ref|YP_003217281.1| hypothetical protein CDR20291_0780 [Clostridium difficile R20291]
gi|306519465|ref|ZP_07405812.1| hypothetical protein CdifQ_04665 [Clostridium difficile QCD-32g58]
gi|115249867|emb|CAJ67684.1| putative NifU-like protein [Clostridium difficile]
gi|260208712|emb|CBA61527.1| conserved hypothetical protein [Clostridium difficile CD196]
gi|260212164|emb|CBE02822.1| conserved hypothetical protein [Clostridium difficile R20291]
Length = 74
Score = 94.5 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +++++VL+ +++P + RDGGD+ +G+V + ++GACSGCP A+ T+K + N+
Sbjct: 1 MREKVEKVLEEKIKPVLQRDGGDVELIDVNENGVVLVRLQGACSGCPGATMTIKAIIENV 60
Query: 176 LNHFVPEVKDIRTV 189
L VP V + V
Sbjct: 61 LVSEVPGVTQVLGV 74
>gi|89100547|ref|ZP_01173407.1| nitrogen fixation protein (NifU protein) [Bacillus sp. NRRL
B-14911]
gi|89084734|gb|EAR63875.1| nitrogen fixation protein (NifU protein) [Bacillus sp. NRRL
B-14911]
Length = 77
Score = 94.5 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
+ ++ ++EVLD ++RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 2 EQDIISDVQEVLD-KLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIE 60
Query: 174 NIL 176
L
Sbjct: 61 RAL 63
>gi|221311164|ref|ZP_03593011.1| hypothetical protein Bsubs1_17486 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315491|ref|ZP_03597296.1| hypothetical protein BsubsN3_17402 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320406|ref|ZP_03601700.1| hypothetical protein BsubsJ_17365 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324690|ref|ZP_03605984.1| hypothetical protein BsubsS_17516 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|296331794|ref|ZP_06874261.1| putative iron-sulfur scaffold protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675816|ref|YP_003867488.1| putative iron-sulfur scaffold protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|311069717|ref|YP_003974640.1| putative iron-sulfur scaffold protein [Bacillus atrophaeus 1942]
gi|321312766|ref|YP_004205053.1| putative iron-sulfur scaffold protein [Bacillus subtilis BSn5]
gi|291485686|dbj|BAI86761.1| hypothetical protein BSNT_04769 [Bacillus subtilis subsp. natto
BEST195]
gi|296151119|gb|EFG92001.1| putative iron-sulfur scaffold protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414060|gb|ADM39179.1| putative iron-sulfur scaffold protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|310870234|gb|ADP33709.1| putative iron-sulfur scaffold protein [Bacillus atrophaeus 1942]
gi|320019040|gb|ADV94026.1| putative iron-sulfur scaffold protein [Bacillus subtilis BSn5]
Length = 78
Score = 94.5 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ + ++++EVLD ++RP + RDGGD +GIV L + GAC CPS++ TLK G+
Sbjct: 2 TEVEMKEQVQEVLD-KLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGI 60
Query: 173 ANIL 176
L
Sbjct: 61 ERAL 64
>gi|313683413|ref|YP_004061151.1| nitrogen-fixing nifu domain protein [Sulfuricurvum kujiense DSM
16994]
gi|313156273|gb|ADR34951.1| nitrogen-fixing NifU domain protein [Sulfuricurvum kujiense DSM
16994]
Length = 91
Score = 94.5 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD ++Q ++ V+D ++RP +A DGGDI F G ++G +++ ++GAC GC S+ TL
Sbjct: 1 MIPFSDEELMQPVRNVID-KIRPTLALDGGDIAFLGVKNGTIYVQLQGACIGCSSSGNTL 59
Query: 169 KYGVANILNHFV-PEVKDIRTV 189
KYGV L + PE+ + V
Sbjct: 60 KYGVERQLRMDIHPELT-VINV 80
>gi|315187331|gb|EFU21087.1| nitrogen-fixing NifU domain protein [Spirochaeta thermophila DSM
6578]
Length = 74
Score = 94.5 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+++V+ N +RPA+ DGGDI G+V + + GAC GCP + TLK GV L
Sbjct: 6 VEKVI-NEIRPALKADGGDIQLLEVTEQGVVKVRLTGACHGCPMSQITLKQGVEAYLKRK 64
Query: 180 VPEVKDIRTV 189
+PE+ + V
Sbjct: 65 LPEISSVEAV 74
>gi|218246615|ref|YP_002371986.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 8801]
gi|218167093|gb|ACK65830.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 8801]
Length = 294
Score = 94.5 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I+++LD ++PA+A+DGGD+ +V + ++GAC C S+++TLK G+ L V
Sbjct: 226 IQQILDEEIKPALAKDGGDVELFDVEGDLVKVILQGACGSCASSTQTLKMGIEARLRERV 285
Query: 181 -PEVKDIRTV 189
PE+ + +V
Sbjct: 286 SPELT-VISV 294
>gi|255994758|ref|ZP_05427893.1| NifU family protein [Eubacterium saphenum ATCC 49989]
gi|255993471|gb|EEU03560.1| NifU family protein [Eubacterium saphenum ATCC 49989]
Length = 74
Score = 94.1 bits (233), Expect = 7e-18, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ + IK L+ +VRPA+ DGGD+ F + D +V + ++G C GCP + T+K +
Sbjct: 1 MKEEIKAALE-KVRPALQMDGGDVEFVDFTDDKVVKVKLQGHCCGCPMSQMTVKGFIEKA 59
Query: 176 LNHFVPEVKDIRTV 189
L P++K + TV
Sbjct: 60 LRESFPDIKGVETV 73
>gi|302784600|ref|XP_002974072.1| hypothetical protein SELMODRAFT_58377 [Selaginella moellendorffii]
gi|300158404|gb|EFJ25027.1| hypothetical protein SELMODRAFT_58377 [Selaginella moellendorffii]
Length = 162
Score = 94.1 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
E+ + + +VLD VRP + DGG++ DG V L ++GAC CPS++ T+K G
Sbjct: 15 ETYDFTAENVDKVLDE-VRPYLVADGGNVAVVSVADGTVSLELQGACGTCPSSTSTMKMG 73
Query: 172 VANILNHFVPE-VKDIRTV 189
+ +L + VK++ +
Sbjct: 74 IERVLREKFGDAVKEVVDI 92
>gi|86134908|ref|ZP_01053490.1| NifU-like protein [Polaribacter sp. MED152]
gi|85821771|gb|EAQ42918.1| NifU-like protein [Polaribacter sp. MED152]
Length = 78
Score = 94.1 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ +++ LD +RP + DGG+I D IV + ++GAC+GC TLK GV
Sbjct: 4 QEIHNNVEKALDE-IRPFLMSDGGNIKLLSIEDAIVKVQLQGACTGCSVNQMTLKNGVEA 62
Query: 175 ILNHFVPEVKDIRTV 189
+ + P+++ + V
Sbjct: 63 TIKKYAPQIEQVINV 77
>gi|257059658|ref|YP_003137546.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 8802]
gi|256589824|gb|ACV00711.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 8802]
Length = 294
Score = 94.1 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I+++LD ++PA+A+DGGD+ +V + ++GAC C S+++TLK G+ L V
Sbjct: 226 IQQILDEEIKPALAKDGGDVELFDVEGDLVKVILQGACGSCASSTQTLKMGIEARLRERV 285
Query: 181 -PEVKDIRTV 189
PE+ + +V
Sbjct: 286 SPELT-VISV 294
>gi|194366446|ref|YP_002029056.1| HesB/YadR/YfhF-family protein [Stenotrophomonas maltophilia R551-3]
gi|254767330|sp|B4SPV3|NFUA_STRM5 RecName: Full=Fe/S biogenesis protein nfuA
gi|194349250|gb|ACF52373.1| HesB/YadR/YfhF-family protein [Stenotrophomonas maltophilia R551-3]
Length = 199
Score = 94.1 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
G+ +++V+R+ V++N + P +A GG + + +G+V L G C GC A
Sbjct: 99 KGEAPGDAASLVERVHWVVENEINPQLASHGGKVAVQEVSAEGVVLLRFGGGCQGCGMAD 158
Query: 166 ETLKYGVANILNHFVPEVKDIRT 188
TLK G+ L VP V +R
Sbjct: 159 VTLKQGIEKTLMGRVPGVTAVRD 181
>gi|189485737|ref|YP_001956678.1| hypothetical protein TGRD_734 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287696|dbj|BAG14217.1| conserved hypothetical protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 75
Score = 94.1 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +++++ L++ VRP + D GD+ DGIV + + G+C GCP A+ TL+YGV N
Sbjct: 3 LREKVEKALES-VRPHLQADCGDVELIDVSEDGIVKVKLTGSCGGCPMAAMTLQYGVTNT 61
Query: 176 LNHFVPEVKDIRTV 189
+ VPEVKD++++
Sbjct: 62 IKQAVPEVKDVQSI 75
>gi|2183204|gb|AAC33371.1| NifU [Cyanothece sp. PCC 8801]
Length = 294
Score = 94.1 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I+++LD ++PA+A+DGGD+ +V + ++GAC C S+++TLK G+ L V
Sbjct: 226 IQQILDEEIKPALAKDGGDVELFDVEGDLVKVILQGACGSCASSTQTLKMGIEARLRERV 285
Query: 181 -PEVKDIRTV 189
PE+ + +V
Sbjct: 286 SPELT-VISV 294
>gi|310643822|ref|YP_003948580.1| nifu-like protein [Paenibacillus polymyxa SC2]
gi|309248772|gb|ADO58339.1| NifU-like protein [Paenibacillus polymyxa SC2]
Length = 81
Score = 94.1 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 113 SDSAVVQRIKEVLD--NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
S++ VQ EV D +++RP + RDGGD+ DGIV L + GAC CPS++ TLK
Sbjct: 2 SEAQSVQMYDEVADVLDKLRPFLQRDGGDVELVDVEDGIVKLKLVGACGSCPSSTITLKA 61
Query: 171 GVANIL 176
G+ L
Sbjct: 62 GIERAL 67
>gi|332982274|ref|YP_004463715.1| nitrogen-fixing NifU domain-containing protein [Mahella
australiensis 50-1 BON]
gi|332699952|gb|AEE96893.1| nitrogen-fixing NifU domain protein [Mahella australiensis 50-1
BON]
Length = 73
Score = 94.1 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ ++++ L+ ++RPA+ DGGD+ DG+V + + GAC CP A TLK G+
Sbjct: 1 MKEKVEAALE-KIRPALKADGGDVELVDVASDGVVKVKLTGACGACPFALMTLKQGIEET 59
Query: 176 LNHFVPEVKDIRTV 189
L VPEVK++ V
Sbjct: 60 LKESVPEVKEVVAV 73
>gi|307720216|ref|YP_003891356.1| nitrogen-fixing NifU domain-containing protein [Sulfurimonas
autotrophica DSM 16294]
gi|306978309|gb|ADN08344.1| nitrogen-fixing NifU domain protein [Sulfurimonas autotrophica DSM
16294]
Length = 91
Score = 94.1 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD +++ +K V+D +VRP++A DGGDI F ++G V++ ++GAC GC S+ TL
Sbjct: 1 MIPFSDEELLEPVKHVID-KVRPSLALDGGDIDFITVKNGNVYVQLKGACIGCASSGSTL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
KYGV L + PE+ +
Sbjct: 60 KYGVERQLRMDIHPEITVV 78
>gi|295107477|emb|CBL05020.1| Thioredoxin-like proteins and domains [Gordonibacter pamelaeae
7-10-1-b]
Length = 78
Score = 93.7 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+ VL+ +RP++ DGGD+ F DG+V + ++GAC GCP + TL GV IL
Sbjct: 7 VAAVLE-LIRPSLQADGGDVRFVDVDEDGVVSVELQGACKGCPMSEMTLANGVERILKER 65
Query: 180 VPEVKDIRTV 189
VP V + V
Sbjct: 66 VPGVTKVVAV 75
>gi|299139675|ref|ZP_07032848.1| nitrogen-fixing NifU domain protein [Acidobacterium sp. MP5ACTX8]
gi|298598299|gb|EFI54464.1| nitrogen-fixing NifU domain protein [Acidobacterium sp. MP5ACTX8]
Length = 197
Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Query: 86 ISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY 145
G+ I++ D+ + D R+ +++ VRP + GGD G
Sbjct: 82 EEGERILNEALQDDLVSSMFLLHNLHPDDLET--RVLRGIES-VRPYLQEHGGDCELAGL 138
Query: 146 RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
+GIV L + G C CPS+S TLK V L P++K+I
Sbjct: 139 DNGIVRLRLHGNCGSCPSSSLTLKNAVEEALFQAAPDIKEIIA 181
>gi|88801953|ref|ZP_01117481.1| NifU-like protein [Polaribacter irgensii 23-P]
gi|88782611|gb|EAR13788.1| NifU-like protein [Polaribacter irgensii 23-P]
Length = 78
Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ ++ +++ L+ +RP + DGG+I DG+V + + GAC+GC TLK GV
Sbjct: 2 TTEETLENVEKALEE-IRPFLMSDGGNIKLLSIEDGVVKVQLEGACTGCSVNQMTLKNGV 60
Query: 173 ANILNHFVPEVKDIRTV 189
+ + P++ ++ V
Sbjct: 61 EATIKKYAPQIVEVINV 77
>gi|310643918|ref|YP_003948676.1| nifu-like protein [Paenibacillus polymyxa SC2]
gi|309248868|gb|ADO58435.1| NifU-like protein [Paenibacillus polymyxa SC2]
Length = 79
Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKY 170
++ + + + EVL ++RP + RDGGD +GI L GAC+GCPSA+ TLK
Sbjct: 1 MDENGVLFDEVSEVLL-KLRPFLLRDGGDAELVEVENGIAKLRFLGACNGCPSATITLKV 59
Query: 171 GVANILNHFVPEVKDIRTV 189
+ + + ++K++ V
Sbjct: 60 AIERAILEEIDDIKEVVQV 78
>gi|218289813|ref|ZP_03494013.1| nitrogen-fixing NifU domain protein [Alicyclobacillus
acidocaldarius LAA1]
gi|258510957|ref|YP_003184391.1| nitrogen-fixing NifU domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|218240104|gb|EED07289.1| nitrogen-fixing NifU domain protein [Alicyclobacillus
acidocaldarius LAA1]
gi|257477683|gb|ACV58002.1| nitrogen-fixing NifU domain protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 81
Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASET 167
+ ++ RI+E +++ +R A+ +DGGD+ F Y D V++S++GAC GCP++ T
Sbjct: 1 MMSDVTSTEARIREAIES-IREAIQQDGGDVEFVSYDDLSKTVYVSLQGACVGCPASVMT 59
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
LK G+ + P+V+ + V
Sbjct: 60 LKMGIERAVKKVAPDVEYVEAV 81
>gi|83645334|ref|YP_433769.1| thioredoxin-like protein [Hahella chejuensis KCTC 2396]
gi|83633377|gb|ABC29344.1| Thioredoxin-like protein [Hahella chejuensis KCTC 2396]
Length = 192
Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 36/77 (46%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
+ S + RI +L + P +A GG++ D + L G C GC + TLK G
Sbjct: 103 DESSPLPDRINYILYTEINPGLASHGGEVSLVEVVDDVAVLKFGGGCQGCSAVDFTLKQG 162
Query: 172 VANILNHFVPEVKDIRT 188
V L +PE+K +R
Sbjct: 163 VEKTLLSKIPELKGVRD 179
>gi|283768905|ref|ZP_06341815.1| NifU-like domain protein [Bulleidia extructa W1219]
gi|283104458|gb|EFC05832.1| NifU-like domain protein [Bulleidia extructa W1219]
Length = 100
Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+++RI+ LD ++RP + DGGD G+ DG V +SM GAC GC TL G+ I
Sbjct: 16 ELLKRIQHTLD-KIRPYIQADGGDCELVGFDDGTVIISMTGACQGCGIIDITLNDGIKAI 74
Query: 176 LNHFVPEVKDIR 187
L VPEVKD++
Sbjct: 75 LMDEVPEVKDVK 86
>gi|190575128|ref|YP_001972973.1| putative iron-sulphur cluster/NifU like protein [Stenotrophomonas
maltophilia K279a]
gi|254767331|sp|B2FM87|NFUA_STRMK RecName: Full=Fe/S biogenesis protein nfuA
gi|190013050|emb|CAQ46682.1| putative iron-sulphur cluster/NifU like protein [Stenotrophomonas
maltophilia K279a]
Length = 199
Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
G+ +++V+R+ V++N + P +A GG + + +G+V L G C GC A
Sbjct: 99 KGEAPGDAASLVERVHWVVENEINPQLASHGGKVAVQEVSAEGVVLLRFGGGCQGCGMAD 158
Query: 166 ETLKYGVANILNHFVPEVKDIRT 188
TLK G+ L VP V +R
Sbjct: 159 VTLKQGIEKTLMGRVPGVTAVRD 181
>gi|187250677|ref|YP_001875159.1| thioredoxin-like protein [Elusimicrobium minutum Pei191]
gi|186970837|gb|ACC97822.1| Thioredoxin-like protein [Elusimicrobium minutum Pei191]
Length = 74
Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVAN 174
+ +I+EV+ +++P + DGGD+ F + + G V++S++G C GCP+A TLK +
Sbjct: 1 MHSKIEEVI-AKIKPVLQADGGDLEFVSFDENTGTVYVSLKGRCGGCPAAQMTLKAVIER 59
Query: 175 ILNHFVPEVKDIRTV 189
+ +PEVK + V
Sbjct: 60 KIMQEIPEVKAVERV 74
>gi|124009117|ref|ZP_01693800.1| conserved domain protein [Microscilla marina ATCC 23134]
gi|123985331|gb|EAY25251.1| conserved domain protein [Microscilla marina ATCC 23134]
Length = 84
Score = 93.7 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLK 169
+++ +++R+ LD +RP + DGGD+ DG+V L + G+C CP ++ TLK
Sbjct: 1 MDTTIDMIERVDNALDT-IRPYLKTDGGDVKVLEVSEDGVVKLELMGSCGSCPMSAMTLK 59
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ + VPE+ + +
Sbjct: 60 AGIEESIRKAVPEITAVEAI 79
>gi|148244538|ref|YP_001219232.1| hypothetical protein COSY_0386 [Candidatus Vesicomyosocius okutanii
HA]
gi|254767332|sp|A5CX22|NFUA_VESOH RecName: Full=Fe/S biogenesis protein nfuA
gi|146326365|dbj|BAF61508.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii
HA]
Length = 192
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 102 LDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSG 160
G+ + D+ + ++IK V+ + P +A GG + G I V L+ G C G
Sbjct: 93 TAPNAKGEEPKEDAPLEEKIKYVIAADITPGLASHGGFVELVGITKQIDVILNFGGGCQG 152
Query: 161 CPSASETLKYGVANILNHFVPEVKDIRTV 189
C S TL+ GV L PE+K +R V
Sbjct: 153 CSSVKSTLEQGVEAQLKARFPEIKSVRDV 181
>gi|242308908|ref|ZP_04808063.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239524572|gb|EEQ64438.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 81
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
F+ SD +++ ++ V++ +VRP + DGG++ +G V++ + GAC GCPS+S+TL
Sbjct: 1 MFVFSDQELLKPVEMVIE-KVRPMLINDGGNVTLLKIENGKVYVRLEGACKGCPSSSQTL 59
Query: 169 KYGVANILNHFV-PEVK 184
K+G+ L + + P+++
Sbjct: 60 KFGIERALKNEIHPDIE 76
>gi|256827894|ref|YP_003156622.1| nitrogen-fixing NifU domain-containing protein [Desulfomicrobium
baculatum DSM 4028]
gi|256577070|gb|ACU88206.1| nitrogen-fixing NifU domain protein [Desulfomicrobium baculatum DSM
4028]
Length = 73
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +++++ LD VRP + DGG + GIV + M GAC GCP A TLK +
Sbjct: 1 MREQVEKALDT-VRPILQADGGYVELVNILPSGIVQVRMSGACKGCPMAQMTLKSSIERA 59
Query: 176 LNHFVPEVKDIRTV 189
+ VP +K + V
Sbjct: 60 VKKMVPGIKAVEAV 73
>gi|42525980|ref|NP_971078.1| NifU domain-containing protein [Treponema denticola ATCC 35405]
gi|41816030|gb|AAS10959.1| NifU domain protein [Treponema denticola ATCC 35405]
Length = 75
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 121 IKEVLDN---RVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANIL 176
+KE ++ VRP + DGGDI + G V++ ++GAC CP A TLK GV L
Sbjct: 3 VKEEIEKGIALVRPYLQADGGDIELDSVDEAGKVYVKLKGACGSCPMAIYTLKMGVEEQL 62
Query: 177 NHFVPEVKDIRTV 189
PEV ++ V
Sbjct: 63 KDMFPEVTEVVAV 75
>gi|325954760|ref|YP_004238420.1| nitrogen-fixing NifU domain-containing protein [Weeksella virosa
DSM 16922]
gi|323437378|gb|ADX67842.1| nitrogen-fixing NifU domain-containing protein [Weeksella virosa
DSM 16922]
Length = 93
Score = 93.3 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
++ ++ + + LD +RP + DGGDI +D +V + ++GAC+ C TLK GV
Sbjct: 2 NTELIDNVHKALDE-IRPFLNSDGGDIELVEVKDNVVKVRLKGACTSCSVNQMTLKAGVE 60
Query: 174 NILNHFVPEVKDIRTV 189
+ FVPE+ + V
Sbjct: 61 TTVKKFVPEIIKVIDV 76
>gi|154148473|ref|YP_001407292.1| NifU family protein [Campylobacter hominis ATCC BAA-381]
gi|153804482|gb|ABS51489.1| NifU family protein [Campylobacter hominis ATCC BAA-381]
Length = 88
Score = 93.3 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD +++ +++ LD +RP + +DGGD+ G ++ +V++ ++GAC GC ++++TL
Sbjct: 1 MIPFSDDELIEPVQKSLD-LIRPMLQKDGGDLELLGIKNAVVYVRLKGACHGCSASAQTL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
KYGV L + PE+ +
Sbjct: 60 KYGVERQLKIDIHPEISVV 78
>gi|2688826|gb|AAB88877.1| putative NifU protein [Prunus armeniaca]
Length = 76
Score = 92.9 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
V + VL++ VRP + DGGD+ DG+V L ++GAC CPS++ T+K G+
Sbjct: 1 ELTVPNVDLVLED-VRPYLIADGGDVDVVSVEDGVVSLKLQGACGSCPSSTTTMKMGIER 59
Query: 175 ILNHFVPE-VKDIRTV 189
+L + +KDI+ V
Sbjct: 60 VLKEKFGDALKDIQQV 75
>gi|224064633|ref|XP_002301529.1| predicted protein [Populus trichocarpa]
gi|222843255|gb|EEE80802.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 92.9 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLS 153
G + + + +++ VRP + DGG++ DG++ L
Sbjct: 47 TAIKATAPTGSSSPGLYSAQQFELNPQNVDLVLEEVRPYLIADGGNVDVVSVEDGVISLK 106
Query: 154 MRGACSGCPSASETLKYGVANILNHFVPE-VKDIRTV 189
++GAC CPS++ T+K G+ +L + +KDIR V
Sbjct: 107 LQGACGDCPSSTTTMKMGIERVLKEKFGDAIKDIRQV 143
Score = 43.6 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 9/89 (10%)
Query: 101 KLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSG 160
+ D+ ES V+R+ LD +RPA+ GG + +G + G
Sbjct: 136 AIKDIRQVSDEESKETTVERVNGHLDI-LRPAITNFGGSVEVLSVENGECRVQYTG---- 190
Query: 161 CPSASETLKYGVANILNHFVPEVKDIRTV 189
P + G+ + P++ D+ V
Sbjct: 191 -PESIA---SGIKAAIKEKFPDIVDVVFV 215
>gi|313206297|ref|YP_004045474.1| nitrogen-fixing nifu domain protein [Riemerella anatipestifer DSM
15868]
gi|312445613|gb|ADQ81968.1| nitrogen-fixing NifU domain protein [Riemerella anatipestifer DSM
15868]
gi|315023020|gb|EFT36033.1| Nitrogen-fixing NifU, C-terminal [Riemerella anatipestifer RA-YM]
gi|325336260|gb|ADZ12534.1| Thioredoxin-like protein [Riemerella anatipestifer RA-GD]
Length = 78
Score = 92.9 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++++ R++ L++ +RP + +DGGDI D +V++ + G CSGCP + T+K GV
Sbjct: 2 ENNSLEVRVENALES-IRPFLNKDGGDIELIKIEDTVVYVKLLGNCSGCPVSFSTMKLGV 60
Query: 173 ANILNHFVPEVKDIRTV 189
N + VPE+ + V
Sbjct: 61 ENTVKEKVPEITRVENV 77
>gi|257790861|ref|YP_003181467.1| nitrogen-fixing NifU domain-containing protein [Eggerthella lenta
DSM 2243]
gi|317488428|ref|ZP_07946981.1| NifU-like domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|325831888|ref|ZP_08164985.1| NifU-like protein [Eggerthella sp. HGA1]
gi|257474758|gb|ACV55078.1| nitrogen-fixing NifU domain protein [Eggerthella lenta DSM 2243]
gi|316912472|gb|EFV34028.1| NifU-like domain-containing protein [Eggerthella sp. 1_3_56FAA]
gi|325486209|gb|EGC88661.1| NifU-like protein [Eggerthella sp. HGA1]
Length = 77
Score = 92.9 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+ VL+ +RP++ DGGD+ DG+V + ++GAC GCP + TL GV IL
Sbjct: 7 VAAVLE-LIRPSLQADGGDVRLVDVNEDGVVSVELQGACKGCPMSQMTLANGVERILKER 65
Query: 180 VPEVKDI 186
VP V +
Sbjct: 66 VPGVTKV 72
>gi|162448199|ref|YP_001621331.1| NifU-like domain-containing protein [Acholeplasma laidlawii PG-8A]
gi|161986306|gb|ABX81955.1| NifU-like domain protein [Acholeplasma laidlawii PG-8A]
Length = 77
Score = 92.9 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ +++ +++ RVRP + RDGGDI DGIV++ M GAC GC + TLK G+ ++
Sbjct: 6 MTEQVGQII-KRVRPYIQRDGGDIELVNIEDGIVYVKMGGACDGCAAIDITLKQGIETMM 64
Query: 177 NHFVPEVKDIRTV 189
VP + + TV
Sbjct: 65 LENVPGIIAVVTV 77
>gi|237752984|ref|ZP_04583464.1| NifU family protein [Helicobacter winghamensis ATCC BAA-430]
gi|229375251|gb|EEO25342.1| NifU family protein [Helicobacter winghamensis ATCC BAA-430]
Length = 81
Score = 92.9 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD+ +++ ++ +D +VRP + +DGG++ +G V++ + GAC GCPS+++TLK+G+
Sbjct: 5 SDTELLKPVEASID-KVRPMLIKDGGNVTLIKIENGKVYVRLEGACKGCPSSTQTLKFGI 63
Query: 173 ANILNHFV-PEVK 184
L + P+++
Sbjct: 64 ERTLKDDIHPDIE 76
>gi|225010130|ref|ZP_03700602.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-3C]
gi|225005609|gb|EEG43559.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-3C]
Length = 79
Score = 92.9 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
++Q++++ LD +RP + DGGDI +G V + + GAC GC TLK GV
Sbjct: 4 DELLQQVEKALDE-IRPFLQSDGGDIALEGIEGNTVKVRLMGACVGCSVNQMTLKSGVEL 62
Query: 175 ILNHFVPEVKDI 186
+ + P+++ +
Sbjct: 63 TIKKYAPQIEQV 74
>gi|110637337|ref|YP_677544.1| hypothetical protein CHU_0925 [Cytophaga hutchinsonii ATCC 33406]
gi|110280018|gb|ABG58204.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
Length = 86
Score = 92.9 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYG 171
++ ++ R+++ L++ +RP + DGG++ D IV L + GAC CP ++ TLK G
Sbjct: 6 ENTELLDRVEQALES-IRPYLITDGGNVRLVEITEDMIVKLELLGACGTCPMSAMTLKAG 64
Query: 172 VANILNHFVPEVKDIRTV 189
V + VPE+K + +
Sbjct: 65 VEESIRKAVPEIKGVFAI 82
>gi|68349029|gb|AAY96420.1| YhgI [Halomonas elongata]
Length = 196
Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYG 171
+DS + R+ VL + + P +A GG+I + + L+ G C GC + TLK G
Sbjct: 107 ADSPLEDRVNYVLYSEINPGLAAHGGEIKLVQLTEEQVAVLAFGGGCQGCAAVDLTLKEG 166
Query: 172 VANILNHFVPEVKDIRTV 189
V L +PE+ IR V
Sbjct: 167 VERTLMERIPELSGIRDV 184
>gi|304408198|ref|ZP_07389847.1| nitrogen-fixing NifU domain protein [Paenibacillus curdlanolyticus
YK9]
gi|304342886|gb|EFM08731.1| nitrogen-fixing NifU domain protein [Paenibacillus curdlanolyticus
YK9]
Length = 81
Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
S + + +VLD ++RP + RDGGD+ +GIV L + GAC CPS++ TLK G+
Sbjct: 7 STMYDEVLDVLD-KLRPFLQRDGGDVELVDVEEGIVKLRLVGACGSCPSSTITLKAGIER 65
Query: 175 IL 176
L
Sbjct: 66 AL 67
>gi|325475673|gb|EGC78849.1| NifU domain-containing protein [Treponema denticola F0402]
Length = 75
Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 121 IKEVLDN---RVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANIL 176
+KE ++ +RP + DGGDI + G V++ ++GAC CP A TLK GV L
Sbjct: 3 VKEEVEKGIALIRPYLQADGGDIELDSVDEAGKVYVKLKGACGSCPMAIYTLKMGVEEQL 62
Query: 177 NHFVPEVKDIRTV 189
PEV ++ V
Sbjct: 63 KDMFPEVTEVVAV 75
>gi|319891909|ref|YP_004148784.1| Nitrogen-fixing NifU domain protein [Staphylococcus
pseudintermedius HKU10-03]
gi|317161605|gb|ADV05148.1| Nitrogen-fixing NifU domain protein [Staphylococcus
pseudintermedius HKU10-03]
gi|323465000|gb|ADX77153.1| nitrogen fixation protein NifU [Staphylococcus pseudintermedius
ED99]
Length = 80
Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ + ++ EV++ ++RP + RDGGD DGIV L + GAC CPS++ TLK G+
Sbjct: 4 ENATMYDQVAEVIE-KLRPFLLRDGGDCELVDVEDGIVKLQLLGACGTCPSSTITLKAGI 62
Query: 173 ANIL 176
L
Sbjct: 63 ERAL 66
>gi|223948699|gb|ACN28433.1| unknown [Zea mays]
Length = 221
Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Query: 86 ISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY 145
SG G + + + VLD+ VRP + DGG++
Sbjct: 43 TSGSRACLVAASASTPPAPGGGLYSAATYELTPENVDRVLDD-VRPYLISDGGNVTVVAV 101
Query: 146 RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE-VKDIRTV 189
DG++ L + GAC CPS++ T+ G+ +L + K+IR V
Sbjct: 102 EDGVISLKLEGACGSCPSSTTTMNMGIERVLKEKFGDAFKEIRQV 146
>gi|226493520|ref|NP_001152596.1| LOC100286236 [Zea mays]
gi|195657915|gb|ACG48425.1| NFU3 [Zea mays]
Length = 221
Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Query: 86 ISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY 145
SG G + + + VLD+ VRP + DGG++
Sbjct: 43 TSGSRACLVAASASTPPAPGGGLYSAATYELTPENVDRVLDD-VRPYLISDGGNVTVVAV 101
Query: 146 RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE-VKDIRTV 189
DG++ L + GAC CPS++ T+ G+ +L + K+IR V
Sbjct: 102 EDGVISLKLEGACGSCPSSTTTMNMGIERVLKEKFGDAFKEIRQV 146
>gi|75910119|ref|YP_324415.1| Fe-S cluster assembly protein NifU [Anabaena variabilis ATCC 29413]
gi|7387938|sp|Q43885|NIFU_ANAAZ RecName: Full=Nitrogen fixation protein nifU
gi|762779|gb|AAA87250.1| NifU gene product [Anabaena azollae]
gi|75703844|gb|ABA23520.1| Fe-S cluster assembly protein NifU [Anabaena variabilis ATCC 29413]
Length = 300
Score = 92.5 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 77 VLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE-SDSAVVQRIKEVLDNRVRPAVAR 135
+ +I + + N G + SG ++ + I++VLD VRP +
Sbjct: 187 IDDIIKDVKENKAATNLNNKGGSKPTNIPNSGQKRPLTNVQKIALIQKVLDEEVRPVLIA 246
Query: 136 DGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV-PEVKDIRTV 189
DGGD+ IV + ++GAC C S++ TLK + + L + P + + V
Sbjct: 247 DGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRINPSLV-VEAV 300
>gi|17228950|ref|NP_485498.1| nitrogen fixation protein [Nostoc sp. PCC 7120]
gi|128316|sp|P20628|NIFU_ANASP RecName: Full=Nitrogen fixation protein nifU
gi|97707|pir||D34443 nitrogen fixation protein nifU - Anabaena sp
gi|142038|gb|AAA22007.1| nifU [Nostoc sp. PCC 7120]
gi|17130802|dbj|BAB73412.1| nitrogen fixation protein [Nostoc sp. PCC 7120]
Length = 300
Score = 92.5 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Query: 77 VLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE-SDSAVVQRIKEVLDNRVRPAVAR 135
+ +I + + N G + SG ++ + I++VLD VRP +
Sbjct: 187 IDDIIKDVKENKAATNLNNKGGSKPTNIPNSGQKRPLTNVQKIALIQKVLDEEVRPVLIA 246
Query: 136 DGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV-PEVKDIRTV 189
DGGD+ IV + ++GAC C S++ TLK + + L + P + + V
Sbjct: 247 DGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRINPSLV-VEAV 300
>gi|302335395|ref|YP_003800602.1| nitrogen-fixing NifU domain protein [Olsenella uli DSM 7084]
gi|301319235|gb|ADK67722.1| nitrogen-fixing NifU domain protein [Olsenella uli DSM 7084]
Length = 85
Score = 92.5 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKY 170
E+ + + + + E + +R ++ DGGD+ G+ +G+V L M+GAC+GCP +S +
Sbjct: 4 ETKTPINRELLEATLDVIRQSLQADGGDVALVGFNDEGVVTLEMQGACAGCPLSSLDMSE 63
Query: 171 GVANILNHFVPEVKDIRT 188
G+ IL VP V +
Sbjct: 64 GIERILKEHVPGVTKVEP 81
>gi|284162204|ref|YP_003400827.1| nitrogen-fixing NifU domain protein [Archaeoglobus profundus DSM
5631]
gi|284012201|gb|ADB58154.1| nitrogen-fixing NifU domain protein [Archaeoglobus profundus DSM
5631]
Length = 77
Score = 92.5 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVAN 174
+ ++++EV++ +RP + DGG+I + GIV + + GAC GCP A TL V
Sbjct: 3 LREKVEEVVNKEIRPYLMADGGNIAVVDVDEKEGIVKVKLMGACYGCPMAQITLTAFVEQ 62
Query: 175 ILNHFVPEVKDIRTV 189
L +PEVK + V
Sbjct: 63 HLKSRIPEVKKVIPV 77
>gi|312890429|ref|ZP_07749966.1| nitrogen-fixing NifU domain protein [Mucilaginibacter paludis DSM
18603]
gi|311297199|gb|EFQ74331.1| nitrogen-fixing NifU domain protein [Mucilaginibacter paludis DSM
18603]
Length = 92
Score = 92.2 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANI 175
++ +++ LD +RP + DGG++ + D +V L + G+C CP + TLK G+
Sbjct: 3 ILDQVEAALDT-IRPYLETDGGNVSVEEITADNVVKLKLLGSCGSCPMSIMTLKAGIEQA 61
Query: 176 LNHFVPEVKDIRTV 189
+ VPEV + +
Sbjct: 62 IKKAVPEVTGVEAI 75
>gi|75910444|ref|YP_324740.1| Fe-S cluster assembly protein NifU [Anabaena variabilis ATCC 29413]
gi|1236928|gb|AAA93019.1| NifU2 [Anabaena variabilis ATCC 29413]
gi|75704169|gb|ABA23845.1| Fe-S cluster assembly protein NifU [Anabaena variabilis ATCC 29413]
Length = 309
Score = 92.2 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 1/115 (0%)
Query: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE-SDSAVVQRIKEVLDNRVRPAVA 134
+ +I P+ + L + + + I++VLD VRP +
Sbjct: 185 DIDDLISAVIKESAPVGTSYKLSTQIAATTQKQSPRQLTTVQKIALIQKVLDEEVRPLLI 244
Query: 135 RDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
DGGDI + V + ++GAC CPS++ TLK V L V + + V
Sbjct: 245 ADGGDIELYDVQGDNVQVVLQGACGSCPSSTATLKVAVEAKLQERVSQSLRVEAV 299
>gi|291333447|gb|ADD93149.1| nitrogen fixing NifU-like protein [uncultured archaeon
MedDCM-OCT-S05-C57]
Length = 160
Score = 92.2 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 14/149 (9%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I+ E T +P +F+ VL + F + +PLA R+ ++P IA V +T
Sbjct: 8 IRGEPTADPQKCRFVLEAEVLSRSPVSFDRESDTSKAPLAERLLALPYIAGVSISGSAVT 67
Query: 63 VGKDQYD-WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRI 121
+ D + W + + G+I E +G+P + + D+ + ++
Sbjct: 68 LTGDNVESWPAIGKEIGGVIREQIKTGEPAVEEEVMDI-------------GDADLFTQV 114
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIV 150
++ N V P++A GG I DG
Sbjct: 115 NLLIKNDVNPSIASHGGTITLHSVNDGKA 143
>gi|256827631|ref|YP_003151590.1| thioredoxin-like protein [Cryptobacterium curtum DSM 15641]
gi|256583774|gb|ACU94908.1| thioredoxin-like protein [Cryptobacterium curtum DSM 15641]
Length = 75
Score = 92.2 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ + VL+ VRP++ DGGD+ DG V + ++GAC GCP + TL +G+ IL
Sbjct: 5 EDVAAVLE-LVRPSLQADGGDVRLVDVMEDGTVTVELQGACQGCPMSQMTLAHGIERILK 63
Query: 178 HFVPEVKDI 186
VP V+ +
Sbjct: 64 DRVPGVQQV 72
>gi|303290897|ref|XP_003064735.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453761|gb|EEH51069.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 153
Score = 92.2 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ +++VLD VRP + DGGD+ +V L + GAC CPS++ T++ G+
Sbjct: 2 ELTAENVEKVLDE-VRPYLIADGGDVELVEIDGLVVRLKLNGACGSCPSSTVTMRMGIER 60
Query: 175 ILNHFVPEV 183
L +PE+
Sbjct: 61 RLLEVIPEI 69
Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ + E + +RP + GG + + IV + + G ++ T++ V
Sbjct: 83 ELNEANVEATLDEIRPYLKGTGGGELELVDIEEPIVKIKLSGP----AASVMTVRVAVTQ 138
Query: 175 ILNHFVPEVKDIR 187
L +P + ++
Sbjct: 139 KLREKMPSIAAVQ 151
>gi|21674600|ref|NP_662665.1| NifU protein, putative [Chlorobium tepidum TLS]
gi|21647799|gb|AAM73007.1| nifU protein, putative [Chlorobium tepidum TLS]
Length = 83
Score = 92.2 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASET 167
D++ + ++ L+ VRP + DGGD G +D +V + + GAC CP ++ T
Sbjct: 3 DYLPKTDPLYDKVISALET-VRPYLQVDGGDCQLVGITKDMVVDVKLLGACGSCPMSTLT 61
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
L+ GV + PE+ + +V
Sbjct: 62 LRAGVEQAIKKANPEIVRVESV 83
>gi|319760689|ref|YP_004124627.1| Fe/S biogenesis protein nfuA [Candidatus Blochmannia vafer str.
BVAF]
gi|318039403|gb|ADV33953.1| Fe/S biogenesis protein nfuA [Candidatus Blochmannia vafer str.
BVAF]
Length = 202
Score = 92.2 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 79 GMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGG 138
+I + + I + I ++S++ RIK V+ ++ P +A GG
Sbjct: 80 DIITDDLRTQITIQSPNLTNSIDNPSDNINKKITNNSSLTDRIKYVITQQINPQLAMHGG 139
Query: 139 DIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
+ DG+ L G C+GC A T+K G+ L F PE+K +
Sbjct: 140 SVSLIKVNTDGMAILQFHGGCNGCSMALYTIKEGIEKTLKKFFPELKGVID 190
>gi|21231527|ref|NP_637444.1| hypothetical protein XCC2079 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768417|ref|YP_243179.1| hypothetical protein XC_2103 [Xanthomonas campestris pv. campestris
str. 8004]
gi|51702176|sp|Q8P8Z9|NFUA_XANCP RecName: Full=Fe/S biogenesis protein nfuA
gi|81305609|sp|Q4UUW4|NFUA_XANC8 RecName: Full=Fe/S biogenesis protein nfuA
gi|21113208|gb|AAM41368.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573749|gb|AAY49159.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 199
Score = 92.2 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
G+ +++V+R++ V++N + P +A GG + + +G+V L G C GC A
Sbjct: 99 KGEAPAESASMVERVRWVVENEINPQLASHGGRVAVQEVSAEGVVLLRFGGGCHGCGMAD 158
Query: 166 ETLKYGVANILNHFVPEVKDIRT 188
TLK G+ L +P V +R
Sbjct: 159 VTLKQGIEKTLMGRLPGVIAVRD 181
>gi|257456257|ref|ZP_05621454.1| NifU-like domain protein [Treponema vincentii ATCC 35580]
gi|257446343|gb|EEV21389.1| NifU-like domain protein [Treponema vincentii ATCC 35580]
Length = 75
Score = 92.2 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
V +K+ LD VRP + DGGD+ F DG+V + ++GAC CP A TLK G+
Sbjct: 3 TVDEVKQALD-VVRPHLQADGGDVEFVSLSDDGVVSVRLKGACGSCPVALMTLKSGIEAQ 61
Query: 176 LNHFVPEVKDIRTV 189
L P++K + ++
Sbjct: 62 LKESYPDIKKVVSI 75
>gi|164688813|ref|ZP_02212841.1| hypothetical protein CLOBAR_02460 [Clostridium bartlettii DSM
16795]
gi|164602289|gb|EDQ95754.1| hypothetical protein CLOBAR_02460 [Clostridium bartlettii DSM
16795]
Length = 73
Score = 92.2 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +++ VLD +VRP + RDGGD+ DG+V + ++GACSGCP A+ TLK + N+
Sbjct: 1 MKEQVAAVLD-KVRPVLQRDGGDVELVEVSDDGVVLVRLKGACSGCPGATMTLKAVIENL 59
Query: 176 LNHFVPEVKDIRTV 189
L VP V + V
Sbjct: 60 LVKEVPGVTRVVGV 73
>gi|257453557|ref|ZP_05618847.1| IscR-regulated protein YhgI [Enhydrobacter aerosaccus SK60]
gi|257449015|gb|EEV23968.1| IscR-regulated protein YhgI [Enhydrobacter aerosaccus SK60]
Length = 205
Score = 92.2 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 59/166 (35%), Gaps = 17/166 (10%)
Query: 38 ISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGG 96
+ RIF PG + ++++ + L+ P + +
Sbjct: 29 TDGIGVRIFVEHPGTPRAECCMSY--SQPNEHNPDDLKLDYETFTAYIDTPSIPYLEDAV 86
Query: 97 LGDMKLDDMGSGDFIE---------SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-- 145
+ K G F ++++ +RI VL + + P +A GG++
Sbjct: 87 IDYNKDRFGGQLTFRAPNSKVPKLGENASLEERINYVLSSEINPNLASHGGNVQLVDLVH 146
Query: 146 RDGI---VFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
+G+ L G C GC + TLK GV L +PE+ +
Sbjct: 147 EEGVGITAVLKFGGGCQGCSAVDMTLKQGVEVSLKQQIPELTQVID 192
>gi|92114011|ref|YP_573939.1| HesB/YadR/YfhF [Chromohalobacter salexigens DSM 3043]
gi|91797101|gb|ABE59240.1| HesB/YadR/YfhF [Chromohalobacter salexigens DSM 3043]
Length = 196
Score = 92.2 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 48/123 (39%), Gaps = 11/123 (8%)
Query: 78 LGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES----------DSAVVQRIKEVLDN 127
L I + + D D MG I++ DS + R+ VL +
Sbjct: 62 LDKITVYLEKNSIAFLEEAVVDFNADRMGGQLTIKAPNAKMPKVNADSPLEDRVNYVLYS 121
Query: 128 RVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+ P +A GG+I + + L G C GC + TLK GV L VPE+ I
Sbjct: 122 EINPGLAAHGGEIRLMQLTEENVAVLQFGGGCQGCAAVDLTLKEGVEKTLIERVPELAGI 181
Query: 187 RTV 189
R V
Sbjct: 182 RDV 184
>gi|836637|emb|CAA83509.1| nifU [Nostoc sp. PCC 6720]
gi|1091584|prf||2021269A dinitrogenase reductase
Length = 87
Score = 92.2 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ + I++VLD VRP + DGGD+ IV + ++GAC C S++ TLK +
Sbjct: 10 TNVQKIALIQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAI 69
Query: 173 ANILNHFV-PEVKDIRTV 189
+ L + P + + V
Sbjct: 70 ESRLRDRINPSLVVVEAV 87
>gi|188991774|ref|YP_001903784.1| Thioredoxin-like protein [Xanthomonas campestris pv. campestris
str. B100]
gi|254767335|sp|B0RTH4|NFUA_XANCB RecName: Full=Fe/S biogenesis protein nfuA
gi|167733534|emb|CAP51738.1| Thioredoxin-like protein [Xanthomonas campestris pv. campestris]
Length = 199
Score = 92.2 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
G+ +++V+ ++ V++N + P +A GG + + +G+V L G C GC A
Sbjct: 99 KGEAPAESASMVECVRWVVENEINPQLASHGGRVAVQEVSAEGVVLLRFGGGCHGCGMAD 158
Query: 166 ETLKYGVANILNHFVPEVKDIRT 188
TLK G+ L VP V +R
Sbjct: 159 VTLKQGIEKTLMGRVPGVIAVRD 181
>gi|307108673|gb|EFN56913.1| hypothetical protein CHLNCDRAFT_144603 [Chlorella variabilis]
Length = 149
Score = 91.8 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
++ + ++ VLD VRP + DGG++ F +V+L + GAC CPS+ T+ G
Sbjct: 16 DTLELTEENVETVLDE-VRPYLMADGGNVEFVEIDGPVVYLRLAGACGSCPSSLTTMTMG 74
Query: 172 VANILNHFVP 181
+ L +P
Sbjct: 75 IKRRLMERIP 84
Score = 39.8 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 6/54 (11%)
Query: 137 GGDIVFKGYRDGIVFLSMRGACSGCPSAS-ETLKYGVANILNHFVPEVKDIRTV 189
GG + I + + G P+A+ T++ V L +P + ++ V
Sbjct: 100 GGGLELVELDGPIAKVRITG-----PAANVMTVRVAVTQKLRERIPAIAAVQLV 148
>gi|254514377|ref|ZP_05126438.1| IscR-regulated protein YhgI [gamma proteobacterium NOR5-3]
gi|219676620|gb|EED32985.1| IscR-regulated protein YhgI [gamma proteobacterium NOR5-3]
Length = 196
Score = 91.8 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 62/182 (34%), Gaps = 13/182 (7%)
Query: 18 PGQVVLVEGAIHFSNAKEAEISPLASRIF-SIPGIASVYFGYDFITVGKDQYDWEHLRPP 76
P + + + + L R+F + PG A + + + ++ P
Sbjct: 5 PMLTITESAQDYLAELLAKQEDALGVRVFINEPGTARAETCIAYC--REGDISEDDVKHP 62
Query: 77 VLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE---------SDSAVVQRIKEVLDN 127
+ P + + + G DS + RI +L N
Sbjct: 63 FEKITAWFDGRSVPFLEDALVDYSTDRMGGQLTIKAPNAKMPRVSDDSPIEDRINYLLYN 122
Query: 128 RVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
V P++A GG++ D L G C GC + TLK GV L +P++K +
Sbjct: 123 EVNPSLAAHGGEVSLVEVTEDAYAVLRFGGGCQGCSAVDMTLKDGVEKTLLDQLPQLKGV 182
Query: 187 RT 188
R
Sbjct: 183 RD 184
>gi|88703284|ref|ZP_01101000.1| HesB/YadR/YfhF family protein [Congregibacter litoralis KT71]
gi|88701998|gb|EAQ99101.1| HesB/YadR/YfhF family protein [Congregibacter litoralis KT71]
Length = 191
Score = 91.8 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYG 171
DS + RI VL N V P++A GG++ D L G C GC + TLK G
Sbjct: 103 DDSPIEDRINYVLYNEVNPSLAAHGGEVSLVEVTDDAFAVLRFGGGCQGCSAVDMTLKDG 162
Query: 172 VANILNHFVPEVKDIRT 188
V L +P++K +R
Sbjct: 163 VEKTLLDQLPQLKGVRD 179
>gi|67922888|ref|ZP_00516385.1| Aminotransferase, class V:Nitrogen-fixing NifU, C-terminal
[Crocosphaera watsonii WH 8501]
gi|67855238|gb|EAM50500.1| Aminotransferase, class V:Nitrogen-fixing NifU, C-terminal
[Crocosphaera watsonii WH 8501]
Length = 469
Score = 91.8 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 13/115 (11%)
Query: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVAR 135
++ I+ H S P I + + I+++L+ V+P +A+
Sbjct: 367 EIVPDIISHLRSITPRIEDETTSSPTKE-----------QEKANLIQQILEEEVKPFLAQ 415
Query: 136 DGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV-PEVKDIRTV 189
DGGDI +V + ++GAC CPS++ TLK + L V PE+ + V
Sbjct: 416 DGGDIDLYDIEGDLVKVVLKGACDACPSSTATLKLAIEARLKDRVDPELT-VIAV 469
>gi|150016970|ref|YP_001309224.1| NifU domain-containing protein [Clostridium beijerinckii NCIMB
8052]
gi|149903435|gb|ABR34268.1| nitrogen-fixing NifU domain protein [Clostridium beijerinckii NCIMB
8052]
Length = 93
Score = 91.8 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++ I V++ +++P +A GDI +G+ ++ + GACSGCPSA T++ ++ +L
Sbjct: 5 MIDEINNVINTKIKPLLAEHNGDIELVEVNNGVAYVKLLGACSGCPSARFTMEELISCVL 64
Query: 177 NHFVPEVKDIRTV 189
+PE+KD++ V
Sbjct: 65 KE-IPEIKDVQLV 76
>gi|285018390|ref|YP_003376101.1| protein gnty [Xanthomonas albilineans GPE PC73]
gi|283473608|emb|CBA16111.1| probable protein gnty [Xanthomonas albilineans]
Length = 198
Score = 91.4 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
G+ +++V+R++ V++N V P +A GG + + DG+V L G C GC A
Sbjct: 98 KGEAPGEAASLVERVRWVVENEVNPQLAEHGGRVAVQEVSADGVVVLRFGGGCHGCGMAD 157
Query: 166 ETLKYGVANILNHFVPEVKDIRT 188
TLK G+ L V V +R
Sbjct: 158 VTLKQGIEKTLMGRVSGVTAVRD 180
>gi|57168801|ref|ZP_00367932.1| nifU protein homolog Cj1639 [Campylobacter coli RM2228]
gi|305432457|ref|ZP_07401619.1| NifU family protein [Campylobacter coli JV20]
gi|57019848|gb|EAL56531.1| nifU protein homolog Cj1639 [Campylobacter coli RM2228]
gi|304444496|gb|EFM37147.1| NifU family protein [Campylobacter coli JV20]
Length = 90
Score = 91.4 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD ++ +K LD + P + RDGG + F G ++G+V++ + GAC GC S+ TL
Sbjct: 1 MMPFSDEELINPVKASLDKSM-PMLERDGGGLEFLGIKNGVVYVHLIGACKGCASSGTTL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
KYG+ L + PE+ +
Sbjct: 60 KYGLERQLKIDIHPEITIV 78
>gi|307105277|gb|EFN53527.1| hypothetical protein CHLNCDRAFT_58507 [Chlorella variabilis]
Length = 496
Score = 91.4 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V+ + LD+ VRP + DGG++ DG VFL ++GAC CPS++ T+K G+ L
Sbjct: 340 TVEAVDAALDD-VRPYLIADGGNVDVVAVEDGRVFLQLQGACGTCPSSTATMKMGIERSL 398
Query: 177 NHFVP-EVKDIRTV 189
++ ++ V
Sbjct: 399 KAAFGKQLVEVLQV 412
>gi|323436167|ref|ZP_01051062.2| NifU-like protein [Dokdonia donghaensis MED134]
gi|321496482|gb|EAQ38213.2| NifU-like protein [Dokdonia donghaensis MED134]
Length = 88
Score = 91.4 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASET 167
+ S + + Q++++ L+ +RP + DGGDI G D +V + ++GAC GC T
Sbjct: 6 ELSMSTAELTQKVEDALEE-IRPFLQSDGGDISLLGIDDDRVVRVQLQGACVGCSVNQMT 64
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
LK GV + P+++ + V
Sbjct: 65 LKSGVEMTIKKHAPQIEQVINV 86
>gi|34558002|ref|NP_907817.1| hypothetical protein WS1690 [Wolinella succinogenes DSM 1740]
gi|34483720|emb|CAE10717.1| conserved hypothetical protein-Thioredoxin-like proteins and
domains [Wolinella succinogenes]
Length = 91
Score = 91.4 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
F SD +++ ++ VL+ +VRP +A DGGD+ G V++ + GAC GC S++ TL
Sbjct: 1 MFPFSDDDLLKPVERVLE-KVRPTLALDGGDVSLIGVAAPKVYVRLEGACKGCASSALTL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
K G+ + + PE++ +
Sbjct: 60 KNGIERQMRLEIHPEIEIV 78
>gi|254282987|ref|ZP_04957955.1| IscR-regulated protein YhgI [gamma proteobacterium NOR51-B]
gi|219679190|gb|EED35539.1| IscR-regulated protein YhgI [gamma proteobacterium NOR51-B]
Length = 191
Score = 91.4 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKY 170
+ DS + RI +L N V P++A GG++ + L G C GC + TLK
Sbjct: 102 DPDSPIEDRINYILYNEVNPSLAAHGGEVSLVEVTDEKYAILRFGGGCQGCSAVDVTLKD 161
Query: 171 GVANILNHFVPEVKDIRT 188
GV L +PE+ +R
Sbjct: 162 GVEKTLVEQLPELTGVRD 179
>gi|223984131|ref|ZP_03634283.1| hypothetical protein HOLDEFILI_01575 [Holdemania filiformis DSM
12042]
gi|223963925|gb|EEF68285.1| hypothetical protein HOLDEFILI_01575 [Holdemania filiformis DSM
12042]
Length = 82
Score = 91.4 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ ++K V++ ++RP + RDGGD+ F DGIV + M GACS C S TLK G+
Sbjct: 2 ETMETQVKNVIE-KIRPYIQRDGGDVEFVSLEDGIVTVKMLGACSECLSLDATLKDGIEA 60
Query: 175 ILNHFVPEVKDIR 187
IL VP V ++R
Sbjct: 61 ILLDEVPGVTEVR 73
>gi|254429726|ref|ZP_05043433.1| HesB-like domain protein [Alcanivorax sp. DG881]
gi|196195895|gb|EDX90854.1| HesB-like domain protein [Alcanivorax sp. DG881]
Length = 198
Score = 91.4 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYG 171
D+++ ++I VL + P +A GG + D + L G C GC TL+ G
Sbjct: 109 EDASIEEKINYVLYAEINPNLAAHGGSVQLLELTEDNVAVLEFGGGCQGCSVVDVTLRDG 168
Query: 172 VANILNHFVPEVKDIRT 188
V L +PE+ +R
Sbjct: 169 VEKTLQERIPELAGVRD 185
>gi|218438784|ref|YP_002377113.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7424]
gi|218171512|gb|ACK70245.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7424]
Length = 309
Score = 91.0 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
+ +RI++ LD VRP + GD+ V + + G CS CP+++
Sbjct: 88 HELIKPPQPPLEKRIQQALDE-VRPGLKSHNGDVELVAIELPDTVKVRLVGTCSNCPAST 146
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
T+K GV + ++ PE+ + ++
Sbjct: 147 LTMKQGVEQTIKNYCPEITQVISI 170
>gi|320526969|ref|ZP_08028158.1| NifU-like domain protein [Solobacterium moorei F0204]
gi|320132554|gb|EFW25095.1| NifU-like domain protein [Solobacterium moorei F0204]
Length = 109
Score = 91.0 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Query: 92 IHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVF 151
+ + D+ + + ++QRI+ LD ++RP + DGGD+ GY DG+V
Sbjct: 1 MSDTDFYSESSADLIALETDPVRKDLLQRIQHTLD-KIRPYIQADGGDVFLVGYADGVVT 59
Query: 152 LSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
++M GAC+GC TL G+ IL VPEV D+R
Sbjct: 60 VTMTGACNGCMVMDSTLNDGIKAILLDEVPEVHDVR 95
>gi|288574803|ref|ZP_06393160.1| nitrogen-fixing NifU domain protein [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288570544|gb|EFC92101.1| nitrogen-fixing NifU domain protein [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 77
Score = 91.0 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVAN 174
++ RI EV+D +RPA+ GGD+ + + G++ ++GAC CP A ETL+ V
Sbjct: 3 LIDRINEVVDKSIRPALQSHGGDVEVVSFDEESGVISARLQGACGTCPFAQETLRMQVEA 62
Query: 175 ILNHFVPEVKDI 186
+L +PEV +
Sbjct: 63 VLKREIPEVSSV 74
>gi|302784594|ref|XP_002974069.1| hypothetical protein SELMODRAFT_16558 [Selaginella moellendorffii]
gi|300158401|gb|EFJ25024.1| hypothetical protein SELMODRAFT_16558 [Selaginella moellendorffii]
Length = 170
Score = 91.0 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Query: 87 SGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR 146
S ++ + E+ + + +VLD VRP + DGG++
Sbjct: 1 SSREVVSPFESSNTSSTAGSGLYSAETYDFTAENVDKVLDE-VRPYLVADGGNVAVVSVA 59
Query: 147 DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE-VKDIRTV 189
DG V L ++ AC CPS++ T+K G+ +L + VK++ +
Sbjct: 60 DGTVSLELQRACGTCPSSTSTMKMGIERVLREKFGDAVKEVVDI 103
>gi|289643389|ref|ZP_06475510.1| iron-sulfur cluster assembly accessory protein [Frankia symbiont of
Datisca glomerata]
gi|289506787|gb|EFD27765.1| iron-sulfur cluster assembly accessory protein [Frankia symbiont of
Datisca glomerata]
Length = 198
Score = 91.0 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 85 FISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG 144
F+ +P + + + + +++ E + +VRP + RDGGD+
Sbjct: 94 FVFSNPRAADPCSCGSSFSADAAERQEGDEDTLWRQVDEAIQ-QVRPFLQRDGGDVTVVD 152
Query: 145 YRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
G+V + + GAC GC +A +TL + L VP V+ +
Sbjct: 153 ITAGVVSVRLTGACGGCSAALDTLTGVIERQLKESVPAVERV 194
>gi|4558563|gb|AAD22656.1|AC007138_20 putative NifU-like metallocluster assembly factor [Arabidopsis
thaliana]
gi|7268578|emb|CAB80687.1| putative NifU-like metallocluster assembly factor [Arabidopsis
thaliana]
Length = 174
Score = 91.0 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
Q + VL++ VRP + DGG++ DG+V L ++GAC+ CPS+S T+ G+
Sbjct: 83 DLTPQNVDLVLED-VRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIER 141
Query: 175 ILNHFVPE-VKDIRTV 189
+L + +KDIR V
Sbjct: 142 VLKEKFGDALKDIRQV 157
>gi|258404239|ref|YP_003196981.1| Fe-S cluster assembly protein NifU [Desulfohalobium retbaense DSM
5692]
gi|257796466|gb|ACV67403.1| Fe-S cluster assembly protein NifU [Desulfohalobium retbaense DSM
5692]
Length = 283
Score = 90.6 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ +Q + +V++ +RP++ +DGGDI V +++RG CSGCPS+ TLK V
Sbjct: 205 TNIQRMQLVNDVIEKEIRPSLQKDGGDIELIDIEGREVQVALRGMCSGCPSSQLTLKNVV 264
Query: 173 ANILNHFV-PEVK 184
L V PE+
Sbjct: 265 ERRLQERVEPEIT 277
>gi|325105698|ref|YP_004275352.1| nitrogen-fixing NifU domain protein [Pedobacter saltans DSM 12145]
gi|324974546|gb|ADY53530.1| nitrogen-fixing NifU domain protein [Pedobacter saltans DSM 12145]
Length = 89
Score = 90.6 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLK 169
+ES + ++ LD +RP + DGG++ + D +V L + GAC CP + TLK
Sbjct: 1 MESRDNLFNEVERALDT-IRPYLVADGGNVSVEEITNDNVVKLKLLGACGSCPMSFMTLK 59
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ + VP + + +
Sbjct: 60 AGIEQAVKKAVPSITAVEAI 79
>gi|46580957|ref|YP_011765.1| NifU family protein [Desulfovibrio vulgaris str. Hildenborough]
gi|46450377|gb|AAS97025.1| NifU family protein [Desulfovibrio vulgaris str. Hildenborough]
Length = 81
Score = 90.6 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLK 169
+ D + ++++ L VRP + +DGGD+ +G+V + + G C GCP + +TLK
Sbjct: 1 MSEDIPMRDKVEQAL-AIVRPLLQQDGGDVELVDITPEGVVRVRLTGRCKGCPMSQKTLK 59
Query: 170 YGVANILNHFVPEVKDIRTV 189
V ++ FVP V+ + V
Sbjct: 60 NSVEKMVLKFVPAVQRVEAV 79
>gi|260771979|ref|ZP_05880896.1| protein gntY [Vibrio metschnikovii CIP 69.14]
gi|260612846|gb|EEX38048.1| protein gntY [Vibrio metschnikovii CIP 69.14]
Length = 166
Score = 90.6 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 54/153 (35%), Gaps = 10/153 (6%)
Query: 46 FSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIME-----HFISGDPIIHNGGLGD 99
F + PG + G + + + ++ + + +G
Sbjct: 2 FVVNPGTQNAECGVSYCPPEAVEKTDTVIPFTDFSAYVDELSLPFLENAEIDFVTDKMGS 61
Query: 100 MKLDDMGSGDFI--ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRG 156
+ + D+ ++ R++ + +V P +A GG + +G+ L G
Sbjct: 62 QLTLKAPNAKMRKVDDDAPLMARVEYAIQTQVNPQLAGHGGHVSLVNITDEGVALLQFGG 121
Query: 157 ACSGCPSASETLKYGVAN-ILNHFVPEVKDIRT 188
C+GC TLK G+ +L F E+ +R
Sbjct: 122 GCNGCSMVDVTLKEGIEKELLAQFAGELTAVRD 154
>gi|110834051|ref|YP_692910.1| hypothetical protein ABO_1190 [Alcanivorax borkumensis SK2]
gi|110647162|emb|CAL16638.1| yhgI conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 198
Score = 90.6 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYG 171
D+ + ++I VL + P +A GG + D + L G C GC TL+ G
Sbjct: 109 EDATIEEKINYVLYAEINPNLAAHGGSVQLLELTDDNVAVLEFGGGCQGCSVVDVTLRDG 168
Query: 172 VANILNHFVPEVKDIRT 188
V L +PE+ +R
Sbjct: 169 VEKTLQERIPELAGVRD 185
>gi|126656503|ref|ZP_01727764.1| Fe-S cluster assembly protein NifU [Cyanothece sp. CCY0110]
gi|126622189|gb|EAZ92896.1| Fe-S cluster assembly protein NifU [Cyanothece sp. CCY0110]
Length = 293
Score = 90.6 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Query: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVAR 135
+ +I E + ++ S ++ + I++VL+ VRPA+A+
Sbjct: 184 DIDDLIAEIVQEKATAVAVA----TEVVKAKSESLPLTNLQKITLIQQVLEEEVRPALAQ 239
Query: 136 DGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV-PEVKDIRTV 189
DGGD+ +V + ++GAC CPS++ TLK + L V P++ + V
Sbjct: 240 DGGDVDLFDVDGDLVKVILKGACDSCPSSTATLKMAIEARLRDRVSPDLT-VIAV 293
>gi|289668991|ref|ZP_06490066.1| hypothetical protein XcampmN_10969 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 200
Score = 90.6 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVAR-DGGDIVFKGYR-DGIVFLSMRGACSGCPSA 164
G+ +++V+R++ V++N + P +A GG + + DG+V L G C GC A
Sbjct: 99 KGEAPAESASMVERVRWVVENEINPQLASSHGGRVAVQEVSADGVVLLRFGGGCHGCGMA 158
Query: 165 SETLKYGVANILNHFVPEVKDIRT 188
TLK G+ L VP V +R
Sbjct: 159 DVTLKQGIEKTLMGRVPGVIAVRD 182
>gi|50084252|ref|YP_045762.1| putative membrane-bound protein in GNT I transport system (GntY)
[Acinetobacter sp. ADP1]
gi|51701945|sp|Q6FDB8|NFUA_ACIAD RecName: Full=Fe/S biogenesis protein nfuA
gi|49530228|emb|CAG67940.1| putative membrane-bound protein in GNT I transport system (GntY)
[Acinetobacter sp. ADP1]
Length = 212
Score = 90.6 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 65/188 (34%), Gaps = 18/188 (9%)
Query: 17 IPGQVVLVEGAIHFSNAKEAEISP-LASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLR 74
IP ++ + + E + +P + RIF PG + D+ + +
Sbjct: 14 IPNLLITPSAQEYLGDLLEKQNTPGIGVRIFVENPGTPRAECCMAYSAP--DEVNPADYK 71
Query: 75 PPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES---------DSAVVQRIKEVL 125
P + + + K G F D+++ +RI +L
Sbjct: 72 QEYSDFPAYIDAPSIPYLLDAVIDYNKDRFGGQLTFRAPNSKVPRVGPDASIEERITYIL 131
Query: 126 DNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+ + P +A GG+ +D L G C GC + TLK GV L +
Sbjct: 132 QSEINPGLAGHGGNCALVEVQDDPENGLTAVLKFGGGCQGCSAIDVTLKQGVETTLRQQI 191
Query: 181 PEVKDIRT 188
PE++ +
Sbjct: 192 PELQRVVD 199
>gi|126641029|ref|YP_001084013.1| putative membrane-bound protein in GNT I transport system (GntY)
[Acinetobacter baumannii ATCC 17978]
Length = 156
Score = 90.6 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI VL + P +A GG+ +D L G C GC + TL
Sbjct: 64 DASIEERITYVLQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLKFGGGCQGCSAIDVTL 123
Query: 169 KYGVANILNHFVPEVKDIRT 188
K GV L +PE++ +
Sbjct: 124 KQGVETTLKEHIPELQRVVD 143
>gi|332292115|ref|YP_004430724.1| nitrogen-fixing NifU domain protein [Krokinobacter diaphorus
4H-3-7-5]
gi|332170201|gb|AEE19456.1| nitrogen-fixing NifU domain protein [Krokinobacter diaphorus
4H-3-7-5]
Length = 80
Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYGVA 173
+ + Q++++ L+ +RP + DGGDI G + IV + ++GAC GC TLK GV
Sbjct: 4 AELTQKVEDALEE-IRPFLQSDGGDITLLGIENDTIVRVQLQGACVGCSVNQMTLKSGVE 62
Query: 174 NILNHFVPEVKDIRTV 189
+ P+++++ V
Sbjct: 63 MTIKKHAPQIEEVINV 78
>gi|18411785|ref|NP_567219.1| NFU1; structural molecule [Arabidopsis thaliana]
gi|75163233|sp|Q93W77|NIFU1_ARATH RecName: Full=NifU-like protein 1, chloroplastic; Short=AtCNfu1;
Short=AtCnfU-IVb; Flags: Precursor
gi|14517434|gb|AAK62607.1| AT4g01940/T7B11_20 [Arabidopsis thaliana]
gi|15215670|gb|AAK91380.1| AT4g01940/T7B11_20 [Arabidopsis thaliana]
gi|20908090|gb|AAM26728.1| AT4g01940/T7B11_20 [Arabidopsis thaliana]
gi|28207816|emb|CAD55558.1| NFU1 protein [Arabidopsis thaliana]
gi|332656703|gb|AEE82103.1| NifU-like protein 1 [Arabidopsis thaliana]
Length = 231
Score = 90.6 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
Q + VL++ VRP + DGG++ DG+V L ++GAC+ CPS+S T+ G+
Sbjct: 84 DLTPQNVDLVLED-VRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIER 142
Query: 175 ILNHFVPE-VKDIRTV 189
+L + +KDIR V
Sbjct: 143 VLKEKFGDALKDIRQV 158
>gi|257459224|ref|ZP_05624343.1| NifU family protein [Campylobacter gracilis RM3268]
gi|257443609|gb|EEV18733.1| NifU family protein [Campylobacter gracilis RM3268]
Length = 88
Score = 90.2 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+D ++ +++ L+ +RP + DGGD+ G ++G+V++ + G C GC ++S+TL
Sbjct: 1 MIPFTDEELLAPVQDSLE-LIRPMLQNDGGDMKLLGIKNGVVYVRLTGHCHGCAASSQTL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
KYGV L + PE+ +
Sbjct: 60 KYGVERQLRMDIHPELSVV 78
>gi|224437749|ref|ZP_03658696.1| hypothetical protein HcinC1_07235 [Helicobacter cinaedi CCUG 18818]
gi|313144195|ref|ZP_07806388.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313129226|gb|EFR46843.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 86
Score = 90.2 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
F SD + ++ V+D +VRP + DGGDI G RD V++ + GAC GCPS++ TL
Sbjct: 1 MFPFSDEELQTPVELVID-KVRPTLTLDGGDITLLGIRDAKVYVRLEGACKGCPSSANTL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
KY + N L + P++ +
Sbjct: 60 KYAIENRLKEEIHPDIAIV 78
>gi|242041121|ref|XP_002467955.1| hypothetical protein SORBIDRAFT_01g037130 [Sorghum bicolor]
gi|241921809|gb|EER94953.1| hypothetical protein SORBIDRAFT_01g037130 [Sorghum bicolor]
Length = 222
Score = 90.2 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + + VLD+ VRP + DGG++ DG++ L + GAC CPS++ T+ G+
Sbjct: 71 TYELTPENVDRVLDD-VRPYLISDGGNVTVVAVEDGVISLKLEGACGSCPSSTTTMNMGI 129
Query: 173 ANILNHFVPE-VKDIRTV 189
+L + K+IR V
Sbjct: 130 ERVLKEKFGDAFKEIRQV 147
>gi|152993863|ref|YP_001359584.1| hypothetical protein SUN_2287 [Sulfurovum sp. NBC37-1]
gi|151425724|dbj|BAF73227.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 92
Score = 90.2 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+D + +K+V++ +VRP++ DGGDI +DG+V++ ++GAC GC SA T+
Sbjct: 1 MIPFTDEELEPAVKDVIE-KVRPSIKLDGGDIELVDIKDGVVYVQLQGACVGCGSAGTTI 59
Query: 169 KYGVANILNHFV-PEVKDIRTV 189
K+GV L + PE+ + +V
Sbjct: 60 KFGVERQLKTLIHPEIT-VMSV 80
>gi|255526287|ref|ZP_05393203.1| nitrogen-fixing NifU domain protein [Clostridium carboxidivorans
P7]
gi|296185211|ref|ZP_06853621.1| NifU-like domain protein [Clostridium carboxidivorans P7]
gi|255510000|gb|EET86324.1| nitrogen-fixing NifU domain protein [Clostridium carboxidivorans
P7]
gi|296050045|gb|EFG89469.1| NifU-like domain protein [Clostridium carboxidivorans P7]
Length = 96
Score = 90.2 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 43/73 (58%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++I++V++ +V+P + GDI F +GIV + + G CSGC SA T++ V +
Sbjct: 2 IEEKIQKVIEEKVKPYLREHNGDIKFLEIENGIVKVKLLGQCSGCVSAKYTVENIVEAAM 61
Query: 177 NHFVPEVKDIRTV 189
+PEV+ + +
Sbjct: 62 KEEIPEVERVELI 74
>gi|169796823|ref|YP_001714616.1| putative membrane-bound protein in GNT I transport system (GntY)
[Acinetobacter baumannii AYE]
gi|184157261|ref|YP_001845600.1| thioredoxin-like protein [Acinetobacter baumannii ACICU]
gi|213156785|ref|YP_002318446.1| IscR-regulated protein YhgI [Acinetobacter baumannii AB0057]
gi|215484301|ref|YP_002326528.1| Iron-sulphur cluster biosynthesis family protein [Acinetobacter
baumannii AB307-0294]
gi|239502990|ref|ZP_04662300.1| Iron-sulphur cluster biosynthesis family protein [Acinetobacter
baumannii AB900]
gi|260555913|ref|ZP_05828133.1| iron-sulphur cluster biosynthesis family protein [Acinetobacter
baumannii ATCC 19606]
gi|301346712|ref|ZP_07227453.1| Iron-sulphur cluster biosynthesis family protein [Acinetobacter
baumannii AB056]
gi|301511819|ref|ZP_07237056.1| Iron-sulphur cluster biosynthesis family protein [Acinetobacter
baumannii AB058]
gi|301594411|ref|ZP_07239419.1| Iron-sulphur cluster biosynthesis family protein [Acinetobacter
baumannii AB059]
gi|332853697|ref|ZP_08434927.1| IscR-regulated protein YhgI [Acinetobacter baumannii 6013150]
gi|332870876|ref|ZP_08439521.1| IscR-regulated protein YhgI [Acinetobacter baumannii 6013113]
gi|332872882|ref|ZP_08440846.1| IscR-regulated protein YhgI [Acinetobacter baumannii 6014059]
gi|254767282|sp|B7GXX8|NFUA_ACIB3 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767283|sp|B7I8Q3|NFUA_ACIB5 RecName: Full=Fe/S biogenesis protein nfuA
gi|254767284|sp|B2HVD2|NFUA_ACIBC RecName: Full=Fe/S biogenesis protein nfuA
gi|254767286|sp|B0V9L0|NFUA_ACIBY RecName: Full=Fe/S biogenesis protein nfuA
gi|254767504|sp|A3M3B7|NFUA_ACIBT RecName: Full=Fe/S biogenesis protein nfuA
gi|169149750|emb|CAM87641.1| putative membrane-bound protein in GNT I transport system (GntY)
[Acinetobacter baumannii AYE]
gi|183208855|gb|ACC56253.1| Thioredoxin-like protein [Acinetobacter baumannii ACICU]
gi|193076708|gb|ABO11411.2| putative membrane-bound protein in GNT I transport system (GntY)
[Acinetobacter baumannii ATCC 17978]
gi|213055945|gb|ACJ40847.1| IscR-regulated protein YhgI [Acinetobacter baumannii AB0057]
gi|213988281|gb|ACJ58580.1| Iron-sulphur cluster biosynthesis family protein [Acinetobacter
baumannii AB307-0294]
gi|260410824|gb|EEX04122.1| iron-sulphur cluster biosynthesis family protein [Acinetobacter
baumannii ATCC 19606]
gi|322507146|gb|ADX02600.1| thioredoxin-like protein [Acinetobacter baumannii 1656-2]
gi|323517125|gb|ADX91506.1| thioredoxin-like protein [Acinetobacter baumannii TCDC-AB0715]
gi|332728521|gb|EGJ59895.1| IscR-regulated protein YhgI [Acinetobacter baumannii 6013150]
gi|332731977|gb|EGJ63255.1| IscR-regulated protein YhgI [Acinetobacter baumannii 6013113]
gi|332738893|gb|EGJ69756.1| IscR-regulated protein YhgI [Acinetobacter baumannii 6014059]
Length = 212
Score = 90.2 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI VL + P +A GG+ +D L G C GC + TL
Sbjct: 120 DASIEERITYVLQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLKFGGGCQGCSAIDVTL 179
Query: 169 KYGVANILNHFVPEVKDIRT 188
K GV L +PE++ +
Sbjct: 180 KQGVETTLKEHIPELQRVVD 199
>gi|308807973|ref|XP_003081297.1| nitrogen fixation NifU-like family protein (ISS) [Ostreococcus
tauri]
gi|116059759|emb|CAL55466.1| nitrogen fixation NifU-like family protein (ISS) [Ostreococcus
tauri]
Length = 186
Score = 90.2 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 92 IHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVF 151
G + +D + S D + ++ + LD VRP + DGG++ DG++
Sbjct: 15 FATARAGAVAMDAVESAD-APTLELTMENVDAALDE-VRPYLIADGGNVELVTIDDGMIV 72
Query: 152 LSMRGACSGCPSASETLKYGVANILNHF----VPEVKDI 186
+ + GAC C S++ T+K G+ +L V EV ++
Sbjct: 73 VRLNGACGTCASSTATMKGGIEKLLKQKFGAAVDEVVNV 111
>gi|268323348|emb|CBH36936.1| conserved hypothetical protein, NifU-like domain family [uncultured
archaeon]
Length = 87
Score = 90.2 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANI 175
+++ +K V++ +RP + +GG I KG D G+V + + GAC+GCP + TL V
Sbjct: 1 MLEEVKGVIEKDIRPLLEMEGGSIELKGVDDDGVVRVQLTGACAGCPMSQYTLVNFVEAT 60
Query: 176 LNHFVPEVKDIRT 188
L VP VK +
Sbjct: 61 LKDKVPGVKQVVA 73
>gi|326336739|ref|ZP_08202907.1| NifU family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325691209|gb|EGD33180.1| NifU family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 80
Score = 90.2 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYG 171
++ +++R++ L +RP + DGGDI G D IV + + G+C C TL+ G
Sbjct: 2 NNPDLLKRVETALAE-IRPYLQNDGGDISLVGIEDNKIVKVHLLGSCLNCSVNQMTLRSG 60
Query: 172 VANILNHFVPEVKDIRTV 189
V ++ + PE++ + +V
Sbjct: 61 VEMMIKKYAPEIEKVISV 78
>gi|186680943|ref|YP_001864139.1| Fe-S cluster assembly protein NifU [Nostoc punctiforme PCC 73102]
gi|186463395|gb|ACC79196.1| Fe-S cluster assembly protein NifU [Nostoc punctiforme PCC 73102]
Length = 299
Score = 90.2 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 77 VLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARD 136
+ + E+ P ++N G+ + + + S + ++ + I++VLD VRP + D
Sbjct: 191 IRSVQQEYAS---PALNNYGV-QVATEIVTSKERSLTNVQKIALIQKVLDEEVRPVLIAD 246
Query: 137 GGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
GGD+ V + ++GAC C S++ TLK + L V + + V
Sbjct: 247 GGDVELYDVEGDRVKVVLQGACGSCSSSTATLKIAIEARLQDRVSKSLVVEAV 299
>gi|260551205|ref|ZP_05825408.1| iron-sulphur cluster biosynthesis family protein [Acinetobacter sp.
RUH2624]
gi|260405810|gb|EEW99299.1| iron-sulphur cluster biosynthesis family protein [Acinetobacter sp.
RUH2624]
Length = 212
Score = 89.9 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI VL + P +A GG+ +D L G C GC + TL
Sbjct: 120 DASIEERITYVLQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLKFGGGCQGCSAIDVTL 179
Query: 169 KYGVANILNHFVPEVKDIRT 188
K GV L +PE++ +
Sbjct: 180 KQGVETTLREHIPELQRVVD 199
>gi|303233008|ref|ZP_07319687.1| NifU-like protein [Atopobium vaginae PB189-T1-4]
gi|302480879|gb|EFL43960.1| NifU-like protein [Atopobium vaginae PB189-T1-4]
Length = 178
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
Query: 83 EHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVF 142
+ + +PI + G+ + + + I E + +R ++ DGGD+V
Sbjct: 72 DPAQATNPIDAAASCATSGDNATTPGERV----PINREILEATIDVIRESLQADGGDVVL 127
Query: 143 KGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
DG+V L M GAC+GCP + + G+ IL VP V +
Sbjct: 128 VNVSDDGVVTLEMTGACAGCPLSEYDMTEGIERILKEHVPGVTKVEP 174
>gi|262279919|ref|ZP_06057704.1| IscR-regulated protein YhgI [Acinetobacter calcoaceticus RUH2202]
gi|262260270|gb|EEY79003.1| IscR-regulated protein YhgI [Acinetobacter calcoaceticus RUH2202]
Length = 212
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI +L + P +A GG+ +D L G C GC + TL
Sbjct: 120 DASIEERITYILQAEINPGLAGHGGNCSLVEVQDNPEHGLTAVLKFGGGCQGCSAIDVTL 179
Query: 169 KYGVANILNHFVPEVKDIRT 188
K GV L +PE++ +
Sbjct: 180 KQGVETTLREHIPELQRVVD 199
>gi|269928406|ref|YP_003320727.1| nitrogen-fixing NifU domain-containing protein [Sphaerobacter
thermophilus DSM 20745]
gi|269787763|gb|ACZ39905.1| nitrogen-fixing NifU domain protein [Sphaerobacter thermophilus DSM
20745]
Length = 290
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 14/131 (10%)
Query: 72 HLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD-------------SAVV 118
LR LG I E + + D E + V
Sbjct: 30 ELRDQALGAIQELLAFYGDGLGRALAILVARDPTLPAALAEDELVAHILLLHGLHPVPVE 89
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+R+ + LD RVRP + GGD+ DG+ + +RG C GCP+++ TL+ + ++
Sbjct: 90 ERVGQALD-RVRPYLHSHGGDVDLLEIVDGVARVRLRGTCRGCPASAVTLRLAIERAVHE 148
Query: 179 FVPEVKDIRTV 189
P++ I V
Sbjct: 149 LAPDLDGIEAV 159
>gi|417363|sp|P33179|NIFU_ANASL RecName: Full=Nitrogen fixation protein nifU
gi|2126543|pir||I39609 nifU protein - Anabaena sp. (fragment)
gi|142056|gb|AAA22013.1| NifU [Anabaena sp. L-31]
Length = 112
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Query: 79 GMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE-SDSAVVQRIKEVLDNRVRPAVARDG 137
+I + N ++ + SG ++ + I++VLD VRP + DG
Sbjct: 1 DIIKDVKEKNAVTNLNTKGVNLTKEIANSGQKRALTNVQKIALIQKVLDEEVRPVLIADG 60
Query: 138 GDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV-PEVKDIRTV 189
GD+ IV + ++GAC CPS++ TLK + + L + P + + V
Sbjct: 61 GDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIESRLRDRINPSLV-VEAV 112
>gi|224419202|ref|ZP_03657208.1| hypothetical protein HcanM9_08008 [Helicobacter canadensis MIT
98-5491]
gi|253828131|ref|ZP_04871016.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313142706|ref|ZP_07804899.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253511537|gb|EES90196.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313131737|gb|EFR49354.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 81
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD +++ ++ V+D +VRP + DGG++ +G V++ + GAC GCPS+S+TLK+G+
Sbjct: 5 SDQKLLKPVEIVID-KVRPMLINDGGNVTLLKIENGKVYVRLEGACKGCPSSSKTLKFGI 63
Query: 173 ANILNHFV-PEVK 184
+ L + + P+++
Sbjct: 64 ESALKNEIHPDIE 76
>gi|312880024|ref|ZP_07739824.1| nitrogen-fixing NifU domain protein [Aminomonas paucivorans DSM
12260]
gi|310783315|gb|EFQ23713.1| nitrogen-fixing NifU domain protein [Aminomonas paucivorans DSM
12260]
Length = 76
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVAN 174
+ QR+ +V+ ++RP + GGDI FKG+ + G V +++ GAC GCP A ETL+ V
Sbjct: 1 MEQRVLQVIQEQIRPNLQAHGGDIEFKGFDEVEGAVTVALTGACGGCPFAQETLRVQVEQ 60
Query: 175 ILNHFVPEVKDIR 187
+L +PEVK +R
Sbjct: 61 VLRAAIPEVKSVR 73
>gi|228473254|ref|ZP_04058008.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
33624]
gi|228275156|gb|EEK13954.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
33624]
Length = 79
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYG 171
++ ++QR++ L +RP + DGGDI G D IV + + G+C C TLK G
Sbjct: 2 NNPDLLQRVETALAE-IRPYLQNDGGDISLIGIEDDKIVKVKLLGSCLSCSVNQMTLKSG 60
Query: 172 VANILNHFVPEVKDIRTV 189
V + + PE++ + +
Sbjct: 61 VEMTIKKYAPEIEKVVNI 78
>gi|87121388|ref|ZP_01077277.1| yhgI protein [Marinomonas sp. MED121]
gi|86163231|gb|EAQ64507.1| yhgI protein [Marinomonas sp. MED121]
Length = 193
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYG 171
DS + +I VL + + P +A GG++ ++G I L G C GC + TLK G
Sbjct: 105 EDSPLEDQINYVLYSDINPGLASHGGEVSLVEIKEGNIAVLQFGGGCQGCSAVDLTLKEG 164
Query: 172 VANILNHFVPEVKDIRT 188
V L VP +K ++
Sbjct: 165 VEKTLIEKVPALKGVQD 181
>gi|298490557|ref|YP_003720734.1| Fe-S cluster assembly protein NifU ['Nostoc azollae' 0708]
gi|298232475|gb|ADI63611.1| Fe-S cluster assembly protein NifU ['Nostoc azollae' 0708]
Length = 306
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V I++VLD VRP + DGGD+ V + ++GAC C S++ TLK + + L
Sbjct: 233 VALIQKVLDEEVRPVLIADGGDVELYDVEGDKVKVVLQGACGSCSSSTATLKIAIESRLR 292
Query: 178 HFVPEVKDIRTV 189
+ + + V
Sbjct: 293 DRISKEIIVEAV 304
>gi|57238650|ref|YP_179781.1| NifU family protein [Campylobacter jejuni RM1221]
gi|121612278|ref|YP_001001282.1| NifU family protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|148925779|ref|ZP_01809467.1| nifU protein like protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|153951478|ref|YP_001398916.1| NifU family protein [Campylobacter jejuni subsp. doylei 269.97]
gi|167006176|ref|ZP_02271934.1| NifU family protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|218563228|ref|YP_002345008.1| NifU protein [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|283957025|ref|ZP_06374497.1| NifU family protein [Campylobacter jejuni subsp. jejuni 1336]
gi|2960001|emb|CAA76497.1| hypothetical protein [Campylobacter jejuni]
gi|57167454|gb|AAW36233.1| NifU family protein [Campylobacter jejuni RM1221]
gi|112360935|emb|CAL35736.1| NifU protein homolog [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|121504156|gb|EAQ72687.2| NifU family protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|145845789|gb|EDK22880.1| nifU protein like protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|152938924|gb|ABS43665.1| NifU family protein [Campylobacter jejuni subsp. doylei 269.97]
gi|283791526|gb|EFC30323.1| NifU family protein [Campylobacter jejuni subsp. jejuni 1336]
gi|284926833|gb|ADC29185.1| NifU family protein [Campylobacter jejuni subsp. jejuni IA3902]
gi|315059089|gb|ADT73418.1| NifU-like protein [Campylobacter jejuni subsp. jejuni S3]
gi|315927611|gb|EFV06942.1| nifU-like domain protein [Campylobacter jejuni subsp. jejuni
DFVF1099]
Length = 90
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD ++ +K L+ + P + RDGG + F G ++GIV++ + GAC GC S+ TL
Sbjct: 1 MMPFSDEELINPVKASLEKSL-PMLERDGGGLEFLGIKNGIVYVHLIGACKGCASSGTTL 59
Query: 169 KYGVANILNHFV-PEVK 184
KYG+ L + PE+
Sbjct: 60 KYGLERQLKIDIHPEIT 76
>gi|332970567|gb|EGK09554.1| Fe/S-biogenesis protein NfuA [Psychrobacter sp. 1501(2011)]
Length = 216
Score = 89.9 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 53/136 (38%), Gaps = 14/136 (10%)
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE---------SDSAV 117
+ D L+ P S P + + + K G F +D++V
Sbjct: 68 EEDEADLQLPFEAFTAYIEASSVPYLEDAVIDYNKDRFGGQLTFRAPNSKVPKVGADASV 127
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGI---VFLSMRGACSGCPSASETLKYGV 172
+RI VL + + P++A GGD+ +G+ L G C GC + TL+ GV
Sbjct: 128 EERINYVLQSEINPSLAAHGGDVQLLELIEEEGVGLTAVLKFGGGCQGCSAVDMTLRQGV 187
Query: 173 ANILNHFVPEVKDIRT 188
L +PE+ +
Sbjct: 188 EVQLKQQIPELTQVVD 203
>gi|94676599|ref|YP_588921.1| yhgI protein [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
gi|254767291|sp|Q1LSZ3|NFUA_BAUCH RecName: Full=Fe/S biogenesis protein nfuA
gi|94219749|gb|ABF13908.1| yhgI protein [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
Length = 190
Score = 89.5 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 64/171 (37%), Gaps = 18/171 (10%)
Query: 31 SNAKEAEISPLASRIFSI-PGIASVYFGYDFI---TVGKDQYDWEHLRPPV--LGMIMEH 84
+ + S R+ + PG + TV K + ++ + ++
Sbjct: 13 TTLLAKQKSGTQIRVLVLNPGTPIAECSLSYCPIDTVTK-----KDIKLEFDQFCVYVDQ 67
Query: 85 FISG------DPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGG 138
+ + + + + + I+S++ +++R+ +++ + + P +A GG
Sbjct: 68 LSTSYLEDALIDCVLDELGTQLIIQAPHLIEKIDSNTPLLERVNQIILSCINPQLANHGG 127
Query: 139 DIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
+ D + G C+GC S TLK + L PE+K ++
Sbjct: 128 KVTLITITEDMFAIIQFSGGCNGCSMVSYTLKEHIEKKLLQLFPELKGVKD 178
>gi|86149351|ref|ZP_01067582.1| NifU family protein [Campylobacter jejuni subsp. jejuni CF93-6]
gi|86152315|ref|ZP_01070526.1| NifU family protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|86152773|ref|ZP_01070978.1| NifU family protein [Campylobacter jejuni subsp. jejuni HB93-13]
gi|88596032|ref|ZP_01099269.1| NifU family protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|85840133|gb|EAQ57391.1| NifU family protein [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85840804|gb|EAQ58055.1| NifU family protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|85843658|gb|EAQ60868.1| NifU family protein [Campylobacter jejuni subsp. jejuni HB93-13]
gi|88190873|gb|EAQ94845.1| NifU family protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|315928875|gb|EFV08137.1| nifU-like domain protein [Campylobacter jejuni subsp. jejuni 305]
Length = 89
Score = 89.5 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD ++ +K L+ + P + RDGG + F G ++GIV++ + GAC GC S+ TLKYG+
Sbjct: 4 SDEELINPVKASLEKSL-PMLERDGGGLEFLGIKNGIVYVHLIGACKGCASSGTTLKYGL 62
Query: 173 ANILNHFV-PEVK 184
L + PE+
Sbjct: 63 ERQLKIDIHPEIT 75
>gi|241890053|ref|ZP_04777351.1| Fe/S biogenesis protein NfuA [Gemella haemolysans ATCC 10379]
gi|241863675|gb|EER68059.1| Fe/S biogenesis protein NfuA [Gemella haemolysans ATCC 10379]
Length = 84
Score = 89.5 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
V++IK L+ ++RP + DGG+I F Y+DGI+ + G C+ C + TLKY +
Sbjct: 7 ETVEKIKFELE-KIRPKLIMDGGNIEFINYKDGILKVRFLGECAHCELSHITLKYAIEKT 65
Query: 176 LNHFVPEVKDIRTV 189
L +PE+K + V
Sbjct: 66 LIEKIPEIKKVLQV 79
>gi|282901488|ref|ZP_06309413.1| Fe-S cluster assembly protein NifU [Cylindrospermopsis raciborskii
CS-505]
gi|281193767|gb|EFA68739.1| Fe-S cluster assembly protein NifU [Cylindrospermopsis raciborskii
CS-505]
Length = 308
Score = 89.5 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ + I++VLD VRP + DGGD+ V + ++GAC C S++ TLK +
Sbjct: 232 TNVQKIALIQKVLDEEVRPVLIADGGDVELYDIEGNKVKVILKGACGSCSSSTATLKIAI 291
Query: 173 ANILNHFVPEVKDIRTV 189
+ L V + + V
Sbjct: 292 ESRLRERVNKEIIVEAV 308
>gi|157415859|ref|YP_001483115.1| NifU family protein [Campylobacter jejuni subsp. jejuni 81116]
gi|157386823|gb|ABV53138.1| NifU-like protein [Campylobacter jejuni subsp. jejuni 81116]
gi|307748496|gb|ADN91766.1| NifU family protein [Campylobacter jejuni subsp. jejuni M1]
gi|315931685|gb|EFV10646.1| nifU-like domain protein [Campylobacter jejuni subsp. jejuni 327]
Length = 90
Score = 89.5 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD ++ +K L+ + P + RDGG + F G ++G+V++ + GAC GC S+ TL
Sbjct: 1 MMPFSDEELINPVKASLEKSL-PMLERDGGGLEFLGIKNGVVYVHLIGACKGCASSGTTL 59
Query: 169 KYGVANILNHFV-PEVK 184
KYG+ L + PE+
Sbjct: 60 KYGLERQLKIDIHPEIT 76
>gi|255069975|ref|XP_002507069.1| iron-sulfur cluster scaffold protein, plastid precursor [Micromonas
sp. RCC299]
gi|226522344|gb|ACO68327.1| iron-sulfur cluster scaffold protein, plastid precursor [Micromonas
sp. RCC299]
Length = 393
Score = 89.5 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
V+ + L N VRP +A DGGD+ G DGIV + M GAC C S++ TLK G+
Sbjct: 239 ELTVENVDAAL-NEVRPFLAADGGDVEVVGIEDGIVAVRMFGACGTCSSSTATLKGGIEA 297
Query: 175 IL-----NHFVPEVKDIRT 188
L + EV ++
Sbjct: 298 TLFKVFGREAIKEVVNLDQ 316
>gi|330837803|ref|YP_004412444.1| nitrogen-fixing NifU domain-containing protein [Spirochaeta
coccoides DSM 17374]
gi|329749706|gb|AEC03062.1| nitrogen-fixing NifU domain-containing protein [Spirochaeta
coccoides DSM 17374]
Length = 78
Score = 89.5 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++IKE ++ +RPA+ DGGDI F D V + + GAC+GCP A TLK GV L
Sbjct: 1 MQEQIKEAIE-AIRPAIQNDGGDIEFVQLDDNKVIVRLTGACAGCPMAKMTLKGGVERYL 59
Query: 177 NHFV-PEVKDI 186
+H V P++ +
Sbjct: 60 HHAVSPDLVIV 70
>gi|152996366|ref|YP_001341201.1| HesB/YadR/YfhF-family protein [Marinomonas sp. MWYL1]
gi|150837290|gb|ABR71266.1| HesB/YadR/YfhF-family protein [Marinomonas sp. MWYL1]
Length = 193
Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIV-FLSMRGACSGCPSASETLKYG 171
+DS + +I VL + + P +A GG++ DG V L G C GC + TLK G
Sbjct: 105 ADSPIEDQINYVLYSDINPGLAAHGGEVSLLEVIDGKVAVLKFGGGCQGCSAVDLTLKEG 164
Query: 172 VANILNHFVPEVKDIRT 188
V L VP + ++
Sbjct: 165 VEKTLMEKVPGLTAVKD 181
>gi|113476874|ref|YP_722935.1| nitrogen-fixing NifU-like protein [Trichodesmium erythraeum IMS101]
gi|110167922|gb|ABG52462.1| nitrogen-fixing NifU-like [Trichodesmium erythraeum IMS101]
Length = 173
Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 74 RPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ-RIKEVLDNRVRPA 132
+ + +I P + ++ + + ++ + ++ RI++ LD VRP
Sbjct: 51 KEALTRLIRSVKKESMPALREAVQDEVVYGLLRYHELVKPPTPPLEIRIQQALDE-VRPG 109
Query: 133 VARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+ GD+ G + V + + G CS CP+++ T+K GV + PE+K++ +V
Sbjct: 110 LQSHNGDVELVGIKLPDTVEVKLVGNCSNCPASTLTMKDGVEQAIKTHCPEIKNVVSV 167
>gi|323343211|ref|ZP_08083442.1| Fe/S-biogenesis protein NfuA [Erysipelothrix rhusiopathiae ATCC
19414]
gi|322463275|gb|EFY08470.1| Fe/S-biogenesis protein NfuA [Erysipelothrix rhusiopathiae ATCC
19414]
Length = 79
Score = 89.1 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +RI E LD ++RP + RDGGD+ F +G+V + + GAC GC TLK GV +
Sbjct: 3 LEERIIESLD-KIRPYIQRDGGDMEFVSVDENGVVTVKLLGACIGCGLIDYTLKGGVEAL 61
Query: 176 LNHFVPEVKDIRT 188
L +PEV +
Sbjct: 62 LMDEIPEVTGVIA 74
>gi|222526228|ref|YP_002570699.1| Rieske (2Fe-2S) domain-containing protein [Chloroflexus sp.
Y-400-fl]
gi|222450107|gb|ACM54373.1| Rieske (2Fe-2S) domain protein [Chloroflexus sp. Y-400-fl]
Length = 285
Score = 89.1 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ + R + VLD+ RP + GGD RDG+ +L + G+C+GC ++ TL+ V
Sbjct: 89 ADPITRARRVLDS-ARPYMQSHGGDAELIDVRDGVAYLRLHGSCNGCSLSAFTLRKHVEE 147
Query: 175 ILNHFVPEVKDIRTV 189
+L VPE+ + V
Sbjct: 148 VLLREVPEITRLEVV 162
>gi|119509287|ref|ZP_01628437.1| nitrogen fixation protein [Nodularia spumigena CCY9414]
gi|119466129|gb|EAW47016.1| nitrogen fixation protein [Nodularia spumigena CCY9414]
Length = 312
Score = 89.1 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 5/114 (4%)
Query: 77 VLGMIMEHFISGD-PIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVAR 135
+ +I + P ++ + ++ + I++VLD VRP +
Sbjct: 201 IDDIIRDVKEKAAVPALNTHSVAVANSQQSKPL----TNVQRIALIQKVLDEEVRPVLIA 256
Query: 136 DGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
DGGD+ V + ++GAC C S++ TLK + L V + + V
Sbjct: 257 DGGDVELYDVEGDKVKVVLQGACGSCSSSTATLKIAIEARLQDRVSKNLVVEAV 310
>gi|163848313|ref|YP_001636357.1| Rieske (2Fe-2S) domain-containing protein [Chloroflexus aurantiacus
J-10-fl]
gi|163669602|gb|ABY35968.1| Rieske (2Fe-2S) domain protein [Chloroflexus aurantiacus J-10-fl]
Length = 293
Score = 89.1 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ + R + VLD+ RP + GGD RDG+ +L + G+C+GC ++ TL+ V
Sbjct: 97 ADPITRARRVLDS-ARPYMQSHGGDAELIDVRDGVAYLRLHGSCNGCSLSAFTLRKHVEE 155
Query: 175 ILNHFVPEVKDIRTV 189
+L VPE+ + V
Sbjct: 156 VLLREVPEITRLEVV 170
>gi|315453542|ref|YP_004073812.1| nifU protein-like protein [Helicobacter felis ATCC 49179]
gi|315132594|emb|CBY83222.1| nifU protein homolog [Helicobacter felis ATCC 49179]
Length = 89
Score = 89.1 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD + + +++ L+ +VRP + RDGGD+V G ++ V++S+ GAC GC S++ TLK+G+
Sbjct: 4 SDQELQKPVEKALE-KVRPMLLRDGGDVVLLGIKNAKVYVSLEGACKGCASSANTLKFGI 62
Query: 173 ANILNHFV-PEVKDI 186
L + P+++ +
Sbjct: 63 ERCLQEEIHPDMQVV 77
>gi|323483740|ref|ZP_08089120.1| nitrogen-fixing NifU domain-containing protein [Clostridium
symbiosum WAL-14163]
gi|323692707|ref|ZP_08106936.1| nitrogen-fixing NifU domain-containing protein [Clostridium
symbiosum WAL-14673]
gi|323402931|gb|EGA95249.1| nitrogen-fixing NifU domain-containing protein [Clostridium
symbiosum WAL-14163]
gi|323503261|gb|EGB19094.1| nitrogen-fixing NifU domain-containing protein [Clostridium
symbiosum WAL-14673]
Length = 118
Score = 89.1 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG--IVFLSMRGACSGCPSASETLKYGV 172
+ +++RI++VL+ VRP++ G++ Y + I+ + + G CSGCPSA T + +
Sbjct: 2 AEMIERIEKVLEQDVRPSLLSHEGNVQIVSYEEKSKILRVRLTGQCSGCPSAQLTTEEVI 61
Query: 173 ANILNHFVPEVKDIRTV 189
+ +PEV+ + V
Sbjct: 62 EKAVKEKIPEVEQVLLV 78
>gi|268326215|emb|CBH39803.1| conserved hypothetical protein, containing NifU-like domain
[uncultured archaeon]
Length = 87
Score = 89.1 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANI 175
+++ ++ V++ +RP + GG I +G D G+V + + GAC+GCP + TL V
Sbjct: 1 MLEEVEGVIEKDIRPLLEMQGGSIELEGVDDDGVVKVRLTGACAGCPMSQFTLVNFVEAT 60
Query: 176 LNHFVPEVKDIRT 188
L VP VK +
Sbjct: 61 LKDKVPGVKQVVA 73
>gi|118602435|ref|YP_903650.1| NifU domain-containing protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|254767316|sp|A1AW72|NFUA_RUTMC RecName: Full=Fe/S biogenesis protein nfuA
gi|118567374|gb|ABL02179.1| nitrogen-fixing NifU domain protein [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
Length = 192
Score = 89.1 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Query: 83 EHFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNRVRPAVARDGGDI 140
E+ + + + G G + E D+ + ++IK V+ + P +A GG +
Sbjct: 72 EYLKDSEVALKDAGTGKKLTITAPNTKGKEPKEDAPLEEKIKYVIAANINPGLASHGGFV 131
Query: 141 VFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+ V L+ G C GC S TL+ GV L PE+K +R V
Sbjct: 132 ELVEITKHMDVILNFGGGCQGCSSVKSTLEQGVEAQLKMSFPEIKSVRDV 181
>gi|71066466|ref|YP_265193.1| hypothetical protein Psyc_1911 [Psychrobacter arcticus 273-4]
gi|71039451|gb|AAZ19759.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
Length = 227
Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGI---VFLSMRGACSGCPSASET 167
+D++V +RI VL + + P++A GGD+ +GI L G C GC + T
Sbjct: 134 ADASVEERINYVLQSEINPSLAAHGGDVQLLELIDEEGIGLTAVLKFGGGCQGCSAVDMT 193
Query: 168 LKYGVANILNHFVPEVKDIRT 188
L+ GV L +PE+ +
Sbjct: 194 LRQGVEVQLKQQIPELTQVID 214
>gi|242277615|ref|YP_002989744.1| Fe-S cluster assembly protein NifU [Desulfovibrio salexigens DSM
2638]
gi|242120509|gb|ACS78205.1| Fe-S cluster assembly protein NifU [Desulfovibrio salexigens DSM
2638]
Length = 279
Score = 88.7 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 89 DPIIHNGGLGDMKLDDMGSGDFIE-SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD 147
+ II G+ + ++ Q + +V+D +RPA+ +DGGDI
Sbjct: 178 EEIITEVLTGEAAKPAPEPEKPAKLTNIKRFQLVTKVIDEEIRPALNKDGGDIELIDIDG 237
Query: 148 GIVFLSMRGACSGCPSASETLKYGVANILNHFV-PEVKDIRT 188
V +S+RGAC GCPS+ TLK V L V PE+ +R
Sbjct: 238 HEVIVSLRGACVGCPSSGRTLKDFVERRLKETVEPEI-SVRE 278
>gi|148653644|ref|YP_001280737.1| HesB/YadR/YfhF-family protein [Psychrobacter sp. PRwf-1]
gi|148572728|gb|ABQ94787.1| HesB/YadR/YfhF-family protein [Psychrobacter sp. PRwf-1]
Length = 216
Score = 88.7 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 53/136 (38%), Gaps = 14/136 (10%)
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE---------SDSAV 117
+ D L+ P S P + + + K G F +D++V
Sbjct: 68 EEDEADLQMPFEPFTAYIEASSVPYLEDAVIDYNKDRFGGQLTFRAPNSKVPKVGADASV 127
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGI---VFLSMRGACSGCPSASETLKYGV 172
+RI VL + + P++A GGD+ +G+ L G C GC + TL+ GV
Sbjct: 128 EERINYVLQSEINPSLAAHGGDVQLLELIEEEGVGLTAVLKFGGGCQGCSAVDMTLRQGV 187
Query: 173 ANILNHFVPEVKDIRT 188
L +PE+ +
Sbjct: 188 EVQLKQQIPELTQVVD 203
>gi|32267366|ref|NP_861398.1| hypothetical protein HH1867 [Helicobacter hepaticus ATCC 51449]
gi|32263419|gb|AAP78464.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 91
Score = 88.7 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
F SD + ++ V+ +VRP + DGGDI G +D V++ + GAC GCPS++ TL
Sbjct: 1 MFPFSDEELKMPVEIVIQ-KVRPTLTLDGGDITLLGIKDAKVYVRLEGACKGCPSSANTL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
KY + N L + P++ +
Sbjct: 60 KYAIENRLKEEIHPDIAIV 78
>gi|311747521|ref|ZP_07721306.1| NifU domain protein [Algoriphagus sp. PR1]
gi|126574883|gb|EAZ79254.1| NifU domain protein [Algoriphagus sp. PR1]
Length = 82
Score = 88.7 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYGVA 173
+ + +I+ LD +RP + DGG++ D ++ + M G+C CP +S TLK GV
Sbjct: 3 TELKNKIEFALDT-IRPYLEADGGNVRIVELTEDMVLRIEMLGSCGSCPMSSMTLKAGVE 61
Query: 174 NILNHFVPEVKDIRTV 189
+ + +PE+ + +
Sbjct: 62 DAIKRAIPEITKVEAI 77
>gi|322379101|ref|ZP_08053503.1| conserved hypothetical nifU-like protein [Helicobacter suis HS1]
gi|322380564|ref|ZP_08054730.1| NifU-like protein [Helicobacter suis HS5]
gi|321147026|gb|EFX41760.1| NifU-like protein [Helicobacter suis HS5]
gi|321148473|gb|EFX42971.1| conserved hypothetical nifU-like protein [Helicobacter suis HS1]
Length = 89
Score = 88.7 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
SD + + ++ L+ ++RP + RDGGD+V G ++ V++S+ GAC GC S++ TLK+G+
Sbjct: 4 SDQELQKPVQRALE-KIRPVLLRDGGDVVLLGIKEAKVYVSLEGACKGCSSSANTLKFGI 62
Query: 173 ANILNHFV-PEVKDI 186
L + P+++ +
Sbjct: 63 ERCLQEEIHPDMEVV 77
>gi|222823154|ref|YP_002574727.1| NifU family protein [Campylobacter lari RM2100]
gi|222538375|gb|ACM63476.1| conserved hypothetical protein, NifU family protein [Campylobacter
lari RM2100]
Length = 91
Score = 88.3 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+ SD +++ +K L + + DGG + F G ++G+V++ + GAC GCPS+ TL
Sbjct: 2 NMPFSDEELIEPVKASLAKTMH-ILENDGGGLDFLGVKNGVVYVKLTGACHGCPSSGTTL 60
Query: 169 KYGVANILNHFV-PEVKDI 186
KYG+ L + P++ +
Sbjct: 61 KYGLEKQLKIDIHPDITIV 79
>gi|299771122|ref|YP_003733148.1| Iron-sulfur cluster biosynthesis family protein [Acinetobacter sp.
DR1]
gi|298701210|gb|ADI91775.1| Iron-sulfur cluster biosynthesis family protein [Acinetobacter sp.
DR1]
Length = 212
Score = 88.3 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI +L + P +A GG+ +D L G C GC + TL
Sbjct: 120 DASIEERITYILQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLKFGGGCQGCSAIDVTL 179
Query: 169 KYGVANILNHFVPEVKDIRT 188
K GV L +PE++ +
Sbjct: 180 KQGVETTLKEQIPELQRVVD 199
>gi|283953743|ref|ZP_06371274.1| NifU family protein [Campylobacter jejuni subsp. jejuni 414]
gi|283794784|gb|EFC33522.1| NifU family protein [Campylobacter jejuni subsp. jejuni 414]
Length = 90
Score = 88.3 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD ++ +K L+ + P + RDGG + F G ++G+V++ + GAC GC S+ TL
Sbjct: 1 MMPFSDEELINPVKASLEKSL-PMLERDGGGLEFLGIKNGVVYVHLIGACKGCTSSGITL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
KYG+ L + PE+ +
Sbjct: 60 KYGLERQLKIDIHPEITIV 78
>gi|219847420|ref|YP_002461853.1| nitrogen-fixing NifU domain-containing protein [Chloroflexus
aggregans DSM 9485]
gi|219541679|gb|ACL23417.1| nitrogen-fixing NifU domain protein [Chloroflexus aggregans DSM
9485]
Length = 286
Score = 88.3 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ V R + VLDN RP + GGD RDG+ ++ + G+C+GC ++ TL+ V
Sbjct: 90 ADPVTRARRVLDN-ARPYMQSHGGDAELVDVRDGVAYVRLHGSCNGCSLSAFTLRKHVEE 148
Query: 175 ILNHFVPEVKDIRTV 189
L VPE+ + V
Sbjct: 149 ALLREVPEMTRLEVV 163
>gi|326795571|ref|YP_004313391.1| Fe/S biogenesis protein nfuA [Marinomonas mediterranea MMB-1]
gi|326546335|gb|ADZ91555.1| Fe/S biogenesis protein nfuA [Marinomonas mediterranea MMB-1]
Length = 193
Score = 88.3 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLKYGV 172
DS + +I VL + V P +A GG++ G+ L G C GC + TLK GV
Sbjct: 106 DSPIEDQINYVLYSDVNPGLAAHGGEVKLVEVIEGGVAVLQFGGGCQGCSAVDLTLKEGV 165
Query: 173 ANILNHFVPEVKDIRT 188
L VP + ++
Sbjct: 166 EKTLIEKVPGLTAVKD 181
>gi|150015239|ref|YP_001307493.1| NifU domain-containing protein [Clostridium beijerinckii NCIMB
8052]
gi|149901704|gb|ABR32537.1| nitrogen-fixing NifU domain protein [Clostridium beijerinckii NCIMB
8052]
Length = 73
Score = 88.3 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ + I + LD ++RP + RDGGD+ DG+V + M+GAC CP A T+K +
Sbjct: 1 MKELIMKSLD-KIRPMLQRDGGDVELVDVSNDGVVSVKMQGACGNCPGAMMTIKMIIEQK 59
Query: 176 LNHFVPEVKDIRTV 189
L VP V ++ V
Sbjct: 60 LKEEVPGVTEVIGV 73
>gi|254410535|ref|ZP_05024314.1| Fe-S cluster assembly protein NifU [Microcoleus chthonoplastes PCC
7420]
gi|196182741|gb|EDX77726.1| Fe-S cluster assembly protein NifU [Microcoleus chthonoplastes PCC
7420]
Length = 315
Score = 88.3 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/202 (20%), Positives = 68/202 (33%), Gaps = 35/202 (17%)
Query: 19 GQVVLVEGAIHFS----NAKEAEISPLASRIFSIPGIASV----YFGYDFIT----VG-- 64
GQ L + +E + SPL F G++S + +T V
Sbjct: 117 GQEALEAAISDYKGIPVRPEEEDESPLVCSCF---GVSSAKIKRLIRENHLTNAEEVTNY 173
Query: 65 -KDQ-------YDWEHLRPPVL---GMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIES 113
K + + L V + PI +
Sbjct: 174 IKAGGGCGSCLAEIDDLVIEVTQEQETLNTAASLSAPIPQPAVATTTPSTSPVKEETSPP 233
Query: 114 DSAV-----VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+ + + I++VL+ +RP +A DGGD+ V + ++G+C GCPS TL
Sbjct: 234 PATLTNLQKITLIQQVLETEIRPTLAYDGGDVELYDVEGDRVKVILKGSCDGCPSVMITL 293
Query: 169 KYGVANILNHFV-PEVKDIRTV 189
K + L V P + + V
Sbjct: 294 KMAIEKRLQERVSPNLM-VEAV 314
>gi|293608910|ref|ZP_06691213.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829483|gb|EFF87845.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325121322|gb|ADY80845.1| putative membrane-bound protein in GNT I transport system (GntY)
[Acinetobacter calcoaceticus PHEA-2]
Length = 212
Score = 88.3 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI +L + P +A GG+ +D L G C GC + TL
Sbjct: 120 DASIEERITYILQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLKFGGGCQGCSAIDVTL 179
Query: 169 KYGVANILNHFVPEVKDIRT 188
K GV L +PE++ +
Sbjct: 180 KQGVETTLRENIPELQRVVD 199
>gi|304311311|ref|YP_003810909.1| hypothetical protein HDN1F_16740 [gamma proteobacterium HdN1]
gi|301797044|emb|CBL45257.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 199
Score = 88.3 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKY 170
+S+V +RI ++ + + P +A GG + + D + L G+C GC TLK
Sbjct: 110 ENSSVEERINHIIFSEINPQLASHGGSVELQQLIDDDTVAILKFGGSCQGCGMIDVTLKQ 169
Query: 171 GVANILNHFVPEVKDIRTV 189
GV L VPE+K + V
Sbjct: 170 GVEKTLLDRVPELKRVTDV 188
>gi|298527898|ref|ZP_07015302.1| Fe-S cluster assembly protein NifU [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511550|gb|EFI35452.1| Fe-S cluster assembly protein NifU [Desulfonatronospira
thiodismutans ASO3-1]
Length = 281
Score = 88.3 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 89 DPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG 148
+ ++ + + S + ++ +Q + V+D +RP++ +DGGDI
Sbjct: 179 EKLLDQVRSQTLTPVEPVSEERPMTNIKRMQLVTRVVDEEIRPSLHKDGGDIELVDIEGP 238
Query: 149 IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
V +S RGAC+GCPS+ T K V L V + V
Sbjct: 239 KVMVSFRGACAGCPSSHLTAKEVVEKKLKERVDSQIQVEEV 279
>gi|254480747|ref|ZP_05093994.1| IscR-regulated protein YhgI [marine gamma proteobacterium HTCC2148]
gi|214039330|gb|EEB79990.1| IscR-regulated protein YhgI [marine gamma proteobacterium HTCC2148]
Length = 191
Score = 88.3 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKY 170
+ +S + RI VL N V PA+A GG++ D L G C GC + +TLK
Sbjct: 102 DENSPMEDRINYVLYNEVNPALAAHGGEVSLVEITEDNFAVLRFGGGCQGCSAVDQTLKG 161
Query: 171 GVANILNHFVPEVKDIRT 188
GV L +P++ +R
Sbjct: 162 GVEKTLLEQLPQLAGVRD 179
>gi|93007026|ref|YP_581463.1| HesB/YadR/YfhF [Psychrobacter cryohalolentis K5]
gi|92394704|gb|ABE75979.1| HesB/YadR/YfhF [Psychrobacter cryohalolentis K5]
Length = 257
Score = 87.9 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGI---VFLSMRGACSGCPSASET 167
+D++V +RI VL + + P++A GGD+ +G+ L G C GC + T
Sbjct: 164 ADASVEERINYVLQSEINPSLAAHGGDVQLLELIDEEGVGLTAVLKFGGGCQGCSAVDMT 223
Query: 168 LKYGVANILNHFVPEVKDIRT 188
L+ GV L +PE+ +
Sbjct: 224 LRQGVEVQLKQQIPELTQVID 244
>gi|308234420|ref|ZP_07665157.1| nitrogen-fixing NifU domain protein [Atopobium vaginae DSM 15829]
gi|328944265|ref|ZP_08241729.1| YhgI protein [Atopobium vaginae DSM 15829]
gi|327491184|gb|EGF22959.1| YhgI protein [Atopobium vaginae DSM 15829]
Length = 189
Score = 87.9 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 87 SGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY- 145
S I + + + + I E + +R ++ DGGDIV
Sbjct: 83 SSPDISPEAQHELDNFQAHETPSEKPAHVPINREILEATLDVIRESLQADGGDIVLVNVS 142
Query: 146 RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
DG+V L M GAC+GCP ++ + GV IL VP V +
Sbjct: 143 DDGVVTLDMVGACAGCPMSAYDMSEGVERILKEHVPGVVKVEP 185
>gi|226952464|ref|ZP_03822928.1| DNA uptake protein [Acinetobacter sp. ATCC 27244]
gi|294649752|ref|ZP_06727157.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
gi|226836786|gb|EEH69169.1| DNA uptake protein [Acinetobacter sp. ATCC 27244]
gi|292824361|gb|EFF83159.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
19194]
Length = 212
Score = 87.9 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI +L + + P +A GG+ ++ L G C GC + TL
Sbjct: 120 DASIEERITYILQSEINPGLAGHGGNCSLVEVQEDAEHGLTAVLKFGGGCQGCSAIDVTL 179
Query: 169 KYGVANILNHFVPEVKDIRT 188
K GV L +PE++ +
Sbjct: 180 KQGVETTLRQHIPELQRVVD 199
>gi|307153502|ref|YP_003888886.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7822]
gi|306983730|gb|ADN15611.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7822]
Length = 297
Score = 87.9 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 47/114 (41%)
Query: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVAR 135
+ ++ E + ++ +G ++ +Q I+ VL+ VRP +
Sbjct: 184 DIDDILKEVATERTKAVEAATNVVTAKENNTNGFKQLTNIKKIQLIERVLEQEVRPILMA 243
Query: 136 DGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
DGG++ IV + ++GAC C ++ TLK + L + ++ V
Sbjct: 244 DGGNVELYDLEGEIVKVVLKGACGSCAGSTATLKIAIEAKLKELIDPALVVQAV 297
>gi|262372009|ref|ZP_06065288.1| iron-sulfur cluster biosynthesis family protein [Acinetobacter
junii SH205]
gi|262312034|gb|EEY93119.1| iron-sulfur cluster biosynthesis family protein [Acinetobacter
junii SH205]
Length = 212
Score = 87.9 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI VL + + P + GG+ ++ L G C GC + TL
Sbjct: 120 DASIEERITYVLQSEINPGLEGHGGNCSLVEVQNDPEHGLTAVLKFGGGCQGCSAIDVTL 179
Query: 169 KYGVANILNHFVPEVKDIRT 188
K GV L VPE++ +
Sbjct: 180 KQGVETTLKQHVPELQRVVD 199
>gi|300867915|ref|ZP_07112555.1| Fe-S cluster assembly protein NifU [Oscillatoria sp. PCC 6506]
gi|300334052|emb|CBN57731.1| Fe-S cluster assembly protein NifU [Oscillatoria sp. PCC 6506]
Length = 298
Score = 87.9 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE-SDSAVVQRIKEVLDNRVRPAVA 134
P+ +I E F I + + + I++VL+ VRP +
Sbjct: 185 PIDDLIAEVFKEKANITKVATEIAFAKETKNQSPTQPLTPIQKISLIQKVLEE-VRPLLI 243
Query: 135 RDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
DGGD+ IV + ++GAC CPS++ TLK + L V
Sbjct: 244 ADGGDVELYDVEGDIVKVLLKGACGSCPSSTSTLKGLIETTLKEKV 289
>gi|224476033|ref|YP_002633639.1| hypothetical protein Sca_0540 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222420640|emb|CAL27454.1| hypothetical protein with NifU domain [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 80
Score = 87.9 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ + ++ V++ R+RP + RDGGD DGIV L + GAC+ CPS++ TLK G+
Sbjct: 4 ENTTIFDQVAVVIE-RLRPFLLRDGGDCTLIDVEDGIVKLQLHGACNTCPSSTITLKAGI 62
Query: 173 ANIL 176
L
Sbjct: 63 ERAL 66
>gi|307151545|ref|YP_003886929.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Cyanothece
sp. PCC 7822]
gi|306981773|gb|ADN13654.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. PCC
7822]
Length = 292
Score = 87.9 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
+ +R+ + L+ VRP + GD+ V + + G CS CP+++
Sbjct: 88 HELIKPPQPPLEKRLNQALEE-VRPGLKSHNGDVELVAIELPDTVKVRLVGTCSNCPAST 146
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
T+K GV + ++ PE+ + +V
Sbjct: 147 LTMKQGVEQTIKNYCPEITHVISV 170
>gi|149371976|ref|ZP_01891295.1| nifU-like domain protein [unidentified eubacterium SCB49]
gi|149355116|gb|EDM43677.1| nifU-like domain protein [unidentified eubacterium SCB49]
Length = 80
Score = 87.9 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYGVA 173
+ + +++ LD +RP + DGGDI+ G DG V + ++GAC GC TLK GV
Sbjct: 4 AELKTKVEIALDE-IRPFLQTDGGDILLLGIEDGTTVKVQLQGACVGCSVNQMTLKSGVE 62
Query: 174 NILNHFVPEVKDIRTV 189
+ P+++ + V
Sbjct: 63 MTIKKHAPQIERVINV 78
>gi|205355651|ref|ZP_03222421.1| NifU protein [Campylobacter jejuni subsp. jejuni CG8421]
gi|205346428|gb|EDZ33061.1| NifU protein [Campylobacter jejuni subsp. jejuni CG8421]
Length = 90
Score = 87.9 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD ++ +K L+ + P + RDGG + F G ++GIV++ + GAC GC S+ TL
Sbjct: 1 MMPFSDEELINPVKASLEKSL-PMLERDGGGLEFLGIKNGIVYVHLIGACKGCVSSGTTL 59
Query: 169 KYGVANILNHFV-PEVK 184
KYG+ L + PE+
Sbjct: 60 KYGLERQLKIDIHPEIT 76
>gi|120601745|ref|YP_966145.1| NifU domain-containing protein [Desulfovibrio vulgaris DP4]
gi|120561974|gb|ABM27718.1| nitrogen-fixing NifU domain protein [Desulfovibrio vulgaris DP4]
gi|311234644|gb|ADP87498.1| nitrogen-fixing NifU domain protein [Desulfovibrio vulgaris RCH1]
Length = 75
Score = 87.9 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANI 175
+ ++++ L VRP + +DGGD+ +G+V + + G C GCP + +TLK V +
Sbjct: 1 MRDKVEQAL-AIVRPLLQQDGGDVELVDITPEGVVRVRLTGRCKGCPMSQKTLKNSVEKM 59
Query: 176 LNHFVPEVKDIRTV 189
+ FVP V+ + V
Sbjct: 60 VLKFVPAVQRVEAV 73
>gi|254458634|ref|ZP_05072058.1| NifU family protein [Campylobacterales bacterium GD 1]
gi|207084400|gb|EDZ61688.1| NifU family protein [Campylobacterales bacterium GD 1]
Length = 91
Score = 87.9 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+D ++ ++ + N++RP++A DGGDI F ++G V++ ++GAC GC S+ TL
Sbjct: 1 MIPFTDEELMNPVQVAI-NKIRPSLALDGGDIDFITVKNGNVYVQLKGACIGCASSGSTL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
KYGV L + PE+ +
Sbjct: 60 KYGVERQLRMDIHPELTVV 78
>gi|67921275|ref|ZP_00514794.1| Nitrogen-fixing NifU, C-terminal:Rieske [2Fe-2S] region
[Crocosphaera watsonii WH 8501]
gi|67857392|gb|EAM52632.1| Nitrogen-fixing NifU, C-terminal:Rieske [2Fe-2S] region
[Crocosphaera watsonii WH 8501]
Length = 286
Score = 87.9 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Query: 74 RPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD-FIESDSAVVQRIKEVLDNRVRPA 132
+ + +I P + ++ + D + +RI++ L++ VRP
Sbjct: 49 KEALTRLIKTVKKEALPALREAVEDELVYGILRYHDLIKPPTPPLEKRIEQALES-VRPG 107
Query: 133 VARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+ GD+ + V + + G CS CP+++ T+K GV + + PE+ + +V
Sbjct: 108 LKSHHGDVELVAIKLPDTVEVQLVGTCSNCPASTLTMKQGVEQAIKTYCPEITKVISV 165
>gi|298706477|emb|CBJ29464.1| iron-sulfur cluster assembly protein, similar to nifU [Ectocarpus
siliculosus]
Length = 494
Score = 87.9 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Query: 86 ISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVF--K 143
++ P+ ++ + +VLD VRP + DGG++
Sbjct: 313 MAAPPLPPGIAAPVPDAPPTPPASECNDLEFTLENVDKVLDE-VRPYLIADGGNVRVMGV 371
Query: 144 GYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+V L+++GAC CPS++ T+K G+ +LN + + V
Sbjct: 372 DIDRRVVKLALQGACGSCPSSTTTMKMGIERVLNENFLNMGGVEQV 417
>gi|255525728|ref|ZP_05392659.1| nitrogen-fixing NifU domain protein [Clostridium carboxidivorans
P7]
gi|296188013|ref|ZP_06856405.1| NifU-like domain protein [Clostridium carboxidivorans P7]
gi|255510551|gb|EET86860.1| nitrogen-fixing NifU domain protein [Clostridium carboxidivorans
P7]
gi|296047139|gb|EFG86581.1| NifU-like domain protein [Clostridium carboxidivorans P7]
Length = 73
Score = 87.5 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 127 NRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
N++RP + RDGGD+ DGIV + M+GAC CP A T+K + L VP VK+
Sbjct: 10 NKIRPMLQRDGGDVELVDVSSDGIVSVKMQGACGNCPGAMMTIKGVIEATLKEEVPGVKE 69
Query: 186 IRTV 189
+ V
Sbjct: 70 VIGV 73
>gi|260061614|ref|YP_003194694.1| hypothetical protein RB2501_08435 [Robiginitalea biformata
HTCC2501]
gi|88785746|gb|EAR16915.1| hypothetical protein RB2501_08435 [Robiginitalea biformata
HTCC2501]
Length = 79
Score = 87.5 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYG 171
+ + +I+ L+ +RP + DGGDI G DG V + + GAC GC TLK G
Sbjct: 2 TSEELTSKIEAALEE-IRPFLQSDGGDISLVGIEDGTRVKVRLEGACVGCTVNQMTLKSG 60
Query: 172 VANILNHFVPEVKDIRTV 189
V + P+++ + +
Sbjct: 61 VEMTIKKHAPQIEQVINI 78
>gi|293402218|ref|ZP_06646356.1| NifU domain protein [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304325|gb|EFE45576.1| NifU domain protein [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 78
Score = 87.5 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
I+ V++ ++RP + RDGGD+ + + DGIV + + GAC GC S +TLK G+ I+
Sbjct: 6 DEIRNVIE-KIRPYIQRDGGDVEYVSFTDGIVRVRLLGACVGCMSIGDTLKDGIEAIIMD 64
Query: 179 FVPEVKDIR 187
V V ++R
Sbjct: 65 EVAGVSEVR 73
>gi|220907771|ref|YP_002483082.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7425]
gi|219864382|gb|ACL44721.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7425]
Length = 296
Score = 87.5 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I++VL VRP + DGGD+ +V + ++GAC C S++ TLK + L V
Sbjct: 225 IQQVLTEEVRPVLMADGGDVELYDVEGDVVKVLLKGACGNCSSSTATLKIAIEARLQERV 284
Query: 181 -PEVKDIRTV 189
P + + V
Sbjct: 285 LPSLV-VEAV 293
>gi|325285793|ref|YP_004261583.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga lytica
DSM 7489]
gi|324321247|gb|ADY28712.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga lytica
DSM 7489]
Length = 79
Score = 87.5 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYG 171
+ V +++ L+ +RP + DGGDI + V + + GAC GC TLK G
Sbjct: 2 TTEEVRTNVEKALEE-IRPFLQSDGGDISLISIDNDTSVKVKLEGACVGCSVNQMTLKSG 60
Query: 172 VANILNHFVPEVKDIRTV 189
V + +VP+++++ V
Sbjct: 61 VEMTIKKYVPQIEEVINV 78
>gi|57505611|ref|ZP_00371538.1| NifU domain protein [Campylobacter upsaliensis RM3195]
gi|57016158|gb|EAL52945.1| NifU domain protein [Campylobacter upsaliensis RM3195]
Length = 90
Score = 87.5 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD ++ +K+ L+ + P + RDGG + F G ++GIV++ + GAC GC S+S TL
Sbjct: 1 MIPFSDEELINPVKKSLEKSL-PILERDGGGLEFLGVKNGIVYVHLIGACKGCASSSITL 59
Query: 169 KYGVANILNHFV-PEV 183
KY + L + PE+
Sbjct: 60 KYSLERQLKMDIHPEI 75
>gi|152990000|ref|YP_001355722.1| hypothetical protein NIS_0251 [Nitratiruptor sp. SB155-2]
gi|151421861|dbj|BAF69365.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 100
Score = 87.5 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
SD + +++V++ +++P +A DGGDI G ++G VF+ + GAC GC ++ TLK
Sbjct: 3 IPFSDEDLYPAVEKVIE-KIKPMLALDGGDIKLLGVKNGRVFVQLGGACVGCSASGNTLK 61
Query: 170 YGVANILNHFV-PEVKDI 186
YGV L + PE++ +
Sbjct: 62 YGVERQLKIDIHPEIEVV 79
>gi|86141694|ref|ZP_01060218.1| nifU protein-like [Leeuwenhoekiella blandensis MED217]
gi|85831257|gb|EAQ49713.1| nifU protein-like [Leeuwenhoekiella blandensis MED217]
Length = 80
Score = 87.5 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYG 171
+D+ + +++ L+ +RP + DGGDI DG V + + GAC GC TLK G
Sbjct: 2 TDTELKGKVEAALEE-IRPFLQSDGGDIALLSIEDGTTVKVQLEGACVGCSVNQMTLKSG 60
Query: 172 VANILNHFVPEVKDIRTV 189
V + P+++ + +
Sbjct: 61 VEMTIKKHAPQIERVINI 78
>gi|118475450|ref|YP_891271.1| NifU family protein [Campylobacter fetus subsp. fetus 82-40]
gi|118414676|gb|ABK83096.1| NifU family protein [Campylobacter fetus subsp. fetus 82-40]
Length = 88
Score = 87.5 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD +++ +KE L + P + +DGG + G ++G+V++ + G C GC ++S+TL
Sbjct: 1 MIPFSDEELLEPVKESL-KVIMPMLEQDGGGMELLGIKNGVVYVRLTGHCHGCAASSQTL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
KYGV L + PE+ +
Sbjct: 60 KYGVERQLKVDIHPELSVV 78
>gi|46579079|ref|YP_009887.1| nitrogen fixation protein nifU [Desulfovibrio vulgaris str.
Hildenborough]
gi|120603338|ref|YP_967738.1| Fe-S cluster assembly protein NifU [Desulfovibrio vulgaris DP4]
gi|46448492|gb|AAS95146.1| nitrogen fixation protein nifU [Desulfovibrio vulgaris str.
Hildenborough]
gi|120563567|gb|ABM29311.1| Fe-S cluster assembly protein NifU [Desulfovibrio vulgaris DP4]
gi|311232925|gb|ADP85779.1| Fe-S cluster assembly protein NifU [Desulfovibrio vulgaris RCH1]
Length = 281
Score = 87.5 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ +Q + +VLD +RP + +DGGDI V +++RG C+ CPS+ TLK V
Sbjct: 203 TNVQRMQLVMKVLDGEIRPRLQQDGGDIELVDMNGTEVMVALRGMCTSCPSSQLTLKEFV 262
Query: 173 ANILNHFVPEVKDIRTV 189
L V + +R V
Sbjct: 263 ERTLRDHVDQEIVVREV 279
>gi|126656692|ref|ZP_01727906.1| hypothetical protein CY0110_23676 [Cyanothece sp. CCY0110]
gi|126621912|gb|EAZ92620.1| hypothetical protein CY0110_23676 [Cyanothece sp. CCY0110]
Length = 286
Score = 87.2 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVAN 174
+ +RI++ L+ VRP + GD+ + V + + G CS CP+++ T+K GV
Sbjct: 92 PLEKRIQQALET-VRPGLKSHHGDVELVAIKLPDTVEVQLVGTCSNCPASTLTMKQGVEQ 150
Query: 175 ILNHFVPEVKDIRTV 189
+ + PE+K++ +V
Sbjct: 151 AIKTYCPEIKNVISV 165
>gi|225012595|ref|ZP_03703030.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-2A]
gi|225003128|gb|EEG41103.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-2A]
Length = 84
Score = 87.2 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYG 171
+ + +I+E L+ +RP + DGGDI DG V + + GAC GC TLK G
Sbjct: 2 NSEEINVKIREALEE-IRPFLKSDGGDISLVSVEDGKHVKVQLHGACVGCSVNQMTLKSG 60
Query: 172 VANILNHFVPEVKDIRTV 189
V + ++P+++ + ++
Sbjct: 61 VELTIKKYLPQIETVTSI 78
>gi|21672789|ref|NP_660856.1| hypothetical protein BUsg525 [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25091672|sp|Q8K934|NFUA_BUCAP RecName: Full=Fe/S biogenesis protein nfuA
gi|21623438|gb|AAM68067.1| hypothetical 21.0 kDa protein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 192
Score = 87.2 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 66/179 (36%), Gaps = 14/179 (7%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ + HF + E R+F I PG + G + T +D + ++
Sbjct: 4 ISDKAQNHFISLLSKEPIGTQIRVFIINPGTQNAECGVAYCT--EDDVENHDIKLNYNHF 61
Query: 81 -------IMEHFISGDP---IIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVR 130
I+ + + + + G K + S++ +RI+ L+N +
Sbjct: 62 FVYVDRSIISFLKNSEIDLIVDNVGSQLTFKAPYAKQNYSKNTASSLKERIENFLNNNIN 121
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P ++ GG + ++ + G C+GC TLK V + F PE+K +
Sbjct: 122 PQLSMHGGKVHLIQISQNNTALIKFTGGCNGCSMIGTTLKEIVEKKILSFFPEIKKVID 180
>gi|157804286|gb|ABV79889.1| NifU [Anabaena siamensis TISTR 8012]
Length = 195
Score = 87.2 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 1/114 (0%)
Query: 77 VLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE-SDSAVVQRIKEVLDNRVRPAVAR 135
+ +I E N K + G ++ + I++VLD VR +
Sbjct: 82 IDDIISEVKQESAKQNLNINGAKAKTEISSVGQQKPLTNVQKIALIQKVLDEEVRLVLIA 141
Query: 136 DGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
DGGD+ V + ++GAC C S++ TLK + L + + + V
Sbjct: 142 DGGDVELYDIEGDKVKVKLQGACGSCSSSTATLKIAIEARLRDRISKDIIVEAV 195
>gi|256819880|ref|YP_003141159.1| nitrogen-fixing NifU domain-containing protein [Capnocytophaga
ochracea DSM 7271]
gi|256581463|gb|ACU92598.1| nitrogen-fixing NifU domain protein [Capnocytophaga ochracea DSM
7271]
Length = 79
Score = 87.2 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYGVA 173
+ Q + + LD ++RP + DGGDI DG IV + + G C+ C TLK GV
Sbjct: 4 EELKQEVIKALD-KIRPYLQNDGGDISLVDIEDGKIVKVRLEGTCTNCSVNQLTLKSGVE 62
Query: 174 NILNHFVPEVKDIRTV 189
+ FVP+++ + +V
Sbjct: 63 MTIKEFVPQIEKVISV 78
>gi|57233705|ref|YP_182326.1| NifU-like protein [Dehalococcoides ethenogenes 195]
gi|57224153|gb|AAW39210.1| NifU-like protein [Dehalococcoides ethenogenes 195]
Length = 72
Score = 87.2 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++++++ VLD ++RPA+ DGG++ DG+V + + GAC+GCP ++ TLK G+ IL
Sbjct: 1 MLEKVEAVLD-KIRPALEADGGNVELVEVVDGVVKVKLVGACAGCPMSTMTLKNGIEKIL 59
Query: 177 NHFVPEVKDIRT 188
+PEVK++
Sbjct: 60 KREIPEVKEVVA 71
>gi|296113867|ref|YP_003627805.1| nifU-like protein [Moraxella catarrhalis RH4]
gi|295921561|gb|ADG61912.1| nifU-like protein [Moraxella catarrhalis RH4]
gi|326560549|gb|EGE10930.1| nifU-like protein [Moraxella catarrhalis 103P14B1]
gi|326561419|gb|EGE11769.1| nifU-like protein [Moraxella catarrhalis 46P47B1]
gi|326562191|gb|EGE12519.1| nifU-like protein [Moraxella catarrhalis 7169]
gi|326565627|gb|EGE15790.1| nifU-like protein [Moraxella catarrhalis 12P80B1]
gi|326567147|gb|EGE17269.1| nifU-like protein [Moraxella catarrhalis BC1]
gi|326568427|gb|EGE18507.1| nifU-like protein [Moraxella catarrhalis BC7]
gi|326572317|gb|EGE22312.1| nifU-like protein [Moraxella catarrhalis BC8]
gi|326573929|gb|EGE23879.1| nifU-like protein [Moraxella catarrhalis O35E]
gi|326574921|gb|EGE24851.1| nifU-like protein [Moraxella catarrhalis 101P30B1]
gi|326576248|gb|EGE26163.1| nifU-like protein [Moraxella catarrhalis CO72]
Length = 203
Score = 87.2 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 55/166 (33%), Gaps = 16/166 (9%)
Query: 37 EISPLASRIFSIP-GIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNG 95
E + RIF G + D+ D + L P +H+
Sbjct: 27 EEEGIGVRIFVEHAGTPRAECCMSYCH--ADEIDDQDLHIDYAKFTAHIDADSIPYLHDA 84
Query: 96 GLGDMKLDDMGSGDFIE---------SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR 146
+ K G F ++++ +RI VL + + P +A GG +
Sbjct: 85 VIDYNKDRFGGQLTFRAPNSKVPQVGENASIEERINYVLQSEINPNLASHGGSVDLLEVI 144
Query: 147 DG----IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
+ L G C GC + TL+ GV L +PE+ +
Sbjct: 145 EDEAGLTAVLKFGGGCQGCSAVDVTLRQGVEVQLKQQIPELTQVVD 190
>gi|163753376|ref|ZP_02160500.1| nifU-like domain protein [Kordia algicida OT-1]
gi|161327108|gb|EDP98433.1| nifU-like domain protein [Kordia algicida OT-1]
Length = 79
Score = 87.2 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYG 171
+ + +++ LD +RP + DGGDI G + V + + GAC GC TLK G
Sbjct: 2 TSEEIKYNVQKALDE-IRPFLQSDGGDIKLVGIENDTLVKVQLEGACVGCSVNQMTLKSG 60
Query: 172 VANILNHFVPEVKDIRTV 189
V + VP+++ + +V
Sbjct: 61 VEMTIKKHVPQIEKVISV 78
>gi|332878832|ref|ZP_08446547.1| NifU-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332683183|gb|EGJ56065.1| NifU-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 78
Score = 86.8 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYG 171
+ + + +K LD ++RP + DGGDI D IV + + G C+ C TLK G
Sbjct: 2 TSEELREEVKNALD-KIRPYLQNDGGDITLVDIEDDKIVKVRLEGTCTNCAVNQMTLKSG 60
Query: 172 VANILNHFVPEVKDIRTV 189
V + FVP+++ + ++
Sbjct: 61 VEMTIKEFVPQIEQVISI 78
>gi|78358118|ref|YP_389567.1| Fe-S cluster assembly protein NifU [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78220523|gb|ABB39872.1| Fe-S cluster assembly protein NifU [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 280
Score = 86.8 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Query: 89 DPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG 148
++ + S+ +Q + + L+ +RP++ +DGGDI
Sbjct: 179 QKLLDEELGKTAACEVPEPQPRTLSNVQRMQLVVKTLEEDIRPSLQKDGGDIELVDIDGK 238
Query: 149 IVFLSMRGACSGCPSASETLKYGVANILNHFV-PEVKDIRTV 189
V +++RG C+ CPS+ TL V L V P++ ++ V
Sbjct: 239 EVKVALRGMCTHCPSSQLTLTNFVQRTLREHVEPDIT-VKEV 279
>gi|71275227|ref|ZP_00651514.1| Nitrogen-fixing NifU, C-terminal [Xylella fastidiosa Dixon]
gi|71899552|ref|ZP_00681708.1| HesB/YadR/YfhF:Nitrogen-fixing NifU, C-terminal [Xylella fastidiosa
Ann-1]
gi|71899937|ref|ZP_00682084.1| HesB/YadR/YfhF:Nitrogen-fixing NifU, C-terminal [Xylella fastidiosa
Ann-1]
gi|170731222|ref|YP_001776655.1| thioredoxin-like protein [Xylella fastidiosa M12]
gi|254767338|sp|B0U5V3|NFUA_XYLFM RecName: Full=Fe/S biogenesis protein nfuA
gi|71164036|gb|EAO13751.1| Nitrogen-fixing NifU, C-terminal [Xylella fastidiosa Dixon]
gi|71730300|gb|EAO32384.1| HesB/YadR/YfhF:Nitrogen-fixing NifU, C-terminal [Xylella fastidiosa
Ann-1]
gi|71730681|gb|EAO32756.1| HesB/YadR/YfhF:Nitrogen-fixing NifU, C-terminal [Xylella fastidiosa
Ann-1]
gi|167966015|gb|ACA13025.1| thioredoxin-like protein [Xylella fastidiosa M12]
Length = 199
Score = 86.8 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVA 173
+++V+R+ V++N + P +A GG + + +G+V L G C GC A TLK GV
Sbjct: 107 ASLVERVCWVVENEINPQLASHGGRVEVQEVSAEGVVLLRFGGGCHGCGMADVTLKQGVE 166
Query: 174 NILNHFVPEVKDIRT 188
L V V +R
Sbjct: 167 KTLMERVHGVIAVRD 181
>gi|300785684|ref|YP_003765975.1| thioredoxin-like protein [Amycolatopsis mediterranei U32]
gi|299795198|gb|ADJ45573.1| thioredoxin-like protein [Amycolatopsis mediterranei U32]
Length = 172
Score = 86.8 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 71 EHLRPPVLGMIMEHFISGD----PIIHNGGLGDMKLDDMGSGDFIESD---SAVVQRIKE 123
L ++ ++E + +G ++ L + DD G + D + +R+ E
Sbjct: 23 AELAEDLVHTLLEFYGAGLARIVELVDRPLLDRLAEDDHVRGLLVLHDLHPRSTHERVTE 82
Query: 124 VLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
LD +VRP + GD+ F DG++ L ++G C GCPS++ T KY + ++ P
Sbjct: 83 ALD-KVRPYLGSHAGDVEFVEIADGVLRLRLQGTCDGCPSSTVTAKYAIERVVREAAP 139
>gi|224373701|ref|YP_002608073.1| NifU family protein [Nautilia profundicola AmH]
gi|223588484|gb|ACM92220.1| NifU family protein [Nautilia profundicola AmH]
Length = 98
Score = 86.8 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASET 167
+ S+ + + + VLD VRP + DGGD+ R IVF+ ++G C GC SA T
Sbjct: 2 AEIPFSNEDLKEAVAGVLDE-VRPMLQMDGGDVTLIDVRKPIVFVQLQGGCVGCASAGAT 60
Query: 168 LKYGVANILNHFV-PEV 183
LKYG+ L + PE+
Sbjct: 61 LKYGIEKALKEKIHPEL 77
>gi|224130940|ref|XP_002320962.1| predicted protein [Populus trichocarpa]
gi|222861735|gb|EEE99277.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 86.8 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLS 153
G + + +++ VRP + DGG++ DG++ L
Sbjct: 51 TAIKATAPTGSSSPGLHSAQQFELNPQNVDLVLEEVRPYLISDGGNVDVVSVEDGVITLK 110
Query: 154 MRGACSGCPSASETLKYGVANILNHFVPE-VKDIRT 188
++GAC C S+ T+K G+ +L + V+DIR
Sbjct: 111 LQGACGNCASSETTMKMGIERVLKEKFGDAVQDIRQ 146
Score = 42.9 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 9/89 (10%)
Query: 101 KLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSG 160
+ D+ F E V+ I + LD +RPA+ GG + +G + G
Sbjct: 140 AVQDIRQLSFEEPKETTVEAINDHLDI-LRPAIKNFGGSVEVLSVENGGCRVEYTG---- 194
Query: 161 CPSASETLKYGVANILNHFVPEVKDIRTV 189
P + G+ + P++ D+ V
Sbjct: 195 -PESIG---SGIKAAIKEKFPDIVDVVFV 219
>gi|172036772|ref|YP_001803273.1| NifU-like protein [Cyanothece sp. ATCC 51142]
gi|171698226|gb|ACB51207.1| NifU-like protein [Cyanothece sp. ATCC 51142]
Length = 286
Score = 86.8 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Query: 74 RPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD-FIESDSAVVQRIKEVLDNRVRPA 132
+ + +I P + ++ + D + + +R+++ L VRP
Sbjct: 49 KEALSRLIKTVKKEALPSLREAVKDELVYGLLRYHDLIKPPNPPLEKRLEQALAT-VRPG 107
Query: 133 VARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+ GD+ + V + + G CS CP+++ T+K G+ + + PE+ ++ +V
Sbjct: 108 LKSHHGDVELVAIKLPNTVEVKLVGTCSNCPASTLTMKQGIEQAIKTYCPEITNVISV 165
>gi|213961919|ref|ZP_03390184.1| conserved domain protein [Capnocytophaga sputigena Capno]
gi|213955272|gb|EEB66589.1| conserved domain protein [Capnocytophaga sputigena Capno]
Length = 77
Score = 86.8 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYGVA 173
+ + + LD ++RP + DGGDI DG IV + + G C+ C TL+ GV
Sbjct: 2 EELRNEVIKALD-KIRPYLQNDGGDITLVDIEDGKIVKVRLEGTCTNCSVNQLTLRSGVE 60
Query: 174 NILNHFVPEVKDIRTV 189
+ +VP+++ + +V
Sbjct: 61 MTIKEYVPQIEKVISV 76
>gi|315225280|ref|ZP_07867097.1| nitrogen fixation protein NifU [Capnocytophaga ochracea F0287]
gi|314944963|gb|EFS96995.1| nitrogen fixation protein NifU [Capnocytophaga ochracea F0287]
Length = 79
Score = 86.8 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYGVA 173
+ Q++ + LD ++RP + DGGDI DG IV + + G C+ C TLK GV
Sbjct: 4 EKLKQKVIKALD-KIRPYLQNDGGDISLVDIEDGKIVKVRLEGTCTNCSVNQLTLKSGVE 62
Query: 174 NILNHFVPEVKDIRTV 189
+ FVP+++ + +V
Sbjct: 63 MTIKEFVPQIEKVISV 78
>gi|325972864|ref|YP_004249055.1| nitrogen-fixing NifU domain-containing protein [Spirochaeta sp.
Buddy]
gi|324028102|gb|ADY14861.1| nitrogen-fixing NifU domain-containing protein [Spirochaeta sp.
Buddy]
Length = 75
Score = 86.8 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++K +++ +RP++ DGGDI F V + ++GAC+GCP + TLK GV L
Sbjct: 1 MEDKVKRAIED-IRPSLQNDGGDIEFVSLVGSDVTVRLKGACAGCPMSQMTLKSGVERYL 59
Query: 177 NHFV-PEVKDI 186
+FV P++ +
Sbjct: 60 RNFVDPKLTVV 70
>gi|309776492|ref|ZP_07671474.1| NifU domain protein [Erysipelotrichaceae bacterium 3_1_53]
gi|308915720|gb|EFP61478.1| NifU domain protein [Erysipelotrichaceae bacterium 3_1_53]
Length = 76
Score = 86.8 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ IK+ ++ ++RP + RDGGD+ F + DGIV + + GAC GC S +T++ G+ IL
Sbjct: 5 IDEIKQTIE-KIRPYIQRDGGDVEFVSFEDGIVGVRLLGACVGCMSIDDTIQGGIEAILL 63
Query: 178 HFVPEVKDIRTV 189
V V +R V
Sbjct: 64 DEVDGVSGVRLV 75
>gi|330507732|ref|YP_004384160.1| NifU-like domain-containing protein [Methanosaeta concilii GP-6]
gi|328928540|gb|AEB68342.1| NifU-like domain protein [Methanosaeta concilii GP-6]
Length = 75
Score = 86.8 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ L ++R + DGGD+ DGIV + ++G C+GCP + TLK + L
Sbjct: 4 LNDEVEAAL-GKIREGLRVDGGDVELVDISDGIVTVRLQGHCAGCPFSQMTLKNFIEKEL 62
Query: 177 NHFVPEVKDIRTV 189
V +K + +V
Sbjct: 63 VKSVAGIKGVVSV 75
>gi|51702196|sp|Q9PAB5|NFUA_XYLFA RecName: Full=Fe/S biogenesis protein nfuA
Length = 199
Score = 86.4 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVA 173
+++V+R+ V++N + P +A GG + + +G+V L G C GC TLK GV
Sbjct: 107 ASLVERVCWVVENEINPQLASHGGRVEVQEVSAEGVVLLRFGGGCHGCGMVDVTLKQGVE 166
Query: 174 NILNHFVPEVKDIRT 188
L V V +R
Sbjct: 167 KTLMERVHGVIAVRD 181
>gi|9081905|gb|AAF82636.1|AF167538_3 NifU [Trichodesmium erythraeum IMS101]
Length = 291
Score = 86.4 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 33/69 (47%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I++VL VRP +A DGGD+ V + ++GAC C + TLK + L V
Sbjct: 223 IQQVLQQEVRPVLAEDGGDVELFDVDGDRVLVKLKGACGSCSNVLVTLKGAIEATLKERV 282
Query: 181 PEVKDIRTV 189
E + V
Sbjct: 283 SESLVVEAV 291
>gi|116753461|ref|YP_842579.1| NifU domain-containing protein [Methanosaeta thermophila PT]
gi|116664912|gb|ABK13939.1| nitrogen-fixing NifU domain protein [Methanosaeta thermophila PT]
Length = 75
Score = 86.4 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
++ + ++ L++ +R + +GGD+ DG+V++ + G+C+GCP + TL+ V
Sbjct: 2 QSMKEEVESTLES-IRNVLRIEGGDVELVDINDGVVYVKLTGSCAGCPFSQMTLRNFVER 60
Query: 175 ILNHFVPEVKDIRTV 189
L V VK + +V
Sbjct: 61 ELKKNVSGVKAVESV 75
>gi|125995235|dbj|BAF47150.1| NifU [Gloeothece sp. KO68DGA]
Length = 293
Score = 86.4 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Query: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVAR 135
+ +I E + + + ++ + I++VL+ V+PA+A+
Sbjct: 184 DIDDLIAEVMHERETAVAVATEVVKAKSEPKPL----TNIQKITLIQQVLEEEVKPALAQ 239
Query: 136 DGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV-PEVKDIRTV 189
DGGD +V + ++GAC C S+++TLK + L + PE+ + V
Sbjct: 240 DGGDCDLFDVDGDLVKVVLKGACGSCASSTQTLKIAIEARLRDRISPELT-VIAV 293
>gi|255319128|ref|ZP_05360346.1| IscR-regulated protein YhgI [Acinetobacter radioresistens SK82]
gi|262379260|ref|ZP_06072416.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|255303774|gb|EET82973.1| IscR-regulated protein YhgI [Acinetobacter radioresistens SK82]
gi|262298717|gb|EEY86630.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 212
Score = 86.4 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI VL + + P +A GG+ + L G C GC + TL
Sbjct: 120 DASIEERITYVLQSEINPGLAGHGGNCALVEVVEDEEHGLTAVLKFGGGCQGCSAIDVTL 179
Query: 169 KYGVANILNHFVPEVKDIRT 188
K GV L +PE+ +
Sbjct: 180 KQGVETTLKQHIPELSRVVD 199
>gi|94502038|ref|ZP_01308544.1| Thioredoxin-like protein [Oceanobacter sp. RED65]
gi|94425845|gb|EAT10847.1| Thioredoxin-like protein [Oceanobacter sp. RED65]
Length = 192
Score = 86.4 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYG 171
DS + ++ +L N + P +A GG++ D + L G C GC + TLK G
Sbjct: 104 DDSPIQDQVNYILYNEINPGLASHGGEVKLVEVTEDNLAILEFGGGCQGCSAVDITLKEG 163
Query: 172 VANILNHFVPEVKDIRT 188
+ L +P++ IR
Sbjct: 164 IEKTLLSKLPQLSGIRD 180
>gi|257457207|ref|ZP_05622382.1| nitrogen-fixing NifU domain protein [Treponema vincentii ATCC
35580]
gi|257445358|gb|EEV20426.1| nitrogen-fixing NifU domain protein [Treponema vincentii ATCC
35580]
Length = 94
Score = 86.4 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ + +++ LD VRP + GGD+ + DG+V + G C+GCP+A T + + L
Sbjct: 1 MYEELEKTLDTYVRPLLRTHGGDMQVVDFTDGVVKFKLHGHCAGCPAADFTTENLIQTEL 60
Query: 177 NHFVPEVKDIRTV 189
+PEVK R V
Sbjct: 61 MAHLPEVK--RAV 71
>gi|113477555|ref|YP_723616.1| Fe-S cluster assembly protein NifU [Trichodesmium erythraeum
IMS101]
gi|110168603|gb|ABG53143.1| Fe-S cluster assembly protein NifU [Trichodesmium erythraeum
IMS101]
Length = 291
Score = 86.4 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 33/69 (47%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I++VL VRP +A DGGD+ V + ++GAC C + TLK + L V
Sbjct: 223 IQQVLQQEVRPVLAEDGGDVELFDVDGDRVLVKLKGACGSCSNVLVTLKGAIEATLKERV 282
Query: 181 PEVKDIRTV 189
E + V
Sbjct: 283 SESLVVEAV 291
>gi|256372488|ref|YP_003110312.1| nitrogen-fixing NifU domain protein [Acidimicrobium ferrooxidans
DSM 10331]
gi|256009072|gb|ACU54639.1| nitrogen-fixing NifU domain protein [Acidimicrobium ferrooxidans
DSM 10331]
Length = 204
Score = 86.4 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 46/99 (46%)
Query: 91 IIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIV 150
++ + D+ S + +R+ +L +V PA+A GG G D +
Sbjct: 90 LVIENPNAPTRQSDLPEFGPEALTSDLARRVDSILQEQVNPAIAAHGGYAELVGVVDEVA 149
Query: 151 FLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
++ M G C GC AS TL G+A + VPE++D+ V
Sbjct: 150 YVLMGGGCQGCGLASATLTQGIAVAIRDAVPEIRDVVDV 188
>gi|315639115|ref|ZP_07894282.1| NifU family protein [Campylobacter upsaliensis JV21]
gi|315480819|gb|EFU71456.1| NifU family protein [Campylobacter upsaliensis JV21]
Length = 90
Score = 86.4 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD ++ +K+ L+ + P + RDGG + F G ++G+V++ + GAC GC S+ TL
Sbjct: 1 MMPFSDEELINPVKKSLEKSL-PILERDGGGLEFLGVKNGVVYVHLIGACKGCASSGITL 59
Query: 169 KYGVANILNHFV-PEV 183
KY + L + PE+
Sbjct: 60 KYSLERQLKMDIHPEI 75
>gi|284036029|ref|YP_003385959.1| nitrogen-fixing NifU domain protein [Spirosoma linguale DSM 74]
gi|283815322|gb|ADB37160.1| nitrogen-fixing NifU domain protein [Spirosoma linguale DSM 74]
Length = 88
Score = 86.4 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYG 171
++ ++ +++ LD+ +RP +A DGG++ D V L + G+C CP ++ T K G
Sbjct: 6 NNDQLISKVERALDS-MRPYLAADGGNVKVLEITEDKTVRLELVGSCGSCPMSAMTFKGG 64
Query: 172 VANILNHFVPEVKDIRTV 189
+ + VPE+ + V
Sbjct: 65 LEEAILKAVPEITKVEAV 82
>gi|154413784|ref|XP_001579921.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
gi|121914133|gb|EAY18935.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
Length = 112
Score = 86.4 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 106 GSGDFIESDSA-VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSA 164
E+D+ + QR+ ++++ +VRP + +D GDI ++G + + + GAC GC
Sbjct: 21 AKEAVKETDADKLFQRVNKIIEEKVRPFIKQDHGDIELVDIKNGCMIVQLEGACEGCGCK 80
Query: 165 SETLKYGVANILNHFVPEVKDIRT 188
+ TL GV + +PE+ +IR
Sbjct: 81 NTTLYNGVLGTVQEEIPEITNIRQ 104
>gi|295400424|ref|ZP_06810403.1| nitrogen-fixing NifU domain protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|294977699|gb|EFG53298.1| nitrogen-fixing NifU domain protein [Geobacillus
thermoglucosidasius C56-YS93]
Length = 283
Score = 86.4 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ R+ L+ VRP + GG + ++ ++GACSGC ++ TLK GV
Sbjct: 87 QDLFTRVAAALEE-VRPYMRSHGGGVELVEVEGKTAYVRLQGACSGCSLSAVTLKNGVEE 145
Query: 175 ILNHFVP 181
+ VP
Sbjct: 146 AIKARVP 152
>gi|253746010|gb|EET01549.1| Hypothetical protein GL50581_1173 [Giardia intestinalis ATCC 50581]
Length = 197
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 8/159 (5%)
Query: 36 AEISPLASRIFSIPGIASVYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHN 94
E S L + + G+ + +TV + Q W +R + I F P +
Sbjct: 40 PEASSLQCDLLKVKGVKKLSITPTGVTVTVRSQGLWPSIRSEIENKIYSAFDPDTPHTPD 99
Query: 95 GGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR---DG-IV 150
++ D + +G S+ + + + ++ + P +ARDGG +K Y +G IV
Sbjct: 100 ELRLAIQ-DILSTGSLSPSN--IRKASELLIRAAINPFLARDGGSCSYKRYESTDEGLIV 156
Query: 151 FLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
++ + G CSGC ++ T+ V ++P V ++ +
Sbjct: 157 YIELHGNCSGCSKSANTMNNFVIGEFKKYIPNVSTVKCI 195
>gi|186680893|ref|YP_001864089.1| Rieske (2Fe-2S) domain-containing protein [Nostoc punctiforme PCC
73102]
gi|186463345|gb|ACC79146.1| Rieske (2Fe-2S) domain protein [Nostoc punctiforme PCC 73102]
Length = 281
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 3/118 (2%)
Query: 74 RPPVLGMIMEHFISGDPIIHNGGLGDMKLDDM-GSGDFIESDSAVVQRIKEVLDNRVRPA 132
+ + +I P + + ++ + + QRI+ L+ VRP
Sbjct: 41 KAALTNLIKNLKQESMPALRHAVADELVYAVLLYHELVKPPKPPLAQRIETALEE-VRPG 99
Query: 133 VARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+ GD+ + V + + G CS CP+++ TL GV + + PE+ + V
Sbjct: 100 LKSHDGDVELVAIKSPDTVEVRLIGTCSSCPASTLTLSQGVEQAIKNHCPEITKVVAV 157
>gi|317472464|ref|ZP_07931786.1| NifU domain-containing protein [Anaerostipes sp. 3_2_56FAA]
gi|316900037|gb|EFV22029.1| NifU domain-containing protein [Anaerostipes sp. 3_2_56FAA]
Length = 99
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 46/73 (63%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+++ I++VL+ VRP + G++ Y++GI+ + + G CSGCPSA+ T + +A +
Sbjct: 1 MLREIEKVLEEDVRPYLLEHEGNVRISEYKEGILKVRLTGQCSGCPSAALTTEELIAEAV 60
Query: 177 NHFVPEVKDIRTV 189
+PEVKD+ V
Sbjct: 61 KKKIPEVKDVVLV 73
>gi|317153414|ref|YP_004121462.1| Fe-S cluster assembly protein NifU [Desulfovibrio aespoeensis
Aspo-2]
gi|316943665|gb|ADU62716.1| Fe-S cluster assembly protein NifU [Desulfovibrio aespoeensis
Aspo-2]
Length = 283
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLS 153
G+ + ++ + I+ V+DN +RP + DGGDI V +
Sbjct: 188 GEGVCQTPSEGPAHPAQGMTNIQRMHLIESVIDNEIRPMLQADGGDIRLVDIDRQTVVVK 247
Query: 154 MRGACSGCPSASETLKYGVANILNHFV-PEVKDIRT 188
G CS CPS+ TL+ + L V PE++ +R
Sbjct: 248 FIGMCSNCPSSHLTLQNVIEAKLKEKVDPEIR-VRE 282
>gi|15839192|ref|NP_299880.1| hypothetical protein XF2603 [Xylella fastidiosa 9a5c]
gi|9107825|gb|AAF85400.1|AE004067_7 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 176
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVA 173
+++V+R+ V++N + P +A GG + + +G+V L G C GC TLK GV
Sbjct: 84 ASLVERVCWVVENEINPQLASHGGRVEVQEVSAEGVVLLRFGGGCHGCGMVDVTLKQGVE 143
Query: 174 NILNHFVPEVKDIRT 188
L V V +R
Sbjct: 144 KTLMERVHGVIAVRD 158
>gi|255321743|ref|ZP_05362898.1| NifU family protein [Campylobacter showae RM3277]
gi|255301223|gb|EET80485.1| NifU family protein [Campylobacter showae RM3277]
Length = 89
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+D +++ +K L +V P + DGG + G ++G +++ + G C GC ++S TL
Sbjct: 1 MIPFTDEELLKPVKASLQ-KVLPMLENDGGGMELLGIKNGKIYVRLTGHCHGCAASSTTL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
KYG+ L + PE++ +
Sbjct: 60 KYGIERQLRMDIHPELEVV 78
>gi|218439087|ref|YP_002377416.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7424]
gi|218171815|gb|ACK70548.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7424]
Length = 293
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 45/110 (40%)
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGD 139
I + ++ SG ++ +Q I++VL+ VRP + DGG+
Sbjct: 184 AIDDILAEVAQEKAKAVEVATEVVTASSGFGQLTNLKKIQLIEQVLEKEVRPILKADGGN 243
Query: 140 IVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+ + + ++GAC C ++ TLK+ + + L + + V
Sbjct: 244 VELYDVEGHRIKVVLKGACGSCAGSTATLKHAIEDKLRELIDSTLVVEAV 293
>gi|290967833|ref|ZP_06559386.1| NifU-like protein [Megasphaera genomosp. type_1 str. 28L]
gi|290782192|gb|EFD94767.1| NifU-like protein [Megasphaera genomosp. type_1 str. 28L]
Length = 94
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 43/69 (62%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+++ +L ++RP++ GG++ Y DGI+ + + G CSGCPSA+ T + + I+
Sbjct: 5 AQLETLLAEKIRPSLQAHGGNVEIISYTDGILRIRLTGRCSGCPSATLTTEEFINQIVQT 64
Query: 179 FVPEVKDIR 187
P+V+++R
Sbjct: 65 AFPDVREVR 73
>gi|305666181|ref|YP_003862468.1| Nitrogen-fixing NifU-like protein [Maribacter sp. HTCC2170]
gi|88707679|gb|EAQ99920.1| Nitrogen-fixing NifU-like protein [Maribacter sp. HTCC2170]
Length = 79
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYG 171
+ + + +++ L+ +RP + DGGDI D V + ++GAC GC TLK G
Sbjct: 2 TSTELKINVEKALEE-IRPFLQSDGGDIELVSIDNDSSVKVKLQGACVGCSVNQMTLKSG 60
Query: 172 VANILNHFVPEVKDIRTV 189
V + + P+++++ +
Sbjct: 61 VEMTIKKYAPQIEEVINI 78
>gi|300776481|ref|ZP_07086339.1| nitrogen fixation protein NifU [Chryseobacterium gleum ATCC 35910]
gi|300501991|gb|EFK33131.1| nitrogen fixation protein NifU [Chryseobacterium gleum ATCC 35910]
Length = 82
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
V R+ E L++ +RP + +DGGDI +D VF+ + G CSGC TLK GV N
Sbjct: 8 EDTVTRVMEALES-IRPFLNKDGGDIELIDVKDNQVFVKLLGNCSGCSLNFSTLKLGVEN 66
Query: 175 ILNHFVPEVKDIRTV 189
+ PE++ + V
Sbjct: 67 TIKQHAPEIEKVINV 81
>gi|262375821|ref|ZP_06069053.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262309424|gb|EEY90555.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
Length = 212
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D++V +RI VL + + P +A GG+ ++ L G C GC + TL
Sbjct: 120 DASVEERITYVLQSEINPGLAGHGGNCALVEVKEDPEKGLTAVLKFGGGCQGCSAIDITL 179
Query: 169 KYGVANILNHFVPEVKDIRT 188
K GV L VPE+ +
Sbjct: 180 KQGVETTLKQHVPELMHVVD 199
>gi|332702422|ref|ZP_08422510.1| Fe-S cluster assembly protein NifU [Desulfovibrio africanus str.
Walvis Bay]
gi|332552571|gb|EGJ49615.1| Fe-S cluster assembly protein NifU [Desulfovibrio africanus str.
Walvis Bay]
Length = 285
Score = 86.0 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVAR 135
+ ++ME P + + K ++ +Q + +V+D +RP++ +
Sbjct: 177 DIERLLMEVRGEQAPAEGVAPVVEEKKPKRL------TNIQRMQLVSKVIDEEIRPSLKK 230
Query: 136 DGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV-PEV 183
DGGDI V +S+RGAC GCPSA TLK V L V P++
Sbjct: 231 DGGDIELIDIDGLNVVVSLRGACVGCPSAQLTLKQLVERRLRETVEPDI 279
>gi|258591187|emb|CBE67482.1| conserved protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length = 197
Score = 86.0 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 38/72 (52%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
V ++ V+D R+ P VA GG + +DGI +++ G C GC A TLK GVA
Sbjct: 101 DPVAAAVQRVIDARINPGVAAHGGYVTLLDVKDGIAYITFGGGCHGCGMADVTLKQGVAV 160
Query: 175 ILNHFVPEVKDI 186
+ VPE+ +
Sbjct: 161 EIQKAVPEIHQV 172
>gi|312141489|ref|YP_004008825.1| fe-s cluster assembly protein nifu-like [Rhodococcus equi 103S]
gi|311890828|emb|CBH50147.1| putative Fe-S cluster assembly protein NifU-like [Rhodococcus equi
103S]
Length = 311
Score = 86.0 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN 174
V R++ LD+ VRP + GGD+ DG+V L + G+C GCPS++ TL+ V
Sbjct: 94 DVETRVRTALDS-VRPYLGSHGGDVELVDVTDDGVVRLRLLGSCHGCPSSAVTLQLAVEG 152
Query: 175 ILNHFVPEVKDIR 187
+ PE I
Sbjct: 153 AVQAAAPETTAIE 165
>gi|4140376|gb|AAD03815.1| NifU [Trichodesmium erythraeum IMS101]
Length = 179
Score = 86.0 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 33/69 (47%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I++VL VRP +A DGGD+ V + ++GAC C + TLK + L V
Sbjct: 111 IQQVLQQEVRPVLAEDGGDVELFDVDGDRVLVKLKGACGSCSNVLVTLKGAIEATLKERV 170
Query: 181 PEVKDIRTV 189
E + V
Sbjct: 171 SESLVVEAV 179
>gi|325677298|ref|ZP_08156964.1| Rieske family iron-sulfur cluster-binding protein [Rhodococcus equi
ATCC 33707]
gi|325551995|gb|EGD21691.1| Rieske family iron-sulfur cluster-binding protein [Rhodococcus equi
ATCC 33707]
Length = 311
Score = 85.6 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN 174
V R++ LD+ VRP + GGD+ DG+V L + G+C GCPS++ TL+ V
Sbjct: 94 DVETRVRTALDS-VRPYLGSHGGDVELVDVTDDGVVRLRLLGSCHGCPSSAVTLQLAVEG 152
Query: 175 ILNHFVPEVKDIR 187
+ PE I
Sbjct: 153 AVQAAAPETTAIE 165
>gi|332520071|ref|ZP_08396535.1| nitrogen-fixing NifU domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332044630|gb|EGI80824.1| nitrogen-fixing NifU domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 80
Score = 85.6 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYG 171
+ + +++ L+ +RP + DGGDI D V + ++GAC GC TLK G
Sbjct: 2 TTEELRLNVEKALEE-IRPFLQSDGGDITLLSIEDDKLVKVQLQGACVGCSVNQMTLKSG 60
Query: 172 VANILNHFVPEVKDIRTV 189
V + + P+++ + +
Sbjct: 61 VEMTIKKYAPQIEKVINI 78
>gi|77917669|ref|YP_355484.1| Fe-S cluster assembly protein NifU [Pelobacter carbinolicus DSM
2380]
gi|77543752|gb|ABA87314.1| Fe-S cluster assembly protein NifU [Pelobacter carbinolicus DSM
2380]
Length = 281
Score = 85.6 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ I+E+L+ + P + DGGD+ V +++RG CS CP +S TLK+ V L
Sbjct: 208 IRLIEEILEREILPPIRSDGGDLELIDIDGSKVLVALRGTCSFCPQSSFTLKHFVEAKLR 267
Query: 178 HFV-PEVKDIRTV 189
FV PE+ ++ V
Sbjct: 268 EFVSPEI-EVEEV 279
>gi|89095072|ref|ZP_01167999.1| yhgI protein [Oceanospirillum sp. MED92]
gi|89080633|gb|EAR59878.1| yhgI protein [Oceanospirillum sp. MED92]
Length = 197
Score = 85.6 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY----RDGIVFLSMRGACSGCPSASETLK 169
DS + ++I +L + + P +A GGD+ I L G C GC + TLK
Sbjct: 106 DSPIDEQINYILYSEINPGLAAHGGDVKLMEVVEEEEGHIAVLQFGGGCQGCSAVDMTLK 165
Query: 170 YGVANILNHFVPEVKDIRTV 189
GV L + + +R V
Sbjct: 166 DGVEATLVERIDSLVGVRDV 185
>gi|123434403|ref|XP_001308803.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
gi|121890501|gb|EAX95873.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
Length = 114
Score = 85.6 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 46/85 (54%)
Query: 104 DMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPS 163
+ + +R+ ++++ +VRP + +GGDI ++G + +S+ GAC+ C S
Sbjct: 21 AKAAEKPKVDGDELFKRVNKIIEEKVRPFIRSEGGDIELVDIKNGCMIVSLEGACTHCGS 80
Query: 164 ASETLKYGVANILNHFVPEVKDIRT 188
+ TL GV + +PE+++IR
Sbjct: 81 KNNTLYNGVLGAVQDEIPEIENIRQ 105
>gi|78776531|ref|YP_392846.1| nitrogen-fixing NifU-like protein [Sulfurimonas denitrificans DSM
1251]
gi|78497071|gb|ABB43611.1| Nitrogen-fixing NifU-like protein [Sulfurimonas denitrificans DSM
1251]
Length = 91
Score = 85.6 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+D ++ ++ V+D +VRP++A D GDI F ++ V++ ++GAC GC S+ TL
Sbjct: 1 MIPFTDEELMNPVRNVID-KVRPSLALDSGDISFITVKNSKVYIQLKGACVGCASSGTTL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
KYGV L + PE+ I
Sbjct: 60 KYGVERQLKMDIHPEITVI 78
>gi|227536025|ref|ZP_03966074.1| NifU family protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227244138|gb|EEI94153.1| NifU family protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 93
Score = 85.6 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +R+++ LD +RP + DGG++ + + +V L + GAC+ C + T K G+
Sbjct: 3 LHERVEQALDT-IRPYLETDGGNVSLEEITPENVVKLKLTGACASCSMSIMTFKAGLEQA 61
Query: 176 LNHFVPEVKDIRT 188
+ VPE+ +
Sbjct: 62 IKKAVPEITSVEA 74
>gi|28199845|ref|NP_780159.1| hypothetical protein PD1979 [Xylella fastidiosa Temecula1]
gi|182682596|ref|YP_001830756.1| HesB/YadR/YfhF-family protein [Xylella fastidiosa M23]
gi|51702170|sp|Q87A52|NFUA_XYLFT RecName: Full=Fe/S biogenesis protein nfuA
gi|254767337|sp|B2I9W5|NFUA_XYLF2 RecName: Full=Fe/S biogenesis protein nfuA
gi|28057966|gb|AAO29808.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
gi|182632706|gb|ACB93482.1| HesB/YadR/YfhF-family protein [Xylella fastidiosa M23]
gi|307578878|gb|ADN62847.1| HesB/YadR/YfhF-family protein [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 199
Score = 85.6 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVA 173
+++V+R+ V++N + P +A GG + + +G+V L G C GC A TLK GV
Sbjct: 107 ASLVERVCWVVENEINPQLASHGGRVEVQEVSAEGVVLLRFGGGCHGCGMADVTLKQGVE 166
Query: 174 NILNHFVPEVKDIRT 188
L V V +R
Sbjct: 167 KTLMDRVHGVIAVRD 181
>gi|150025719|ref|YP_001296545.1| NifU-like protein [Flavobacterium psychrophilum JIP02/86]
gi|149772260|emb|CAL43736.1| NifU-like protein [Flavobacterium psychrophilum JIP02/86]
Length = 79
Score = 85.6 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYG 171
+ + +++ L+ +RP + DGGDI D V + ++GAC+ C + T++ G
Sbjct: 2 TPEELTLNVEKALEE-IRPFLNSDGGDIELVSIEDSKHVKVRLQGACNSCSVSQMTMRAG 60
Query: 172 VANILNHFVPEVKDIRTV 189
V + + P+++ + +
Sbjct: 61 VETTIKKYAPQIETVVNI 78
>gi|303246717|ref|ZP_07332995.1| Fe-S cluster assembly protein NifU [Desulfovibrio fructosovorans
JJ]
gi|302492057|gb|EFL51935.1| Fe-S cluster assembly protein NifU [Desulfovibrio fructosovorans
JJ]
Length = 279
Score = 85.2 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ V+R+ +V+D +RP + +DGGDI V +++RGAC GCP ++ TL V
Sbjct: 201 TNLERVKRVTQVMDEEIRPNLKKDGGDIELLDIEGKTVLVALRGACQGCPVSNVTLTEFV 260
Query: 173 ANILNHFV-PEVK 184
L V P++
Sbjct: 261 QKRLRELVEPDIT 273
>gi|262368793|ref|ZP_06062122.1| IscR-regulated protein YhgI [Acinetobacter johnsonii SH046]
gi|262316471|gb|EEY97509.1| IscR-regulated protein YhgI [Acinetobacter johnsonii SH046]
Length = 215
Score = 85.2 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI +L + + P +A GG+ + L G C GC + TL
Sbjct: 123 DASIEERITYILQSEINPGLAGHGGNCALVEVVEDEEHGLTAVLKFGGGCQGCSAIDVTL 182
Query: 169 KYGVANILNHFVPEVKDIRT 188
K GV L +PE++ +
Sbjct: 183 KQGVETTLQQHIPELRRVID 202
>gi|218887746|ref|YP_002437067.1| Fe-S cluster assembly protein NifU [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758700|gb|ACL09599.1| Fe-S cluster assembly protein NifU [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 281
Score = 85.2 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ +Q + +VL+ +RP + +DGGDI V++++RG C+ CPS+ TL+ V
Sbjct: 203 TNVQRMQLVLKVLEGEIRPRLQQDGGDIELVDMDGTTVYVALRGMCTSCPSSRLTLEGFV 262
Query: 173 ANILNHFVPEVKDIRT 188
L V E ++
Sbjct: 263 EKTLRDHVDENIVVKE 278
>gi|126434715|ref|YP_001070406.1| NifU domain-containing protein [Mycobacterium sp. JLS]
gi|126234515|gb|ABN97915.1| nitrogen-fixing NifU domain protein [Mycobacterium sp. JLS]
Length = 294
Score = 85.2 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 71 EHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDM--GSGDFIESDSAVVQRIKEVLDNR 128
L LG +++ +S DP + + D + + G S V +RI + LD
Sbjct: 50 TDLYGAALGRMLDLAVSADPDLVDAVAADPLVASLLLVHGMHPHS---VERRITDALDT- 105
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
VRP + GGD+ G L G+C CPS++ TL+ V + + PE++ I
Sbjct: 106 VRPYLGSHGGDVHLLGVDGDTARLRFAGSCKSCPSSAVTLELAVEDAIRAAAPEIETIEV 165
Query: 189 V 189
V
Sbjct: 166 V 166
>gi|326798778|ref|YP_004316597.1| nitrogen-fixing NifU domain-containing protein [Sphingobacterium
sp. 21]
gi|326549542|gb|ADZ77927.1| nitrogen-fixing NifU domain-containing protein [Sphingobacterium
sp. 21]
Length = 92
Score = 85.2 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +R++E L+ +RP + DGG++ + + +V L + G+C+ C + T K G+
Sbjct: 3 LQERVEEALNT-LRPYLEADGGNVTIEEITSENVVRLRLLGSCASCSMSIMTFKAGLEQA 61
Query: 176 LNHFVPEVKDIRTV 189
+ VPE+ + +
Sbjct: 62 IQKAVPEITAVEAI 75
>gi|169633930|ref|YP_001707666.1| putative membrane-bound protein in GNT I transport system (GntY)
[Acinetobacter baumannii SDF]
gi|254767285|sp|B0VSR5|NFUA_ACIBS RecName: Full=Fe/S biogenesis protein nfuA
gi|169152722|emb|CAP01733.1| putative membrane-bound protein in GNT I transport system (GntY)
[Acinetobacter baumannii]
Length = 212
Score = 85.2 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D+++ +RI VL + P +A GG+ +D L G C GC + TL
Sbjct: 120 DASIEERITYVLQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLKFGGGCQGCSAIDVTL 179
Query: 169 KYGVANILNHFVPEVKDIRT 188
K GV L + E++ +
Sbjct: 180 KQGVETTLKEHILELQRVVD 199
>gi|312111050|ref|YP_003989366.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y4.1MC1]
gi|311216151|gb|ADP74755.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y4.1MC1]
Length = 283
Score = 85.2 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ R+ L+ VRP + GG + ++ ++GACSGC ++ TLK GV
Sbjct: 87 QDLFTRVAVALEE-VRPYMRSHGGGVELVEVEGKTAYVRLQGACSGCSLSAVTLKNGVEE 145
Query: 175 ILNHFVP 181
+ VP
Sbjct: 146 AIKARVP 152
>gi|300771723|ref|ZP_07081598.1| NifU family protein [Sphingobacterium spiritivorum ATCC 33861]
gi|300761712|gb|EFK58533.1| NifU family protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 93
Score = 85.2 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +R+++ LD +RP + DGG++ + + +V L + GAC+ C + T K G+
Sbjct: 3 LHERVEQALDT-IRPYLETDGGNVSLEEITPENVVKLKLTGACASCSMSIMTFKAGLEQA 61
Query: 176 LNHFVPEVKDIRT 188
+ VPE+ +
Sbjct: 62 IKKAVPEITSVEA 74
>gi|320354022|ref|YP_004195361.1| nitrogen-fixing NifU domain-containing protein [Desulfobulbus
propionicus DSM 2032]
gi|320122524|gb|ADW18070.1| nitrogen-fixing NifU domain protein [Desulfobulbus propionicus DSM
2032]
Length = 77
Score = 84.8 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVA 173
+ + + +VL ++RP + RDGGD+ F D I+ + + GAC GCP + TLK G+
Sbjct: 2 EQLQETVIKVL-AQIRPTLQRDGGDVEFVELGPDQILKVRLTGACQGCPMSRITLKEGIE 60
Query: 174 NILNHFVPEVKDIRTV 189
+ +P ++ + V
Sbjct: 61 KFVKGELPTIRAVEAV 76
>gi|169333923|ref|ZP_02861116.1| hypothetical protein ANASTE_00309 [Anaerofustis stercorihominis DSM
17244]
gi|169259488|gb|EDS73454.1| hypothetical protein ANASTE_00309 [Anaerofustis stercorihominis DSM
17244]
Length = 100
Score = 84.8 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 49/75 (65%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
S ++++I++VL+ +VRP++ GGD+V K Y D I+ + + G CSGCP+A T + +
Sbjct: 9 SMMIEKIEKVLNEKVRPSLNSHGGDVVIKSYEDNILRIKLIGKCSGCPAARTTNEDLIKI 68
Query: 175 ILNHFVPEVKDIRTV 189
+ +PEVKD+ +
Sbjct: 69 SVMEEIPEVKDVILI 83
>gi|219113897|ref|XP_002176135.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402927|gb|EEC42886.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 77
Score = 84.8 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG--IVFLSMRGACSGCPSASETLKYGVAN 174
+ + +VLD VRP + DGG++ + V+L + GAC C S++ T++ G+
Sbjct: 1 TIDGVDKVLDE-VRPYLISDGGNVSVESVDADSQTVYLKLEGACGSCSSSTVTMQMGIER 59
Query: 175 ILNHFVPEVKDIRTV 189
+L P ++++ V
Sbjct: 60 VLKEKYPNLREVLQV 74
>gi|218667970|ref|YP_002425198.1| iron-sulfur cluster-binding protein, Rieske family
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|218520183|gb|ACK80769.1| iron-sulfur cluster-binding protein, Rieske family
[Acidithiobacillus ferrooxidans ATCC 23270]
Length = 296
Score = 84.8 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +RI+ LD+ VRP + GG++ R V L + G+C GCPS+S TL GV
Sbjct: 93 LQERIEAALDS-VRPGLEGHGGNVELVELRLPDTVILRLLGSCHGCPSSSLTLSDGVEKA 151
Query: 176 LNHFVPEVKDIR 187
+ PE++ I
Sbjct: 152 IRDACPEIRHIE 163
>gi|198282994|ref|YP_002219315.1| Rieske (2Fe-2S) domain-containing protein [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|198247515|gb|ACH83108.1| Rieske (2Fe-2S) domain protein [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 301
Score = 84.8 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +RI+ LD+ VRP + GG++ R V L + G+C GCPS+S TL GV
Sbjct: 98 LQERIEAALDS-VRPGLEGHGGNVELVELRLPDTVILRLLGSCHGCPSSSLTLSDGVEKA 156
Query: 176 LNHFVPEVKDIR 187
+ PE++ I
Sbjct: 157 IRDACPEIRHIE 168
>gi|121534267|ref|ZP_01666091.1| nitrogen-fixing NifU domain protein [Thermosinus carboxydivorans
Nor1]
gi|121307037|gb|EAX47955.1| nitrogen-fixing NifU domain protein [Thermosinus carboxydivorans
Nor1]
Length = 98
Score = 84.8 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
I++VLD +VRP++ GGDI + DG + + + GACS CP A +TL V L
Sbjct: 8 IQQVLDEKVRPSLLSHGGDISLQEITDDGYIKVRLTGACSTCPGAQQTLAEVVEAALRDA 67
Query: 180 VPEVKDIRTV 189
P+++ + V
Sbjct: 68 CPDLQGVIPV 77
>gi|91201114|emb|CAJ74173.1| strongly similar to iron sulfur [Fe-S] cofactor protein NifU
[Candidatus Kuenenia stuttgartiensis]
Length = 284
Score = 84.8 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ ++ ++E ++ +RPA+ DGGDI V +S RG+CS CPS+ TLK V
Sbjct: 206 TNIQKMKLVQETIEREIRPALLADGGDIELIDIDGDRVMVSFRGSCSACPSSGVTLKSTV 265
Query: 173 ANILNHFVPEVKDIRTV 189
L FV + + V
Sbjct: 266 EAKLREFVTDTLIVEEV 282
>gi|163787250|ref|ZP_02181697.1| NifU-like protein [Flavobacteriales bacterium ALC-1]
gi|159877138|gb|EDP71195.1| NifU-like protein [Flavobacteriales bacterium ALC-1]
Length = 79
Score = 84.8 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYG 171
S + +++ LD +RP + DGGDI D V + + GAC+ C TLK G
Sbjct: 2 SSEELRLNVEKALDE-IRPFLQSDGGDIALLSIEDDKFVKVQLEGACTSCSVNQMTLKSG 60
Query: 172 VANILNHFVPEVKDIRTV 189
V + + P+++ + V
Sbjct: 61 VEMTIKKYAPQIEKVINV 78
>gi|312132200|ref|YP_003999540.1| nitrogeN-fixing nifu domain protein [Leadbetterella byssophila DSM
17132]
gi|311908746|gb|ADQ19187.1| nitrogen-fixing NifU domain protein [Leadbetterella byssophila DSM
17132]
Length = 83
Score = 84.8 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIV-FKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
+ ++++ LDN +RP + DGG++ + D +V L G+C CP +S T K G+
Sbjct: 2 EDLNVKVEQALDN-IRPYLIADGGNVKVLEITEDKVVKLEFTGSCGSCPMSSMTFKAGLE 60
Query: 174 NILNHFVPEVKDIRTV 189
+ VPE+K + V
Sbjct: 61 EAILKNVPEIKSVEAV 76
>gi|149278153|ref|ZP_01884291.1| hypothetical protein PBAL39_11367 [Pedobacter sp. BAL39]
gi|149230919|gb|EDM36300.1| hypothetical protein PBAL39_11367 [Pedobacter sp. BAL39]
Length = 100
Score = 84.8 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYG 171
+ + Q++++ L+ +RP + DGG++ + + +V L + G C C + T+K G
Sbjct: 18 TKMDLTQQVEQALET-IRPYLIADGGNVEIEEITAENVVKLKLLGNCGSCKMSFMTMKAG 76
Query: 172 VANILNHFVPEVKDIRTV 189
+ + VP++ + V
Sbjct: 77 IEQAILKAVPQITSVVAV 94
>gi|149195166|ref|ZP_01872257.1| Nitrogen-fixing NifU-like protein [Caminibacter mediatlanticus
TB-2]
gi|149134718|gb|EDM23203.1| Nitrogen-fixing NifU-like protein [Caminibacter mediatlanticus
TB-2]
Length = 98
Score = 84.8 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASET 167
D S+ + + + V++ +RP + DGGD+ + IVF+ ++G C GC SA T
Sbjct: 2 ADIPFSNEDLKEAVAGVIEE-IRPMLQMDGGDVKLIDVKKPIVFVQLQGGCVGCASAGAT 60
Query: 168 LKYGVANILNHFV 180
LKYG+ L +
Sbjct: 61 LKYGIEKALKEKI 73
>gi|331700077|ref|YP_004336316.1| nitrogen-fixing NifU domain-containing protein [Pseudonocardia
dioxanivorans CB1190]
gi|326954766|gb|AEA28463.1| nitrogen-fixing NifU domain-containing protein [Pseudonocardia
dioxanivorans CB1190]
Length = 306
Score = 84.5 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
VRP + GGD+ F DG+ ++ + GAC+GC ++ TL+ V L VP ++ +
Sbjct: 113 TTVRPQLQSHGGDVAFAHVADGVAYVRLEGACNGCSMSAVTLRNLVEEALVAQVPAIRSV 172
Query: 187 R 187
Sbjct: 173 E 173
>gi|139438470|ref|ZP_01771986.1| Hypothetical protein COLAER_00976 [Collinsella aerofaciens ATCC
25986]
gi|133776009|gb|EBA39829.1| Hypothetical protein COLAER_00976 [Collinsella aerofaciens ATCC
25986]
Length = 67
Score = 84.5 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 140 IVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+ + G D G+V L ++GAC+GCP +S TL G+ IL VP V + V
Sbjct: 1 MEYVGVDDEGVVKLELQGACAGCPMSSLTLSMGIERILKEHVPGVTRVEQV 51
>gi|223038428|ref|ZP_03608722.1| NifU family protein [Campylobacter rectus RM3267]
gi|222880285|gb|EEF15372.1| NifU family protein [Campylobacter rectus RM3267]
Length = 146
Score = 84.5 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+D +++ + L +V P + DGG + G ++G +++ + G C GC +++ TL
Sbjct: 58 MIPFTDEELLKPVSASLQ-KVLPMLENDGGGMELLGIKNGKIYVRLTGHCHGCAASTTTL 116
Query: 169 KYGVANILNHFV-PEVKDI 186
KYG+ L + PE++ I
Sbjct: 117 KYGIERQLRIDIHPELEVI 135
>gi|315283493|ref|ZP_07871670.1| nitrogen fixation protein NifU [Listeria marthii FSL S4-120]
gi|313612862|gb|EFR86827.1| nitrogen fixation protein NifU [Listeria marthii FSL S4-120]
Length = 78
Score = 84.5 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ + L + RP + RDGGD +DGIV + + GAC CPS+ TLK G+ L
Sbjct: 7 AEVDKAL-KKFRPFLVRDGGDYELVEVTQDGIVKIKLLGACETCPSSDMTLKMGIELTLA 65
Query: 178 HFVPEVKDIRTV 189
+ K++ V
Sbjct: 66 EKIIGFKEVVQV 77
>gi|165909938|gb|ABY73882.1| thioredoxin-like protein [Flammeovirga yaeyamensis]
Length = 233
Score = 84.5 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETL 168
D++V + I VL + + P +A GG+ ++ L G C GC + TL
Sbjct: 141 DASVEEHITYVLQSEINPGLAGHGGNCALVEVKEDPEKGLTAVLKFGGGCQGCSAIDITL 200
Query: 169 KYGVANILNHFVPEVKDIRT 188
K GV L +PE+ ++
Sbjct: 201 KQGVETTLKQHIPELMNVVD 220
>gi|116515272|ref|YP_802901.1| GNT I transport systemmembrane-bound protein [Buchnera aphidicola
str. Cc (Cinara cedri)]
gi|122285332|sp|Q056Z1|NFUA_BUCCC RecName: Full=Fe/S biogenesis protein nfuA
gi|116257126|gb|ABJ90808.1| GNT I transport systemmembrane-bound protein [Buchnera aphidicola
str. Cc (Cinara cedri)]
Length = 193
Score = 84.5 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVA 173
S + IK L ++ P + GG + D G+VFL G C+GC TLK G+
Sbjct: 107 SQLQNSIKNFLTTQINPKLLLHGGSVALYDITDSGVVFLKFSGGCNGCSMIDITLKKGIE 166
Query: 174 NILNHFVPEVKDIRTV 189
L PE+ + V
Sbjct: 167 KKLIKNFPEISSVEDV 182
>gi|108799109|ref|YP_639306.1| nitrogen-fixing NifU-like protein [Mycobacterium sp. MCS]
gi|119868224|ref|YP_938176.1| NifU domain-containing protein [Mycobacterium sp. KMS]
gi|108769528|gb|ABG08250.1| nitrogen-fixing NifU-like protein [Mycobacterium sp. MCS]
gi|119694313|gb|ABL91386.1| nitrogen-fixing NifU domain protein [Mycobacterium sp. KMS]
Length = 294
Score = 84.5 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 71 EHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDM--GSGDFIESDSAVVQRIKEVLDNR 128
L LG +++ +S DP + + D + + G S V +RI + LD
Sbjct: 50 TDLYGAALGRMLDLAVSVDPDLVDAVAADPLVASLLLVHGMHPHS---VERRITDALDT- 105
Query: 129 VRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
VRP + GGD+ G L G+C CPS++ TL+ V + + PE++ I
Sbjct: 106 VRPYLGSHGGDVHLLGVDGDTARLRFAGSCKSCPSSAVTLELAVEDAIRAAAPEIETIEV 165
Query: 189 V 189
V
Sbjct: 166 V 166
>gi|296271179|ref|YP_003653811.1| nitrogen-fixing NifU domain-containing protein [Thermobispora
bispora DSM 43833]
gi|296093966|gb|ADG89918.1| nitrogen-fixing NifU domain protein [Thermobispora bispora DSM
43833]
Length = 289
Score = 84.5 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+ +RP V GGD+ DG+ ++ ++GAC+GC + + L+ G+ L VP + +
Sbjct: 99 DAIRPMVRSHGGDVELVRVEDGVAYVRLKGACTGCSAPAVALREGIEEALIERVPAITRV 158
Query: 187 R 187
Sbjct: 159 E 159
>gi|239906346|ref|YP_002953087.1| nitrogen fixation protein NifU [Desulfovibrio magneticus RS-1]
gi|239796212|dbj|BAH75201.1| nitrogen fixation protein NifU [Desulfovibrio magneticus RS-1]
Length = 281
Score = 84.1 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Query: 83 EHFISGDPIIHNGGLGDMKLDDMG-SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIV 141
+ I+ + K + ++ ++ + +V++ +RP + +DGGDI
Sbjct: 173 DCLEKLAAILADELGQAAKKPLVELEVKRPMTNLERMKLVTKVMEEEIRPNLKKDGGDIE 232
Query: 142 FKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV-PEVK 184
VF+S+RGAC GCPS++ TL V L V P +
Sbjct: 233 LVDIDGQTVFVSLRGACKGCPSSNVTLTEFVQKRLQELVEPGIT 276
>gi|123976981|ref|XP_001314690.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
gi|121897307|gb|EAY02432.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
Length = 103
Score = 84.1 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 42/81 (51%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ F ++ ++ V+D RVRP + DGGDIV K DGIV + + G CSGCPS
Sbjct: 15 ANFFAKATKEFFDKVNAVIDERVRPVLQMDGGDIVLKDITDGIVSVQLTGHCSGCPSRKN 74
Query: 167 TLKYGVANILNHFVPEVKDIR 187
TL G+ L E + +
Sbjct: 75 TLNAGILGCLQEEFGEKEIVE 95
>gi|16804435|ref|NP_465920.1| hypothetical protein lmo2397 [Listeria monocytogenes EGD-e]
gi|47095874|ref|ZP_00233478.1| NifU family protein [Listeria monocytogenes str. 1/2a F6854]
gi|224500156|ref|ZP_03668505.1| hypothetical protein LmonF1_10934 [Listeria monocytogenes Finland
1988]
gi|224503455|ref|ZP_03671762.1| hypothetical protein LmonFR_13257 [Listeria monocytogenes FSL
R2-561]
gi|254827975|ref|ZP_05232662.1| NifU family protein [Listeria monocytogenes FSL N3-165]
gi|254831180|ref|ZP_05235835.1| hypothetical protein Lmon1_07458 [Listeria monocytogenes 10403S]
gi|254900468|ref|ZP_05260392.1| hypothetical protein LmonJ_11657 [Listeria monocytogenes J0161]
gi|254913294|ref|ZP_05263306.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937675|ref|ZP_05269372.1| NifU family protein [Listeria monocytogenes F6900]
gi|284802839|ref|YP_003414704.1| hypothetical protein LM5578_2596 [Listeria monocytogenes 08-5578]
gi|284995980|ref|YP_003417748.1| hypothetical protein LM5923_2545 [Listeria monocytogenes 08-5923]
gi|16411885|emb|CAD00475.1| lmo2397 [Listeria monocytogenes EGD-e]
gi|47015751|gb|EAL06680.1| NifU family protein [Listeria monocytogenes str. 1/2a F6854]
gi|258600358|gb|EEW13683.1| NifU family protein [Listeria monocytogenes FSL N3-165]
gi|258610275|gb|EEW22883.1| NifU family protein [Listeria monocytogenes F6900]
gi|284058401|gb|ADB69342.1| hypothetical protein LM5578_2596 [Listeria monocytogenes 08-5578]
gi|284061447|gb|ADB72386.1| hypothetical protein LM5923_2545 [Listeria monocytogenes 08-5923]
gi|293591295|gb|EFF99629.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 78
Score = 84.1 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ + L + RP + RDGGD +DGIV + + GAC CPS+ TLK G+ L
Sbjct: 7 AEVDKAL-KKFRPFLVRDGGDYELIEVTQDGIVKIKLLGACETCPSSDMTLKMGIELTLA 65
Query: 178 HFVPEVKDIRTV 189
+ K++ V
Sbjct: 66 EKIIGFKEVVQV 77
>gi|119509243|ref|ZP_01628393.1| Nitrogen-fixing NifU-like protein [Nodularia spumigena CCY9414]
gi|119466085|gb|EAW46972.1| Nitrogen-fixing NifU-like protein [Nodularia spumigena CCY9414]
Length = 277
Score = 84.1 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSAS 165
+ +++RI L+ VRP + GD+ F + V + + G+CS CP+++
Sbjct: 75 HELIKPPQAPLIERINTALEE-VRPGLKSHDGDVEFVAIKPPDTVEVKLIGSCSSCPTST 133
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TL V + + PE+ + V
Sbjct: 134 LTLTQSVEQAIKNHCPEITKVVAV 157
>gi|154173987|ref|YP_001409127.1| NifU family protein [Campylobacter curvus 525.92]
gi|112802254|gb|EAT99598.1| NifU family protein [Campylobacter curvus 525.92]
Length = 89
Score = 84.1 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD +++ + L +V P + DGG + G ++G ++L + G C GC +++ TL
Sbjct: 1 MIPFSDEELLKPVTASLQ-KVLPMLENDGGGMELLGIKNGKIYLRLTGHCHGCAASTTTL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
KYG+ L + PE++ +
Sbjct: 60 KYGIERQLRIDIHPELEVV 78
>gi|16801558|ref|NP_471826.1| hypothetical protein lin2496 [Listeria innocua Clip11262]
gi|16415018|emb|CAC97723.1| lin2496 [Listeria innocua Clip11262]
gi|313617409|gb|EFR89807.1| YutI [Listeria innocua FSL S4-378]
gi|313622571|gb|EFR92972.1| YutI [Listeria innocua FSL J1-023]
Length = 78
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ + L + RP + RDGGD DGIV + + GAC CPS+ TLK G+ L
Sbjct: 7 AEVDKAL-KKFRPFLVRDGGDYELVEVTPDGIVKIKLLGACETCPSSDMTLKMGIELTLA 65
Query: 178 HFVPEVKDIRTV 189
+ K++ V
Sbjct: 66 EKIIGFKEVVQV 77
>gi|261886108|ref|ZP_06010147.1| NifU family protein [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 88
Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD +++ +KE L + P + +DGG + G ++G+V++ + G C GC ++S+TL
Sbjct: 1 MIPFSDEELLEPVKESL-KVIMPMLEQDGGGMELLGIKNGVVYVRLTGHCHGCAASSQTL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
KYG L+ + P++ +
Sbjct: 60 KYGAERQLSVDIHPDLSAV 78
>gi|61806099|ref|YP_214459.1| NifU-like protein [Prochlorococcus phage P-SSM2]
gi|61374608|gb|AAX44605.1| NifU-like protein [Prochlorococcus phage P-SSM2]
gi|265525310|gb|ACY76107.1| NifU domain-containing protein [Prochlorococcus phage P-SSM2]
Length = 96
Score = 83.7 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGV 172
+ + VL+ + P V DGG + F + G V + + GAC C ++ TLK G+
Sbjct: 20 ELTEENVVRVLEE-LAPYVEADGGFLQFVEIEEETGYVKVRLGGACETCAMSAMTLKQGI 78
Query: 173 ANILNHFVPEVKDIRTV 189
+ +P+ + V
Sbjct: 79 EKKVMSEIPDCVGVVQV 95
>gi|227496737|ref|ZP_03927011.1| NifU domain protein [Actinomyces urogenitalis DSM 15434]
gi|226833752|gb|EEH66135.1| NifU domain protein [Actinomyces urogenitalis DSM 15434]
Length = 177
Score = 83.7 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 20/184 (10%)
Query: 7 DTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGI-ASVYFGYDFI-TVG 64
TP+PA L++ V+ +G + F A + + G+ A + + T+
Sbjct: 10 TTPDPAVLRW-----VVPDGLLPF-TGSVARAPRMLQALLD-DGVLAGLEVVPGAVLTLL 62
Query: 65 KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEV 124
W V +++ G P G + + D + +E+
Sbjct: 63 APGRIWSEAGSAVRSALVDAL--GIPGSWEAAPGAVGVGP---------DEVLEAAAREI 111
Query: 125 LDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVK 184
+ V GG + DG+V +++ GAC CP+A T+ ++L P +
Sbjct: 112 AEGPVGQIARAHGGSFTVQRVADGVVKVALEGACQDCPAAVVTMHARFEHLLRRRCPWLV 171
Query: 185 DIRT 188
+R
Sbjct: 172 SVRE 175
>gi|46908571|ref|YP_014960.1| NifU family protein [Listeria monocytogenes serotype 4b str. F2365]
gi|47092981|ref|ZP_00230761.1| NifU family protein [Listeria monocytogenes str. 4b H7858]
gi|217963499|ref|YP_002349177.1| hypothetical protein LMHCC_0201 [Listeria monocytogenes HCC23]
gi|226224948|ref|YP_002759055.1| NifU family protein [Listeria monocytogenes Clip81459]
gi|254825479|ref|ZP_05230480.1| NifU family protein [Listeria monocytogenes FSL J1-194]
gi|254853597|ref|ZP_05242945.1| NifU family protein [Listeria monocytogenes FSL R2-503]
gi|254933176|ref|ZP_05266535.1| NifU family protein [Listeria monocytogenes HPB2262]
gi|254994154|ref|ZP_05276344.1| NifU family protein [Listeria monocytogenes FSL J2-064]
gi|255521513|ref|ZP_05388750.1| NifU family protein [Listeria monocytogenes FSL J1-175]
gi|290894179|ref|ZP_06557149.1| NifU family protein [Listeria monocytogenes FSL J2-071]
gi|300765271|ref|ZP_07075256.1| NifU family protein [Listeria monocytogenes FSL N1-017]
gi|46881843|gb|AAT05137.1| NifU family protein [Listeria monocytogenes serotype 4b str. F2365]
gi|47018635|gb|EAL09388.1| NifU family protein [Listeria monocytogenes str. 4b H7858]
gi|217332769|gb|ACK38563.1| conserved domain protein [Listeria monocytogenes HCC23]
gi|225877410|emb|CAS06124.1| Putative NifU family protein [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258606971|gb|EEW19579.1| NifU family protein [Listeria monocytogenes FSL R2-503]
gi|290556242|gb|EFD89786.1| NifU family protein [Listeria monocytogenes FSL J2-071]
gi|293584734|gb|EFF96766.1| NifU family protein [Listeria monocytogenes HPB2262]
gi|293594721|gb|EFG02482.1| NifU family protein [Listeria monocytogenes FSL J1-194]
gi|300514092|gb|EFK41154.1| NifU family protein [Listeria monocytogenes FSL N1-017]
gi|307571927|emb|CAR85106.1| NifU family protein [Listeria monocytogenes L99]
gi|313607074|gb|EFR83599.1| nitrogen fixation protein NifU [Listeria monocytogenes FSL F2-208]
gi|328471461|gb|EGF42355.1| NifU family protein [Listeria monocytogenes 220]
gi|332312829|gb|EGJ25924.1| Nitrogen-fixing NifU protein [Listeria monocytogenes str. Scott A]
Length = 78
Score = 83.7 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ + L + RP + RDGGD +DG+V + + GAC CPS+ TLK G+ L
Sbjct: 7 AEVDKAL-KKFRPFLVRDGGDYELIEVTQDGVVKIKLLGACETCPSSDMTLKMGIELTLA 65
Query: 178 HFVPEVKDIRTV 189
+ K++ V
Sbjct: 66 EKIIGFKEVVQV 77
>gi|317495423|ref|ZP_07953792.1| NifU domain-containing protein [Gemella moribillum M424]
gi|316914482|gb|EFV35959.1| NifU domain-containing protein [Gemella moribillum M424]
Length = 84
Score = 83.7 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+V +IK L+ ++RP + DGG+I F Y+DGI+ + G C+ C + TLK+ +
Sbjct: 7 DIVDKIKLELE-KIRPKLIADGGNIEFINYKDGILKIRFLGECAHCELSHITLKFAIEKN 65
Query: 176 LNHFVPEVKDIRTV 189
+ +PEV + V
Sbjct: 66 IKEKIPEVNKVIEV 79
>gi|281356627|ref|ZP_06243118.1| nitrogen-fixing NifU domain protein [Victivallis vadensis ATCC
BAA-548]
gi|281316754|gb|EFB00777.1| nitrogen-fixing NifU domain protein [Victivallis vadensis ATCC
BAA-548]
Length = 76
Score = 83.7 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ ++I E L++ +R + DGGD+ V L ++GAC GCP A+ T+K G+
Sbjct: 2 DELTKKITERLES-LRVHLQADGGDLEIVAIEGKTVKLKLQGACGGCPHAAMTIKGGLER 60
Query: 175 ILNHFV-PEVKDIRTV 189
IL + PE+ I V
Sbjct: 61 ILREEIDPEIV-IERV 75
>gi|320354901|ref|YP_004196240.1| Fe-S cluster assembly protein NifU [Desulfobulbus propionicus DSM
2032]
gi|320123403|gb|ADW18949.1| Fe-S cluster assembly protein NifU [Desulfobulbus propionicus DSM
2032]
Length = 278
Score = 83.7 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 44/99 (44%)
Query: 90 PIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI 149
++ G + + +++I+EV++ ++P + +DGGDI
Sbjct: 178 ALLAETVEGQPAQPFGATKKKRMTSLEKIKKIEEVIEREIKPTLKKDGGDIQLIDVDGDF 237
Query: 150 VFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
V +S+RG+C+ C S+ TLK V L V E +
Sbjct: 238 VTVSLRGSCANCYSSRTTLKEYVEKKLREQVLESLIVEE 276
>gi|269792680|ref|YP_003317584.1| nitrogen-fixing NifU domain-containing protein [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100315|gb|ACZ19302.1| nitrogen-fixing NifU domain protein [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 76
Score = 83.7 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR--DGIVFLSMRGACSGCPSASETLKYGVAN 174
+ ++IK++++ +RPA+ GGDI FKG+ G+V +++ GAC CP A ETL+ V
Sbjct: 1 MEEQIKKLIEEEIRPALQSHGGDIDFKGFDQASGVVTVALTGACGTCPFAQETLRVQVEQ 60
Query: 175 ILNHFVPEVKDIR 187
++ P V ++
Sbjct: 61 VIRRSFPSVTAVK 73
>gi|86743152|ref|YP_483552.1| HesB/YadR/YfhF [Frankia sp. CcI3]
gi|86570014|gb|ABD13823.1| HesB/YadR/YfhF [Frankia sp. CcI3]
Length = 206
Score = 83.7 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 8/112 (7%)
Query: 85 FISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG 144
F +P + S + +D+ + ++++E+++ +RP + DGGD
Sbjct: 95 FTFQNPNATSSCGCGTSFGASDSTERTAADARLREQVEEIMEE-IRPFLRGDGGDAEVVA 153
Query: 145 Y-----RDGI--VFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
G V L + GAC GC SA+ TL + + L +PE+ + V
Sbjct: 154 TLAGNGEPGTAEVHLRLTGACGGCSSATATLTGVIESRLKEALPEIGRVALV 205
>gi|255529963|ref|YP_003090335.1| nitrogen-fixing NifU domain-containing protein [Pedobacter
heparinus DSM 2366]
gi|255342947|gb|ACU02273.1| nitrogen-fixing NifU domain protein [Pedobacter heparinus DSM 2366]
Length = 81
Score = 83.7 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +++++ L+ +RP + DGGD+ + + +V L + G C C + T+K G+
Sbjct: 3 LTEQVEQALET-IRPYLIADGGDVAIEEITPENVVRLKLLGNCGSCKMSFMTMKAGIEQA 61
Query: 176 LNHFVPEVKDIRTV 189
+ VP++ + V
Sbjct: 62 IMKSVPQITAVEAV 75
>gi|270308880|ref|YP_003330938.1| NifU domain protein [Dehalococcoides sp. VS]
gi|270154772|gb|ACZ62610.1| NifU domain protein [Dehalococcoides sp. VS]
Length = 72
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++++++ VLD ++RPA+ DGG++ DG+V + + GAC+GCP ++ TLK G+ IL
Sbjct: 1 MLEKVEAVLD-KIRPALEADGGNVELVDVVDGVVKVKLVGACAGCPMSTMTLKNGIERIL 59
Query: 177 NHFVPEVKDIRT 188
+PEVK++
Sbjct: 60 KREIPEVKEVVA 71
>gi|315304549|ref|ZP_07874802.1| nitrogen fixation protein NifU [Listeria ivanovii FSL F6-596]
gi|313627083|gb|EFR95963.1| nitrogen fixation protein NifU [Listeria ivanovii FSL F6-596]
Length = 78
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ + L + RP + RDGGD DG V + + GAC CPS+ TLK G+ L+
Sbjct: 7 AEVDKAL-KKFRPFLVRDGGDYELVEVTPDGTVKIKLLGACETCPSSDMTLKMGIELTLS 65
Query: 178 HFVPEVKDIRTV 189
+ K++ V
Sbjct: 66 EKIIGFKEVVQV 77
>gi|119484429|ref|ZP_01619046.1| hypothetical protein L8106_01887 [Lyngbya sp. PCC 8106]
gi|119457903|gb|EAW39026.1| hypothetical protein L8106_01887 [Lyngbya sp. PCC 8106]
Length = 289
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
+ RI++ L+ VRP + GD+ + V + + G CS CP+++
Sbjct: 86 HELIKPPQPPLENRIQQALEE-VRPGLKSHSGDVELVAIKLPDTVEVKLVGTCSNCPAST 144
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TLK GV + + PE+ + +V
Sbjct: 145 LTLKQGVEQAIKNHCPEINHVISV 168
>gi|319952564|ref|YP_004163831.1| nitrogen-fixing nifu domain-containing protein [Cellulophaga
algicola DSM 14237]
gi|319421224|gb|ADV48333.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga
algicola DSM 14237]
Length = 79
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYG 171
+ + +++ L+ +RP + DGGDI + V + + GAC GC TLK G
Sbjct: 2 TSEELRLNVEKALEE-IRPFLQSDGGDISLVSIDNDTSVKVRLEGACIGCTVNQMTLKSG 60
Query: 172 VANILNHFVPEVKDI 186
V + + P+++++
Sbjct: 61 VEMTIKKYAPQIEEV 75
>gi|73749405|ref|YP_308644.1| nifU protein,-like protein [Dehalococcoides sp. CBDB1]
gi|147670014|ref|YP_001214832.1| NifU domain-containing protein [Dehalococcoides sp. BAV1]
gi|289433363|ref|YP_003463236.1| nitrogen-fixing NifU domain protein [Dehalococcoides sp. GT]
gi|73661121|emb|CAI83728.1| nifU protein, homolog [Dehalococcoides sp. CBDB1]
gi|146270962|gb|ABQ17954.1| nitrogen-fixing NifU domain protein [Dehalococcoides sp. BAV1]
gi|288947083|gb|ADC74780.1| nitrogen-fixing NifU domain protein [Dehalococcoides sp. GT]
Length = 72
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++++++ VLD ++RPA+ DGG++ DG+V + + GAC+GCP ++ TLK G+ IL
Sbjct: 1 MLEKVEAVLD-KIRPALEADGGNVELVDVVDGVVKVKLVGACAGCPMSTMTLKNGIERIL 59
Query: 177 NHFVPEVKDIRT 188
+PE+K++
Sbjct: 60 KREIPEIKEVVA 71
>gi|72537505|gb|AAZ73682.1| hypothetical protein [Lyngbya majuscula CCAP 1446/4]
Length = 289
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVAN 174
+ RI++ L+ VRP + GD+ + V + + G CS CP+++ TLK GV
Sbjct: 95 PLETRIQQALEE-VRPGLKSHSGDVELVAVKLPDTVEVKLVGTCSNCPASTLTLKQGVEQ 153
Query: 175 ILNHFVPEVKDIRTV 189
+ + PE++ + +V
Sbjct: 154 AIKNHCPEIQHVISV 168
>gi|157165751|ref|YP_001467687.1| hypothetical protein CCC13826_1742 [Campylobacter concisus 13826]
gi|112800805|gb|EAT98149.1| NifU family protein [Campylobacter concisus 13826]
Length = 91
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD +++ + L +V P + DGG + G ++G +++ + G C GC +++ TL
Sbjct: 1 MIPFSDEELLKPVTASLQ-KVLPMLENDGGGMELLGIKNGKIYVRLTGHCHGCAASTTTL 59
Query: 169 KYGVANILNHFV-PEVKDIRTV 189
KYG+ L + PE+ ++ V
Sbjct: 60 KYGIERQLRIDIHPEL-EVINV 80
>gi|218780491|ref|YP_002431809.1| Fe-S cluster assembly protein NifU [Desulfatibacillum alkenivorans
AK-01]
gi|218761875|gb|ACL04341.1| Fe-S cluster assembly protein NifU [Desulfatibacillum alkenivorans
AK-01]
Length = 271
Score = 83.3 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q I+E L+ VRP + +DGGDI V + ++G CS C ++ TLK V L
Sbjct: 200 IQLIQETLEREVRPTLKQDGGDIELVDVDGDKVLVRLQGRCSSCQASQATLKGHVEAKLR 259
Query: 178 HFVPEVKDIRTV 189
V + + V
Sbjct: 260 ELVVDTLVVEEV 271
>gi|289435662|ref|YP_003465534.1| NifU family protein [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289171906|emb|CBH28452.1| NifU family protein [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|313632102|gb|EFR99193.1| nitrogen fixation protein NifU [Listeria seeligeri FSL N1-067]
gi|313636487|gb|EFS02228.1| nitrogen fixation protein NifU [Listeria seeligeri FSL S4-171]
Length = 78
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ + L + RP + RDGGD DG V + + GAC CPS+ TLK G+ L
Sbjct: 7 AEVDKAL-KKFRPFLVRDGGDYELVEVTPDGTVKIKLLGACETCPSSDMTLKMGIELTLA 65
Query: 178 HFVPEVKDIRTV 189
+ K++ V
Sbjct: 66 EKIIGFKEVVQV 77
>gi|327400610|ref|YP_004341449.1| nitrogen-fixing NifU domain-containing protein [Archaeoglobus
veneficus SNP6]
gi|327316118|gb|AEA46734.1| nitrogen-fixing NifU domain-containing protein [Archaeoglobus
veneficus SNP6]
Length = 79
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 129 VRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+RPA+ +DGG+I + G+V + + GAC GCP + TL V + VPEVK +
Sbjct: 17 IRPALIQDGGNIAVVDVDEESGVVKVQLLGACYGCPLSQVTLAMFVEQRIKQRVPEVKKV 76
Query: 187 RTV 189
V
Sbjct: 77 IPV 79
>gi|160915579|ref|ZP_02077790.1| hypothetical protein EUBDOL_01587 [Eubacterium dolichum DSM 3991]
gi|158432699|gb|EDP10988.1| hypothetical protein EUBDOL_01587 [Eubacterium dolichum DSM 3991]
Length = 76
Score = 83.3 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ IK V+ N++RP + RDGGD+ F + +GIV + + GAC GC S ET+ G+ IL
Sbjct: 5 IEEIKHVI-NKIRPYIQRDGGDVEFVSFDNGIVAVRLLGACIGCASVDETISGGIEAILL 63
Query: 178 HFVPEVKDIRTV 189
V V + V
Sbjct: 64 DEVAGVSKVILV 75
>gi|217979852|ref|YP_002363999.1| Rieske (2Fe-2S) domain protein [Methylocella silvestris BL2]
gi|217505228|gb|ACK52637.1| Rieske (2Fe-2S) domain protein [Methylocella silvestris BL2]
Length = 290
Score = 82.9 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ +RI+ L+ VRP +A GGD+ R + + G+C GCP++S T GV +
Sbjct: 94 LSERIESALEG-VRPMLAAHGGDVELVSVRPPAIEVRFVGSCDGCPASSMTFHAGVKKAV 152
Query: 177 NHFVPEVKDIRTV 189
PE+ DI V
Sbjct: 153 AEACPEITDILQV 165
>gi|116873760|ref|YP_850541.1| NifU family protein [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116742638|emb|CAK21762.1| NifU family protein [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 78
Score = 82.9 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ + L + RP + RDGGD DGIV + + GAC CPS+ TLK G+ L
Sbjct: 8 EVDKAL-KKFRPFLVRDGGDYELIEVTPDGIVKIKLLGACETCPSSDMTLKMGIELTLAE 66
Query: 179 FVPEVKDIRTV 189
+ K++ V
Sbjct: 67 KIIGFKEVVQV 77
>gi|167747967|ref|ZP_02420094.1| hypothetical protein ANACAC_02699 [Anaerostipes caccae DSM 14662]
gi|167652617|gb|EDR96746.1| hypothetical protein ANACAC_02699 [Anaerostipes caccae DSM 14662]
Length = 116
Score = 82.9 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 45/73 (61%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+++ I++VL+ VRP + G++ Y++GI+ + + G C GCPSA+ T + +A +
Sbjct: 18 MLREIEKVLEEDVRPYLLEHEGNVRISEYKEGILKVRLTGQCCGCPSAALTTEELIAEAV 77
Query: 177 NHFVPEVKDIRTV 189
+PEVKD+ V
Sbjct: 78 KKKIPEVKDVVLV 90
>gi|289209036|ref|YP_003461102.1| nitrogen-fixing NifU domain protein [Thioalkalivibrio sp. K90mix]
gi|288944667|gb|ADC72366.1| nitrogen-fixing NifU domain protein [Thioalkalivibrio sp. K90mix]
Length = 299
Score = 82.9 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLS 153
+ + D+ + I+ D+ ++ ++ R + +DGGDI F V +
Sbjct: 209 AQTFAEREAADVPADGPIDEDA-----VRAAIEE-ARRILMQDGGDIEFVELDGRTVRVR 262
Query: 154 MRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
++GAC GCP ++ LK V ++ P V +
Sbjct: 263 LKGACVGCPRSTLDLKNVVERLVRSRAPGVASV 295
>gi|256823357|ref|YP_003147320.1| IscR-regulated protein YhgI [Kangiella koreensis DSM 16069]
gi|256796896|gb|ACV27552.1| IscR-regulated protein YhgI [Kangiella koreensis DSM 16069]
Length = 192
Score = 82.9 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 64/182 (35%), Gaps = 16/182 (8%)
Query: 21 VVLVEGAIHFSNAKEAEISP-LASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPP-V 77
+ HF + P R+F + PG + G + + L+
Sbjct: 3 TISEAAQEHFRRLLAGQEEPDTGIRVFVVNPGTSHAECGVSYCPPDAIEDTDTELKFDGF 62
Query: 78 LGMIMEHFISGDPIIHNGGLGDMKLDDMG---------SGDFIESDSAVVQRIKEVLDNR 128
I E P + + K G ++ D+ RI+ L++
Sbjct: 63 SAFIDE---DSAPYLDEAEIDYSKEQTGGQLTLKAPNAKARKVDDDAPATDRIRYYLESE 119
Query: 129 VRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
+ P +A GG + + + GI L G C GC TLK G+ L VPEVK ++
Sbjct: 120 INPELANHGGQVSLVEFTQSGIAVLQFGGGCQGCGMVDVTLKEGIEKTLIERVPEVKGVK 179
Query: 188 TV 189
V
Sbjct: 180 DV 181
>gi|145350853|ref|XP_001419810.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580042|gb|ABO98103.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 73
Score = 82.9 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++ + E LD VRP + DGG++ I+ + + GAC C S+S T+K G+ +L
Sbjct: 1 TMENVDEALDE-VRPYLVADGGNVELVKIEGKIIVVRLNGACGTCASSSATMKGGIEKLL 59
Query: 177 NHFVPE-VKDIRTV 189
+ V+++ V
Sbjct: 60 KQKFGDAVEEVVDV 73
>gi|327402917|ref|YP_004343755.1| nitrogen-fixing NifU domain-containing protein [Fluviicola
taffensis DSM 16823]
gi|327318425|gb|AEA42917.1| nitrogen-fixing NifU domain-containing protein [Fluviicola
taffensis DSM 16823]
Length = 81
Score = 82.9 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYG 171
+ + + +I L N +RP + DGGD+ +GIV + + GACS C + T+K G
Sbjct: 4 NKTELTDKINLSL-NELRPHLVADGGDMELVDITDEGIVQVRLLGACSDCSMSMMTIKAG 62
Query: 172 VANILNHFVPEVKDIRTV 189
+ + PE+ + V
Sbjct: 63 LEEAVKRVAPEIIAVEAV 80
>gi|295132384|ref|YP_003583060.1| NifU-like/thioredoxin-like protein [Zunongwangia profunda SM-A87]
gi|294980399|gb|ADF50864.1| NifU-like/thioredoxin-like protein [Zunongwangia profunda SM-A87]
Length = 80
Score = 82.9 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYG 171
+ + +++ L +RP + DGGDI D +V + + GAC GC TLK G
Sbjct: 2 TSEEIKLNVEKALAE-IRPFLESDGGDISLVAIEDDRLVKVQLEGACVGCSVNQMTLKSG 60
Query: 172 VANILNHFVPEVKDIRTV 189
V + +VP+++++ +
Sbjct: 61 VEMTIKKYVPQIEEVINI 78
>gi|329945551|ref|ZP_08293288.1| NifU-like protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328528731|gb|EGF55683.1| NifU-like protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 170
Score = 82.9 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 18/184 (9%)
Query: 7 DTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASV-YFGYDFITVGK 65
TP+P L++ V+ +G + F + A+ + + SV G +T+
Sbjct: 2 TTPDPDVLRW-----VVPDGLLPF-TGEVAQAPATLQALIDDGTLRSVRVDGGAVLTLLG 55
Query: 66 DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVL 125
+ W V ++E G P GG + D A+ +++
Sbjct: 56 SGHSWRAEGARVRSALVEAL--GAPKAWKGG---------ETAQVSGPDDALEAAARQIA 104
Query: 126 DNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
+ V GG +V + RDG+V ++M GAC CP+A T+ ++L P + +
Sbjct: 105 GGSLGSFVNSHGGALVVRSVRDGVVEVAMEGACDECPAAEITMHARFEHLLRRRCPWLVE 164
Query: 186 IRTV 189
+R +
Sbjct: 165 VRRI 168
>gi|283851976|ref|ZP_06369252.1| Fe-S cluster assembly protein NifU [Desulfovibrio sp. FW1012B]
gi|283572700|gb|EFC20684.1| Fe-S cluster assembly protein NifU [Desulfovibrio sp. FW1012B]
Length = 283
Score = 82.9 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ ++ + +V++ +RP + +DGGDI V +S+RGAC GCP ++ TL V
Sbjct: 205 TNLERMKLVTKVMEEEIRPNLKKDGGDIELVDIDGHTVVVSLRGACKGCPKSNLTLTEFV 264
Query: 173 ANILNHFV-PEV 183
N L V PE+
Sbjct: 265 QNRLRELVEPEI 276
>gi|257059152|ref|YP_003137040.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 8802]
gi|256589318|gb|ACV00205.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 8802]
Length = 289
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
+ +RI++ L+ VRP + GD+ + V + + G CS CP+++
Sbjct: 85 HQLIKPPTPTLEERIQQALET-VRPGLKSHHGDVELVAIKFPDTVEVRLIGTCSNCPAST 143
Query: 166 ETLKYGVANILNHFVPEVKD 185
T+K GV + + PE+
Sbjct: 144 LTMKQGVEQAIKTYCPEITQ 163
>gi|148252075|ref|YP_001236660.1| putative nitrogen-fixing NifU, Rieske (2Fe-2S) region
[Bradyrhizobium sp. BTAi1]
gi|146404248|gb|ABQ32754.1| putative nitrogen-fixing NifU , Rieske (2Fe-2S) region
[Bradyrhizobium sp. BTAi1]
Length = 289
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Query: 71 EHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA-VVQRIKEVLDNRV 129
E L+ ++ S + + + +R++ LD+ V
Sbjct: 47 EDLQGEAFRRLVRALKSDSAALTAMKQAVSDEIVYAVLRRHDILKPSLSERLETALDS-V 105
Query: 130 RPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
RP +A GGD+ R + + GAC GCP+++ T GV + PE+ DI V
Sbjct: 106 RPILASHGGDVELIAVRPPAIEVRFTGACDGCPASALTFHAGVKKAVEEACPEITDILQV 165
>gi|329769819|ref|ZP_08261220.1| hypothetical protein HMPREF0433_00984 [Gemella sanguinis M325]
gi|328838181|gb|EGF87799.1| hypothetical protein HMPREF0433_00984 [Gemella sanguinis M325]
Length = 84
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +IK L+ ++RP + DGGDI F ++DGI+ L +G C+ C + T+K+ +
Sbjct: 7 ETISKIKIELE-KIRPKLIMDGGDIEFVNFKDGILKLRFKGECAHCELSHITMKFAIEKN 65
Query: 176 LNHFVPEVKDIRTV 189
+ +PEVK + V
Sbjct: 66 ILEKIPEVKKVTEV 79
>gi|218246101|ref|YP_002371472.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
8801]
gi|218166579|gb|ACK65316.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 8801]
Length = 289
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSAS 165
+ +RI++ L+ VRP + GD+ + V + + G CS CP+++
Sbjct: 85 HQLIKPPTPTLEERIQQALET-VRPGLKSHHGDVELVAIKFPDTVEVRLIGTCSNCPAST 143
Query: 166 ETLKYGVANILNHFVPEVKD 185
T+K GV + + PE+
Sbjct: 144 LTMKQGVEQAIKTYCPEITQ 163
>gi|313897537|ref|ZP_07831079.1| NifU-like protein [Clostridium sp. HGF2]
gi|312957489|gb|EFR39115.1| NifU-like protein [Clostridium sp. HGF2]
Length = 76
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ IK+ ++ ++RP + RDGGD+ F + DGIV + + GAC GC S +T++ G+ IL
Sbjct: 5 IDEIKQTIE-KIRPYIQRDGGDVEFVSFEDGIVGVRLLGACVGCMSIDDTIQGGIEAILL 63
Query: 178 HFVPEVKDI 186
V V +
Sbjct: 64 DEVEGVSGV 72
>gi|1171712|sp|Q00241|NIFU_PLEBO RecName: Full=Nitrogen fixation protein nifU
gi|441182|dbj|BAA00567.1| NifU protein [Leptolyngbya boryana IAM M-101]
gi|228686|prf||1808318C nifU gene
Length = 205
Score = 82.5 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Query: 91 IIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG 148
I ++ + ++ + I++VLD VRP + DGGD+
Sbjct: 105 IDEKETTAARIAAEISEAQIRKPLTNVQKIALIQKVLDEEVRPVLIADGGDVELYDVDGD 164
Query: 149 IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
V ++++GAC C S++ TLK V L V ++ V
Sbjct: 165 FVKVTLKGACGSCASSTATLKDAVEAKLRLRVLPTLVVQAV 205
>gi|98152888|ref|YP_611137.1| nitrogen-fixing NifU-like [Sphingopyxis alaskensis RB2256]
gi|95105285|gb|ABF54908.1| nitrogen-fixing NifU-like [Sphingopyxis alaskensis RB2256]
Length = 311
Score = 82.5 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+++ +R+ L VRP +A GGD + GAC GCP+++ T GV
Sbjct: 114 ASLFERVDAALAT-VRPTLAGHGGDAELVEVSGDKAVVRFLGACDGCPASALTFYAGVKK 172
Query: 175 ILNHFVPEVKDIRT 188
+ VPE+++++
Sbjct: 173 AITEQVPEIREVKQ 186
>gi|86606476|ref|YP_475239.1| Fe-S cluster assembly protein NifU [Synechococcus sp. JA-3-3Ab]
gi|86555018|gb|ABC99976.1| Fe-S cluster assembly protein NifU [Synechococcus sp. JA-3-3Ab]
Length = 312
Score = 82.1 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 14/119 (11%)
Query: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV--------------VQRI 121
+ +I D + + S V + RI
Sbjct: 185 QIEDLIAAVLAETDATPSEDSRNSKGNSQNQTEPSPAAPSPVSATATPPPLTTLQKIARI 244
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+ VL+ VRP + DGGD+ V++ ++G+C+ CPS TL+ + L V
Sbjct: 245 QAVLEEEVRPLLLADGGDVELYDLEGDQVWVRLKGSCTTCPSQQNTLRLLIETRLQEQV 303
>gi|119486794|ref|ZP_01620769.1| Fe-S cluster assembly protein NifU [Lyngbya sp. PCC 8106]
gi|119456087|gb|EAW37220.1| Fe-S cluster assembly protein NifU [Lyngbya sp. PCC 8106]
Length = 300
Score = 82.1 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I++VL +++P +A+DGG++ V + ++GACS C S++ETLK + L V
Sbjct: 232 IQQVLTEQIKPVLAKDGGNVELFDVEGDRVKVILQGACSSCASSTETLKIAIEGTLRATV 291
Query: 181 -PEVKDIRTV 189
P++ + V
Sbjct: 292 SPDLI-VEAV 300
>gi|329767228|ref|ZP_08258755.1| hypothetical protein HMPREF0428_00452 [Gemella haemolysans M341]
gi|328836895|gb|EGF86542.1| hypothetical protein HMPREF0428_00452 [Gemella haemolysans M341]
Length = 84
Score = 82.1 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
V +IK L+ ++RP + +DGG+I F +++GI+ + G C+ C + TLKY +
Sbjct: 7 ETVDKIKFELE-KIRPKLIKDGGNIEFINFKNGILKIRFLGECAHCELSHITLKYAIEKT 65
Query: 176 LNHFVPEVKDIRTV 189
+ +PEV + V
Sbjct: 66 IVEKIPEVNKVIEV 79
>gi|11498240|ref|NP_069466.1| nifU protein (nifU-3) [Archaeoglobus fulgidus DSM 4304]
gi|2649997|gb|AAB90617.1| nifU protein (nifU-3) [Archaeoglobus fulgidus DSM 4304]
Length = 77
Score = 81.8 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG--IVFLSMRGACSGCPSASETLKYGVAN 174
+ ++++EV++ +RPA+ RDGG+I +G V + + GAC GCP + TL V
Sbjct: 3 LREKVEEVVEKDIRPALMRDGGNIAVVDVDEGSGTVKVQLLGACGGCPMSMITLTSFVER 62
Query: 175 ILN 177
L
Sbjct: 63 YLR 65
>gi|221194695|ref|ZP_03567752.1| conserved domain protein [Atopobium rimae ATCC 49626]
gi|221185599|gb|EEE17989.1| conserved domain protein [Atopobium rimae ATCC 49626]
Length = 78
Score = 81.8 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN 174
A+ + + + +R ++ DGGD+ DG V L M G+C+GCP ++ + G+
Sbjct: 2 AINRELLNATLDVIRQSLQADGGDVELIDVNDDGTVTLEMTGSCAGCPLSAYDMSEGIER 61
Query: 175 ILNHFVPEVKDIRT 188
IL VP VK ++
Sbjct: 62 ILVEHVPGVKRVQP 75
>gi|297568819|ref|YP_003690163.1| Fe-S cluster assembly protein NifU [Desulfurivibrio alkaliphilus
AHT2]
gi|296924734|gb|ADH85544.1| Fe-S cluster assembly protein NifU [Desulfurivibrio alkaliphilus
AHT2]
Length = 277
Score = 81.8 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 98 GDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGA 157
+ K + ++ ++ I+E+ + +RPA+ +DGGDI V +++RGA
Sbjct: 185 QESKAEPAAEPAKKLTNIQKIKMIEELFEREIRPALRKDGGDIELVDLDGDFVTVALRGA 244
Query: 158 CSGCPSASETLKYGVANILNHFV 180
C C + TLK V L V
Sbjct: 245 CVTCKKSKLTLKEYVEKKLREQV 267
>gi|332668404|ref|YP_004451192.1| nitrogen-fixing NifU domain-containing protein [Haliscomenobacter
hydrossis DSM 1100]
gi|332337218|gb|AEE54319.1| nitrogen-fixing NifU domain-containing protein [Haliscomenobacter
hydrossis DSM 1100]
Length = 84
Score = 81.8 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLK 169
+E+ S ++ RI L N VRP +A DGG++ + +V + G C C + T++
Sbjct: 1 METKSELISRIDLAL-NEVRPHLAVDGGNVEVVDVTDEKVVKIKWLGNCQNCNMSIMTMR 59
Query: 170 YGVANILNHFVPEVKDIRTV 189
G+ + VPE+ + V
Sbjct: 60 AGIEQAIRVKVPEITGVEAV 79
>gi|108805648|ref|YP_645585.1| nitrogen-fixing NifU-like protein [Rubrobacter xylanophilus DSM
9941]
gi|108766891|gb|ABG05773.1| nitrogen-fixing NifU-like protein [Rubrobacter xylanophilus DSM
9941]
Length = 80
Score = 81.8 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETL 168
+E+ + R++ L +VRPA+ DGGD + G V + M GACSGCP +
Sbjct: 1 MEAKPDMRSRVEAAL-GKVRPAMQADGGDARVVDCDEETGSVKIQMLGACSGCPLSQLDF 59
Query: 169 KYGVANILNHFVPEVKDIRTV 189
Y + +++ VPEV++I V
Sbjct: 60 VYAIESLIRREVPEVREILAV 80
>gi|254421266|ref|ZP_05034984.1| Fe-S cluster assembly protein NifU [Synechococcus sp. PCC 7335]
gi|196188755|gb|EDX83719.1| Fe-S cluster assembly protein NifU [Synechococcus sp. PCC 7335]
Length = 294
Score = 81.8 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ I++V+ VRP + DGGDI +V + + GAC GC S+SETLK + L
Sbjct: 223 INLIQQVIAEDVRPILLADGGDIELYDVDGDVVRVLLTGACGGCASSSETLKNSIETSLQ 282
Query: 178 HFV 180
V
Sbjct: 283 AKV 285
>gi|257784797|ref|YP_003180014.1| nitrogen-fixing NifU domain-containing protein [Atopobium parvulum
DSM 20469]
gi|257473304|gb|ACV51423.1| nitrogen-fixing NifU domain protein [Atopobium parvulum DSM 20469]
Length = 78
Score = 81.4 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 129 VRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
+R ++ DGGD+ DG V L M G+C+GCP ++ + G+ IL VP VK ++
Sbjct: 15 IRQSLQTDGGDVELIDVSDDGTVTLEMVGSCAGCPMSAYDMSEGIERILIEHVPGVKRVQ 74
Query: 188 T 188
Sbjct: 75 P 75
>gi|226363961|ref|YP_002781743.1| hypothetical protein ROP_45510 [Rhodococcus opacus B4]
gi|226242450|dbj|BAH52798.1| hypothetical protein [Rhodococcus opacus B4]
Length = 278
Score = 81.4 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
V R+ LD+ VRP + GGD+ G DG+V L + G+C CPS++ TL+ V +
Sbjct: 58 DVETRVATALDS-VRPYLGSHGGDVELLGVVDGVVRLRLTGSCKSCPSSAVTLELAVKDA 116
Query: 176 LNHFVPEVKDIRTV 189
+ PE DI V
Sbjct: 117 VLAAAPETVDIEVV 130
>gi|302342126|ref|YP_003806655.1| Fe-S cluster assembly protein NifU [Desulfarculus baarsii DSM 2075]
gi|301638739|gb|ADK84061.1| Fe-S cluster assembly protein NifU [Desulfarculus baarsii DSM 2075]
Length = 285
Score = 81.4 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 42/97 (43%)
Query: 93 HNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFL 152
++ ++ ++ ++E L+ VRPA+ +DGGDI V +
Sbjct: 187 SGALAAKVQAPPQAEPKKKLTNIQKMRLVEETLEREVRPALKQDGGDIELIDIDGDKVLV 246
Query: 153 SMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
S+RG CS C ++ TL V L FV + + V
Sbjct: 247 SLRGMCSSCAASQATLSQFVQAKLREFVTDELVVEEV 283
>gi|260460215|ref|ZP_05808467.1| Rieske (2Fe-2S) domain protein [Mesorhizobium opportunistum
WSM2075]
gi|259033860|gb|EEW35119.1| Rieske (2Fe-2S) domain protein [Mesorhizobium opportunistum
WSM2075]
Length = 290
Score = 81.4 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ +R++ LD VRP +A GG++ R + + GAC GCP+++ T GV +
Sbjct: 94 LSERVEAALDG-VRPMLASHGGNVELVNVRPPAIEVRFVGACDGCPASALTFHAGVKKAI 152
Query: 177 NHFVPEVKDIRTV 189
PE+ DI +
Sbjct: 153 EEACPEITDIVQI 165
>gi|296171555|ref|ZP_06852819.1| Rieske family iron-sulfur cluster-binding protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295894117|gb|EFG73878.1| Rieske family iron-sulfur cluster-binding protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 305
Score = 81.4 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ +R+ + LD RVRP + GGD+ DG+V L+ G+C CPS++ TL+ V +
Sbjct: 101 DLHRRVSDALD-RVRPYLGSHGGDVDLLEITDDGVVRLAFAGSCKSCPSSAVTLELAVQD 159
Query: 175 ILNHFVPEVKDIRTV 189
+ PEV I V
Sbjct: 160 AVCAAAPEVSSIEAV 174
>gi|86607917|ref|YP_476679.1| Fe-S cluster assembly protein NifU [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556459|gb|ABD01416.1| Fe-S cluster assembly protein NifU [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 312
Score = 81.4 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ RI+ VL+ VRP + DGGD+ V++ ++G+C+ CPS TL+ + L
Sbjct: 241 IARIQAVLEEEVRPLLLADGGDVELYDLEGDQVWVRLKGSCTTCPSQQNTLRLLIETRLQ 300
Query: 178 HFV 180
V
Sbjct: 301 EQV 303
>gi|110004115|emb|CAK98454.1| hypothetical nitrogen fixation protein [Spiroplasma citri]
Length = 75
Score = 81.4 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ K+++DN +RP + +DGGDI F ++ IV++ + GAC GC T+K GV I+
Sbjct: 4 TNQAKDIIDN-LRPYINQDGGDIEFVEVKNNIVYVRLAGACVGCGLIDSTIKDGVEQIVK 62
Query: 178 HFVPEVKDIRTV 189
+P++ + +
Sbjct: 63 QEMPDIIAVEVI 74
>gi|308160832|gb|EFO63302.1| Hypothetical protein GLP15_1091 [Giardia lamblia P15]
Length = 197
Score = 81.0 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Query: 36 AEISPLASRIFSIPGIASVYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHN 94
E L S + + G+ + +TV + Q W +R + + F P N
Sbjct: 40 PEAPSLQSDLMKVKGVKKLSISPTGVTVTVRSQGIWPSVRSAIEDKVYAAFDPNTPHTPN 99
Query: 95 GGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNR-VRPAVARDGGDIVFKG---YRDG-I 149
++ + + +G + ++ +++ E+L + P +ARDGG ++ G +
Sbjct: 100 ELRLAIQ-EILNTGSRVPNN---IRKASELLIKAAINPFLARDGGSCSYERHELTDKGLV 155
Query: 150 VFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
V++ + G CSGC ++ T+ V + ++P++ ++
Sbjct: 156 VYIKLHGNCSGCSKSTTTMNTFVISEFKRYIPDIHTVK 193
>gi|94270459|ref|ZP_01291748.1| Fe-S cluster assembly protein NifU [delta proteobacterium MLMS-1]
gi|93450788|gb|EAT01836.1| Fe-S cluster assembly protein NifU [delta proteobacterium MLMS-1]
Length = 277
Score = 81.0 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ I++VL+ ++PA+ +DGGDI V +S+RGAC+ C + T+K V L
Sbjct: 205 IKMIEDVLEREIKPALRKDGGDIELVDLDGDFVTVSLRGACASCKKSQTTIKDYVEKKLR 264
Query: 178 HFV 180
V
Sbjct: 265 EQV 267
>gi|94267278|ref|ZP_01290831.1| Fe-S cluster assembly protein NifU [delta proteobacterium MLMS-1]
gi|93452070|gb|EAT02758.1| Fe-S cluster assembly protein NifU [delta proteobacterium MLMS-1]
Length = 277
Score = 81.0 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ I++VL+ ++PA+ +DGGDI V +S+RGAC+ C + T+K V L
Sbjct: 205 IKMIEDVLEREIKPALRKDGGDIELVDLDGDFVTVSLRGACASCKKSQTTIKDYVEKKLR 264
Query: 178 HFV 180
V
Sbjct: 265 EQV 267
>gi|303327402|ref|ZP_07357843.1| Fe-S cluster assembly protein NifU [Desulfovibrio sp. 3_1_syn3]
gi|302862342|gb|EFL85275.1| Fe-S cluster assembly protein NifU [Desulfovibrio sp. 3_1_syn3]
Length = 278
Score = 81.0 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ +Q++ + +D +RP +A DGGDI V +S+RG CS C S+ T++ V
Sbjct: 202 TNVQRMQQVLKTIDEEIRPQLAADGGDIELVDVDGKRVTVSLRGRCSHCRSSEVTIRNLV 261
Query: 173 ANILNHFV-PEV 183
+L V P++
Sbjct: 262 ERLLREHVEPDI 273
>gi|296272309|ref|YP_003654940.1| nitrogen-fixing NifU domain-containing protein [Arcobacter
nitrofigilis DSM 7299]
gi|296096483|gb|ADG92433.1| nitrogen-fixing NifU domain protein [Arcobacter nitrofigilis DSM
7299]
Length = 92
Score = 81.0 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD + +K ++DN++ P +A+DGG + ++G VF+ + GAC GC ++ TL
Sbjct: 1 MMPFSDEDLFPVVKNIIDNKIAPMLAQDGGAMTLLDVKNGKVFVQLNGACVGCSASGSTL 60
Query: 169 KYGVANILNHFV-PE--VKDIR 187
KY V L + PE + ++
Sbjct: 61 KYVVEKELKAAIHPELIIINVE 82
>gi|255030011|ref|ZP_05301962.1| hypothetical protein LmonL_14764 [Listeria monocytogenes LO28]
Length = 61
Score = 81.0 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 131 PAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
P + RDGGD +DGIV + + GAC CPS+ TLK G+ L + K++ V
Sbjct: 1 PFLVRDGGDYELIEVTQDGIVKIKLLGACETCPSSDMTLKMGIELTLAEKIIGFKEVVQV 60
>gi|239624672|ref|ZP_04667703.1| predicted protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521058|gb|EEQ60924.1| predicted protein [Clostridiales bacterium 1_7_47FAA]
Length = 96
Score = 81.0 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGV 172
+ + + I+ VL+ VRP ++ GG + +GI+++ M+G C+GCPSA ET+K V
Sbjct: 2 NEELRKDIEAVLNLFVRPQLSSHGGGLEVVDLDENGILWIEMQGGCAGCPSADETVKNLV 61
Query: 173 ANILNHFVPEVKDIR 187
L +P++K +
Sbjct: 62 QKELVTRIPQIKGVE 76
>gi|111021577|ref|YP_704549.1| nitrogen fixation protein [Rhodococcus jostii RHA1]
gi|110821107|gb|ABG96391.1| possible nitrogen fixation protein [Rhodococcus jostii RHA1]
Length = 318
Score = 81.0 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
V R+ LD+ VRP + GGD+ G +G+V L + G+C CPS++ TL+ V +
Sbjct: 98 DVETRVATALDS-VRPYLGSHGGDVELLGVVEGVVRLRLTGSCQSCPSSAVTLELAVKDA 156
Query: 176 LNHFVPEVKDIRTV 189
+ PE DI V
Sbjct: 157 VLAAAPETVDIEVV 170
>gi|33520016|ref|NP_878848.1| hypothetical protein Bfl573 [Candidatus Blochmannia floridanus]
gi|51701996|sp|Q7VRN1|NFUA_BLOFL RecName: Full=Fe/S biogenesis protein nfuA
gi|33504362|emb|CAD83255.1| Thioredoxin-like proteins and domains [Candidatus Blochmannia
floridanus]
Length = 205
Score = 80.6 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +IK +L +++ P +A GG + D I L G C+GC A T+K G+
Sbjct: 120 LENQIKHILTHQINPQLAMHGGSVSLVKITSDSIAILKFHGGCNGCAMAFYTIKEGIEKT 179
Query: 176 LNHFVPEVKDIRT 188
L PE+ +
Sbjct: 180 LKKLCPELNGVID 192
>gi|289549172|ref|YP_003474160.1| nitrogen-fixing NifU domain protein [Thermocrinis albus DSM 14484]
gi|289182789|gb|ADC90033.1| nitrogen-fixing NifU domain protein [Thermocrinis albus DSM 14484]
Length = 268
Score = 80.6 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 128 RVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
V+P + GGD+ +D V +S++GAC GC + TL+ + + +VP +K I
Sbjct: 98 MVKPYIQSHGGDVELVDVKDDTVIVSLKGACVGCAQSVFTLRQTILEAIQAYVPTIKRIV 157
Query: 188 TV 189
V
Sbjct: 158 EV 159
>gi|288931963|ref|YP_003436023.1| nitrogen-fixing NifU domain protein [Ferroglobus placidus DSM
10642]
gi|288894211|gb|ADC65748.1| nitrogen-fixing NifU domain protein [Ferroglobus placidus DSM
10642]
Length = 77
Score = 80.6 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 130 RPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
RPA+ RDGG+I + G V + + G+C GCP + TL V L VPEVK +
Sbjct: 16 RPALIRDGGNIAVVDVDEESGEVKVKLLGSCYGCPMSQITLTMFVEQHLKSRVPEVKKVT 75
Query: 188 TV 189
V
Sbjct: 76 PV 77
>gi|111226134|ref|YP_716928.1| hypothetical protein FRAAL6802 [Frankia alni ACN14a]
gi|111153666|emb|CAJ65425.1| Hypothetical protein in nifB-nifU intergenic region (ORF2) [Frankia
alni ACN14a]
Length = 192
Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 85 FISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG 144
F +P + + +D+ + ++++E+++ +RP + DGGD
Sbjct: 81 FTFANPNAKSSCGCGSSFGSSDDPERTAADAKLREQVEEIMEE-IRPMLRGDGGDAEVVA 139
Query: 145 YRDG-------IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
G V L + GAC GC SA+ TL + L +PE+ + V
Sbjct: 140 VLAGGGQPGSAEVHLRLTGACGGCSSANATLTGVIEARLRQELPEIGRVALV 191
>gi|308273500|emb|CBX30102.1| Nitrogen fixation protein nifU [uncultured Desulfobacterium sp.]
Length = 275
Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ ++ I+E ++ ++PA+ +DGG+I V + +RG C+ C + TLK+ V
Sbjct: 198 TNIQKIKLIEETMEREIKPALKKDGGNIELIDVDGNTVIVELRGTCASCSKSQITLKHYV 257
Query: 173 ANILNHFV-PEVKDIRTV 189
+ L V P++ + V
Sbjct: 258 ESKLRELVSPDLI-VEEV 274
>gi|301058680|ref|ZP_07199681.1| Fe-S cluster assembly protein NifU [delta proteobacterium NaphS2]
gi|300447244|gb|EFK11008.1| Fe-S cluster assembly protein NifU [delta proteobacterium NaphS2]
Length = 274
Score = 80.2 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 95 GGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSM 154
+ ++ ++ S+ +++I+E + N + P++ +DGG++ V + M
Sbjct: 178 EIIQKVRGEEKAPAPPKMSNMQKIKKIEETIANEISPSLKQDGGNVELVDVVGNRVLVKM 237
Query: 155 RGACSGCPSASETLKYGVANILNHFV-PEVKDIRTV 189
+G+C+ C ++ +TLK V L V P++ + V
Sbjct: 238 QGSCAVCKASQQTLKNFVEAKLREMVWPDLV-VEEV 272
>gi|167041225|gb|ABZ05982.1| putative NifU-like domain protein [uncultured marine microorganism
HF4000_001N02]
Length = 79
Score = 80.2 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 124 VLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEV 183
++ + V P VA GG + G DG ++ G C GC TLK GV ++ VP +
Sbjct: 3 IIASEVNPVVASHGGHVDLIGVDDGKAIIAFGGGCQGCGMVDVTLKQGVEVMIKDSVPGI 62
Query: 184 KDIRT 188
++
Sbjct: 63 SEVVD 67
>gi|120403360|ref|YP_953189.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium
vanbaalenii PYR-1]
gi|119956178|gb|ABM13183.1| Rieske (2Fe-2S) domain protein [Mycobacterium vanbaalenii PYR-1]
Length = 285
Score = 80.2 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 128 RVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
VRP + GGD+ D + F+ + GAC+GC AS TL+ V L VP ++ +
Sbjct: 101 AVRPQLHSHGGDVTLVRVDDRVAFVRLEGACNGCSMASVTLRELVEAALLQGVPNLEAVE 160
Query: 188 TV 189
V
Sbjct: 161 VV 162
>gi|126663010|ref|ZP_01734008.1| hypothetical protein FBBAL38_06650 [Flavobacteria bacterium BAL38]
gi|126624668|gb|EAZ95358.1| hypothetical protein FBBAL38_06650 [Flavobacteria bacterium BAL38]
Length = 79
Score = 80.2 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ + +++ L N +RP + DGGDI D V + + GAC+ C + T+K GV
Sbjct: 5 EIKENVEKAL-NEIRPFLNSDGGDITLVEIIDDKHVKVRLEGACTNCSLSISTMKAGVET 63
Query: 175 ILNHFVPEVKDIRTV 189
+ FVP+++ + +
Sbjct: 64 TIKKFVPQIETVENI 78
>gi|111608856|gb|ABH10986.1| Fe-S cluster assembly protein NifU [Polytomella parva]
Length = 168
Score = 80.2 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
D ++ + + LD +RP + DGGD+ ++G VFL +G+CS C S +T+K G+
Sbjct: 30 DVLSIENVNKSLD-YIRPVLMNDGGDVEIVKIQNGKVFLRFQGSCSTCTSQEDTMKGGIE 88
Query: 174 NILNHFVPE-VKDIRTV 189
L E +K+I V
Sbjct: 89 TTLRSSFGELLKEIIQV 105
>gi|51246082|ref|YP_065966.1| nitrogen fixation protein (NifU) [Desulfotalea psychrophila LSv54]
gi|50877119|emb|CAG36959.1| probable nitrogen fixation protein (NifU) [Desulfotalea
psychrophila LSv54]
Length = 277
Score = 80.2 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++I+EVLD +RP + +D GDI V +S+RGAC C ++ T+K V L
Sbjct: 206 IKKIEEVLDKVIRPVLKKDDGDIELVDVDGDFVTVSLRGACKSCSNSQTTIKEYVEKKLR 265
Query: 178 HFVPEVKDIRT 188
V E +
Sbjct: 266 ELVLESLIVEE 276
>gi|255038680|ref|YP_003089301.1| nitrogen-fixing NifU domain-containing protein [Dyadobacter
fermentans DSM 18053]
gi|254951436|gb|ACT96136.1| nitrogen-fixing NifU domain protein [Dyadobacter fermentans DSM
18053]
Length = 85
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG-YRDGIVFLSMRGACSGCPSASETLK 169
++S ++ I++ L+ VRP + DGGD+ F D IV L ++G+C CP ++ T +
Sbjct: 1 MDSKEKTIELIEQALET-VRPYLHADGGDVKFVELTDDLIVKLELQGSCQSCPMSAMTFR 59
Query: 170 YGVANILNHFVPEVKDIRT 188
G+ + VP + + +
Sbjct: 60 AGLEESIRKAVPYINKVVS 78
>gi|289523173|ref|ZP_06440027.1| NifU domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503716|gb|EFD24880.1| NifU domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 89
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGV 172
+ V + I +V++ +RPA+ GGDI F GY + V + + GAC GCP A ETL++ V
Sbjct: 11 TQVQKDITDVIEKDIRPALVSHGGDIEFVGYDEAEKKVMVRLTGACGGCPFARETLRFQV 70
Query: 173 ANILNHFVPE-VKDIRTV 189
N+L +P+ V + +V
Sbjct: 71 ENVLKDRLPDIVASVESV 88
>gi|294660416|ref|NP_853167.2| hypothetical protein MGA_0005 [Mycoplasma gallisepticum str.
R(low)]
gi|284812075|gb|AAP56735.2| conserved hypothetical protein [Mycoplasma gallisepticum str.
R(low)]
gi|284930649|gb|ADC30588.1| conserved hypothetical protein [Mycoplasma gallisepticum str.
R(high)]
Length = 99
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 133 VARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+ RDGGD+ F+GY GIV + + G C GC T K GV IL +PEVK + +
Sbjct: 23 IKRDGGDLSFEGYEKGIVTIKLLGNCDGCSLVDMTYKDGVETILKAEIPEVKSVVLI 79
>gi|299822027|ref|ZP_07053914.1| NifU domain protein [Listeria grayi DSM 20601]
gi|299816655|gb|EFI83892.1| NifU domain protein [Listeria grayi DSM 20601]
Length = 79
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ ++ L + RP +ARDGGD +DG V + + GAC C S+ TLK G+ L
Sbjct: 8 EAVERALQ-KFRPYLARDGGDYELIDVTKDGTVKIKLLGACESCASSEITLKVGLETTLA 66
Query: 178 HFVPEVKDIRTV 189
+ K++ V
Sbjct: 67 DKLIGFKEVVQV 78
>gi|240171478|ref|ZP_04750137.1| hypothetical protein MkanA1_19346 [Mycobacterium kansasii ATCC
12478]
Length = 301
Score = 79.8 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
V +R+ + L+ RVRP + GGD+ D +V L+ G+C CPS++ TL+ V +
Sbjct: 93 DVHRRVSDALE-RVRPYLGSHGGDVDLLEVTDTVVRLAFTGSCKSCPSSAVTLELAVQDA 151
Query: 176 LNHFVPEVKDIRTV 189
+ PE+ I V
Sbjct: 152 IRAAAPEICAIELV 165
>gi|146299086|ref|YP_001193677.1| NifU domain-containing protein [Flavobacterium johnsoniae UW101]
gi|146153504|gb|ABQ04358.1| nitrogen-fixing NifU domain protein [Flavobacterium johnsoniae
UW101]
Length = 79
Score = 79.8 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYG 171
+ + + LD +RP + DGGDI D V + + GAC C TLK G
Sbjct: 2 TTEELTNNVLLALDE-IRPFLKSDGGDITLISIDDDKHVKVRLEGACISCSVNQMTLKAG 60
Query: 172 VANILNHFVPEVKDIRTV 189
V + + P+++ + +
Sbjct: 61 VETTIKKYAPQIETVVNI 78
>gi|255994079|ref|ZP_05427214.1| NifU-related protein [Eubacterium saphenum ATCC 49989]
gi|255993747|gb|EEU03836.1| NifU-related protein [Eubacterium saphenum ATCC 49989]
Length = 100
Score = 79.8 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
E+ +++ + L +V P +A G + +G+ + + GAC+ CPSA T++
Sbjct: 1 MNENTEMTDKKLVQTLKEKVDPLLAEHLGGSELVDFENGVARVRLTGACATCPSAELTME 60
Query: 170 YGVANILNHFVPEVKDI 186
V I+ PEVKD+
Sbjct: 61 SVVKEIVLENCPEVKDV 77
>gi|220934655|ref|YP_002513554.1| nitrogen-fixing NifU domain protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219995965|gb|ACL72567.1| nitrogen-fixing NifU domain protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 281
Score = 79.8 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
++E ++ R + +DGGDI F D V + ++GAC GCP ++ L+ V ++
Sbjct: 213 VREAVEE-ARKILMQDGGDIEFVAIEDRTVRVRLKGACVGCPRSTLDLRNVVERLVRSRA 271
Query: 181 PEVKDIRT 188
P V +
Sbjct: 272 PGVARVVN 279
>gi|290791697|gb|EFD95356.1| hypothetical protein GL50803_32838 [Giardia lamblia ATCC 50803]
Length = 197
Score = 79.5 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 67/158 (42%), Gaps = 10/158 (6%)
Query: 36 AEISPLASRIFSIPGIASVYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHN 94
E L + + + G+ + +T+ + Q W +R + + F P H
Sbjct: 40 PEAPSLQNDLMKVKGVKKLSISPTGVTLTVRSQGIWPSVRSAIEDKLYAAFDPSTP--HT 97
Query: 95 GGLGDMKLDDMGSGDFIESDSAVVQRIKEVL-DNRVRPAVARDGGDIVF---KGYRDG-I 149
+ + +M S ++ ++R E+L + P +ARDGG + + G +
Sbjct: 98 PDELRLAIQEMLSTGPRAPNN--IRRASELLIRAAINPFLARDGGSCSYRRHEVTDKGLV 155
Query: 150 VFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
V++ + G CSGC ++ T+ V ++P++ +R
Sbjct: 156 VYIELHGNCSGCSKSTTTMNTFVIGEFKKYIPDIHTVR 193
>gi|120434494|ref|YP_956868.1| NifU-like/thioredoxin-like protein [Gramella forsetii KT0803]
gi|117576644|emb|CAL65113.1| protein containing NifU-like domain / thioredoxin-like protein
[Gramella forsetii KT0803]
Length = 80
Score = 79.5 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYG 171
+ V +++ L +RP + DGG+I D +V + + GAC GC TLK G
Sbjct: 2 TSEEVKMNVEKALAE-IRPFLESDGGNISLVSIEDDRLVKVQLEGACVGCTVNQMTLKSG 60
Query: 172 VANILNHFVPEVKDIRTV 189
V + +VP+++ + +
Sbjct: 61 VEMTIKKYVPQIEKVVNI 78
>gi|323697813|ref|ZP_08109725.1| Fe-S cluster assembly protein NifU [Desulfovibrio sp. ND132]
gi|323457745|gb|EGB13610.1| Fe-S cluster assembly protein NifU [Desulfovibrio desulfuricans
ND132]
Length = 284
Score = 79.5 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I+ V+D VRP + DGG+I V + G CSGCPS+ TL+ V L V
Sbjct: 216 IERVIDEDVRPKLKADGGNIELVDIDRDAVVVRFLGMCSGCPSSRATLEGLVETALREKV 275
Query: 181 -PEVKDIRT 188
P +K +R
Sbjct: 276 DPGLK-VRE 283
>gi|237751304|ref|ZP_04581784.1| NifU family protein [Helicobacter bilis ATCC 43879]
gi|229372670|gb|EEO23061.1| NifU family protein [Helicobacter bilis ATCC 43879]
Length = 95
Score = 79.5 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASET 167
F SD+ ++ +++ + N VRP + +DGGDI ++ VF+ GACSGCPS + T
Sbjct: 15 DMFPFSDTELLAPVRQSI-NSVRPILLKDGGDIEIVEIKNACVFVRFHGACSGCPSKNAT 73
Query: 168 LKYGVANILNHFV-PEVKDIRTV 189
L + L + P++K + V
Sbjct: 74 LHNAILATLQRDIHPDIK-VSEV 95
>gi|158318602|ref|YP_001511110.1| iron-sulfur cluster assembly accessory protein [Frankia sp.
EAN1pec]
gi|158114007|gb|ABW16204.1| iron-sulfur cluster assembly accessory protein [Frankia sp.
EAN1pec]
Length = 206
Score = 79.5 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 8/120 (6%)
Query: 77 VLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARD 136
V + F +P + + E+D + ++++V+ +RP + D
Sbjct: 87 VESLTSSGFTFTNPNATSSCGCGNSFGTPEEPERAEADDRLRGQVEDVIAE-IRPFLQGD 145
Query: 137 GGDIVFKGY-----RDGI--VFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
GGD+ G V + + GAC+GC SAS T+ + + +PE+ + V
Sbjct: 146 GGDVQLVTVLAGNGEPGTAEVHIRLVGACNGCSSASATVTAVIEKRIKESLPEIGRVALV 205
>gi|298206741|ref|YP_003714920.1| NifU protein, putative [Croceibacter atlanticus HTCC2559]
gi|83849372|gb|EAP87240.1| NifU protein, putative [Croceibacter atlanticus HTCC2559]
Length = 80
Score = 79.1 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYGVA 173
+ ++ L+ +RP + DGGDI D VF+ + G C GC TLK GV
Sbjct: 4 QELYNSVQAALEE-IRPFLQNDGGDISLVSIEDDKTVFVKLMGNCVGCSVNQMTLKSGVE 62
Query: 174 NILNHFVPEVKDI 186
+ P+++ +
Sbjct: 63 MTIKKHAPQIEKV 75
>gi|302825922|ref|XP_002994529.1| hypothetical protein SELMODRAFT_48861 [Selaginella moellendorffii]
gi|300137483|gb|EFJ04406.1| hypothetical protein SELMODRAFT_48861 [Selaginella moellendorffii]
Length = 126
Score = 79.1 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 142 FKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+ +V L ++GAC CPS+ T+K G+ L +PE+ + V
Sbjct: 1 MEEIDGLVVKLKLQGACGSCPSSLMTMKMGIEARLKEKIPEIIGVEQV 48
Score = 39.0 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDS--AVVQRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIV 150
L + + +G ++++ + + + + + +RP + GG + +V
Sbjct: 32 EARLKEKIPEIIGVEQVQDTETGLELTEENVDKILSEIRPYLVGTGGGELTLVKIDGPVV 91
Query: 151 FLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+ + G +G T++ V L +P + ++ V
Sbjct: 92 KIRIEGPAAG----VMTVRVAVTQKLREKIPMIAAVQLV 126
>gi|284043999|ref|YP_003394339.1| nitrogen-fixing NifU domain protein [Conexibacter woesei DSM 14684]
gi|283948220|gb|ADB50964.1| nitrogen-fixing NifU domain protein [Conexibacter woesei DSM 14684]
Length = 306
Score = 79.1 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ +R++ LD VRP +A GGD+ ++G+ L + G+C GC +++ TL+ V L
Sbjct: 106 LEERVRAALDE-VRPYLASHGGDVELLAVQEGVARLRLVGSCRGCAASASTLEAVVEQAL 164
Query: 177 NHFVPEV 183
P++
Sbjct: 165 EQAAPDL 171
>gi|170721075|ref|YP_001748763.1| IscR-regulated protein YhgI [Pseudomonas putida W619]
gi|254767314|sp|B1J6F5|NFUA_PSEPW RecName: Full=Fe/S biogenesis protein nfuA
gi|169759078|gb|ACA72394.1| IscR-regulated protein YhgI [Pseudomonas putida W619]
Length = 194
Score = 79.1 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETL 168
+ DS + +RI L + P +A GG + DGI L G C GC A TL
Sbjct: 103 MVNEDSPINERINYYLQTEINPGLASHGGQVSLVDVVDDGIAVLQFGGGCQGCGQADVTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PE+K +R V
Sbjct: 163 KDGIERTLLERIPELKGVRDV 183
>gi|17228187|ref|NP_484735.1| hypothetical protein alr0692 [Nostoc sp. PCC 7120]
gi|17130037|dbj|BAB72649.1| alr0692 [Nostoc sp. PCC 7120]
Length = 158
Score = 79.1 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVAN 174
++QR++ L+ VRP + GD+ + V + G CS CP+++ TL GV
Sbjct: 84 PLLQRVQAALEE-VRPGLKDHHGDVELVAIKPPDTVEVRFIGTCSSCPASTLTLSQGVEQ 142
Query: 175 ILNHFVPEVKDIRTV 189
+ PE+ + V
Sbjct: 143 AIKALCPEIVTVIAV 157
>gi|307823832|ref|ZP_07654060.1| Fe-S cluster assembly protein NifU [Methylobacter tundripaludum
SV96]
gi|307735126|gb|EFO05975.1| Fe-S cluster assembly protein NifU [Methylobacter tundripaludum
SV96]
Length = 301
Score = 79.1 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Query: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVAR 135
+ ++ + + + + ++ +++I+EVL++ +RPA+
Sbjct: 178 DIEAILEKVLAEKGEKFDPTAAPVAAPEKVAAVKAPMTNLQRIKKIEEVLES-LRPALMA 236
Query: 136 DGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
DGGD+ +++M GAC+GC A+ T+ G+ L + E +
Sbjct: 237 DGGDVELVEVIGNTAYVNMTGACNGCQMAAMTI-AGIQQRLMEVMGEFIKV 286
>gi|325066683|ref|ZP_08125356.1| NifU-like protein [Actinomyces oris K20]
Length = 178
Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 67/169 (39%), Gaps = 13/169 (7%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSIPGIASV-YFGYDFITVGKDQYDWEHLRPPVLGM 80
V+ +G + F + A L ++ + SV G +T+ +DW V
Sbjct: 20 VIPDGLLPF-TGEVAHAPALLQKLLDDGTLRSVRVDGGGVLTLLGTGHDWRTEGARVRSA 78
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI 140
+++ G + D D A+ +++ D + V GG +
Sbjct: 79 LVDAL---------GAPKSWRGADTAHA--SGPDDALEAAARQIADGSLGTFVNSHGGAL 127
Query: 141 VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
V RDG+V ++M GAC CP+A T+ ++L P + ++R +
Sbjct: 128 VVHSVRDGVVEIAMEGACDHCPAAEITMHARFEHLLRRRCPWLVEVRRI 176
>gi|291276862|ref|YP_003516634.1| NifU-like protein [Helicobacter mustelae 12198]
gi|290964056|emb|CBG39896.1| nifU protein homolog [Helicobacter mustelae 12198]
Length = 92
Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
F D + + ++ ++ RP + DGGDI G R V++ ++GAC GC + TL
Sbjct: 1 MFPFGDEELQKPVEMSIEKT-RPHLLADGGDIAILGIRGPCVYVRLKGACVGCAHSHITL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
K + L + P++K +
Sbjct: 60 KNAIERQLKIDIHPDMKVV 78
>gi|26989102|ref|NP_744527.1| yhgI protein [Pseudomonas putida KT2440]
gi|148548525|ref|YP_001268627.1| HesB/YadR/YfhF-family protein [Pseudomonas putida F1]
gi|325276843|ref|ZP_08142540.1| HesB/YadR/YfhF-family protein [Pseudomonas sp. TJI-51]
gi|51702172|sp|Q88KB2|NFUA_PSEPK RecName: Full=Fe/S biogenesis protein nfuA
gi|254767312|sp|A5W5N3|NFUA_PSEP1 RecName: Full=Fe/S biogenesis protein nfuA
gi|24983933|gb|AAN67991.1|AE016431_7 yhgI protein [Pseudomonas putida KT2440]
gi|148512583|gb|ABQ79443.1| HesB/YadR/YfhF-family protein [Pseudomonas putida F1]
gi|313499540|gb|ADR60906.1| YhgI [Pseudomonas putida BIRD-1]
gi|324098009|gb|EGB96158.1| HesB/YadR/YfhF-family protein [Pseudomonas sp. TJI-51]
Length = 194
Score = 78.7 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETL 168
+ DS + +RI L + P +A GG + DGI L G C GC A TL
Sbjct: 103 MVNEDSPINERINYYLQTEINPGLASHGGQVSLVDVVDDGIAVLQFGGGCQGCGQADVTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PE+K +R V
Sbjct: 163 KEGIERTLLERIPELKGVRDV 183
>gi|167032993|ref|YP_001668224.1| IscR-regulated protein YhgI [Pseudomonas putida GB-1]
gi|254767313|sp|B0KKI2|NFUA_PSEPG RecName: Full=Fe/S biogenesis protein nfuA
gi|166859481|gb|ABY97888.1| IscR-regulated protein YhgI [Pseudomonas putida GB-1]
Length = 194
Score = 78.7 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETL 168
+ DS + +RI L + P +A GG + DGI L G C GC A TL
Sbjct: 103 MVNEDSPINERINYYLQTEINPGLASHGGQVSLVDVVDDGIAVLQFGGGCQGCGQADVTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PE+K +R V
Sbjct: 163 KEGIERTLLERIPELKGVRDV 183
>gi|317485383|ref|ZP_07944262.1| NifU-like N terminal domain-containing protein [Bilophila
wadsworthia 3_1_6]
gi|316923342|gb|EFV44549.1| NifU-like N terminal domain-containing protein [Bilophila
wadsworthia 3_1_6]
Length = 282
Score = 78.7 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 44/95 (46%)
Query: 83 EHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVF 142
E + I+ + + I ++ +Q++ +VL + VRP +A DGGDI
Sbjct: 174 ECLDTIQDILDEELGKPKLKEFNPAPKSIMTNVQRMQKVMQVLQDEVRPRLAADGGDIEL 233
Query: 143 KGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V +++RG CS C S + TLK V IL
Sbjct: 234 VDVDGHRVVVALRGLCSNCSSRTVTLKDLVEKILR 268
>gi|4325122|gb|AAD17270.1| NifV [Frankia sp. EuIK1]
Length = 206
Score = 78.3 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 8/120 (6%)
Query: 77 VLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARD 136
V + F +P + + E+D + ++++V+ +RP + D
Sbjct: 87 VESLTSSGFTFTNPNATSSCGCGNSFGTPEEPERAEADERLRGQVEDVIAE-IRPFLQGD 145
Query: 137 GGDIVFKGYRDG-------IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
GGD+ G V + + GAC+GC SAS T+ + + +PE+ + V
Sbjct: 146 GGDVQLVTVLAGNGQPGTAEVHIRLVGACNGCSSASATVTAVIEKRIKESLPEIGRVALV 205
>gi|104782423|ref|YP_608921.1| hypothetical protein PSEEN3379 [Pseudomonas entomophila L48]
gi|122402793|sp|Q1I898|NFUA_PSEE4 RecName: Full=Fe/S biogenesis protein nfuA
gi|95111410|emb|CAK16130.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 194
Score = 78.3 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETL 168
+ DS + +RI L + P +A GG + DGI L G C GC A TL
Sbjct: 103 MVNEDSPINERINYYLQTEINPGLASHGGAVSLVDVVDDGIAVLQFGGGCQGCGQADVTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PE+K +R V
Sbjct: 163 KEGIERTLLERIPELKGVRDV 183
>gi|311086265|gb|ADP66347.1| iron-sulfur cluster scaffold protein (YhgI) [Buchnera aphidicola
str. LL01 (Acyrthosiphon pisum)]
Length = 192
Score = 78.3 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 61/179 (34%), Gaps = 32/179 (17%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFIT-------------------VGKDQY 68
HF++ E R+F + PG + G F V KD
Sbjct: 11 HFTSLLSNEPENTQIRVFVVNPGTPNAECGVAFCPENEIELSDIQLKYDGFFVYVNKDTI 70
Query: 69 DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNR 128
+L+ V+ ++ + S + + S + +++K L+
Sbjct: 71 --SYLKNSVIDLVTDKIGSQLTLKAPYAKNNFSKKVSSS---------LEEKVKCFLNLE 119
Query: 129 VRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+ P ++ GG + +GI + G C+GC TLK V L E+K +
Sbjct: 120 INPQLSMHGGRVELIKIDKNGIAAIQFSGGCNGCSMIGSTLKETVEKKLLSSFSEIKKV 178
>gi|320534511|ref|ZP_08034970.1| NifU-like domain protein [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320133275|gb|EFW25764.1| NifU-like domain protein [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 178
Score = 77.9 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 68/169 (40%), Gaps = 13/169 (7%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSIPGIASV-YFGYDFITVGKDQYDWEHLRPPVLGM 80
V+ +G + F + A L ++ + SV G +T+ +DW V
Sbjct: 20 VVPDGLLPF-TGEVAHAPALLQKLMDDGTLRSVRVDGGGVLTLLGAGHDWRTEGARVRSA 78
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI 140
+++ G P G D A+ +++ D + + GG +
Sbjct: 79 LVDAL--GAPTSWKGASTSHASGP---------DDALEAAARQIADGSLGTFINSHGGAL 127
Query: 141 VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
V + RDG+V ++M G+C CP+A T+ ++L P + ++R V
Sbjct: 128 VVQSVRDGVVEIAMEGSCDHCPAAEITMHARFEHLLRRRCPWMVEVRRV 176
>gi|326772596|ref|ZP_08231880.1| conserved hypothetical protein [Actinomyces viscosus C505]
gi|326637228|gb|EGE38130.1| conserved hypothetical protein [Actinomyces viscosus C505]
Length = 178
Score = 77.9 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 67/169 (39%), Gaps = 13/169 (7%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSIPGIASV-YFGYDFITVGKDQYDWEHLRPPVLGM 80
V+ +G + F + A L ++ + SV G +T+ +DW V
Sbjct: 20 VIPDGLLAF-TGEVAHAPALLQQLLDDGTLRSVRVDGGGVLTLLGTGHDWRTEGARVRSA 78
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI 140
+++ G P + D A+ +++ D + V GG +
Sbjct: 79 LVDAL--GAP---------KSWKGAATAHASGPDDALEAAARQIADGSLGTFVNSHGGAL 127
Query: 141 VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
V RDG+V ++M GAC CP+A T+ ++L P + ++R +
Sbjct: 128 VVHSVRDGVVEIAMEGACDHCPAAEITMHARFEHLLRRRCPWLVEVRRI 176
>gi|114321604|ref|YP_743287.1| HesB/YadR/YfhF-family protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114227998|gb|ABI57797.1| HesB/YadR/YfhF-family protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 211
Score = 77.9 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 66/183 (36%), Gaps = 11/183 (6%)
Query: 18 PGQVVLVEGAIHFSNA-KEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRP 75
P + E HF + S + RI+ + PG + G + + D L
Sbjct: 3 PTIQISPEAQAHFRQLLSDPARSGASLRIYVLNPGSREAHCGIGYRSADTPGGDEATLAF 62
Query: 76 PVLGM----IMEHFISGDPII--HNGGLGDMKLDDMGSGDFIESDS--AVVQRIKEVLDN 127
+ ++ G + G G + + + E D+ ++ +RI VL+
Sbjct: 63 EGFELHYRPTQAFYLEGVVVDYRDAGRGGRLTMKAPNAARLPEPDAMQSLEERITHVLET 122
Query: 128 RVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+ P +A G + + + G + G C GC +TL V L VP + I
Sbjct: 123 EINPDLAAHDGSVTVERVDEQGRALIRFAGGCQGCAVVDQTLTGLVEKTLLARVPALTGI 182
Query: 187 RTV 189
R V
Sbjct: 183 RDV 185
>gi|118470355|ref|YP_886620.1| hypothetical protein MSMEG_2268 [Mycobacterium smegmatis str. MC2
155]
gi|118171642|gb|ABK72538.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
155]
Length = 295
Score = 77.9 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 128 RVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
+VRP + GGD+ G F+ + GAC+GC ++ TL+ V L V V +
Sbjct: 100 QVRPQLRSHGGDVTLVRIESGTAFVRLEGACNGCSMSAVTLRQLVETALLEGVQGVSKVE 159
>gi|77459326|ref|YP_348833.1| HesB/YadR/YfhF [Pseudomonas fluorescens Pf0-1]
gi|123604407|sp|Q3KBL2|NFUA_PSEPF RecName: Full=Fe/S biogenesis protein nfuA
gi|77383329|gb|ABA74842.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 194
Score = 77.5 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETL 168
+ +DS + +RI L + P +A GG + DGI L G C GC A TL
Sbjct: 103 MVNADSPINERINYYLQTEINPGLASHGGQVSLIDVVEDGIAVLQFGGGCQGCGQADVTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PE+K +R V
Sbjct: 163 KEGIERTLLERIPELKGVRDV 183
>gi|70731021|ref|YP_260762.1| yhgI protein [Pseudomonas fluorescens Pf-5]
gi|123654765|sp|Q4KAH1|NFUA_PSEF5 RecName: Full=Fe/S biogenesis protein nfuA
gi|68345320|gb|AAY92926.1| yhgI protein [Pseudomonas fluorescens Pf-5]
Length = 194
Score = 77.5 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETL 168
+ +DS V +RI L + P +A GG + DGI L G C GC A TL
Sbjct: 103 MVNADSPVNERINYYLQTEINPGLASHGGQVSLIDVVEDGIAVLQFGGGCQGCGQADVTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PE+K +R V
Sbjct: 163 KEGIERTLLERIPELKGVRDV 183
>gi|118464609|ref|YP_881874.1| hypothetical protein MAV_2683 [Mycobacterium avium 104]
gi|118165896|gb|ABK66793.1| conserved hypothetical protein [Mycobacterium avium 104]
Length = 316
Score = 77.5 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
V +R+ + LD+ VRP + GGD+ V L++ G+C CPS++ TL+ V +
Sbjct: 92 DVGRRVADALDS-VRPYLGSHGGDVHLLEIVGDTVRLALDGSCKSCPSSAVTLELTVEDA 150
Query: 176 LNHFVPEVKDIRTV 189
+ PE+ I V
Sbjct: 151 VRSAAPEISSIEVV 164
>gi|91214967|ref|ZP_01251939.1| nifU-like domain protein [Psychroflexus torquis ATCC 700755]
gi|91186572|gb|EAS72943.1| nifU-like domain protein [Psychroflexus torquis ATCC 700755]
Length = 87
Score = 77.5 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPSASETLKYGVA 173
+ + ++ LD +RP + DGGDI D +V + + G C C TLK GV
Sbjct: 5 QELRKTVEIALDE-IRPFLKSDGGDIELLSIEDDSLVKVQLLGTCVDCTVNQMTLKSGVE 63
Query: 174 NILNHFVPEVKDIRTV 189
+ + P++K++ V
Sbjct: 64 MTIKKYAPQIKEVINV 79
>gi|297520132|ref|ZP_06938518.1| putative DNA uptake protein [Escherichia coli OP50]
Length = 70
Score = 77.5 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 133 VARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
+A GG + DG L G C+GC TLK G+ L + PE+K +R
Sbjct: 2 LAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGVRD 58
>gi|71892342|ref|YP_278076.1| membrane-bound protein in GNT I transport system [Candidatus
Blochmannia pennsylvanicus str. BPEN]
gi|123640816|sp|Q492A3|NFUA_BLOPB RecName: Full=Fe/S biogenesis protein nfuA
gi|71796448|gb|AAZ41199.1| membrane-bound protein in GNT I transport system [Candidatus
Blochmannia pennsylvanicus str. BPEN]
Length = 196
Score = 77.5 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 62/179 (34%), Gaps = 14/179 (7%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
+ HF+ + R+F + PG F + + + + +
Sbjct: 4 ITPIAQKHFTKLLAGKKPGTQIRVFVVNPGTVHAKCNVCFCPPEEFKTSDVVIEFDLFSV 63
Query: 81 IMEHF------ISGDPIIHNGGLGDMKLDDMGSGDFIESD------SAVVQRIKEVLDNR 128
++ + ++ N + + + + + R++ VL +
Sbjct: 64 HVDSVYVSFLKDAKIDVMINELDSQLTIKAPNATKECNNTRNNMNNDLLEDRVRNVLQFQ 123
Query: 129 VRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+ P + GG + D + + G C+GC AS T+K G+ L + PE+K +
Sbjct: 124 INPQLELHGGSVSLIRITEDLLAVIKFYGGCNGCAMASYTIKEGIETTLKNLFPELKGV 182
>gi|157736773|ref|YP_001489456.1| NifU-like protein [Arcobacter butzleri RM4018]
gi|315635952|ref|ZP_07891213.1| NifU family protein [Arcobacter butzleri JV22]
gi|157698627|gb|ABV66787.1| conserved hypothetical NifU-like protein [Arcobacter butzleri
RM4018]
gi|315479736|gb|EFU70408.1| NifU family protein [Arcobacter butzleri JV22]
Length = 92
Score = 77.5 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+D + + +++N++ P +ARDGG I ++ +F+ ++GAC GC ++S TL
Sbjct: 1 MMPFTDEDLQNPVSSIIENKISPMLARDGGAIKLLAIKNARIFVQLQGACVGCSASSSTL 60
Query: 169 KYGVANILNHFV-PEVK 184
KY V L + P+++
Sbjct: 61 KYIVEKELKSAIHPDLE 77
>gi|330808713|ref|YP_004353175.1| Fe/S biogenesis protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376821|gb|AEA68171.1| Fe/S biogenesis protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 194
Score = 77.5 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETL 168
+ +DS V +RI L + P +A GG + DGI L G C GC A TL
Sbjct: 103 MVNADSPVNERINYYLQTEINPGLASHGGQVSLIDVVEDGIAVLQFGGGCQGCGQADVTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PE+K +R V
Sbjct: 163 KEGIERTLLERIPELKGVRDV 183
>gi|328465264|gb|EGF36521.1| NifU family protein [Listeria monocytogenes 1816]
Length = 82
Score = 77.5 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ + L + RP + RDGGD +DG+V + + GAC CPS+ TLK G+ L
Sbjct: 7 AEVDKAL-KKFRPFLVRDGGDYELIEVTQDGVVKIKLLGACETCPSSDMTLKMGIELTLA 65
Query: 178 HFV 180
+
Sbjct: 66 EKL 68
>gi|15617137|ref|NP_240350.1| hypothetical protein BU544 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219682444|ref|YP_002468828.1| iron-sulfur cluster scaffold protein (YhgI) [Buchnera aphidicola
str. Tuc7 (Acyrthosiphon pisum)]
gi|11387308|sp|P57609|NFUA_BUCAI RecName: Full=Fe/S biogenesis protein nfuA
gi|254767293|sp|B8D868|NFUA_BUCAT RecName: Full=Fe/S biogenesis protein nfuA
gi|25356744|pir||D84993 hypothetical protein [imported] - Buchnera sp. (strain APS)
gi|10039202|dbj|BAB13236.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon
pisum)]
gi|219622177|gb|ACL30333.1| iron-sulfur cluster scaffold protein (YhgI) [Buchnera aphidicola
str. Tuc7 (Acyrthosiphon pisum)]
gi|311086840|gb|ADP66921.1| iron-sulfur cluster scaffold protein (YhgI) [Buchnera aphidicola
str. TLW03 (Acyrthosiphon pisum)]
gi|311087429|gb|ADP67509.1| iron-sulfur cluster scaffold protein (YhgI) [Buchnera aphidicola
str. JF99 (Acyrthosiphon pisum)]
gi|311087919|gb|ADP67998.1| iron-sulfur cluster scaffold protein (YhgI) [Buchnera aphidicola
str. JF98 (Acyrthosiphon pisum)]
Length = 192
Score = 77.1 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 61/179 (34%), Gaps = 32/179 (17%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFIT-------------------VGKDQY 68
HF++ E R+F + PG + G F V KD
Sbjct: 11 HFTSLLSNEPENTQIRVFIVNPGTPNAECGVAFCPENEIELSDIQLKYDGFFVYVNKDTI 70
Query: 69 DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNR 128
+L+ V+ ++ + S + + S + +++K L+
Sbjct: 71 --SYLKNSVIDLVTDKIGSQLTLKAPYAKNNFSKKVSSS---------LEEKVKCFLNLE 119
Query: 129 VRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+ P ++ GG + +GI + G C+GC TLK V L E+K +
Sbjct: 120 INPQLSMHGGRVELIKIDKNGIAAIQFSGGCNGCSMIGSTLKETVEKKLLSSFSEIKKV 178
>gi|320162486|ref|YP_004175711.1| hypothetical protein ANT_30850 [Anaerolinea thermophila UNI-1]
gi|319996340|dbj|BAJ65111.1| hypothetical protein ANT_30850 [Anaerolinea thermophila UNI-1]
Length = 89
Score = 77.1 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 35/73 (47%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+R++ +++ GG + G+ ++ + + GAC GCP + T+ VA +
Sbjct: 13 TEERLRALIETLDTYIQQYHGGSVEMVGFDGKVLKVRLGGACEGCPLSPTTINGWVAGTV 72
Query: 177 NHFVPEVKDIRTV 189
F PE++ + V
Sbjct: 73 RQFFPEIEKVEAV 85
>gi|300869885|ref|YP_003784756.1| NifU like N terminal domain-containing protein [Brachyspira
pilosicoli 95/1000]
gi|300687584|gb|ADK30255.1| NifU like N terminal domain protein [Brachyspira pilosicoli
95/1000]
Length = 277
Score = 77.1 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 96 GLGDMKLDDMGSGDFIESDSAV-----VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIV 150
L D+ +++ + + ++ + +++I+E ++ + P + DGG IV
Sbjct: 179 KLEDILNEELAERERAQKNAPLTTVQKIKKIEEAIETVINPMLKMDGGSCKLVDIEGNIV 238
Query: 151 FLSMRGACSGCPSASETLKYGVANILNHFVP---EVKDI 186
+S +GACS C ++ TLK V + V EV +
Sbjct: 239 KISFKGACSSCMASKNTLKGFVEPKIKELVDKDLEVVGV 277
>gi|219681889|ref|YP_002468275.1| iron-sulfur cluster scaffold protein (YhgI) [Buchnera aphidicola
str. 5A (Acyrthosiphon pisum)]
gi|257471594|ref|ZP_05635593.1| iron-sulfur cluster scaffold protein (YhgI) [Buchnera aphidicola
str. LSR1 (Acyrthosiphon pisum)]
gi|254767292|sp|B8D9W6|NFUA_BUCA5 RecName: Full=Fe/S biogenesis protein nfuA
gi|219624732|gb|ACL30887.1| iron-sulfur cluster scaffold protein (YhgI) [Buchnera aphidicola
str. 5A (Acyrthosiphon pisum)]
Length = 192
Score = 77.1 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 61/179 (34%), Gaps = 32/179 (17%)
Query: 29 HFSNAKEAEISPLASRIFSI-PGIASVYFGYDFIT-------------------VGKDQY 68
HF++ E R+F + PG + G F V KD
Sbjct: 11 HFTSLLSNEPENTQIRVFIVNPGTPNAECGVAFCPENEIELSDIQLKYDGFFVYVNKDTI 70
Query: 69 DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNR 128
+L+ V+ ++ + S + + S + +++K L+
Sbjct: 71 --SYLKNSVIDLVTDKIGSQLTLKAPYAKNNFSKKVSSS---------LEEKVKCFLNLE 119
Query: 129 VRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+ P ++ GG + +GI + G C+GC TLK V L E+K +
Sbjct: 120 INPQLSMHGGRVELMKIDENGIAAIQFSGGCNGCSMIGSTLKETVEKKLLSSFSEIKKV 178
>gi|296125736|ref|YP_003632988.1| Fe-S cluster assembly protein NifU [Brachyspira murdochii DSM
12563]
gi|296017552|gb|ADG70789.1| Fe-S cluster assembly protein NifU [Brachyspira murdochii DSM
12563]
Length = 277
Score = 77.1 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 96 GLGDMKLDDMGSGDFIESDSAV-----VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIV 150
L D+ +++ + ++ + V++I+E L+ + P + DGG V
Sbjct: 179 KLEDILNEELAEMEREAKNAPLTTVQKVKKIEEALERVINPMLKMDGGSCRLVDVDGNKV 238
Query: 151 FLSMRGACSGCPSASETLKYGVANILNHFVP---EVKDI 186
+ +GACS C S+ TLK V L V EV +
Sbjct: 239 MIEFKGACSSCASSKNTLKGFVEPKLQEIVSKDLEVVGV 277
>gi|75910796|ref|YP_325092.1| nitrogen-fixing NifU-like protein [Anabaena variabilis ATCC 29413]
gi|75704521|gb|ABA24197.1| Nitrogen-fixing NifU-like protein [Anabaena variabilis ATCC 29413]
Length = 158
Score = 77.1 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVAN 174
++QR++ L+ VRP + GD+ + V + G CS C +++ TL GV
Sbjct: 84 PLLQRVEAALEE-VRPGLKSHHGDVELVAIKPPDTVEVRFIGTCSNCAASTLTLSQGVEQ 142
Query: 175 ILNHFVPEVKDIRTV 189
+ PE+ + V
Sbjct: 143 AIKALCPEIMTVIAV 157
>gi|288918993|ref|ZP_06413335.1| iron-sulfur cluster assembly accessory protein [Frankia sp. EUN1f]
gi|288349639|gb|EFC83874.1| iron-sulfur cluster assembly accessory protein [Frankia sp. EUN1f]
Length = 206
Score = 77.1 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 8/120 (6%)
Query: 77 VLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARD 136
V + F +P + E+D+ + ++++V+ +RP + D
Sbjct: 87 VESLTSSGFTFTNPNATRSCGCGNSFGTPEEPERAEADAKLRAQVEDVMAE-IRPFLQGD 145
Query: 137 GGDIVFKGYRDG-------IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
GGD+ G V + + GAC+GC SAS T+ + + +PE+ + V
Sbjct: 146 GGDVQVVTVLAGNGQPGTAEVHIRLVGACNGCSSASATVTAVIEKRIKESLPEIGRVALV 205
>gi|298373186|ref|ZP_06983176.1| Fe-S cluster assembly protein NifU [Bacteroidetes oral taxon 274
str. F0058]
gi|298276090|gb|EFI17641.1| Fe-S cluster assembly protein NifU [Bacteroidetes oral taxon 274
str. F0058]
Length = 93
Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ ++ VRP + GGDI V + + GACS CPS T++ + + L
Sbjct: 3 LRDKVNHIVAETVRPILRSHGGDIEVVEVEGKNVKVRLLGACSSCPSMQNTMEEIIESTL 62
Query: 177 NHFV 180
+
Sbjct: 63 RQEL 66
>gi|284931439|gb|ADC31377.1| conserved hypothetical protein [Mycoplasma gallisepticum str. F]
Length = 99
Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 137 GGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
GGD+ F+GY GIV + + G C GC T K GV IL +PEVK + +
Sbjct: 27 GGDLSFEGYEKGIVTIRLLGNCDGCSLVDMTYKDGVETILKAEIPEVKSVVLI 79
>gi|288817769|ref|YP_003432116.1| nitrogen-fixing NifU-like protein [Hydrogenobacter thermophilus
TK-6]
gi|288787168|dbj|BAI68915.1| nitrogen-fixing NifU-like protein [Hydrogenobacter thermophilus
TK-6]
gi|308751367|gb|ADO44850.1| Rieske (2Fe-2S) iron-sulfur domain protein [Hydrogenobacter
thermophilus TK-6]
Length = 275
Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI 140
+M+ +G I+ I D + IK + +RP + GGD+
Sbjct: 53 LMKEDSAGKDILLKAVREPEIYSLFLKHGIIREDDRT-KAIKAL--ELIRPYIRSHGGDV 109
Query: 141 VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
F ++ +++ +RG C+GC S TL+ + + ++P ++ +
Sbjct: 110 EFVDLKEKTLYVRLRGTCTGCSQVSFTLQQTILEAVQAYIPHIEKVE 156
>gi|146281734|ref|YP_001171887.1| Fe-S cluster assembly protein NifU [Pseudomonas stutzeri A1501]
gi|145569939|gb|ABP79045.1| Fe-S cluster assembly protein NifU [Pseudomonas stutzeri A1501]
Length = 316
Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++RI+ VL++ +RP + RD GD+ +++ + GAC+GC AS TL G+ L
Sbjct: 236 IRRIERVLES-IRPTLQRDHGDVELLDVEGKNIYVKLTGACTGCQMASMTL-SGIQQRLI 293
Query: 178 HFVPEVKDIRTV 189
+ E + V
Sbjct: 294 EELGEFVKVVPV 305
>gi|307720595|ref|YP_003891735.1| nitrogen-fixing NifU domain-containing protein [Sulfurimonas
autotrophica DSM 16294]
gi|306978688|gb|ADN08723.1| nitrogen-fixing NifU domain protein [Sulfurimonas autotrophica DSM
16294]
Length = 122
Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
D + + +K L +V V GGDI G ++G V++ + GAC GC + T K V
Sbjct: 5 DEDIYEAVKNYL-PKVSEYVNSHGGDIKLLGAKEGTVYIELTGACGGCSMSLMTTKIVVQ 63
Query: 174 NILNHFV-PE--VKDI 186
L + PE V ++
Sbjct: 64 KKLRELIHPELVVTNV 79
>gi|152992899|ref|YP_001358620.1| hypothetical protein SUN_1310 [Sulfurovum sp. NBC37-1]
gi|151424760|dbj|BAF72263.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 116
Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+D + Q +K L V V GG I G ++G V++ + G C GC + T K V
Sbjct: 4 NDQDIYQAVKHHL-PSVNEYVESHGGAIKLLGVKNGTVYIELTGTCHGCSMSLMTTKMVV 62
Query: 173 ANILNHFV-PEVKDI 186
L + PE+ +
Sbjct: 63 QKKLRELIHPELNVV 77
>gi|212702241|ref|ZP_03310369.1| hypothetical protein DESPIG_00252 [Desulfovibrio piger ATCC 29098]
gi|212674304|gb|EEB34787.1| hypothetical protein DESPIG_00252 [Desulfovibrio piger ATCC 29098]
Length = 260
Score = 76.8 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 39/92 (42%)
Query: 89 DPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG 148
I+ + ++ +Q + + ++ +RP +A DGGDI
Sbjct: 160 AEILAAELKQKPLTELRPVSKPRMTNVQRMQLVMKTIEEEIRPQLAADGGDIELVDVDGK 219
Query: 149 IVFLSMRGACSGCPSASETLKYGVANILNHFV 180
V +S+RG C+ C S+ T++ V +L V
Sbjct: 220 RVVVSLRGRCAQCRSSEVTIRNLVERVLREHV 251
>gi|323450669|gb|EGB06549.1| hypothetical protein AURANDRAFT_9527 [Aureococcus anophagefferens]
Length = 69
Score = 76.4 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDG--IVFLSMRGACSGCPSASETLKYGVANI 175
++ + +VLD +VRP + DGG++ V L + GAC CPS+++T+K G+ +
Sbjct: 4 LENVDKVLD-QVRPYLVADGGNVAVVSADPDSKDVILHLEGACGSCPSSTQTMKMGIERV 62
Query: 176 LNHF 179
L
Sbjct: 63 LRER 66
>gi|146307188|ref|YP_001187653.1| HesB/YadR/YfhF-family protein [Pseudomonas mendocina ymp]
gi|254767311|sp|A4XUA5|NFUA_PSEMY RecName: Full=Fe/S biogenesis protein nfuA
gi|145575389|gb|ABP84921.1| HesB/YadR/YfhF-family protein [Pseudomonas mendocina ymp]
Length = 194
Score = 76.4 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETL 168
+ DS + +RI L + P +A GG + +GI L G C GC A TL
Sbjct: 103 MVNEDSPLNERINYYLQTEINPGLASHGGQVSLVDVVEEGIAVLRFGGGCQGCGQADYTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PE+K +R V
Sbjct: 163 KEGIEKTLLERIPELKGVRDV 183
>gi|183981881|ref|YP_001850172.1| hypothetical protein MMAR_1868 [Mycobacterium marinum M]
gi|183175207|gb|ACC40317.1| conserved hypothetical protein [Mycobacterium marinum M]
Length = 324
Score = 76.4 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETLKY 170
V +R+ + LD VRP + GGD+ G V L+ G+C CPS++ TL+
Sbjct: 105 DVHRRVSDALDG-VRPYLGSHGGDVELIDVVTGRSGDITVRLAFTGSCKSCPSSAVTLEL 163
Query: 171 GVANILNHFVPEVKDIRTV 189
V + + PE+ I V
Sbjct: 164 AVQDAVRAAAPEISAIEVV 182
>gi|154414462|ref|XP_001580258.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
gi|121914474|gb|EAY19272.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
Length = 103
Score = 76.4 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 97 LGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRG 156
+ + + F ++ ++ V++ RVRPA+ DGGDI K DGIV + M G
Sbjct: 5 ISHATNSPIFTSFFAKASKEFFDKVNAVIEERVRPALLSDGGDITLKDITDGIVTVQMFG 64
Query: 157 ACSGCPSASETLKYGVANILNHFVP--EVKDIRTV 189
C GCPS TL + + L ++ DI+ +
Sbjct: 65 HCVGCPSKQITLNSRILDCLQDEFGDKDIVDIKEI 99
>gi|327479981|gb|AEA83291.1| Fe-S cluster assembly protein NifU [Pseudomonas stutzeri DSM 4166]
Length = 316
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++R++ VL++ +RP + RD GD+ +++ + GAC+GC AS TL G+ L
Sbjct: 236 IRRVERVLES-IRPTLQRDHGDVELLDVEGKNIYVKLTGACTGCQMASMTL-SGIQQRLI 293
Query: 178 HFVPEVKDIRTV 189
+ E + V
Sbjct: 294 EELGEFVKVVPV 305
>gi|288941129|ref|YP_003443369.1| Fe-S cluster assembly protein NifU [Allochromatium vinosum DSM 180]
gi|288896501|gb|ADC62337.1| Fe-S cluster assembly protein NifU [Allochromatium vinosum DSM 180]
Length = 302
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Query: 88 GDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD 147
G+ + +G + ++RI+ VLD+ VRP + RD GD+
Sbjct: 188 GESGKSFAPAAGTTPLPVQAGRPRLTTVERIRRIEAVLDS-VRPTLQRDHGDVELVDVDG 246
Query: 148 GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
V++ MRGAC+GC A+ TL G+ + + E +
Sbjct: 247 RQVYVKMRGACAGCQMAAVTL-EGIQERMVEALGEFVRV 284
>gi|256372264|ref|YP_003110088.1| nitrogen-fixing NifU domain protein [Acidimicrobium ferrooxidans
DSM 10331]
gi|256008848|gb|ACU54415.1| nitrogen-fixing NifU domain protein [Acidimicrobium ferrooxidans
DSM 10331]
Length = 109
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLK 169
+D + ++++++ ++RPAV DGGD+ G+V + + GACS C ++ T++
Sbjct: 4 PNDERDPEAVRDLIE-QLRPAVQYDGGDLELVDVNTETGVVRVRLTGACSSCAISTSTIQ 62
Query: 170 YGVANILNHFVPEVKDIR 187
GV I+ V +
Sbjct: 63 LGVERIVKGRFSWVTAVE 80
>gi|116750110|ref|YP_846797.1| Fe-S cluster assembly protein NifU [Syntrophobacter fumaroxidans
MPOB]
gi|116699174|gb|ABK18362.1| Fe-S cluster assembly protein NifU [Syntrophobacter fumaroxidans
MPOB]
Length = 276
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ I+E +D +RP++ +DGGDI V ++ RGAC+ C +A+ TLK V L
Sbjct: 203 IRLIEETIDQEIRPSLKQDGGDIELVDVVGNRVLVATRGACASCQAANRTLKNFVEVKLR 262
Query: 178 HFV-PEVKDIRTV 189
V PE+ + V
Sbjct: 263 ELVLPELV-VEEV 274
>gi|312960571|ref|ZP_07775077.1| Fe/S biogenesis protein [Pseudomonas fluorescens WH6]
gi|311285097|gb|EFQ63672.1| Fe/S biogenesis protein [Pseudomonas fluorescens WH6]
Length = 194
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYG 171
+DS V +RI L + P +A GG + DGI L G C GC A TL+ G
Sbjct: 106 ADSPVNERINYYLQTEINPGLASHGGQVSLIDVVEDGIAVLKFGGGCQGCGQADVTLREG 165
Query: 172 VANILNHFVPEVKDIRTV 189
+ L +PE+K +R V
Sbjct: 166 IERTLLERIPELKGVRDV 183
>gi|298492327|ref|YP_003722504.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein ['Nostoc
azollae' 0708]
gi|298234245|gb|ADI65381.1| Rieske (2Fe-2S) iron-sulfur domain protein ['Nostoc azollae' 0708]
Length = 270
Score = 76.0 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 18/137 (13%)
Query: 69 DWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV---------- 118
+W+ + V + S + +K D++ S + D +V
Sbjct: 20 EWDESQRCVAVGLQRAIESLHKAALTNLVRSLKQDNI-SALYNAVDDEIVYAVLLYHNLV 78
Query: 119 -----QRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGV 172
+RIK L +RP++ D+ + + + + G+CS C S++ TL V
Sbjct: 79 KPPLSERIKTAL-TEIRPSLQSHDSDVELVAIKPPDRIDVKLIGSCSNCASSTLTLTQLV 137
Query: 173 ANILNHFVPEVKDIRTV 189
+ + PE+ +I V
Sbjct: 138 EQTVKKYCPEISNIVAV 154
>gi|222056132|ref|YP_002538494.1| Fe-S cluster assembly protein NifU [Geobacter sp. FRC-32]
gi|221565421|gb|ACM21393.1| Fe-S cluster assembly protein NifU [Geobacter sp. FRC-32]
Length = 286
Score = 76.0 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q I+E L+N VRP + DGGD+ G V ++ R AC+GC S+ T K V L
Sbjct: 214 MQLIQETLENEVRPQLWADGGDLELIDIDGGKVQIAFRKACAGCASSGFTAK-FVEQKLR 272
Query: 178 HFVPEVKDIRTV 189
V + + V
Sbjct: 273 ELVSDDITVEEV 284
>gi|255024382|ref|ZP_05296368.1| NifU family protein [Listeria monocytogenes FSL J1-208]
Length = 67
Score = 76.0 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ + L + RP + RDGGD +DG+V + + GAC CPS+ TLK G+ L
Sbjct: 7 AEVDKAL-KKFRPFLVRDGGDYELIEVTQDGVVKIKLLGACETCPSSDMTLKMGIELTLA 65
Query: 178 HF 179
Sbjct: 66 EK 67
>gi|142396|gb|AAA22167.1| nifU protein [Azotobacter vinelandii]
Length = 312
Score = 76.0 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
S+ ++RI+ VL +RP + RD GD+ V++ + GAC+GC AS TL G+
Sbjct: 228 SNLQRIRRIETVL-AAIRPTLQRDKGDVELIDVDGKNVYVKLTGACTGCQMASMTL-GGI 285
Query: 173 ANILNHFVPEVKDIRTV 189
L + E + V
Sbjct: 286 QQRLIEELGEFVKVIPV 302
>gi|229590129|ref|YP_002872248.1| hypothetical protein PFLU2664 [Pseudomonas fluorescens SBW25]
gi|259511745|sp|C3K9S0|NFUA_PSEFS RecName: Full=Fe/S biogenesis protein nfuA
gi|229361995|emb|CAY48896.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 194
Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYG 171
+DS V +RI L + P +A GG + DGI L G C GC A TL+ G
Sbjct: 106 ADSPVNERINYYLQTEINPGLASHGGQVSLIDVVDDGIAVLKFGGGCQGCGQADVTLREG 165
Query: 172 VANILNHFVPEVKDIRTV 189
+ L +PE+K +R V
Sbjct: 166 IERTLLERIPELKGVRDV 183
>gi|15612450|ref|NP_224103.1| NifU-like protein [Helicobacter pylori J99]
gi|15646101|ref|NP_208283.1| NifU-like protein [Helicobacter pylori 26695]
gi|207092454|ref|ZP_03240241.1| NifU-like protein [Helicobacter pylori HPKX_438_AG0C1]
gi|208435360|ref|YP_002267026.1| conserved hypothetical nifU-like protein [Helicobacter pylori G27]
gi|210135659|ref|YP_002302098.1| nifu-like protein [Helicobacter pylori P12]
gi|217031837|ref|ZP_03437340.1| hypothetical protein HPB128_199g45 [Helicobacter pylori B128]
gi|254780002|ref|YP_003058109.1| putative nifU-like protein [Helicobacter pylori B38]
gi|298735538|ref|YP_003728059.1| thioredoxin-like protein [Helicobacter pylori B8]
gi|308185262|ref|YP_003929395.1| putative nifU-like protein [Helicobacter pylori SJM180]
gi|2314672|gb|AAD08534.1| conserved hypothetical nifU-like protein [Helicobacter pylori
26695]
gi|4156005|gb|AAD06966.1| putative [Helicobacter pylori J99]
gi|208433289|gb|ACI28160.1| conserved hypothetical nifU-like protein [Helicobacter pylori G27]
gi|210133627|gb|ACJ08618.1| nifu-like protein [Helicobacter pylori P12]
gi|216946489|gb|EEC25091.1| hypothetical protein HPB128_199g45 [Helicobacter pylori B128]
gi|254001915|emb|CAX30168.1| Putative nifU-like protein [Helicobacter pylori B38]
gi|298354723|emb|CBI65595.1| thioredoxin-like protein [Helicobacter pylori B8]
gi|307638148|gb|ADN80598.1| NifU like protein [Helicobacter pylori 908]
gi|308061182|gb|ADO03078.1| putative nifU-like protein [Helicobacter pylori SJM180]
gi|317010134|gb|ADU80714.1| putative nifU-like protein [Helicobacter pylori India7]
gi|317011627|gb|ADU85374.1| putative nifU-like protein [Helicobacter pylori SouthAfrica7]
gi|317013262|gb|ADU83870.1| putative nifU-like protein [Helicobacter pylori Lithuania75]
gi|317014907|gb|ADU82343.1| putative nifU-like protein [Helicobacter pylori Gambia94/24]
gi|325996747|gb|ADZ52152.1| NifU like protein [Helicobacter pylori 2018]
gi|325998342|gb|ADZ50550.1| NifU like protein [Helicobacter pylori 2017]
Length = 89
Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD + + ++ V++ ++RP + +DGG+I G + +++++ GAC C S+ TL
Sbjct: 1 MIEFSDEDLQKPVRIVIE-KIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
K + L + P ++ +
Sbjct: 60 KNVIERQLKMDIHPNLEVV 78
>gi|261840168|gb|ACX99933.1| NifU-like protein [Helicobacter pylori 52]
gi|317182697|dbj|BAJ60481.1| conserved hypothetical nifU-like protein [Helicobacter pylori F57]
Length = 89
Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD + + ++ V++ ++RP + +DGG+I G + +++++ GAC C S+ TL
Sbjct: 1 MIEFSDEDLQKPVRIVIE-KIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
K + L + P ++ +
Sbjct: 60 KNVIERQLKMDIHPNLEVV 78
>gi|330503471|ref|YP_004380340.1| HesB/YadR/YfhF family protein [Pseudomonas mendocina NK-01]
gi|328917757|gb|AEB58588.1| HesB/YadR/YfhF-family protein [Pseudomonas mendocina NK-01]
Length = 194
Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETL 168
+ DS + +RI L + P +A GG + +GI L G C GC A TL
Sbjct: 103 MVNEDSPLNERINYYLQTEINPGLASHGGQVSLVDVVDEGIAVLQFGGGCQGCGQADYTL 162
Query: 169 KYGVANILNHFVPEVKDIRTV 189
K G+ L +PE+K +R V
Sbjct: 163 KEGIEKTLLERIPELKGVRDV 183
>gi|217033876|ref|ZP_03439300.1| hypothetical protein HP9810_870g8 [Helicobacter pylori 98-10]
gi|216943639|gb|EEC23084.1| hypothetical protein HP9810_870g8 [Helicobacter pylori 98-10]
gi|315585879|gb|ADU40260.1| NifU family protein [Helicobacter pylori 35A]
gi|317178197|dbj|BAJ55986.1| conserved hypothetical nifU-like protein [Helicobacter pylori F16]
gi|317179669|dbj|BAJ57457.1| conserved hypothetical nifU-like protein [Helicobacter pylori F30]
Length = 89
Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD + + ++ V++ ++RP + +DGG+I G + +++++ GAC C S+ TL
Sbjct: 1 MIEFSDEDLQKPVRVVIE-KIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
K + L + P ++ +
Sbjct: 60 KNVIERQLKMDIHPNLEVV 78
>gi|261838766|gb|ACX98532.1| nifU-like protein [Helicobacter pylori 51]
Length = 89
Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD + + ++ V++ ++RP + +DGG+I G + +++++ GAC C S+ TL
Sbjct: 1 MIEFSDEDLQKPVRVVIE-KIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
K + L + P ++ +
Sbjct: 60 KNIIERQLKMDIHPNLEVV 78
>gi|296272416|ref|YP_003655047.1| nitrogen-fixing NifU domain-containing protein [Arcobacter
nitrofigilis DSM 7299]
gi|296096590|gb|ADG92540.1| nitrogen-fixing NifU domain protein [Arcobacter nitrofigilis DSM
7299]
Length = 326
Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 99 DMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI----VF 151
D +G +VQRIK EVLD +RP +A DGG++ ++ ++
Sbjct: 229 KQAADASAAGQSSFDKMTIVQRIKLIDEVLDGEIRPMLAMDGGNMEIIDIKENTPHYDIY 288
Query: 152 LSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+ GAC+GC S Y + ++L V E + +
Sbjct: 289 IRYLGACNGCASGDTGTLYAIESVLKQKVDENIRVLPI 326
>gi|188528263|ref|YP_001910950.1| conserved hypothetical nifU-like protein [Helicobacter pylori
Shi470]
gi|308183595|ref|YP_003927722.1| conserved hypothetical nifU-like protein [Helicobacter pylori
PeCan4]
gi|188144503|gb|ACD48920.1| conserved hypothetical nifU-like protein [Helicobacter pylori
Shi470]
gi|297380653|gb|ADI35540.1| Hypothetical protein HPV225_1523 [Helicobacter pylori v225d]
gi|308062756|gb|ADO04644.1| conserved hypothetical nifU-like protein [Helicobacter pylori
Cuz20]
gi|308064252|gb|ADO06139.1| conserved hypothetical nifU-like protein [Helicobacter pylori
Sat464]
gi|308065780|gb|ADO07672.1| conserved hypothetical nifU-like protein [Helicobacter pylori
PeCan4]
gi|317181175|dbj|BAJ58961.1| conserved hypothetical nifU-like protein [Helicobacter pylori F32]
Length = 89
Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD + + ++ V++ ++RP + +DGG+I G + +++++ GAC C S+ TL
Sbjct: 1 MIEFSDEDLQKPVRIVIE-KIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
K + L + P ++ +
Sbjct: 60 KNVIERQLKTDIHPNLEVV 78
>gi|226942327|ref|YP_002797400.1| nitrogen fixation Fe-S cluster scaffold protein [Azotobacter
vinelandii DJ]
gi|128318|sp|P05340|NIFU_AZOVI RecName: Full=Nitrogen fixation protein nifU
gi|142360|gb|AAA64725.1| nifU protein [Azotobacter vinelandii]
gi|226717254|gb|ACO76425.1| Nitrogen fixation Fe-S cluster scaffold protein [Azotobacter
vinelandii DJ]
Length = 312
Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
S+ ++RI+ VL +RP + RD GD+ V++ + GAC+GC AS TL G+
Sbjct: 228 SNLQRIRRIETVL-AAIRPTLQRDKGDVELIDVDGKNVYVKLTGACTGCQMASMTL-GGI 285
Query: 173 ANILNHFVPEVKDIRTV 189
L + E + V
Sbjct: 286 QQRLIEELGEFVKVIPV 302
>gi|225619753|ref|YP_002721010.1| NifU-like N terminal domain-containing protein [Brachyspira
hyodysenteriae WA1]
gi|225214572|gb|ACN83306.1| NifU N, NifU-like N terminal domain protein [Brachyspira
hyodysenteriae WA1]
Length = 277
Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Query: 92 IHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVF 151
I + ++ + + + + +++I+E L+ + P + DGG V
Sbjct: 180 IEDILNEELADMEREAKNAPMTTVQKIKKIEEALERVINPMLKMDGGSCRLVDVDGNKVM 239
Query: 152 LSMRGACSGCPSASETLKYGVANILNHFVP---EVKDI 186
+ +GACS C S+ TLK V L V EV +
Sbjct: 240 IEFKGACSACASSKNTLKGFVEPKLQELVSKDLEVVGV 277
>gi|226306139|ref|YP_002766099.1| hypothetical protein RER_26520 [Rhodococcus erythropolis PR4]
gi|226185256|dbj|BAH33360.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length = 300
Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 6/128 (4%)
Query: 62 TVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD---FIESDSAVV 118
V +D+ + L V+ + + + M DD+ S V
Sbjct: 27 PVARDRAE--QLVREVVQLYGAALERTVALADPAMMDAMVRDDLVSSLLLVHGLHPHDVE 84
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
R++ LD+ VRP + GGD+ DG+V L + G+C+ CPS+S TL+ V + +
Sbjct: 85 TRVRTALDS-VRPYLGSHGGDVELIEVADGVVRLRLLGSCNSCPSSSVTLETAVQDAVQA 143
Query: 179 FVPEVKDI 186
PE I
Sbjct: 144 AAPETTGI 151
>gi|257095889|ref|YP_003169530.1| Fe-S cluster assembly protein NifU [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048413|gb|ACV37601.1| Fe-S cluster assembly protein NifU [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 294
Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 71 EHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVR 130
E + V G + + P+ G++ G ++ ++RI+E L+ +R
Sbjct: 180 EDILIAVNGRL--YANEAKPVKARPAAGEVP------GKPKLTNYQRIRRIEETLE-AIR 230
Query: 131 PAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
P++ RD GD+ +++ + GAC GC + TL GV L + E+ + V
Sbjct: 231 PSLQRDHGDVTLVEVDGKKIYVELTGACRGCSMEAATL-GGVQQKLIEALGELVQVLPV 288
>gi|108563846|ref|YP_628162.1| NifU-like protein [Helicobacter pylori HPAG1]
gi|107837619|gb|ABF85488.1| conserved hypothetical nifU-like protein [Helicobacter pylori
HPAG1]
Length = 89
Score = 75.6 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD + + ++ V++ ++RP + +DGG+I G + +++++ GAC C S+ TL
Sbjct: 1 MIEFSDEDLQKPVRIVIE-KIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
K + L + P ++ +
Sbjct: 60 KNVIERQLKMDIHPNLEVV 78
>gi|229490939|ref|ZP_04384774.1| nitrogen-fixing NifU domain protein [Rhodococcus erythropolis
SK121]
gi|229322329|gb|EEN88115.1| nitrogen-fixing NifU domain protein [Rhodococcus erythropolis
SK121]
Length = 300
Score = 75.2 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 6/128 (4%)
Query: 62 TVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD---FIESDSAVV 118
V +D+ + L V+ + + + M DD+ S V
Sbjct: 27 PVARDRAE--QLVREVVQLYGAALERTVALADPATMDAMVRDDLVSSLLLVHGLHPHDVE 84
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
R++ LD+ VRP + GGD+ DG+V L + G+C+ CPS+S TL+ V + +
Sbjct: 85 TRVRTALDS-VRPYLGSHGGDVELIEVADGVVRLRLLGSCNSCPSSSVTLETAVQDAVQA 143
Query: 179 FVPEVKDI 186
PE I
Sbjct: 144 AAPETTGI 151
>gi|224001364|ref|XP_002290354.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973776|gb|EED92106.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 69
Score = 75.2 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 129 VRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANILNHFVPE-VKD 185
VRP + DGG++ + G V+L + GAC C S++ T+K G+ +L + + +
Sbjct: 1 VRPYLISDGGNVSVQNVDAGTGNVYLLLEGACGSCASSTVTMKMGIERVLKEKFEDKLGE 60
Query: 186 IRTV 189
+ V
Sbjct: 61 VIQV 64
>gi|295098862|emb|CBK87951.1| Thioredoxin-like proteins and domains [Eubacterium cylindroides
T2-87]
Length = 83
Score = 75.2 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILNH 178
E +++RP + DGGDI G + V+++ RGAC+GC A+E G+ +L
Sbjct: 12 MAVEACLDKIRPYIQHDGGDIELLGIDEHAYVYVAFRGACAGCMMATEDFSSGIKLLLMD 71
Query: 179 FVPEVKDIRTV 189
VP ++D+ V
Sbjct: 72 EVPGIRDVILV 82
>gi|332674262|gb|AEE71079.1| NifU family protein [Helicobacter pylori 83]
Length = 89
Score = 75.2 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD + + ++ V++ ++RP + +DGG+I G + +++++ GAC C S+ TL
Sbjct: 1 MIEFSDEDLQKPVRVVIE-KIRPYLLKDGGNIEVLGVKSMKIYVTLEGACKTCSSSKITL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
K + L + P ++ +
Sbjct: 60 KNVIERQLKMDIHPNLEVV 78
>gi|302343333|ref|YP_003807862.1| nitrogen-fixing NifU domain protein [Desulfarculus baarsii DSM
2075]
gi|301639946|gb|ADK85268.1| nitrogen-fixing NifU domain protein [Desulfarculus baarsii DSM
2075]
Length = 78
Score = 75.2 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGV 172
D+ +++ L +A+ G++ +G+V + + GACSGC SA TL+ +
Sbjct: 2 DALTKDMVEQALQEARAE-LAKHHGNVEVLAVNQEGVVLVRLTGACSGCKSAPLTLRDVI 60
Query: 173 ANILNHFVPEVKDIRT 188
L +P+V +
Sbjct: 61 EKSLKARLPQVTRVDA 76
>gi|146282569|ref|YP_001172722.1| yhgI protein [Pseudomonas stutzeri A1501]
gi|254767315|sp|A4VLM9|NFUA_PSEU5 RecName: Full=Fe/S biogenesis protein nfuA
gi|145570774|gb|ABP79880.1| yhgI protein [Pseudomonas stutzeri A1501]
gi|327480826|gb|AEA84136.1| yhgI protein [Pseudomonas stutzeri DSM 4166]
Length = 194
Score = 74.8 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 47/129 (36%), Gaps = 10/129 (7%)
Query: 71 EHLRPPVLGMIMEHFISGDPIIHNG---------GLGDMKLDDMGSGDFIESDSAVVQRI 121
+ + + + +P + + G + DS + +RI
Sbjct: 55 DDIALALKSFTAWIDGTSEPFLEDALVDYATDRMGGQLTIKAPNAKVPMVNEDSPMNERI 114
Query: 122 KEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
L + P +A GG + +GI L G C GC A TLK G+ L +
Sbjct: 115 NYYLQTEINPGLASHGGQVTLIDVVEEGIAVLQFGGGCQGCGQADVTLKEGIEKTLLARI 174
Query: 181 PEVKDIRTV 189
PE+K +R V
Sbjct: 175 PELKGVRDV 183
>gi|297583815|ref|YP_003699595.1| Scaffold protein Nfu/NifU [Bacillus selenitireducens MLS10]
gi|297142272|gb|ADH99029.1| Scaffold protein Nfu/NifU [Bacillus selenitireducens MLS10]
Length = 89
Score = 74.8 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 1 MFIQT--EDTPNPATLKFIPGQVVLV-EGAIHFSNAKEAEISPLASRIFSIPGIASVYFG 57
M I+ E TPNP +KF QV+ G+ F +E + + LA + S+ G+ +++
Sbjct: 1 MAIEVRGEPTPNPNAMKFTANQVLFEGSGSASFKKGQETDHA-LAKELLSLDGVDNIFGF 59
Query: 58 YDFITVGKD-QYDWEHLRPPVLG 79
DF+TV K+ +W+ L P +
Sbjct: 60 QDFVTVNKEPGAEWDDLLPKIQE 82
>gi|291613274|ref|YP_003523431.1| Fe-S cluster assembly protein NifU [Sideroxydans lithotrophicus
ES-1]
gi|291583386|gb|ADE11044.1| Fe-S cluster assembly protein NifU [Sideroxydans lithotrophicus
ES-1]
Length = 296
Score = 74.8 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 15/117 (12%)
Query: 71 EHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVR 130
E + V+ E+F G P M ++ +++I+ VL++ +R
Sbjct: 180 EEILVKVMAERGENFKPGTPAKEEAAPAGM------------TNLQRIRKIETVLES-IR 226
Query: 131 PAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE-VKDI 186
P + RDGGDI ++++M+GACSGC + TL G+ L + E +K +
Sbjct: 227 PQLKRDGGDIELVDVDGKTIYVNMKGACSGCQMEALTL-QGIQQKLMEELKEFIKIV 282
>gi|118580432|ref|YP_901682.1| Fe-S cluster assembly protein NifU [Pelobacter propionicus DSM
2379]
gi|118503142|gb|ABK99624.1| Fe-S cluster assembly protein NifU [Pelobacter propionicus DSM
2379]
Length = 290
Score = 74.8 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q I+EVL+ +RP + DGGD+ V ++ R AC+GC S+ T + V + L
Sbjct: 218 MQMIQEVLERDIRPLLWADGGDLELIDIDGPKVQVAFRKACAGCASSGNTARM-VEHKLR 276
Query: 178 HFVPEVKDIRTV 189
V E + V
Sbjct: 277 DLVAEDIVVEEV 288
>gi|148263889|ref|YP_001230595.1| Fe-S cluster assembly protein NifU [Geobacter uraniireducens Rf4]
gi|146397389|gb|ABQ26022.1| Fe-S cluster assembly protein NifU [Geobacter uraniireducens Rf4]
Length = 286
Score = 74.4 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 14/115 (12%)
Query: 75 PPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVA 134
P + +I E ++ + K + + +Q I+E L+N VRP +
Sbjct: 184 PRIKELIAE-------VMGEQKREEQKKPEKLTNLRK------MQLIQETLENEVRPQLW 230
Query: 135 RDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
DGGD+ G V ++ R AC+GC S+ T K V L V + + V
Sbjct: 231 ADGGDLELIDIDGGKVQIAFRKACAGCASSGFTAK-FVEQKLRDLVSDDITVEEV 284
>gi|188997215|ref|YP_001931466.1| nitrogen-fixing NifU domain protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932282|gb|ACD66912.1| nitrogen-fixing NifU domain protein [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 84
Score = 74.4 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
Q ++E+LD +VRPA+ D G+I + VFL + G C CP A T+K V +
Sbjct: 8 QEVREILD-KVRPALLADAGNIELVKVENDEVFLKLYGTCQTCPVADMTMKDLVIYTIKE 66
Query: 179 FVPEVKDI 186
+P VK +
Sbjct: 67 SLPWVKAV 74
>gi|85858912|ref|YP_461114.1| iscU protein [Syntrophus aciditrophicus SB]
gi|85722003|gb|ABC76946.1| iscU protein [Syntrophus aciditrophicus SB]
Length = 274
Score = 74.4 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ ++ I++VL+ +RP++ DGGD+ V ++ RGAC+ C ++ +TLK V
Sbjct: 196 TNIQKIRMIEDVLEKEIRPSLKNDGGDVELIDVVGNRVLVATRGACAVCRASQQTLKGFV 255
Query: 173 ANILNHFV-PE--VKDIRT 188
L V PE V++++
Sbjct: 256 EFKLRELVTPELIVEEVKA 274
>gi|218282608|ref|ZP_03488846.1| hypothetical protein EUBIFOR_01432 [Eubacterium biforme DSM 3989]
gi|218216479|gb|EEC90017.1| hypothetical protein EUBIFOR_01432 [Eubacterium biforme DSM 3989]
Length = 79
Score = 74.4 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVANILN 177
+ + + LD ++RP + DGGDI G + +V++S +GAC GC ASE G+ +L
Sbjct: 8 KAVNDCLD-KIRPYIQHDGGDIELLGVDEFNVVYVSFKGACQGCMMASEDFSSGIKELLL 66
Query: 178 HFVPEVKDIRTV 189
VP ++D+ V
Sbjct: 67 EEVPNIRDVVLV 78
>gi|128317|sp|P23121|NIFU_AZOCH RecName: Full=Nitrogen fixation protein nifU
gi|142387|gb|AAA22159.1| nifU [Azotobacter chroococcum]
Length = 309
Score = 74.4 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
S+ ++RI+ VL +RP + RD GD+ +++ + GAC+GC AS TL G+
Sbjct: 226 SNLQRIRRIETVL-AAIRPTLQRDKGDVELIDVDGKNIYVKLTGACTGCQMASMTL-GGI 283
Query: 173 ANILNHFVPEVKDIRTV 189
L + E + V
Sbjct: 284 QQRLIEELGEFVKVIPV 300
>gi|271965282|ref|YP_003339478.1| hypothetical protein Sros_3815 [Streptosporangium roseum DSM 43021]
gi|270508457|gb|ACZ86735.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
Length = 186
Score = 74.1 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 11/133 (8%)
Query: 62 TVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGD----MKLDDMGSGDFIESDS-- 115
V + + + L ++ + I+ + + + DD+ SG + D
Sbjct: 27 PVTRAKAE--ELVRVLVELYGSGLERVVEIVTDAEAAEVLHRLATDDLVSGLLVLHDLHP 84
Query: 116 -AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVA 173
+ +R++ LD VRP + G + G + G+V L ++G C GCPS+ + V
Sbjct: 85 LSTAERVRAALD-AVRPQLGLHEGGVELLGVDETGVVRLRLQGTCRGCPSSQLAVTSAVE 143
Query: 174 NILNHFVPEVKDI 186
+ PEV +
Sbjct: 144 RAVLQAAPEVSGV 156
>gi|225850623|ref|YP_002730857.1| hypothetical protein PERMA_1071 [Persephonella marina EX-H1]
gi|225646187|gb|ACO04373.1| conserved domain protein [Persephonella marina EX-H1]
Length = 89
Score = 74.1 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
+E Q ++EVL N++RPA+A D G+I + V+L + GACS CP T+
Sbjct: 1 MVEDLKTKEQEVEEVL-NKIRPALALDQGNIKLIKVENNDVYLELLGACSTCPVPDITMN 59
Query: 170 YGVANILNHFVPEVKDI 186
+ + H +P V+ +
Sbjct: 60 DVIITTIKHLLPWVETV 76
>gi|94986710|ref|YP_594643.1| NifU homolog involved in Fe-S cluster formation [Lawsonia
intracellularis PHE/MN1-00]
gi|94730959|emb|CAJ54322.1| NifU homolog involved in Fe-S cluster formation [Lawsonia
intracellularis PHE/MN1-00]
Length = 280
Score = 74.1 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ +Q+I +LD + P + DGG + +V ++MRG C+GC S TL +
Sbjct: 202 TNVQRMQKILHLLDEEINPVLKTDGGSVELIDVNGPLVTVAMRGNCTGCKSRQITLSQFI 261
Query: 173 ANILNHFVPEVKDIRTV 189
IL+ V + V
Sbjct: 262 EKILHEHVDSDIIVEEV 278
>gi|109948219|ref|YP_665447.1| hypothetical protein Hac_1752 [Helicobacter acinonychis str.
Sheeba]
gi|109715440|emb|CAK00448.1| conserved hypothetical protein [Helicobacter acinonychis str.
Sheeba]
Length = 89
Score = 74.1 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD + + + ++ ++RP + +DGG+I G + +++++ GAC C S+ TL
Sbjct: 1 MIEFSDEDLQKPVHIAIE-KIRPYLLKDGGNIEVLGIKSMKIYVTLEGACKTCSSSKITL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
K + L + P ++ +
Sbjct: 60 KNVIERQLKMDIHPNLEVV 78
>gi|187250848|ref|YP_001875330.1| Fe-S cluster assembly protein NifU [Elusimicrobium minutum Pei191]
gi|186971008|gb|ACC97993.1| Fe-S cluster assembly protein NifU [Elusimicrobium minutum Pei191]
Length = 284
Score = 74.1 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Query: 89 DPIIHNGGLGDMKLDDMGSGDFIESDSAV--VQRIKEVLDNRVRPAVARDGGDIVFKGYR 146
II ++ + E+ S V V+ ++ VL+ VRP + DGG +
Sbjct: 182 QKIIDKVYSCEVSEPEEQQPVVFENMSIVAKVKAVEAVLEKDVRPKLNMDGGSVELVDIE 241
Query: 147 DGIVFLSMRGACSGCPSASETLKYGVANILNHFV-PEVK 184
V + + GAC GC A T+K + + L + P +
Sbjct: 242 GTNVKVKLLGACRGCMGAQGTIKMIIESALKDKISPNIT 280
>gi|27904960|ref|NP_778086.1| YhgI [Buchnera aphidicola str. Bp (Baizongia pistaciae)]
gi|38372572|sp|Q89A55|NFUA_BUCBP RecName: Full=Fe/S biogenesis protein nfuA
gi|27904358|gb|AAO27191.1| YhgI [Buchnera aphidicola str. Bp (Baizongia pistaciae)]
Length = 191
Score = 74.1 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 59/171 (34%), Gaps = 13/171 (7%)
Query: 30 FSNAKEAEISPLASRIF-SIPGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISG 88
F N + + R++ PG G + KD + + I+ +
Sbjct: 12 FLNLLKKQKYGTNIRVYVKYPGTPVAKCGVSYCY--KDDVTRLDVAFTMNKFIVYVYKPH 69
Query: 89 DPIIHNGGLGDMKLD---------DMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGD 139
P + + + + + ++ + +R++ L+ + P ++ GG
Sbjct: 70 IPYLRESKIDINVEECNSQLTLIAPYANKCYFIKNNDLKRRVENFLNLNINPQLSAHGGK 129
Query: 140 IVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+ G + L G C+GC +TLK G+ + E K + +
Sbjct: 130 VDLMNITESGYLSLKFSGGCNGCSMVQKTLKEGIEKQILAKFSEFKGVYDI 180
>gi|237752011|ref|ZP_04582491.1| predicted protein [Helicobacter winghamensis ATCC BAA-430]
gi|229376578|gb|EEO26669.1| predicted protein [Helicobacter winghamensis ATCC BAA-430]
Length = 326
Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIKEV---LDNRVRPAVARDGGDIVFKGYRDG-- 148
K D GD ++ +VQ+IK + +D ++RP + DGG++ ++G
Sbjct: 223 EEESLREKADAQSQGDLKFTEMTMVQKIKAIENTIDEKIRPMLMMDGGNMEIIDLKNGSD 282
Query: 149 ---IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
V++ GACSGC S++ + + ++L + + V
Sbjct: 283 GYTDVYIRYLGACSGCASSATGTLFAIESVLQESLDSSIRVFPV 326
>gi|317129652|ref|YP_004095934.1| Scaffold protein Nfu/NifU [Bacillus cellulosilyticus DSM 2522]
gi|315474600|gb|ADU31203.1| Scaffold protein Nfu/NifU [Bacillus cellulosilyticus DSM 2522]
Length = 87
Score = 73.7 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLV-EGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
++ E TPNP +KF +V+ G+ F + + LA + I G+ +++ DF+
Sbjct: 5 VRAEPTPNPNAMKFTATEVLFEGSGSASFKKGDSPDHA-LAKALLEIDGVDNIFGYQDFV 63
Query: 62 TVGKD-QYDWEHLRPPVLGM 80
TV K+ +W+ L P +
Sbjct: 64 TVNKEADVEWDALLPKIEEA 83
>gi|197117955|ref|YP_002138382.1| nitrogen fixation iron-sulfur cluster assembly protein NifU
[Geobacter bemidjiensis Bem]
gi|197087315|gb|ACH38586.1| nitrogen fixation iron-sulfur cluster assembly protein NifU
[Geobacter bemidjiensis Bem]
Length = 284
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q I+E L+N +RP + DGGD+ V ++ R AC+GC S+ T K V L
Sbjct: 212 MQLIQETLENEIRPQLWADGGDLELIDIDGANVQVAFRKACAGCASSGNTAK-FVEQKLR 270
Query: 178 HFV-PEVKDIRTV 189
V P++ ++ V
Sbjct: 271 EMVSPDIT-VQEV 282
>gi|189424665|ref|YP_001951842.1| Fe-S cluster assembly protein NifU [Geobacter lovleyi SZ]
gi|189420924|gb|ACD95322.1| Fe-S cluster assembly protein NifU [Geobacter lovleyi SZ]
Length = 288
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 16/115 (13%)
Query: 75 PPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVA 134
P + +I E L ++K +Q ++EVL+ +RP +
Sbjct: 188 PKIKELIAEVLGQAKEAAAKPKLSNLKK---------------MQLVQEVLERDIRPMLR 232
Query: 135 RDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
DGGD+ V ++ R AC+GC S+ T K V L V E ++ V
Sbjct: 233 ADGGDLELIDIDGDHVQIAFRKACAGCASSGNTAK-FVEMKLRELVYEGLHVQEV 286
>gi|119716242|ref|YP_923207.1| NifU domain-containing protein [Nocardioides sp. JS614]
gi|119536903|gb|ABL81520.1| nitrogen-fixing NifU domain protein [Nocardioides sp. JS614]
Length = 181
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 36/83 (43%)
Query: 106 GSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSAS 165
D +++ + +L V V GG I RDG+V + +RGAC GCP+++
Sbjct: 98 TEAGDAPDDRDLIEAVHRLLAGDVGDYVRSHGGAIELVDVRDGVVGVRLRGACHGCPASA 157
Query: 166 ETLKYGVANILNHFVPEVKDIRT 188
TL+ L P + +
Sbjct: 158 FTLRARFERRLRAECPGLVAVEA 180
>gi|253701253|ref|YP_003022442.1| Fe-S cluster assembly protein NifU [Geobacter sp. M21]
gi|251776103|gb|ACT18684.1| Fe-S cluster assembly protein NifU [Geobacter sp. M21]
Length = 284
Score = 73.3 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q I+E L+N +RP + DGGD+ V ++ R AC+GC S+ T K V L
Sbjct: 212 MQLIQETLENEIRPQLWADGGDLELIDIDGANVQVAFRKACAGCASSGNTAK-FVEQKLR 270
Query: 178 HFV-PEVKDIRTV 189
V P++ ++ V
Sbjct: 271 EMVSPDIT-VQEV 282
>gi|124023793|ref|YP_001018100.1| hypothetical protein P9303_21001 [Prochlorococcus marinus str. MIT
9303]
gi|123964079|gb|ABM78835.1| Hypothetical protein P9303_21001 [Prochlorococcus marinus str. MIT
9303]
Length = 42
Score = 73.3 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 150 VFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
V + ++GAC CPS++ TLK G+ L +PEV ++
Sbjct: 2 VKVCLQGACCSCPSSTMTLKMGIERKLREIIPEVSEVVQ 40
>gi|268317455|ref|YP_003291174.1| Scaffold protein Nfu/NifU [Rhodothermus marinus DSM 4252]
gi|262334989|gb|ACY48786.1| Scaffold protein Nfu/NifU [Rhodothermus marinus DSM 4252]
Length = 102
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 3 IQTEDTPNPATLKFI-PGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
+Q+ TPNP +LKF PGQ + +G + F +A+ A PLA+ +F+I G+ V +F+
Sbjct: 12 LQSHPTPNPNSLKFTAPGQTFIDKGLLSFRSAEAAAAHPLAAALFAIEGVCDVLILPEFV 71
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFIS 87
TV K WE + PV+ + +
Sbjct: 72 TVTKRPDVPWEAIEAPVMEALRAYLAE 98
>gi|118468815|ref|YP_887052.1| iron-sulfur cluster-binding protein, Rieske family protein
[Mycobacterium smegmatis str. MC2 155]
gi|118170102|gb|ABK70998.1| iron-sulfur cluster-binding protein, Rieske family protein,
putative [Mycobacterium smegmatis str. MC2 155]
Length = 307
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGY----RDGIVFLSMRGACSGCPSASETLKYG 171
V +RI + LD RVRP + GGD+ + L G+C CPS++ TL+
Sbjct: 98 PVHRRIADALD-RVRPYLGSHGGDVRLLDVVPEADGAVARLRFSGSCKSCPSSAATLELA 156
Query: 172 VANILNHFVPEVKDIRTV 189
+++ + PEV I V
Sbjct: 157 ISDAVLAAAPEVSSIEVV 174
>gi|220904348|ref|YP_002479660.1| Fe-S cluster assembly protein NifU [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868647|gb|ACL48982.1| Fe-S cluster assembly protein NifU [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 278
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ +Q + + ++ +RP +A DGGDI V +S+RG CS C ++ T++ V
Sbjct: 202 TNVQRMQLVLKTIEEEIRPVLAADGGDIELVDVDGLRVVVSLRGRCSQCRASDVTIRDLV 261
Query: 173 ANILNHFV-PEV 183
+L V P++
Sbjct: 262 QRLLREHVEPDI 273
>gi|32491050|ref|NP_871304.1| hypothetical protein WGLp301 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166257|dbj|BAC24447.1| yhgI [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 207
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYGVANI 175
+ RI + ++ + GG + ++ + V L G C+GC A TLK G+
Sbjct: 123 LKNRISNFIKYKINSKLEYHGGFVELIDIKENMFVILKFFGGCNGCSMAKVTLKEGIEKE 182
Query: 176 LNHFVPEVKDIRTV 189
+ P +K + +
Sbjct: 183 IKKNFPNIKGVIDI 196
>gi|225849266|ref|YP_002729430.1| hypothetical protein SULAZ_1463 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643887|gb|ACN98937.1| conserved domain protein [Sulfurihydrogenibium azorense Az-Fu1]
Length = 84
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
Q +KEVL+ ++RPA+ D G I + VFL + G C CP A T+K V
Sbjct: 4 EDKEQEVKEVLE-KIRPALMADAGKIDLVKIENDEVFLKLYGTCQTCPVADMTMKDLVVY 62
Query: 175 ILNHFVPEVKDI 186
+ +P VK +
Sbjct: 63 TIKESLPWVKAV 74
>gi|51702010|sp|Q8D2Q3|NFUA_WIGBR RecName: Full=Fe/S biogenesis protein nfuA
Length = 184
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-VFLSMRGACSGCPSASETLKYGVANI 175
+ RI + ++ + GG + ++ + V L G C+GC A TLK G+
Sbjct: 100 LKNRISNFIKYKINSKLEYHGGFVELIDIKENMFVILKFFGGCNGCSMAKVTLKEGIEKE 159
Query: 176 LNHFVPEVKDIRTV 189
+ P +K + +
Sbjct: 160 IKKNFPNIKGVIDI 173
>gi|195361607|ref|XP_002045503.1| GM19271 [Drosophila sechellia]
gi|194128907|gb|EDW50950.1| GM19271 [Drosophila sechellia]
Length = 110
Score = 72.1 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/44 (54%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEG-AIHFSNAKEAEISPLAS 43
MFIQT+DTPNP +LKF+PG VL +G F N A SPL
Sbjct: 67 MFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHSSPLGE 110
>gi|148645196|gb|ABR01122.1| NifU [uncultured Geobacter sp.]
gi|148645198|gb|ABR01123.1| NifU [uncultured Geobacter sp.]
Length = 44
Score = 71.7 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 138 GDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
GD+ DG+V + + GAC CP ++ TLK G+ L V
Sbjct: 1 GDVELVEVTADGVVKVKLVGACGHCPMSTMTLKMGIEKTLKEKV 44
>gi|325114501|emb|CBZ50057.1| at4g25910 protein, related [Neospora caninum Liverpool]
Length = 285
Score = 71.7 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++VL++ VRP + GG++ + I L+ +GACSGCPSA +TL G+ L
Sbjct: 63 MVEQVLES-VRPYLRSHGGNVKLVELDSENRIARLAFKGACSGCPSAQQTLYEGLQGALR 121
Query: 178 HFVPEVKDIRT 188
P+++ +
Sbjct: 122 EVWPDIR-VEE 131
>gi|237756604|ref|ZP_04585121.1| conserved domain protein [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691235|gb|EEP60326.1| conserved domain protein [Sulfurihydrogenibium yellowstonense SS-5]
Length = 73
Score = 71.7 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
Q ++E+LD +VRPA+ D G+I + VFL + G C CP A T+K V +
Sbjct: 8 QEVREILD-KVRPALLADAGNIELVKVENDEVFLKLYGTCQTCPVADMTMKDLVIYTIKE 66
Query: 179 FVPEVK 184
+P VK
Sbjct: 67 SLPWVK 72
>gi|332673064|gb|AEE69881.1| NifU family protein [Helicobacter pylori 83]
Length = 326
Score = 71.0 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
D SG+ + +VQ+IK +V+D +RP + DGGD+ ++
Sbjct: 224 EAEKLKATADKSQSGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|330443916|ref|YP_004376902.1| NifU-like protein [Chlamydophila pecorum E58]
gi|328807026|gb|AEB41199.1| NifU-like protein [Chlamydophila pecorum E58]
Length = 275
Score = 71.0 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 90 PIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI 149
P + IE+ AV++ I E ++ P +A DGG + K + I
Sbjct: 161 PEFPEMEDANPYDKHTWEAMSIENKIAVLRTITE---EKISPYIALDGGAVSIKTLENNI 217
Query: 150 VFLSMRGACSGCPSASETLKYGVANILNHFV-PEVK 184
V ++ G CSGCPS+ T + +L +V PE++
Sbjct: 218 VTIAYSGNCSGCPSSIGTTLNSIGQLLRTYVYPELQ 253
>gi|120434575|ref|YP_860268.1| NifU-like/thioredoxin-like protein [Gramella forsetii KT0803]
gi|117576725|emb|CAL65194.1| protein containing NifU-like domain / thioredoxin-like protein
[Gramella forsetii KT0803]
Length = 54
Score = 71.0 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 146 RDGIVFLSMRGACSGCPSASETLKYGVANILNHFV-PEVKDIRTV 189
+ V + ++GACSGCPS++ TLK G+ +L + +V+ + V
Sbjct: 8 ENKTVKVILQGACSGCPSSTMTLKSGIETMLRDMLRDKVEYVEAV 52
>gi|323143850|ref|ZP_08078516.1| putative IscR-regulated protein YhgI [Succinatimonas hippei YIT
12066]
gi|322416368|gb|EFY07036.1| putative IscR-regulated protein YhgI [Succinatimonas hippei YIT
12066]
Length = 196
Score = 71.0 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 14/152 (9%)
Query: 50 GIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSG- 108
G V G + + EH + ++++ S P + + K DD
Sbjct: 36 GTPGVECGILYCPKEYITMNDEHFKMDGFEIVID--SSVSPYLDESVIDLSKDDDGNDLL 93
Query: 109 ---------DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGAC 158
+ D+ + R+K + V PA+A GG + DG+V + G C
Sbjct: 94 TFHAPNLKKQDLPEDATLFDRVKRFFETTVNPALAGHGGAAALEEVTEDGVVKVRFSGGC 153
Query: 159 SGCPSASETLKYGVANILNHFVPE-VKDIRTV 189
+GC TLK G+ + LN P +KD+ V
Sbjct: 154 NGCSMVGITLKEGIQSQLNQAFPGMIKDVIDV 185
>gi|315586217|gb|ADU40598.1| NifU family protein [Helicobacter pylori 35A]
Length = 326
Score = 71.0 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
D SG+ + +VQ+IK +V+D +RP + DGGD+ ++
Sbjct: 224 EAEKLKATADKSQSGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|119896844|ref|YP_932057.1| nitrogen fixation protein NifU [Azoarcus sp. BH72]
gi|119669257|emb|CAL93170.1| probable nitrogen fixation protein NifU [Azoarcus sp. BH72]
Length = 296
Score = 71.0 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI 140
I E + G + +++I++V++ + RP + RD GDI
Sbjct: 179 IEEILAKVLAERGETFKAAPPPEKKAPGKM--TTLERIRKIEQVIE-KARPNLQRDHGDI 235
Query: 141 VFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+++SM+GAC+GC + TL GV + + E+ + V
Sbjct: 236 ELVDVDGKNIYVSMKGACAGCQMEAATL-GGVQAQMIEALGELVKVIPV 283
>gi|261837669|gb|ACX97435.1| NifU scaffold protein [Helicobacter pylori 51]
Length = 326
Score = 71.0 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
D SG+ + +VQ+IK +V+D +RP + DGGD+ ++
Sbjct: 224 EAEKLKATADKSQSGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|118340528|gb|ABK80578.1| putative nifU domain protein [uncultured marine Nitrospinaceae
bacterium]
Length = 92
Score = 70.6 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 1 MFIQT--EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYF-- 56
M +Q E TPN LKF Q +L G F++ +EA+ P+A++IF+ +ASV+
Sbjct: 1 MSVQVTVETTPNEHALKFSVNQQILDSGYKTFNSLEEAKDFPVAAKIFANEAVASVFVMA 60
Query: 57 --GYDFITVG-KDQYDWEHLRPPVLGMIM 82
FITV K + W L+ ++ I
Sbjct: 61 QPSSAFITVTKKPETSWGDLQNKIVEGIK 89
>gi|261839079|gb|ACX98844.1| hypothetical protein HPKB_0231 [Helicobacter pylori 52]
Length = 326
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
D SG+ + +VQ+IK +V++ +RP + DGGD+ ++
Sbjct: 224 EAEKLKATADKSQSGELAFREMTMVQKIKAVDKVIEENIRPMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|7387939|sp|Q43909|NIFU_AZOBR RecName: Full=Nitrogen fixation protein nifU
gi|1597738|gb|AAC46176.1| nifU [Azospirillum brasilense]
Length = 310
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ +Q+I +++ RP + RDGGD+ +++ + GACSGC ++ T+ GV
Sbjct: 229 TNVQRMQKIMFAIED-WRPQIQRDGGDVELVDIDGKDIYVRLTGACSGCSQSAGTM-MGV 286
Query: 173 ANILNHFVPEVKDIRT 188
L + E ++
Sbjct: 287 QAKLVEALGEFVRVKP 302
>gi|242067733|ref|XP_002449143.1| hypothetical protein SORBIDRAFT_05g005735 [Sorghum bicolor]
gi|241934986|gb|EES08131.1| hypothetical protein SORBIDRAFT_05g005735 [Sorghum bicolor]
Length = 60
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 145 YRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+V L ++ AC CP++ T+K G+ L +PE+ + +
Sbjct: 3 IDGNVVRLKLQEACGSCPASVTTMKMGIERRLKEKIPEIVAVEPI 47
>gi|296171394|ref|ZP_06852727.1| NifU domain protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894169|gb|EFG73928.1| NifU domain protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 187
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 33/113 (29%), Gaps = 16/113 (14%)
Query: 70 WEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRV 129
W L V + E + + + E+L V
Sbjct: 66 WRELGDDVRAALGEALLEPQGWTVDESAAP----------------DLEGVAAELLAGPV 109
Query: 130 RPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
A GG I V + M GAC GCP+AS TL+ L +
Sbjct: 110 GALAASHGGSIELVSVAGHTVTVRMMGACDGCPAASSTLRDVFERELRRRFDD 162
>gi|322418923|ref|YP_004198146.1| Fe-S cluster assembly protein NifU [Geobacter sp. M18]
gi|320125310|gb|ADW12870.1| Fe-S cluster assembly protein NifU [Geobacter sp. M18]
Length = 286
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q I+E L+N +RP + DGGD+ V ++ R AC+GC S+ T K V L
Sbjct: 214 MQLIQETLENEIRPQLWADGGDLELIDIDGSNVQVAFRKACAGCASSGNTAK-FVEQKLR 272
Query: 178 HFV-PEV 183
V P++
Sbjct: 273 ELVSPDI 279
>gi|268680769|ref|YP_003305200.1| nitrogen-fixing NifU domain protein [Sulfurospirillum deleyianum
DSM 6946]
gi|268618800|gb|ACZ13165.1| nitrogen-fixing NifU domain protein [Sulfurospirillum deleyianum
DSM 6946]
Length = 329
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 93 HNGGLGDMKLDDMGSGDFIESDSAVV---QRIKEVLDNRVRPAVARDGGDIVFKGYRDGI 149
H+ L G D VV Q+I+ V+D +RP + DGG++ ++G
Sbjct: 225 HDRLLAISNAQIEGHSSVDFDDLTVVKKFQQIEAVIDENIRPMLVMDGGNLEILDIKEGD 284
Query: 150 -----VFLSMRGACSGCPSASETLKYGVANILNHFV 180
V++ GACSGC S+S + + ++L +
Sbjct: 285 DKVTDVYIRYLGACSGCASSSTGTLFAIESVLQEKL 320
>gi|83593605|ref|YP_427357.1| nitrogen-fixing NifU-like [Rhodospirillum rubrum ATCC 11170]
gi|83576519|gb|ABC23070.1| Nitrogen-fixing NifU-like [Rhodospirillum rubrum ATCC 11170]
Length = 99
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
++ EVL+ +RP + RD GDI D +F+++ GAC GC +S TL G+ L
Sbjct: 8 AKVAEVLETVIRPRLRRDNGDIELVRIEDHKIFVTLTGACVGCQLSSITL-SGIQQKLME 66
Query: 179 FV 180
V
Sbjct: 67 AV 68
>gi|50955615|ref|YP_062903.1| hypothetical protein Lxx21000 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50952097|gb|AAT89798.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 156
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 36/92 (39%)
Query: 95 GGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSM 154
G L S D ++ + ++LD + GG DG+V L +
Sbjct: 53 SAPGTWTLSGPASVPPPADDESLRAALVQLLDGAAGDFIRSHGGRPTIVSVHDGVVTLRL 112
Query: 155 RGACSGCPSASETLKYGVANILNHFVPEVKDI 186
G C CP+A +T+ + L PEV+ +
Sbjct: 113 GGTCGACPAAGQTVATRITAQLRESHPEVRCV 144
>gi|254778929|ref|YP_003057034.1| [Fe-S] cluster scaffold protein [Helicobacter pylori B38]
gi|254000840|emb|CAX28770.1| [Fe-S] cluster scaffold protein [Helicobacter pylori B38]
Length = 326
Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ SG+ + +VQ+IK +V+D +RP + DGGD+ ++
Sbjct: 224 EAEKLKAAANKSQSGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|288957497|ref|YP_003447838.1| nitrogen fixation protein [Azospirillum sp. B510]
gi|288909805|dbj|BAI71294.1| nitrogen fixation protein [Azospirillum sp. B510]
Length = 307
Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 95 GGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSM 154
+ ++ + ++ ++ I ++ +RP + RDGGD+ +++ +
Sbjct: 207 DAIKPLEPRAEPAAAPKLTNVQRMKVIMSAIEE-MRPQIQRDGGDVELVDIDGKDIYVRL 265
Query: 155 RGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
GACSGC ++ T+ GV L + E ++
Sbjct: 266 SGACSGCSQSAGTM-MGVQMKLVEKLGEFVRVKP 298
>gi|221482460|gb|EEE20808.1| hypothetical protein TGGT1_065730 [Toxoplasma gondii GT1]
Length = 483
Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++VL++ VRP + GG++ IV L+ +GACS CPSA +TL G+ L
Sbjct: 262 MVEQVLES-VRPYLRGHGGNVKLVELDSEKKIVRLAFKGACSTCPSAHQTLYEGLQGALR 320
Query: 178 HFVPEVKDIRT 188
P++ +
Sbjct: 321 EVWPDL-SVEE 330
>gi|205374729|ref|ZP_03227523.1| NifU-like protein [Bacillus coahuilensis m4-4]
Length = 48
Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 143 KGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
DG+V L + GAC CPS++ TLK G+ L
Sbjct: 1 MDIEDGVVKLRLLGACGSCPSSTITLKAGIERAL 34
>gi|222824470|ref|YP_002576044.1| NifU-like protein [Campylobacter lari RM2100]
gi|222539691|gb|ACM64792.1| NifU-like protein [Campylobacter lari RM2100]
Length = 323
Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 93 HNGGLGDMKLDDMGSGDFIESDSAVVQR---IKEVLDNRVRPAVARDGGDIVFKGYRDG- 148
+ KL D D D +V++ ++ VLD+ VRP + DGGD+ +
Sbjct: 219 TRAEMEREKLKDQSKTDIAFDDMTMVKQLKAVEAVLDSDVRPMLHGDGGDLEVIDIQKSE 278
Query: 149 ----IVFLSMRGACSGCPS-ASETLKYGVANILNHFV-PEVKDI 186
+++ GACSGC S + TL Y + NIL + P ++ I
Sbjct: 279 NKNIDIYIRYLGACSGCSSGSGATL-YAIENILQEELSPNIRVI 321
>gi|308063082|gb|ADO04969.1| nifU-like protein [Helicobacter pylori Sat464]
Length = 326
Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ SG+ + +VQ+IK +V+D +RP + DGGD+ ++
Sbjct: 224 EAEKLKATANKSQSGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|15644849|ref|NP_207019.1| nifU-like protein [Helicobacter pylori 26695]
gi|2313312|gb|AAD07289.1| nifU-like protein [Helicobacter pylori 26695]
Length = 326
Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ SG+ + +VQ+IK +V+D +RP + DGGD+ ++
Sbjct: 224 EAEKLKATANKSQSGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|297379446|gb|ADI34333.1| Nitrogen fixation protein nifU [Helicobacter pylori v225d]
Length = 326
Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ SG+ + +VQ+IK +V+D +RP + DGGD+ ++
Sbjct: 224 EAEKLKATANKSQSGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|168698909|ref|ZP_02731186.1| NifU-like nitrogen fixation protein [Gemmata obscuriglobus UQM
2246]
Length = 76
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ +R++ L + PA+ DG I G+ + + GAC+GCP+ T+ + + L
Sbjct: 3 LKERVEHALKVEIAPALMLDGAGIEVLEVTGGVASVRLSGACAGCPATIMTVITSLEDEL 62
Query: 177 NHFVPEVKDIRTV 189
VPEV+ + V
Sbjct: 63 RKKVPEVEILEAV 75
>gi|158425034|ref|YP_001526326.1| putative NifU protein [Azorhizobium caulinodans ORS 571]
gi|158331923|dbj|BAF89408.1| putative NifU protein [Azorhizobium caulinodans ORS 571]
Length = 94
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+RI + + +RP + RDGGD G V + M GAC C AS TL G+ + L
Sbjct: 19 ERIIKAVIEEIRPNLQRDGGDCQLLGLEGNKVLVKMTGACVFCKLASMTL-EGIQSRLVE 77
Query: 179 FVPEVKDIRTV 189
+ E+ + V
Sbjct: 78 RLGELVRVVPV 88
>gi|308061573|gb|ADO03461.1| nifU-like protein [Helicobacter pylori Cuz20]
Length = 326
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ SG+ + +VQ+IK +V+D +RP + DGGD+ ++
Sbjct: 224 EAEKLKATANKSQSGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|317177038|dbj|BAJ54827.1| nifU-like protein [Helicobacter pylori F16]
Length = 326
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ SG+ + +VQ+IK +V++ +RP + DGGD+ ++
Sbjct: 224 EAEKLKAAANKSQSGELAFREMTMVQKIKAVDKVIEENIRPMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|162146272|ref|YP_001600731.1| nitrogen fixation protein nifU [Gluconacetobacter diazotrophicus
PAl 5]
gi|209543724|ref|YP_002275953.1| Fe-S cluster assembly protein NifU [Gluconacetobacter
diazotrophicus PAl 5]
gi|11034776|gb|AAG27073.1|AF105225_9 NifU [Gluconacetobacter diazotrophicus PAl 5]
gi|161784847|emb|CAP54390.1| Nitrogen fixation protein nifU [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531401|gb|ACI51338.1| Fe-S cluster assembly protein NifU [Gluconacetobacter
diazotrophicus PAl 5]
Length = 309
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 50/142 (35%), Gaps = 12/142 (8%)
Query: 48 IPGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGS 107
+ G+ V ++ + + +L + G + +
Sbjct: 176 VEGVEGVL----------ERTNAAMVAEGLLDPVQAFVPGGAAPVRGRAQKTSPVAPPAR 225
Query: 108 GDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASET 167
+ ++ I+EVL+ +RPA+ DGGD D V + + GAC C A+ T
Sbjct: 226 TGGKMTTVQKIRAIEEVLEE-LRPALRNDGGDCELVDVEDNRVMVRLTGACVNCQLAAVT 284
Query: 168 LKYGVANILNHFVPEVKDIRTV 189
+ G+ + + + V
Sbjct: 285 V-QGIQGRIAERLGTPVRVIPV 305
>gi|317181531|dbj|BAJ59315.1| nifU-like protein [Helicobacter pylori F57]
Length = 326
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ SG+ + +VQ+IK +V+D +RP + DGGD+ ++
Sbjct: 224 EAEKLKATANKSQSGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|317050896|ref|YP_004112012.1| nitrogen-fixing NifU domain-containing protein [Desulfurispirillum
indicum S5]
gi|316945980|gb|ADU65456.1| nitrogen-fixing NifU domain protein [Desulfurispirillum indicum S5]
Length = 321
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 95 GGLGDMKLDDMGSGDFIESDSAV--VQRIKEVLDNRVRPAVARDGGDIVFKGYRDG---- 148
+ ++ + S ++ S V ++ I E L V+P +ARDGG + ++G
Sbjct: 221 AEMDAEQIKEQASATDFKAMSLVGKIKAIDEALTAHVKPMLARDGGSVELVDIKEGDNEI 280
Query: 149 IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+VF+ GAC+GC S++ + IL + E + V
Sbjct: 281 LVFIQYSGACAGCASSNTGTLQAILGILREKLDERIMVVPV 321
>gi|217034049|ref|ZP_03439471.1| hypothetical protein HP9810_891g53 [Helicobacter pylori 98-10]
gi|216943557|gb|EEC23008.1| hypothetical protein HP9810_891g53 [Helicobacter pylori 98-10]
Length = 326
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ SG+ + +VQ+IK +V++ +RP + DGGD+ ++
Sbjct: 224 EAEKLKATANKSQSGELAFREMTMVQKIKAVDKVIEENIRPMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|317180027|dbj|BAJ57813.1| nifU-like protein [Helicobacter pylori F32]
Length = 326
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ SG+ + +VQ+IK +V++ +RP + DGGD+ ++
Sbjct: 224 EAEKLKATANKSQSGELAFREMTMVQKIKAVDKVIEENIRPMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|223934715|ref|ZP_03626635.1| nitrogen-fixing NifU domain protein [bacterium Ellin514]
gi|223896670|gb|EEF63111.1| nitrogen-fixing NifU domain protein [bacterium Ellin514]
Length = 305
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ R+ E LD +VRP + GG++ + L ++G C CPS++ TL+ V + +
Sbjct: 114 LEARLLEALD-KVRPYMESHGGNVELISLVNDKACLRLQGTCKSCPSSAITLELAVRHAI 172
Query: 177 NHFVPEVK--DIR 187
P++ ++
Sbjct: 173 EEACPDLIGFEVE 185
>gi|226942441|ref|YP_002797514.1| NifU C-terminal domain-containing protein VnfU [Azotobacter
vinelandii DJ]
gi|732317|sp|P40432|YVN2_AZOVI RecName: Full=Uncharacterized 10.3 kDa protein in vnfA 5'region
gi|1088269|gb|AAA82515.1| unknown protein [Azotobacter vinelandii]
gi|226717368|gb|ACO76539.1| NifU C-terminal domain-containing protein, VnfU [Azotobacter
vinelandii DJ]
Length = 96
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 102 LDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGC 161
++ + + + ++E ++ R+RP V RDGGD+ +D IV L ++GAC GC
Sbjct: 9 EENATTLAITPIPAESLPLVRETVE-RLRPGVQRDGGDLELVAVQDNIVRLRLKGACVGC 67
Query: 162 PSASETLKYGVANIL 176
+++TL GV L
Sbjct: 68 AMSAQTL-GGVRREL 81
>gi|317179382|dbj|BAJ57170.1| nifU-like protein [Helicobacter pylori F30]
Length = 326
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ SG+ + +VQ+IK +V++ +RP + DGGD+ ++
Sbjct: 224 EAEKLKATANKSQSGELAFREMTMVQKIKAVDKVIEENIRPMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|508310|gb|AAA22184.1| nitrogen fixation protein [Azospirillum brasilense]
Length = 307
Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++RI ++ +RP + RDGGD+ +++ + GACSGC ++ ++ GV L
Sbjct: 233 MRRIMFAIEE-LRPQIQRDGGDVELVDIDGKDIYVRLTGACSGCSQSAASM-MGVQAKLV 290
Query: 178 HFVPEVKDIRT 188
+ E ++
Sbjct: 291 EALGEFVRVKP 301
>gi|317012066|gb|ADU82674.1| nifu-like protein [Helicobacter pylori Lithuania75]
Length = 326
Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ +G+ + +VQ+IK +V+D +RP + DGGD+ ++
Sbjct: 224 EAEKLKAAANKSQNGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|319957255|ref|YP_004168518.1| nitrogen-fixing nifu domain protein [Nitratifractor salsuginis DSM
16511]
gi|319419659|gb|ADV46769.1| nitrogen-fixing NifU domain protein [Nitratifractor salsuginis DSM
16511]
Length = 95
Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD + IK L + V G + F G ++G ++ + G C+GC + T
Sbjct: 1 MMPFSDEDLCVAIKNYL-PSIEEYVKSHEGTMGFLGVKNGTAYVELGGTCNGCSMSVMTT 59
Query: 169 KYGVANILNHFV-PEVKDIRTV 189
K + L + PE+ ++ ++
Sbjct: 60 KMVIQKKLRELIHPEL-NVESI 80
>gi|237841427|ref|XP_002370011.1| hypothetical protein TGME49_021920 [Toxoplasma gondii ME49]
gi|211967675|gb|EEB02871.1| hypothetical protein TGME49_021920 [Toxoplasma gondii ME49]
Length = 517
Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+++VL++ VRP + GG++ V L+ +GACS CPSA +TL G+ L
Sbjct: 296 MVEQVLES-VRPYLRGHGGNVKLVELDSEKKTVRLAFKGACSTCPSAHQTLYEGLQGALR 354
Query: 178 HFVPEVKDIRT 188
P++ +
Sbjct: 355 EVWPDL-SVEE 364
>gi|149193836|ref|ZP_01870934.1| NifU family protein [Caminibacter mediatlanticus TB-2]
gi|149135789|gb|EDM24267.1| NifU family protein [Caminibacter mediatlanticus TB-2]
Length = 321
Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Query: 89 DPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG 148
+ ++K + S ++ I+E LD +++P +A DGG + R+G
Sbjct: 217 KQVNEEMKKEEIKNSAITEDFEKMSLVKKIKAIEEFLDTKIKPMLAMDGGSLELIDIREG 276
Query: 149 ----IVFLSMRGACSGCPSASETLKYGVANILNHF 179
VF+ GACS C S TL + +
Sbjct: 277 DGVTTVFVRYLGACSTCASGDMTL-MAIEEEMKKH 310
>gi|282855016|ref|ZP_06264348.1| NifU-like protein [Propionibacterium acnes J139]
gi|282581604|gb|EFB86989.1| NifU-like protein [Propionibacterium acnes J139]
gi|314982109|gb|EFT26202.1| NifU-like domain protein [Propionibacterium acnes HL110PA3]
gi|315090348|gb|EFT62324.1| NifU-like domain protein [Propionibacterium acnes HL110PA4]
Length = 180
Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 66/199 (33%), Gaps = 41/199 (20%)
Query: 3 IQTEDTPNPATLKFIP--------GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASV 54
+ E T +PATL+++ G +V G F N E + + +V
Sbjct: 11 VHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEAT-----------VGAV 59
Query: 55 YFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD 114
TV + WE + + D + +
Sbjct: 60 M-----ATVL--EGTWERIGAGFRTALTTALERTDEWVGG-----------PDSKPLNEV 101
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY----RDGIVFLSMRGACSGCPSASETLKY 170
+ + E++ V A GG I + V ++M+GAC GCP+A TL
Sbjct: 102 ETLRRCADELIGGPVGAVAAMHGGSIELVDVSVGDEERRVDVAMKGACRGCPAAIMTLHQ 161
Query: 171 GVANILNHFVPEVKDIRTV 189
+ L+ + E +R +
Sbjct: 162 RLERQLSLRLREPVTVREI 180
>gi|207092082|ref|ZP_03239869.1| nifU-like protein [Helicobacter pylori HPKX_438_AG0C1]
Length = 326
Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ +G+ + +VQ+IK +V+D +RP + DGGD+ ++
Sbjct: 224 EAEKLKATANKSQNGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|237800690|ref|ZP_04589151.1| yhgI protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331023549|gb|EGI03606.1| yhgI protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 197
Score = 69.1 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD----GIVFLSMRGACSGCPSAS 165
+ +DS + +RI L + P +A GG + + I L G C GC A
Sbjct: 103 MVNADSPINERINYYLQTEINPGLASHGGQVTLIDVVEEEAKNIAVLQFGGGCQGCGQAD 162
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TLK G+ L +PE+ +R V
Sbjct: 163 VTLKEGIERTLLERIPELSGVRDV 186
>gi|28869922|ref|NP_792541.1| yhgI protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|71733229|ref|YP_274816.1| yhgI protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|213967039|ref|ZP_03395189.1| yhgI protein [Pseudomonas syringae pv. tomato T1]
gi|257487846|ref|ZP_05641887.1| yhgI protein [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|298487191|ref|ZP_07005240.1| Protein yhgI [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|301385224|ref|ZP_07233642.1| yhgI protein [Pseudomonas syringae pv. tomato Max13]
gi|302063281|ref|ZP_07254822.1| yhgI protein [Pseudomonas syringae pv. tomato K40]
gi|302130165|ref|ZP_07256155.1| yhgI protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|302186181|ref|ZP_07262854.1| yhgI protein [Pseudomonas syringae pv. syringae 642]
gi|51702171|sp|Q881Z4|NFUA_PSESM RecName: Full=Fe/S biogenesis protein nfuA
gi|123636367|sp|Q48IG5|NFUA_PSE14 RecName: Full=Fe/S biogenesis protein nfuA
gi|28853167|gb|AAO56236.1| yhgI protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|71553782|gb|AAZ32993.1| yhgI protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|213928361|gb|EEB61906.1| yhgI protein [Pseudomonas syringae pv. tomato T1]
gi|298158215|gb|EFH99286.1| Protein yhgI [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|320324604|gb|EFW80681.1| yhgI protein [Pseudomonas syringae pv. glycinea str. B076]
gi|320328977|gb|EFW84976.1| yhgI protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330875109|gb|EGH09258.1| yhgI protein [Pseudomonas syringae pv. morsprunorum str. M302280PT]
gi|330878760|gb|EGH12909.1| yhgI protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330890778|gb|EGH23439.1| yhgI protein [Pseudomonas syringae pv. mori str. 301020]
gi|330953380|gb|EGH53640.1| yhgI protein [Pseudomonas syringae Cit 7]
gi|330965356|gb|EGH65616.1| yhgI protein [Pseudomonas syringae pv. actinidiae str. M302091]
gi|330982174|gb|EGH80277.1| yhgI protein [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|330985304|gb|EGH83407.1| yhgI protein [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331008555|gb|EGH88611.1| yhgI protein [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|331014346|gb|EGH94402.1| yhgI protein [Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 197
Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD----GIVFLSMRGACSGCPSAS 165
+ +DS + +RI L + P +A GG + + I L G C GC A
Sbjct: 103 MVNADSPINERINYYLQTEINPGLASHGGQVTLIDVVEEEAKNIAVLQFGGGCQGCGQAD 162
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TLK G+ L +PE+ +R V
Sbjct: 163 VTLKEGIERTLLERIPELSGVRDV 186
>gi|289625119|ref|ZP_06458073.1| HesB/YadR/YfhF:nitrogen-fixing NifU, C-terminal [Pseudomonas
syringae pv. aesculi str. NCPPB3681]
gi|330867989|gb|EGH02698.1| HesB/YadR/YfhF:nitrogen-fixing NifU [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 197
Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD----GIVFLSMRGACSGCPSAS 165
+ +DS + +RI L + P +A GG + + I L G C GC A
Sbjct: 103 MVNADSPINERINYYLQTEINPGLASHGGQVTLIDVVEEESKNIAVLQFGGGCQGCGQAD 162
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TLK G+ L +PE+ +R V
Sbjct: 163 VTLKEGIERTLLERIPELSGVRDV 186
>gi|223043286|ref|ZP_03613333.1| conserved virulence factor C [Staphylococcus capitis SK14]
gi|314933620|ref|ZP_07840985.1| scaffold protein Nfu/NifU N [Staphylococcus caprae C87]
gi|222443497|gb|EEE49595.1| conserved virulence factor C [Staphylococcus capitis SK14]
gi|313653770|gb|EFS17527.1| scaffold protein Nfu/NifU N [Staphylococcus caprae C87]
Length = 84
Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 7 DTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK- 65
+TPN T+K + + +++AKE + +R+F I G+ S+++ DFI+V K
Sbjct: 8 ETPNHNTMKISLSEPRQDNSSTTYTSAKEGQ-PEFINRLFDIDGVKSIFYVMDFISVDKE 66
Query: 66 DQYDWEHLRPPVLGM 80
D +W+ L P +
Sbjct: 67 DDANWDDLLPQIQAA 81
>gi|289673857|ref|ZP_06494747.1| yhgI protein [Pseudomonas syringae pv. syringae FF5]
Length = 197
Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD----GIVFLSMRGACSGCPSAS 165
+ +DS + +RI L + P +A GG + + I L G C GC A
Sbjct: 103 MVNADSPINERINYYLQTEINPGLASHGGQVTLIDVVEEEAKNIAVLQFGGGCQGCGQAD 162
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TLK G+ L +PE+ +R V
Sbjct: 163 VTLKEGIERTLLERIPELSGVRDV 186
>gi|210134422|ref|YP_002300861.1| nifu-like protein [Helicobacter pylori P12]
gi|210132390|gb|ACJ07381.1| nifu-like protein [Helicobacter pylori P12]
Length = 326
Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ +G+ + +VQ+IK +V+D +RP + DGGD+ ++
Sbjct: 224 EAEKLKATANKSQNGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|330971276|gb|EGH71342.1| HesB/YadR/YfhF:nitrogen-fixing NifU [Pseudomonas syringae pv.
aceris str. M302273PT]
Length = 197
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD----GIVFLSMRGACSGCPSAS 165
+ +DS + +RI L + P +A GG + + I L G C GC A
Sbjct: 103 MVNADSPINERINYYLQTEINPGLASHGGQVTLIDVVEEEMKNIAVLQFGGGCQGCGQAD 162
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TLK G+ L +PE+ +R V
Sbjct: 163 VTLKEGIERTLLERIPELSGVRDV 186
>gi|66045702|ref|YP_235543.1| HesB/YadR/YfhF:nitrogen-fixing NifU, C-terminal [Pseudomonas
syringae pv. syringae B728a]
gi|75502102|sp|Q4ZTL7|NFUA_PSEU2 RecName: Full=Fe/S biogenesis protein nfuA
gi|63256409|gb|AAY37505.1| HesB/YadR/YfhF:Nitrogen-fixing NifU, C-terminal [Pseudomonas
syringae pv. syringae B728a]
Length = 197
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD----GIVFLSMRGACSGCPSAS 165
+ +DS + +RI L + P +A GG + + I L G C GC A
Sbjct: 103 MVNADSPINERINYYLQTEINPGLASHGGQVTLIDVVEEETKNIAVLQFGGGCQGCGQAD 162
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TLK G+ L +PE+ +R V
Sbjct: 163 VTLKEGIERTLLERIPELSGVRDV 186
>gi|71031895|ref|XP_765589.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352546|gb|EAN33306.1| hypothetical protein TP01_0062 [Theileria parva]
Length = 150
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 6/121 (4%)
Query: 65 KDQYDWEH-LRPPVLGMIMEHFISGDPIIHNGGLG-DMKLDDMGSGDFIES---DSAVVQ 119
K + W L P + I + G + + K +D ++ E +
Sbjct: 15 KYSFPWTLKLAPNLSYTIHKIRWKGFNLNSEPTDSLEYKPNDGKQLEYDEEGWLMDLNTK 74
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
+++VLD +RP ++ DGG I D V + G+C GCP S TLK + N L F
Sbjct: 75 NVEDVLD-LIRPQLSSDGGGISLCKIVDNEVHVKFTGSCVGCPYRSTTLKELIENNLVKF 133
Query: 180 V 180
+
Sbjct: 134 I 134
>gi|330945034|gb|EGH46794.1| yhgI protein [Pseudomonas syringae pv. pisi str. 1704B]
Length = 197
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD----GIVFLSMRGACSGCPSAS 165
+ +DS + +RI L + P +A GG + + I L G C GC A
Sbjct: 103 MVNADSPINERINYYLQTEINPGLASHGGQVTLIDVVEEEAKNIAVLQFGGGCQGCGQAD 162
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TLK G+ L +PE+ +R V
Sbjct: 163 VTLKEGIERTLLERIPELSGVRDV 186
>gi|109947989|ref|YP_665217.1| nifU-like protein [Helicobacter acinonychis str. Sheeba]
gi|109715210|emb|CAK00218.1| nifU-like protein [Helicobacter acinonychis str. Sheeba]
Length = 326
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ SG+ + + +VQ+IK +V+D +RP + DGGD+ ++
Sbjct: 224 EAEKLKAAANKSQSGELVFREMTMVQKIKAVDKVIDENIRPMLVMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|315636035|ref|ZP_07891294.1| NifU family protein [Arcobacter butzleri JV22]
gi|315479691|gb|EFU70365.1| NifU family protein [Arcobacter butzleri JV22]
Length = 326
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIKE---VLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ +G S+ +VQRIK VLD +RP + DGG++ ++ +
Sbjct: 224 EQEKLKNAANASAAGTISFSEMTLVQRIKAIDSVLDEDIRPMLVMDGGNMEIIDIKENLP 283
Query: 150 ---VFLSMRGACSGCPS-ASETLKYGVANILNHFVPEVKDIRTV 189
+++ G+CSGC S ++ TL Y + +IL + + + +
Sbjct: 284 HYDLYIRYLGSCSGCASGSTGTL-YAIESILQQKIDDNIRVLPI 326
>gi|157736864|ref|YP_001489547.1| NifU-like protein [Arcobacter butzleri RM4018]
gi|157698718|gb|ABV66878.1| NifU-like protein [Arcobacter butzleri RM4018]
Length = 326
Score = 68.7 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIKE---VLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ +G S+ +VQRIK VLD +RP + DGG++ ++ +
Sbjct: 224 EQEKLKNAANASAAGTISFSEMTLVQRIKAIDSVLDEDIRPMLVMDGGNMEIIDIKENLP 283
Query: 150 ---VFLSMRGACSGCPS-ASETLKYGVANILNHFVPEVKDIRTV 189
+++ G+CSGC S ++ TL Y + +IL + + + +
Sbjct: 284 HYDLYIRYLGSCSGCASGSTGTL-YAIESILQQKIDDNIRVLPI 326
>gi|313763388|gb|EFS34752.1| NifU-like domain protein [Propionibacterium acnes HL013PA1]
gi|313814688|gb|EFS52402.1| NifU-like domain protein [Propionibacterium acnes HL059PA1]
gi|313828234|gb|EFS65948.1| NifU-like domain protein [Propionibacterium acnes HL063PA2]
gi|314914534|gb|EFS78365.1| NifU-like domain protein [Propionibacterium acnes HL005PA4]
gi|314917602|gb|EFS81433.1| NifU-like domain protein [Propionibacterium acnes HL050PA1]
gi|314919642|gb|EFS83473.1| NifU-like domain protein [Propionibacterium acnes HL050PA3]
gi|314924272|gb|EFS88103.1| NifU-like domain protein [Propionibacterium acnes HL001PA1]
gi|314930285|gb|EFS94116.1| NifU-like domain protein [Propionibacterium acnes HL067PA1]
gi|314956856|gb|EFT01010.1| NifU-like domain protein [Propionibacterium acnes HL027PA1]
gi|314957641|gb|EFT01744.1| NifU-like domain protein [Propionibacterium acnes HL002PA1]
gi|314967390|gb|EFT11489.1| NifU-like domain protein [Propionibacterium acnes HL082PA2]
gi|314968976|gb|EFT13074.1| NifU-like domain protein [Propionibacterium acnes HL037PA1]
gi|315093631|gb|EFT65607.1| NifU-like domain protein [Propionibacterium acnes HL060PA1]
gi|315098013|gb|EFT69989.1| NifU-like domain protein [Propionibacterium acnes HL059PA2]
gi|315102641|gb|EFT74617.1| NifU-like domain protein [Propionibacterium acnes HL046PA1]
gi|315104468|gb|EFT76444.1| NifU-like domain protein [Propionibacterium acnes HL050PA2]
gi|315106211|gb|EFT78187.1| NifU-like domain protein [Propionibacterium acnes HL030PA1]
gi|315110456|gb|EFT82432.1| NifU-like domain protein [Propionibacterium acnes HL030PA2]
gi|327325471|gb|EGE67275.1| hypothetical protein HMPREF9341_02505 [Propionibacterium acnes
HL103PA1]
gi|327451220|gb|EGE97874.1| NifU-like domain protein [Propionibacterium acnes HL087PA3]
gi|327452577|gb|EGE99231.1| NifU-like domain protein [Propionibacterium acnes HL083PA2]
gi|328754783|gb|EGF68399.1| NifU-like domain protein [Propionibacterium acnes HL087PA1]
Length = 180
Score = 68.3 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 66/199 (33%), Gaps = 41/199 (20%)
Query: 3 IQTEDTPNPATLKFIP--------GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASV 54
+ E T +PATL+++ G +V G F N E + + +V
Sbjct: 11 VHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEAT-----------VGAV 59
Query: 55 YFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD 114
TV + WE + + D + +
Sbjct: 60 M-----ATVL--EGTWERIGAGFRTALTTALERTDEWVGG-----------PDSKPLNEV 101
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY----RDGIVFLSMRGACSGCPSASETLKY 170
+ + E++ V A GG I + V ++M+GAC GCP+A TL
Sbjct: 102 ETLRRCADELIGGPVGAVAAMHGGSIELVDVSVGDEERRVDVTMKGACRGCPAAIMTLHQ 161
Query: 171 GVANILNHFVPEVKDIRTV 189
+ L+ + E +R +
Sbjct: 162 RLERQLSLRLREPVTVREI 180
>gi|50843141|ref|YP_056368.1| hypothetical protein PPA1678 [Propionibacterium acnes KPA171202]
gi|289424869|ref|ZP_06426648.1| NifU-like protein [Propionibacterium acnes SK187]
gi|50840743|gb|AAT83410.1| hypothetical protein PPA1678 [Propionibacterium acnes KPA171202]
gi|289154568|gb|EFD03254.1| NifU-like protein [Propionibacterium acnes SK187]
Length = 181
Score = 68.3 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 66/199 (33%), Gaps = 41/199 (20%)
Query: 3 IQTEDTPNPATLKFIP--------GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASV 54
+ E T +PATL+++ G +V G F N E + + +V
Sbjct: 12 VHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEAT-----------VGAV 60
Query: 55 YFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD 114
TV + WE + + D + +
Sbjct: 61 M-----ATVL--EGTWERIGAGFRTALTTALERTDEWVGG-----------PDSKPLNEV 102
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY----RDGIVFLSMRGACSGCPSASETLKY 170
+ + E++ V A GG I + V ++M+GAC GCP+A TL
Sbjct: 103 ETLRRCADELIGGPVGAVAAMHGGSIELVDVSVGDEERRVDVTMKGACRGCPAAIMTLHQ 162
Query: 171 GVANILNHFVPEVKDIRTV 189
+ L+ + E +R +
Sbjct: 163 RLERQLSLRLREPVTVREI 181
>gi|326385392|ref|ZP_08207036.1| nitrogen fixation protein nifU [Novosphingobium nitrogenifigens DSM
19370]
gi|326210109|gb|EGD60882.1| nitrogen fixation protein nifU [Novosphingobium nitrogenifigens DSM
19370]
Length = 307
Score = 68.3 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 9/118 (7%)
Query: 63 VGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIK 122
V + L P F +G + ++ D+ + ++ ++ I+
Sbjct: 186 VNAEMVAEGALAPE------RAFRAGVAPLPVKERKIVRTDERAPAKPL-TNLQKIRLIE 238
Query: 123 EVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
E L++ +RP++ RDGGD V + + GAC GC +S T+ GV L +
Sbjct: 239 ETLES-IRPSLQRDGGDCELVDVEGNRVMVKLTGACVGCHLSSATI-EGVQARLVEAL 294
>gi|86748105|ref|YP_484601.1| nitrogen-fixing NifU-like protein [Rhodopseudomonas palustris HaA2]
gi|86571133|gb|ABD05690.1| Nitrogen-fixing NifU-like protein [Rhodopseudomonas palustris HaA2]
Length = 333
Score = 68.3 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ + E L++ +RP + RDGGD +V++ + G C GC +S TL GV
Sbjct: 261 PLTSLVAEALED-LRPHLQRDGGDCELVSVEGNVVYVRLSGNCVGCQLSSVTL-SGVQAR 318
Query: 176 L 176
L
Sbjct: 319 L 319
>gi|316936083|ref|YP_004111065.1| Fe-S cluster assembly protein NifU [Rhodopseudomonas palustris
DX-1]
gi|315603797|gb|ADU46332.1| Fe-S cluster assembly protein NifU [Rhodopseudomonas palustris
DX-1]
Length = 329
Score = 68.3 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
D ++ + + ++E+ RP + RDGGD F IV++ + G C GC +S TL
Sbjct: 254 DAPPQEALIAEAVEEL-----RPHLQRDGGDCEFVSLDGNIVYVRLTGNCVGCQLSSVTL 308
Query: 169 KYGVANILNHFVPEVKDIRTV 189
GV L + V
Sbjct: 309 -SGVQARLAEKFGRPLRVVPV 328
>gi|188527026|ref|YP_001909713.1| nifU-like protein [Helicobacter pylori Shi470]
gi|188143266|gb|ACD47683.1| nifU-like protein [Helicobacter pylori Shi470]
Length = 326
Score = 68.3 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ SG+ + +VQ+IK +V+D +RP + DGGD+ ++
Sbjct: 224 EAEKLKATANKSQSGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSAATGTLFAIENALQE 315
>gi|297616852|ref|YP_003702011.1| nitrogen-fixing NifU domain protein [Syntrophothermus lipocalidus
DSM 12680]
gi|297144689|gb|ADI01446.1| nitrogen-fixing NifU domain protein [Syntrophothermus lipocalidus
DSM 12680]
Length = 102
Score = 67.9 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 35/70 (50%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ + + ++L +V P + GD+ F D V + ++GAC C +A T++ + +
Sbjct: 1 MKETLVKLLAEKVTPYLQMHAGDVEFVDVVDNCVSIRLKGACQDCSAAQITVETVIKEAI 60
Query: 177 NHFVPEVKDI 186
PE++ +
Sbjct: 61 VSRFPEIEKV 70
>gi|228475998|ref|ZP_04060706.1| conserved virulence factor C [Staphylococcus hominis SK119]
gi|314936427|ref|ZP_07843774.1| scaffold protein Nfu/NifU N [Staphylococcus hominis subsp.
hominis C80]
gi|228269821|gb|EEK11301.1| conserved virulence factor C [Staphylococcus hominis SK119]
gi|313655046|gb|EFS18791.1| scaffold protein Nfu/NifU N [Staphylococcus hominis subsp.
hominis C80]
Length = 82
Score = 67.9 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 1 MFIQ-TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
M I+ EDTPN T+K + + +++A++ + +R+F I G+ SV++ D
Sbjct: 1 MHIKSIEDTPNYNTIKINLSEKRKDNQSNTYTSAQDGQPD-FINRLFDIEGVKSVFYVMD 59
Query: 60 FITVGKDQ-YDWEHLRPPVLGM 80
FI+V K++ +W+ L P +
Sbjct: 60 FISVDKEEYANWDDLVPKIEDT 81
>gi|242373742|ref|ZP_04819316.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W1]
gi|242348562|gb|EES40164.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W1]
Length = 84
Score = 67.9 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 7 DTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK- 65
+TPN T+K + + +++AKE + +R+F I G+ S+++ DFI+V K
Sbjct: 8 ETPNHNTMKISLSEPRQDNSSTTYTSAKEGQPD-FINRLFEIDGVKSIFYVMDFISVDKE 66
Query: 66 DQYDWEHLRPPVLGM 80
D +W+ L P +
Sbjct: 67 DDANWDDLLPQIQDA 81
>gi|313683642|ref|YP_004061380.1| nitrogen-fixing nifu domain protein [Sulfuricurvum kujiense DSM
16994]
gi|313156502|gb|ADR35180.1| nitrogen-fixing NifU domain protein [Sulfuricurvum kujiense DSM
16994]
Length = 324
Score = 67.9 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 46/118 (38%), Gaps = 12/118 (10%)
Query: 73 LRP---PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKE---VLD 126
++P + ++ + D GDF +VQ+IK V+D
Sbjct: 200 IKPGGHEAREYYLVDILADVRAEMDQEKMRAAADAGSHGDFEA--MTLVQKIKAIDSVID 257
Query: 127 NRVRPAVARDGGDIVFKGYRDG----IVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+R + DGG++ +D V++ GAC+GC S+S Y + L +
Sbjct: 258 ESIRQFLIMDGGNMEVIDIKDSPDYIDVYIRYLGACNGCASSSTGTLYAIEATLKEKL 315
>gi|153955633|ref|YP_001396398.1| hypothetical protein CKL_3019 [Clostridium kluyveri DSM 555]
gi|219856010|ref|YP_002473132.1| hypothetical protein CKR_2667 [Clostridium kluyveri NBRC 12016]
gi|146348491|gb|EDK35027.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219569734|dbj|BAH07718.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 107
Score = 67.5 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++I +V+D +VRP + GDI G +DG+V + + G CSGC SA T++ V +
Sbjct: 15 MKEKILKVIDEKVRPYLNSHNGDIEVVGVKDGVVKVKLLGQCSGCISAKYTVQDIVEGSI 74
Query: 177 NHFVPEVKDIRTV 189
+ +PE+K + +
Sbjct: 75 KNEIPEIKSVEVI 87
>gi|328751973|gb|EGF65589.1| NifU-like domain protein [Propionibacterium acnes HL025PA2]
Length = 180
Score = 67.5 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 69/199 (34%), Gaps = 41/199 (20%)
Query: 3 IQTEDTPNPATLKFIP--------GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASV 54
+ E T +PATL+++ G +V G F N E + + +V
Sbjct: 11 VHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEAT-----------VGAV 59
Query: 55 YFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD 114
TV + WE + + D GG L+++ +
Sbjct: 60 M-----ATVL--EGTWERIGAGFRTALTTALERTDEW--GGGPDSKPLNEVETLRRCAD- 109
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY----RDGIVFLSMRGACSGCPSASETLKY 170
E++ V A GG I + V ++MRGAC GCP+A TL
Sbjct: 110 --------ELIGGPVGAVAAMHGGSIELVDVSVGDEERRVDVTMRGACRGCPAAIMTLHQ 161
Query: 171 GVANILNHFVPEVKDIRTV 189
+ L+ + E +R +
Sbjct: 162 RLERQLSLRLREPVTVREI 180
>gi|268680559|ref|YP_003304990.1| nitrogen-fixing NifU domain protein [Sulfurospirillum deleyianum
DSM 6946]
gi|268618590|gb|ACZ12955.1| nitrogen-fixing NifU domain protein [Sulfurospirillum deleyianum
DSM 6946]
Length = 93
Score = 67.5 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
SD + +++ L+ +++P +A DGG + G + G VF+ ++GAC GCPS+ +TL
Sbjct: 1 MIPFSDEELRPAVEKSLE-KIKPMLALDGGGLTLLGIKKGRVFVQLQGACQGCPSSGQTL 59
Query: 169 KYGVANILNHFV-PEVKDI 186
KYG+ L + PE++ +
Sbjct: 60 KYGIERQLRIDIHPELEVV 78
>gi|224418982|ref|ZP_03656988.1| NifU-like protein [Helicobacter canadensis MIT 98-5491]
gi|253827929|ref|ZP_04870814.1| NifU-like protein [Helicobacter canadensis MIT 98-5491]
gi|313142494|ref|ZP_07804687.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253511335|gb|EES89994.1| NifU-like protein [Helicobacter canadensis MIT 98-5491]
gi|313131525|gb|EFR49142.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 326
Score = 67.5 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIKE---VLDNRVRPAVARDGGDIVFKGYRDG-- 148
K D GD +D +VQ+IK ++D ++RP + DGG++ ++
Sbjct: 223 EEEALKNKADLESKGDLKFADMTLVQKIKAIESLIDEKIRPMLMMDGGNMEIIELKNSSD 282
Query: 149 ---IVFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GACSGC S + + + ++L
Sbjct: 283 GYTDVYIRYLGACSGCASGATGTLFAIESVLQE 315
>gi|330960949|gb|EGH61209.1| yhgI protein [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 197
Score = 67.5 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG----IVFLSMRGACSGCPSAS 165
+ +DS + +RI L + P +A GG + + I L G C GC A
Sbjct: 103 MVNADSPINERINYYLQTEINPGLASHGGQVSLIDVVEEEAKHIAVLQFGGGCQGCGQAD 162
Query: 166 ETLKYGVANILNHFVPEVKDIRTV 189
TLK G+ L +PE+ +R V
Sbjct: 163 VTLKEGIERTLLERIPELSGVRDV 186
>gi|192293449|ref|YP_001994054.1| Fe-S cluster assembly protein NifU [Rhodopseudomonas palustris
TIE-1]
gi|192287198|gb|ACF03579.1| Fe-S cluster assembly protein NifU [Rhodopseudomonas palustris
TIE-1]
Length = 328
Score = 67.1 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
D ++ + + ++E+ RP + RDGGD F IV++ + G C GC +S TL
Sbjct: 253 DAPPQEALIAEAVEEL-----RPHLQRDGGDCEFVSLDGNIVYVRLSGNCVGCQLSSVTL 307
Query: 169 KYGVANILNHFVPEVKDIRTV 189
GV L + V
Sbjct: 308 -SGVQAKLVEKFGRPLRVVPV 327
>gi|39937667|ref|NP_949943.1| putative nifU protein [Rhodopseudomonas palustris CGA009]
gi|39651526|emb|CAE30049.1| putative nifU protein [Rhodopseudomonas palustris CGA009]
Length = 328
Score = 67.1 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
D ++ + + ++E+ RP + RDGGD F IV++ + G C GC +S TL
Sbjct: 253 DAPPQEALIAEAVEEL-----RPHLQRDGGDCEFVSLDGNIVYVRLSGNCVGCQLSSVTL 307
Query: 169 KYGVANILNHFVPEVKDIRTV 189
GV L + V
Sbjct: 308 -SGVQAKLVEKFGRPLRVVPV 327
>gi|34558480|ref|NP_908295.1| NIFU-like protein [Wolinella succinogenes DSM 1740]
gi|34484199|emb|CAE11195.1| NIFU-LIKE PROTEIN [Wolinella succinogenes]
Length = 327
Score = 67.1 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYR---D 147
+ + D SG+ ++ ++VQ++K +V+D+ +RP + DGG++ R D
Sbjct: 224 DDEKLKTQADKSASGELGFNEMSMVQKVKAVDKVIDDNIRPMLMMDGGNMEVIDIRSSSD 283
Query: 148 G--IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
G +++ GAC+GC S+S + + ++L + + V
Sbjct: 284 GHTDIYIRYVGACAGCASSSTGTLFAIESVLQQKLDSSIRVFPV 327
>gi|254785693|ref|YP_003073122.1| Fe-S cluster assembly protein NifU [Teredinibacter turnerae T7901]
gi|237687387|gb|ACR14651.1| Fe-S cluster assembly protein NifU [Teredinibacter turnerae T7901]
Length = 317
Score = 67.1 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ I++ LD +RP + RD GD+ +++ + GACSGC A+ T+ G+ L
Sbjct: 237 IKVIEKALDE-IRPTLQRDHGDVELLDVDGKNIYIKLIGACSGCQLATATV-GGIQQKLM 294
Query: 178 HFVPEVKDIRTV 189
+ E + V
Sbjct: 295 EALGEFVKVTPV 306
>gi|295131200|ref|YP_003581863.1| NifU-like protein [Propionibacterium acnes SK137]
gi|291377366|gb|ADE01221.1| NifU-like protein [Propionibacterium acnes SK137]
gi|313773265|gb|EFS39231.1| NifU-like domain protein [Propionibacterium acnes HL074PA1]
gi|313812071|gb|EFS49785.1| NifU-like domain protein [Propionibacterium acnes HL083PA1]
gi|313829868|gb|EFS67582.1| NifU-like domain protein [Propionibacterium acnes HL007PA1]
gi|313834710|gb|EFS72424.1| NifU-like domain protein [Propionibacterium acnes HL056PA1]
gi|314974018|gb|EFT18114.1| NifU-like domain protein [Propionibacterium acnes HL053PA1]
gi|314975444|gb|EFT19539.1| NifU-like domain protein [Propionibacterium acnes HL045PA1]
gi|314984204|gb|EFT28296.1| NifU-like domain protein [Propionibacterium acnes HL005PA1]
gi|315097782|gb|EFT69758.1| NifU-like domain protein [Propionibacterium acnes HL038PA1]
gi|327325393|gb|EGE67198.1| hypothetical protein HMPREF9338_02623 [Propionibacterium acnes
HL096PA2]
gi|327443686|gb|EGE90340.1| NifU-like domain protein [Propionibacterium acnes HL043PA1]
gi|327449223|gb|EGE95877.1| NifU-like domain protein [Propionibacterium acnes HL043PA2]
gi|328761035|gb|EGF74587.1| hypothetical protein HMPREF9343_01274 [Propionibacterium acnes
HL099PA1]
Length = 180
Score = 67.1 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 67/199 (33%), Gaps = 41/199 (20%)
Query: 3 IQTEDTPNPATLKFIP--------GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASV 54
+ E T +PATL+++ G +V G F N E + + +V
Sbjct: 11 VHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEAT-----------VGAV 59
Query: 55 YFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD 114
TV + WE + + D + +
Sbjct: 60 M-----ATVL--EGTWERIGAGFRTALTTALERTDEWVGG-----------PDSKPLNDV 101
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY----RDGIVFLSMRGACSGCPSASETLKY 170
+ + E++ V A GG I + V ++M+GAC GCP+A TL
Sbjct: 102 ETLRRCADELIGGPVGVVAAMHGGSIELVDVSVGDEERRVDVTMKGACRGCPAAIMTLHQ 161
Query: 171 GVANILNHFVPEVKDIRTV 189
+ + L+ + E +R +
Sbjct: 162 RLEHQLSLRLREPVTVREI 180
>gi|313835870|gb|EFS73584.1| NifU-like domain protein [Propionibacterium acnes HL037PA2]
gi|314927130|gb|EFS90961.1| NifU-like domain protein [Propionibacterium acnes HL044PA1]
gi|314970772|gb|EFT14870.1| NifU-like domain protein [Propionibacterium acnes HL037PA3]
Length = 181
Score = 67.1 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 65/199 (32%), Gaps = 41/199 (20%)
Query: 3 IQTEDTPNPATLKFIP--------GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASV 54
+ E T +PATL+++ G +V G F N E + + +V
Sbjct: 12 VHPETTADPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEAT-----------VGAV 60
Query: 55 YFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD 114
TV + W + + D + +
Sbjct: 61 M-----ATVL--EGTWGRIGAGFRTALTTALERTDEWVGG-----------PDSQPLNEV 102
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY----RDGIVFLSMRGACSGCPSASETLKY 170
+ + E++ V A GG I ++ V ++M+GAC GCP+A TL
Sbjct: 103 ETLRRCTDELIAGPVGAVAAMHGGSIELVDVSVDGQERRVDVAMKGACRGCPAAVMTLHQ 162
Query: 171 GVANILNHFVPEVKDIRTV 189
+ L+ + E + V
Sbjct: 163 RLERQLSLRLHEQVTVHEV 181
>gi|242310610|ref|ZP_04809765.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239523008|gb|EEQ62874.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 326
Score = 67.1 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIKE---VLDNRVRPAVARDGGDIVFKGYRDG-- 148
K D GD +D +VQ+IK ++D ++RP + DGG++ ++
Sbjct: 223 EEESLKNKADLESKGDLKFADMTLVQKIKAIESLIDEKIRPMLMMDGGNMEIIELKNSSD 282
Query: 149 ---IVFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GACSGC S + + + ++L
Sbjct: 283 GHTDVYIRYLGACSGCASGATGTLFAIESVLQE 315
>gi|71907146|ref|YP_284733.1| Fe-S cluster assembly protein NifU [Dechloromonas aromatica RCB]
gi|71846767|gb|AAZ46263.1| Fe-S cluster assembly protein NifU [Dechloromonas aromatica RCB]
Length = 298
Score = 67.1 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +I+EVL++ VRP + RD GD+ + +++ ++GACSGC + TL G+
Sbjct: 220 EKIAKIQEVLES-VRPMLLRDHGDVELADVQGKKIYVHLKGACSGCMMEAATL-GGIQQK 277
Query: 176 LNHFVPEVKDI 186
+ + E+ +
Sbjct: 278 MIETLGELVQV 288
>gi|313837921|gb|EFS75635.1| NifU-like domain protein [Propionibacterium acnes HL086PA1]
Length = 180
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 70/200 (35%), Gaps = 43/200 (21%)
Query: 3 IQTEDTPNPATLKFIP--------GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASV 54
+ E T +PATL+++ G +V G F N E + + +V
Sbjct: 11 VHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEAT-----------VGAV 59
Query: 55 YFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD 114
TV + WE + + D + + +D
Sbjct: 60 M-----ATVL--EGTWERIGAGFRTALTTALERTDEWVGGPDSKSL------------ND 100
Query: 115 SAVVQR-IKEVLDNRVRPAVARDGGDIVFKGY----RDGIVFLSMRGACSGCPSASETLK 169
++R E++ V A GG I + V ++M+GAC GCP+A TL
Sbjct: 101 VETLRRCADELIGGPVGAVAAMHGGSIELVDVSVGDEERRVDVTMKGACRGCPAAIMTLH 160
Query: 170 YGVANILNHFVPEVKDIRTV 189
+ + L+ + E +R +
Sbjct: 161 QRLEHQLSLRLREPVTVREI 180
>gi|327450183|gb|EGE96837.1| NifU-like domain protein [Propionibacterium acnes HL013PA2]
Length = 180
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 67/199 (33%), Gaps = 41/199 (20%)
Query: 3 IQTEDTPNPATLKFIP--------GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASV 54
+ E T +PATL+++ G +V G F N E + + +V
Sbjct: 11 VHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEAT-----------VGAV 59
Query: 55 YFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD 114
TV + WE + + D + +
Sbjct: 60 M-----ATVL--EGTWERIGAGFRTALTTALERTDEWVGG-----------PDSKPLNDV 101
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY----RDGIVFLSMRGACSGCPSASETLKY 170
+ + E++ V A GG I + V ++M+GAC GCP+A TL
Sbjct: 102 ETLRRCADELIGGPVGAVAAMHGGSIELVDVSVGHEERRVDVTMKGACRGCPAAIMTLHQ 161
Query: 171 GVANILNHFVPEVKDIRTV 189
+ + L+ + E +R +
Sbjct: 162 RLEHQLSLRLREPVTVREI 180
>gi|291277316|ref|YP_003517088.1| NifU-like protein [Helicobacter mustelae 12198]
gi|290964510|emb|CBG40362.1| nifU protein homolog [Helicobacter mustelae 12198]
Length = 326
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIKEV---LDNRVRPAVARDGGDIVFKGYRDG-- 148
+ + +G+ +D +VQRIK V +++++RP + DGGD+ +D
Sbjct: 223 DAEKLKDNVQKNQNGELSFADMTMVQRIKTVDKTINDQIRPMLLMDGGDLEILDIKDSSD 282
Query: 149 ---IVFLSMRGACSGCPSASETLKYGVANILNHFV-PEVK 184
+++ GACSGC SAS + + IL + P+++
Sbjct: 283 GHFDIYIRYMGACSGCASASTGTLFAIEGILQENLDPKIR 322
>gi|39997110|ref|NP_953061.1| NifU family protein [Geobacter sulfurreducens PCA]
gi|39984000|gb|AAR35388.1| NifU family protein [Geobacter sulfurreducens PCA]
gi|298506123|gb|ADI84846.1| nitrogen fixation iron-sulfur cluster assembly protein NifU
[Geobacter sulfurreducens KN400]
Length = 285
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 6/103 (5%)
Query: 90 PIIHNGGLGDMKLDDMGSGDFIESDSAV--VQRIKEVLDNRVRPAVARDGGDIVFKGYRD 147
P I + E + + +Q I+E L+ +RP + DGGD+
Sbjct: 183 PKIKEIINEVLGAKPAEEHKRPEKLTNLRKMQLIQETLEKEIRPQLWADGGDLELIDISG 242
Query: 148 GIVFLSMRGACSGCPSASETLKYGVANILNHFVPE---VKDIR 187
V ++ R AC+GC ++ T K V L V E V ++
Sbjct: 243 SEVQIAFRKACAGCAASGNTAK-FVEMKLRELVAEDITVTEVE 284
>gi|329894923|ref|ZP_08270722.1| hypothetical protein IMCC3088_1134 [gamma proteobacterium IMCC3088]
gi|328922652|gb|EGG29987.1| hypothetical protein IMCC3088_1134 [gamma proteobacterium IMCC3088]
Length = 191
Score = 66.7 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYG 171
DS + RI +L N V PA+A GG++ D I L G C GC +TLK G
Sbjct: 103 DDSPIEDRINYILYNEVNPALAAHGGEVSLVEITEDQIAILQFGGGCQGCGMVDQTLKGG 162
Query: 172 VANILNHFVPEVKDIRTV 189
V L VPE++ +R V
Sbjct: 163 VEKSLLEQVPELRGVRDV 180
>gi|306821530|ref|ZP_07455130.1| conserved hypothetical protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550424|gb|EFM38415.1| conserved hypothetical protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 103
Score = 66.7 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
D Q+++E + + P ++ GDI K ++D IV +++ G CS CP + T + +
Sbjct: 5 DILNEQKLEEYIKINILPYISSHKGDIKIKSFKDKIVTITLLGNCSKCPLSQITFEDVIR 64
Query: 174 NILNHFVP-EVKDIR 187
L P ++ D+R
Sbjct: 65 QKLLEEFPNQIDDVR 79
>gi|327332413|gb|EGE74149.1| hypothetical protein HMPREF9344_01687 [Propionibacterium acnes
HL097PA1]
Length = 180
Score = 66.7 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 67/199 (33%), Gaps = 41/199 (20%)
Query: 3 IQTEDTPNPATLKFIP--------GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASV 54
+ E T +PATL+++ G +V G F N E + + +V
Sbjct: 11 VHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEAT-----------VGAV 59
Query: 55 YFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD 114
TV + WE + + D + +
Sbjct: 60 M-----ATVL--EGTWERIGAGFRTALTTALERTDEWVGG-----------PDSKLLNDV 101
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY----RDGIVFLSMRGACSGCPSASETLKY 170
+ + E++ V A GG I + V ++M+GAC GCP+A TL
Sbjct: 102 ETLRRCADELIGGPVGAIAAMHGGSIELVDVSVGDEERRVDVTMKGACRGCPAAIMTLHQ 161
Query: 171 GVANILNHFVPEVKDIRTV 189
+ + L+ + E +R +
Sbjct: 162 RLEHQLSLRLREPITVREI 180
>gi|1709290|sp|Q10373|NIFU2_RHOCA RecName: Full=Nitrogen fixation protein nifU 2
gi|46075|emb|CAA44879.1| nifUII [Rhodobacter capsulatus]
gi|249288|gb|AAA08742.1| NifU2 [Rhodobacter capsulatus]
Length = 142
Score = 66.7 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 10/80 (12%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL-- 168
E ++AVV L +RP RDGGDI G V + + G+C+GC ++ TL
Sbjct: 66 PEEEAAVVAE----LIAEMRPMFQRDGGDIELIGLTGATVQVRLSGSCAGCMMSARTLST 121
Query: 169 --KYGVANILN--HFVPEVK 184
+ + VPE++
Sbjct: 122 VQHQLIETLGRPVRVVPEIR 141
>gi|313823479|gb|EFS61193.1| NifU-like domain protein [Propionibacterium acnes HL036PA2]
Length = 180
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 67/199 (33%), Gaps = 41/199 (20%)
Query: 3 IQTEDTPNPATLKFIP--------GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASV 54
+ E T +PATL+++ G +V G F N E + + +V
Sbjct: 11 VHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEAT-----------VGAV 59
Query: 55 YFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD 114
TV + WE + + D + +
Sbjct: 60 M-----ATVL--EGTWERIGAGFRTALTTALERTDEWVGG-----------PDSKPLNDV 101
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY----RDGIVFLSMRGACSGCPSASETLKY 170
+ + E++ V A GG I + V ++M+GAC GCP+A TL
Sbjct: 102 ETLRRCADELIGGPVGAGAAMHGGSIELVDVSVGDEERRVDVTMKGACRGCPAAIMTLHQ 161
Query: 171 GVANILNHFVPEVKDIRTV 189
+ + L+ + E +R +
Sbjct: 162 RLEHQLSLRLREPVTVREI 180
>gi|313793452|gb|EFS41503.1| NifU-like domain protein [Propionibacterium acnes HL110PA1]
gi|313801149|gb|EFS42412.1| NifU-like domain protein [Propionibacterium acnes HL110PA2]
gi|313808498|gb|EFS46963.1| NifU-like domain protein [Propionibacterium acnes HL087PA2]
gi|313812341|gb|EFS50055.1| NifU-like domain protein [Propionibacterium acnes HL025PA1]
gi|313819233|gb|EFS56947.1| NifU-like domain protein [Propionibacterium acnes HL046PA2]
gi|313821095|gb|EFS58809.1| NifU-like domain protein [Propionibacterium acnes HL036PA1]
gi|313827018|gb|EFS64732.1| NifU-like domain protein [Propionibacterium acnes HL063PA1]
gi|314925920|gb|EFS89751.1| NifU-like domain protein [Propionibacterium acnes HL036PA3]
gi|314960895|gb|EFT04996.1| NifU-like domain protein [Propionibacterium acnes HL002PA2]
gi|314963341|gb|EFT07441.1| NifU-like domain protein [Propionibacterium acnes HL082PA1]
gi|314988441|gb|EFT32532.1| NifU-like domain protein [Propionibacterium acnes HL005PA2]
gi|314988640|gb|EFT32731.1| NifU-like domain protein [Propionibacterium acnes HL005PA3]
gi|315079379|gb|EFT51377.1| NifU-like domain protein [Propionibacterium acnes HL053PA2]
gi|315080004|gb|EFT51980.1| NifU-like domain protein [Propionibacterium acnes HL078PA1]
gi|315083405|gb|EFT55381.1| NifU-like domain protein [Propionibacterium acnes HL027PA2]
gi|315086800|gb|EFT58776.1| NifU-like domain protein [Propionibacterium acnes HL002PA3]
gi|315089447|gb|EFT61423.1| NifU-like domain protein [Propionibacterium acnes HL072PA1]
gi|327328268|gb|EGE70032.1| hypothetical protein HMPREF9337_01932 [Propionibacterium acnes
HL096PA3]
gi|327451247|gb|EGE97901.1| NifU-like domain protein [Propionibacterium acnes HL092PA1]
gi|328756761|gb|EGF70377.1| NifU-like domain protein [Propionibacterium acnes HL020PA1]
Length = 180
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 67/199 (33%), Gaps = 41/199 (20%)
Query: 3 IQTEDTPNPATLKFIP--------GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASV 54
+ E T +PATL+++ G +V G F N E + + +V
Sbjct: 11 VHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEAT-----------VGAV 59
Query: 55 YFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD 114
TV + WE + + D + +
Sbjct: 60 M-----ATVL--EGTWERIGAGFRTALTTALERTDEWVGG-----------PDSKPLNDV 101
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY----RDGIVFLSMRGACSGCPSASETLKY 170
+ + E++ V A GG I + V ++M+GAC GCP+A TL
Sbjct: 102 ETLRRCADELIGGPVGAVAAMHGGSIELVDVSVGDEERRVDVTMKGACRGCPAAIMTLHQ 161
Query: 171 GVANILNHFVPEVKDIRTV 189
+ + L+ + E +R +
Sbjct: 162 RLEHQLSLRLREPVTVREI 180
>gi|289427806|ref|ZP_06429515.1| NifU-like protein [Propionibacterium acnes J165]
gi|289158988|gb|EFD07183.1| NifU-like protein [Propionibacterium acnes J165]
Length = 181
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 67/199 (33%), Gaps = 41/199 (20%)
Query: 3 IQTEDTPNPATLKFIP--------GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASV 54
+ E T +PATL+++ G +V G F N E + + +V
Sbjct: 12 VHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEAT-----------VGAV 60
Query: 55 YFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD 114
TV + WE + + D + +
Sbjct: 61 M-----ATVL--EGTWERIGAGFRTALTTALERTDEWVGG-----------PDSKPLNDV 102
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY----RDGIVFLSMRGACSGCPSASETLKY 170
+ + E++ V A GG I + V ++M+GAC GCP+A TL
Sbjct: 103 ETLRRCADELIGGPVGAVAAMHGGSIELVDVSVGDEERRVDVTMKGACRGCPAAIMTLHQ 162
Query: 171 GVANILNHFVPEVKDIRTV 189
+ + L+ + E +R +
Sbjct: 163 RLEHQLSLRLREPVTVREI 181
>gi|124506976|ref|XP_001352085.1| Fe-S-cluster redox enzyme, putative [Plasmodium falciparum 3D7]
gi|23505114|emb|CAD51896.1| Fe-S-cluster redox enzyme, putative [Plasmodium falciparum 3D7]
Length = 247
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 15/77 (19%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 104 DMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPS 163
+ G + E + V+++ ++ RP + D GD+ ++ +++ + G C C S
Sbjct: 77 ENDEGLYYELNPENVEKVLNLI----RPKLQIDNGDVELVDIKNNDLYIRLLGNCVTCSS 132
Query: 164 ASETLKYGVANILNHFV 180
S T+ + + L ++
Sbjct: 133 NSITVSHVIKKTLKMYI 149
>gi|332676077|gb|AEE72893.1| hypothetical protein PAZ_c17480 [Propionibacterium acnes 266]
Length = 181
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 67/199 (33%), Gaps = 41/199 (20%)
Query: 3 IQTEDTPNPATLKFIP--------GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASV 54
+ E T +PATL+++ G +V G F N E + + +V
Sbjct: 12 VHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQIRVEAT-----------VGAV 60
Query: 55 YFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD 114
TV + WE + + D + +
Sbjct: 61 M-----ATVL--EGTWERIGAGFRTALTTALERTDEWVGG-----------PDSKPLNDV 102
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY----RDGIVFLSMRGACSGCPSASETLKY 170
+ + E++ V A GG I + V ++M+GAC GCP+A TL
Sbjct: 103 ETLRRCADELIGGPVGAVAAMHGGSIELVDVSVGDEERRVDVTMKGACRGCPAAIMTLHQ 162
Query: 171 GVANILNHFVPEVKDIRTV 189
+ + L+ + E +R +
Sbjct: 163 RLEHQLSLRLREPVTVREI 181
>gi|95928565|ref|ZP_01311312.1| nitrogen-fixing NifU-like [Desulfuromonas acetoxidans DSM 684]
gi|95135355|gb|EAT17007.1| nitrogen-fixing NifU-like [Desulfuromonas acetoxidans DSM 684]
Length = 323
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDG------IVFLSMRGACSGCPSASETLKYG 171
V+ I+ VLD VRPA+A DGG I + G V + +GAC GC +
Sbjct: 246 VKEIEAVLDRHVRPALAGDGGGIELDDVQPGENDGQVYVHVKYKGACKGCAGSVAGTLGF 305
Query: 172 VANILNHFVPEVKDI 186
V +L + E +
Sbjct: 306 VQTMLQENLSEAIRV 320
>gi|322378956|ref|ZP_08053370.1| NifU-like protein [Helicobacter suis HS1]
gi|322379810|ref|ZP_08054107.1| iron-sulfur cluster assembly scaffold protein [Helicobacter suis
HS5]
gi|321147778|gb|EFX42381.1| iron-sulfur cluster assembly scaffold protein [Helicobacter suis
HS5]
gi|321148632|gb|EFX43118.1| NifU-like protein [Helicobacter suis HS1]
Length = 326
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIKEV---LDNRVRPAVARDGGDIVFKGYRDG-- 148
GD + +VQ++K + +D VRP + DGG++ ++G
Sbjct: 224 EAEKRKEVAQKSLEGDLAFQEMTMVQKVKAIDKTIDAHVRPMLMMDGGNLEILDIKEGGG 283
Query: 149 --IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
V++ GAC GC SA+ + + +L + E + +
Sbjct: 284 FVDVYIRYMGACDGCASAASGTLFAIEGVLQDQLDEHIRVLPI 326
>gi|224438068|ref|ZP_03659007.1| NifU-like protein [Helicobacter cinaedi CCUG 18818]
gi|313144512|ref|ZP_07806705.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313129543|gb|EFR47160.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 324
Score = 66.4 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 89 DPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGY 145
+ MK GD ++ +VQ++K +V+D +RP + DGGD+
Sbjct: 216 AEVRAEMDKESMKKVADKGGDIAFAEMTMVQKVKAIDKVIDANIRPMLMMDGGDMEILDI 275
Query: 146 RDG-----IVFLSMRGACSGCPSASETLKYGVANILNH 178
+D V++ GACSGC S + Y + ++L
Sbjct: 276 KDTSDGFIDVYIRYLGACSGCASGATGTLYAIESVLQE 313
>gi|294944201|ref|XP_002784137.1| hypothetical protein Pmar_PMAR003391 [Perkinsus marinus ATCC 50983]
gi|239897171|gb|EER15933.1| hypothetical protein Pmar_PMAR003391 [Perkinsus marinus ATCC 50983]
Length = 345
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSGCPSASETLKYGVAN 174
VQ++ LD VRP +A DGG + G D G V + GACS C + + KYG+ +
Sbjct: 188 PTVQQVDRALD-AVRPGLAMDGGGVRVLGVEDDGRVRVLFTGACSSCALSDTSTKYGLWD 246
Query: 175 ILNHFVPEVKDIRTV 189
+L+ P + I TV
Sbjct: 247 VLSSKFPVLTSIETV 261
>gi|198282439|ref|YP_002218760.1| nitrogen-fixing NifU domain-containing protein [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|198246960|gb|ACH82553.1| nitrogen-fixing NifU domain protein [Acidithiobacillus ferrooxidans
ATCC 53993]
Length = 127
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 106 GSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSAS 165
G D + +AV + ++ V R + RDGGDI + V + M+GAC+GCP+A
Sbjct: 49 GPDDPLPDPAAVAEAVQTV-----RHILHRDGGDIELVEIIERDVRVRMKGACAGCPNAV 103
Query: 166 ETLKYGVANILNHFVPEVKDI 186
LK V I+ VP V ++
Sbjct: 104 IDLKQVVERIVG-AVPGVVNV 123
>gi|218667291|ref|YP_002424638.1| NifU domain protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218519504|gb|ACK80090.1| NifU domain protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 130
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 106 GSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSAS 165
G D + +AV + ++ V R + RDGGDI + V + M+GAC+GCP+A
Sbjct: 52 GPDDPLPDPAAVAEAVQTV-----RHILHRDGGDIELVEIIERDVRVRMKGACAGCPNAV 106
Query: 166 ETLKYGVANILNHFVPEVKDI 186
LK V I+ VP V ++
Sbjct: 107 IDLKQVVERIVG-AVPGVVNV 126
>gi|84999846|ref|XP_954644.1| Nifu-like protein [Theileria annulata]
gi|65305642|emb|CAI73967.1| Nifu-like protein, putative [Theileria annulata]
Length = 150
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 93 HNGGLGDMKLDDMGSGDFIES---DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI 149
+ K D+ ++ E + +++V D +RP ++ DGG I D
Sbjct: 45 EPKDSSEYKPKDIEQTEYDEEGWLMDLNTKNVEDVFD-LIRPQLSSDGGGINLCKIVDNE 103
Query: 150 VFLSMRGACSGCPSASETLKYGVANILNHFV 180
+++ G+C GCP S TLK + + L F+
Sbjct: 104 IYVKFTGSCVGCPYRSTTLKELIESNLVKFI 134
>gi|152991603|ref|YP_001357324.1| hypothetical protein SUN_0006 [Sulfurovum sp. NBC37-1]
gi|151423464|dbj|BAF70967.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 324
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Query: 89 DPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEV---LDNRVRPAVARDGGDIVFKGY 145
+ L + G D +VQ+IK V +D +R + DGGD+
Sbjct: 217 EEYEKEKMSAAATLGNEGGSTGAFKDMTIVQKIKAVDKTVDENIRQMLIMDGGDMEILDI 276
Query: 146 RDG----IVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+D +++ GAC+GC SAS + + NIL +
Sbjct: 277 KDNGENIDIYIRYLGACNGCASASTGTLFAIENILKEKL 315
>gi|123468395|ref|XP_001317416.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
gi|121900149|gb|EAY05193.1| NifU-like domain containing protein [Trichomonas vaginalis G3]
Length = 65
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 26/48 (54%)
Query: 135 RDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
DGGDIV K DGIV + + G CSGCPS TL G+ L E
Sbjct: 1 MDGGDIVLKDITDGIVSVQLMGHCSGCPSRRNTLNAGILGCLQEEFGE 48
>gi|108562648|ref|YP_626964.1| nifU-like protein [Helicobacter pylori HPAG1]
gi|107836421|gb|ABF84290.1| nifU-like protein [Helicobacter pylori HPAG1]
Length = 326
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ +G+ + +VQ+IK +V+D +R + DGGD+ ++
Sbjct: 224 EAEKLKAAANKSQNGELAFREMTMVQKIKAVDKVIDENIRAMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|317010501|gb|ADU84248.1| nifU-like protein [Helicobacter pylori SouthAfrica7]
Length = 326
Score = 66.0 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ +G+ + +VQ+IK +V+D +R + DGGD+ ++
Sbjct: 224 EAEKLKAAANKSQNGELAFREMTMVQKIKAVDKVIDENIRAMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|32266062|ref|NP_860094.1| NifU-like protein [Helicobacter hepaticus ATCC 51449]
gi|32262111|gb|AAP77160.1| NifU-like protein [Helicobacter hepaticus ATCC 51449]
Length = 326
Score = 66.0 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETLKYGV 172
V+ I +++D +RP + DGGD+ +D V++ GACSGC S + Y +
Sbjct: 250 VKSIDKIIDENIRPMLMMDGGDMEILDIKDTSDGFIDVYIRYLGACSGCASGATGTLYAI 309
Query: 173 ANILNHFV 180
++L +
Sbjct: 310 ESVLQEKL 317
>gi|237750884|ref|ZP_04581364.1| predicted protein [Helicobacter bilis ATCC 43879]
gi|229373329|gb|EEO23720.1| predicted protein [Helicobacter bilis ATCC 43879]
Length = 324
Score = 66.0 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI 140
+++ + + + + V+ I +V+D +RP + DGGD+
Sbjct: 211 LVDILAQVRAEMDKESVKKVADKGSEIAFAQMTMVQKVKAIDKVIDANIRPMLMMDGGDM 270
Query: 141 VFKGYRDG-----IVFLSMRGACSGCPSASETLKYGVANILNH 178
+D V++ GACSGC S + Y + ++L
Sbjct: 271 EILDIKDTSDGFIDVYIRYLGACSGCASGATGTLYAIESVLQE 313
>gi|254457488|ref|ZP_05070916.1| nitrogen fixation protein NifU [Campylobacterales bacterium GD 1]
gi|207086280|gb|EDZ63564.1| nitrogen fixation protein NifU [Campylobacterales bacterium GD 1]
Length = 324
Score = 65.6 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 4/104 (3%)
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI 140
+++ + + + ++ + V+D VR + DGGD+
Sbjct: 212 LVDILADTRKEMDEEKMKAAADAGASGDFASMTLVQQIKAVDAVIDESVRQFLVMDGGDM 271
Query: 141 VFKGYRDGI----VFLSMRGACSGCPSASETLKYGVANILNHFV 180
+ G +++ GAC+GC S+S Y + + L +
Sbjct: 272 EVIDIKKGDEYIDIYIRYLGACNGCASSSTGTLYAIESTLKEKL 315
>gi|78222211|ref|YP_383958.1| Fe-S cluster assembly protein NifU [Geobacter metallireducens
GS-15]
gi|78193466|gb|ABB31233.1| Fe-S cluster assembly protein NifU [Geobacter metallireducens
GS-15]
Length = 286
Score = 65.6 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q I+E L+ +RP + DGGD+ V ++ R AC+GC S+ T K V L
Sbjct: 214 MQLIQETLEKEIRPLLWADGGDLELVDISGSEVQIAFRKACAGCASSGNTAK-FVELKLR 272
Query: 178 HFVPE---VKDIR 187
V + V+++
Sbjct: 273 DLVADDIVVQEVE 285
>gi|317013664|gb|ADU81100.1| nifU-like protein [Helicobacter pylori Gambia94/24]
Length = 326
Score = 65.6 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ +G+ + +VQ+IK +V+D +R + DGGD+ ++
Sbjct: 224 EAEKLKATANKSQNGELAFREMTMVQKIKAVDKVIDENIRAMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|15611277|ref|NP_222928.1| nifU-like protein [Helicobacter pylori J99]
gi|4154728|gb|AAD05790.1| putative [Helicobacter pylori J99]
Length = 326
Score = 65.6 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ +G+ + +VQ+IK +V+D +R + DGGD+ ++
Sbjct: 224 EAEKLKATANKSQNGELAFREMTMVQKIKAVDKVIDENIRAMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|294676126|ref|YP_003576741.1| nitrogen fixation protein NifU [Rhodobacter capsulatus SB 1003]
gi|294474946|gb|ADE84334.1| nitrogen fixation protein NifU-1 [Rhodobacter capsulatus SB 1003]
Length = 142
Score = 65.6 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL--- 168
E ++AVV L +RP RDGGDI G V + + G+C+GC ++ TL
Sbjct: 67 EEEAAVVAE----LIAEMRPMFQRDGGDIELIGLTGATVQVRLSGSCAGCMMSARTLSTV 122
Query: 169 -KYGVANILN--HFVPEVK 184
+ + VPE++
Sbjct: 123 QHQLIETLGRPVRVVPEIR 141
>gi|307636912|gb|ADN79362.1| iron-sulfur cluster assembly scaffold protein [Helicobacter pylori
908]
gi|325995502|gb|ADZ50907.1| IscU/NifU-like protein [Helicobacter pylori 2018]
gi|325997100|gb|ADZ49308.1| nifU like protein [Helicobacter pylori 2017]
Length = 326
Score = 65.6 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ +G+ + +VQ+IK +V+D +R + DGGD+ ++
Sbjct: 224 EAEKLKATANKSQNGELAFREMTMVQKIKAVDKVIDENIRTMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|208434169|ref|YP_002265835.1| nifU-like protein [Helicobacter pylori G27]
gi|308184024|ref|YP_003928157.1| nifU-like protein [Helicobacter pylori SJM180]
gi|208432098|gb|ACI26969.1| nifU-like protein [Helicobacter pylori G27]
gi|308059944|gb|ADO01840.1| nifU-like protein [Helicobacter pylori SJM180]
Length = 326
Score = 65.6 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ +G+ + +VQ+IK +V+D +R + DGGD+ ++
Sbjct: 224 EAEKLKATANKSQNGELAFREMTMVQKIKAVDKVIDENIRAMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|308182394|ref|YP_003926521.1| nifU-like protein [Helicobacter pylori PeCan4]
gi|308064579|gb|ADO06471.1| nifU-like protein [Helicobacter pylori PeCan4]
Length = 326
Score = 65.6 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ +G+ + +VQ+IK +V+D +R + DGGD+ ++
Sbjct: 224 EAEKLKATANKSQNGELAFREMTMVQKIKAVDKVIDENIRAMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|317008870|gb|ADU79450.1| nifU-like protein [Helicobacter pylori India7]
Length = 326
Score = 65.6 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ +G+ + +VQ+IK +V+D +R + DGGD+ ++
Sbjct: 224 EAEKLKATANKSQNGELAFREMTMVQKIKAVDKVIDENIRAMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|34540487|ref|NP_904966.1| NifU-like protein [Porphyromonas gingivalis W83]
gi|188994590|ref|YP_001928842.1| hypothetical protein PGN_0726 [Porphyromonas gingivalis ATCC 33277]
gi|34396800|gb|AAQ65865.1| NifU-related protein [Porphyromonas gingivalis W83]
gi|188594270|dbj|BAG33245.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
33277]
Length = 94
Score = 65.6 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ ++ VL R+ P + GGD+ +D VF+ GAC CP+A ET++ V ++
Sbjct: 2 TEEIVELVLRERISPLLRSHGGDLSLSQIKDKTVFVRFSGACRFCPAAHETVEKIVQAMI 61
Query: 177 NHF 179
+
Sbjct: 62 REY 64
>gi|157164931|ref|YP_001466051.1| acetolactate synthase small subunit [Campylobacter concisus 13826]
gi|112801226|gb|EAT98570.1| NifU family protein [Campylobacter concisus 13826]
Length = 330
Score = 65.6 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 95 GGLGDMKLDDMGSGDFIESDSAV--VQRIKEVLDNRVRPAVARDGGDIVFKGYRDG---- 148
+ + ++ S ES + V ++ I+ ++D +RP + DGG++ R+
Sbjct: 229 EAQANAQANNTLSDVSFESMTMVGQLKAIESIIDKEIRPMLMMDGGNLEILDIRNDNGEN 288
Query: 149 -IVFLSMRGACSGCPS-ASETLKYGVANILNH 178
V++ GACSGC S ++ TL Y + N+L
Sbjct: 289 IDVYIRYLGACSGCSSGSTGTL-YAIENVLQE 319
>gi|91975564|ref|YP_568223.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris BisB5]
gi|91682020|gb|ABE38322.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris BisB5]
Length = 331
Score = 65.2 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
I E LD +RP + RDGGD +V++ + G C GC +S TL GV L
Sbjct: 264 IAEALDE-LRPHLKRDGGDCELVNVEGNVVYVRLSGNCVGCQLSSLTL-SGVQARL 317
>gi|253583865|ref|ZP_04861063.1| predicted protein [Fusobacterium varium ATCC 27725]
gi|251834437|gb|EES63000.1| predicted protein [Fusobacterium varium ATCC 27725]
Length = 92
Score = 65.2 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDG--IVFLSMRGACSGCPSASETLKYGVANI 175
+++I++ LD +RP + + GDI + Y + + L + G C CP + +T + +
Sbjct: 1 MEKIEKFLDEEIRPELQKHNGDISIEEYDEKSKKLVLRLMGQCCTCPHSIDTTENFIKVS 60
Query: 176 LNHFVPEVK 184
+ PE++
Sbjct: 61 IKEKFPEIE 69
>gi|152989911|ref|YP_001355633.1| hypothetical protein NIS_0161 [Nitratiruptor sp. SB155-2]
gi|151421772|dbj|BAF69276.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 98
Score = 65.2 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG----IVFLSMRGACSGCPSASETLKY 170
I++ +D +R + DGG++ ++ V++ GAC GC SA+ +
Sbjct: 19 EEKWNAIEKAIDEGIRQFLVMDGGNLEIIDIKENGDFIDVYIRYMGACVGCASATTGTLF 78
Query: 171 GVANILNHFVPE 182
G+ + L + E
Sbjct: 79 GIEHTLRERLGE 90
>gi|198283350|ref|YP_002219671.1| Fe-S cluster assembly protein NifU [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218667946|ref|YP_002425936.1| nitrogen fixation protein nifU [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198247871|gb|ACH83464.1| Fe-S cluster assembly protein NifU [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218520159|gb|ACK80745.1| nitrogen fixation protein nifU [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 291
Score = 65.2 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+Q+I V+D +RP DGG+I V ++M G+C C S+ T+ G+ L
Sbjct: 214 IQKISAVIDE-MRPQFQMDGGNIELVDVDGDTVMVAMSGSCMNCQSSGITI-SGIQERLM 271
>gi|70941449|ref|XP_741011.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519117|emb|CAH80372.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 236
Score = 65.2 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 103 DDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCP 162
+ + E + +++ ++ RP + D GD+ + +++ + G C C
Sbjct: 65 EKQDEELYYELNPENTEKVLNLI----RPKLQIDNGDVELVDIKGNDLYIRLLGNCVTCS 120
Query: 163 SASETLKYGVANILNHFV 180
S S T+ + L ++
Sbjct: 121 SNSVTISQVIKKTLKMYI 138
>gi|294678787|ref|YP_003579402.1| nitrogen fixation protein NifU [Rhodobacter capsulatus SB 1003]
gi|1709289|sp|Q07178|NIFU1_RHOCA RecName: Full=Nitrogen fixation protein nifU 1
gi|297917|emb|CAA48486.1| nifU (copyI) [Rhodobacter capsulatus]
gi|294477607|gb|ADE86995.1| nitrogen fixation protein NifU-2 [Rhodobacter capsulatus SB 1003]
Length = 135
Score = 65.2 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 9/74 (12%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
V RI+ ++D +RP RDGGDI V + + GAC+GC A +TL YGV +
Sbjct: 63 VTRIRALIDE-MRPTFRRDGGDIELVRVEGAKVIVHLSGACAGCMLAGQTL-YGVQKRIT 120
Query: 178 -------HFVPEVK 184
+P+++
Sbjct: 121 DVLGRPFRVIPDIR 134
>gi|315639387|ref|ZP_07894549.1| NifU family protein [Campylobacter upsaliensis JV21]
gi|315480713|gb|EFU71355.1| NifU family protein [Campylobacter upsaliensis JV21]
Length = 323
Score = 64.8 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI 140
+++ + L + DD+ + ++ ++ VLD +RP + DGGD+
Sbjct: 212 LVDILAQTRAEMDKERLKNSTKDDVAFDEMTMVGQ--LKAVEAVLDAEIRPMLQGDGGDM 269
Query: 141 VFKGY---RDG--IVFLSMRGACSGCPS-ASETLKYGVANILNHFV-PEVKDIRTV 189
G +++ GACSGC S + TL Y + +IL + P ++ + V
Sbjct: 270 EVIDIQKAEGGAIDIYIRYLGACSGCSSGSGATL-YAIESILQEELSPNIR-VMPV 323
>gi|323138472|ref|ZP_08073541.1| Fe-S cluster assembly protein NifU [Methylocystis sp. ATCC 49242]
gi|322396268|gb|EFX98800.1| Fe-S cluster assembly protein NifU [Methylocystis sp. ATCC 49242]
Length = 323
Score = 64.8 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V+ I+E ++ +RP + +DGGD V +++ GAC GC +S T+ G+ L
Sbjct: 249 VRLIEEAIEE-LRPYLQKDGGDCELIDVDGSNVLVTLSGACMGCQMSSVTV-SGIQERL 305
>gi|217032835|ref|ZP_03438315.1| hypothetical protein HPB128_176g13 [Helicobacter pylori B128]
gi|298736836|ref|YP_003729366.1| hypothetical protein HPB8_1345 [Helicobacter pylori B8]
gi|216945460|gb|EEC24122.1| hypothetical protein HPB128_176g13 [Helicobacter pylori B128]
gi|298356030|emb|CBI66902.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 326
Score = 64.8 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ + +G+ + +VQ+IK +V+D +R + DGGD+ ++
Sbjct: 224 EAEKLKVTANKSQNGELAFREMTMVQKIKAVDKVIDENIRAMLMMDGGDLEILDIKESDD 283
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GAC GC SA+ + + N L
Sbjct: 284 YIDVYIRYMGACDGCMSATTGTLFAIENALQE 315
>gi|170741742|ref|YP_001770397.1| Fe-S cluster assembly protein NifU [Methylobacterium sp. 4-46]
gi|168196016|gb|ACA17963.1| Fe-S cluster assembly protein NifU [Methylobacterium sp. 4-46]
Length = 329
Score = 64.8 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
++ I + ++ +RP + RDGGD +V + + GAC GC AS T+ GV L
Sbjct: 259 IRLIDKAIE-ALRPVLQRDGGDCELVEVEGTVVSVRLSGACVGCQMASVTV-AGVQQRLI 316
Query: 178 HFV 180
+
Sbjct: 317 EAL 319
>gi|314979457|gb|EFT23551.1| NifU-like domain protein [Propionibacterium acnes HL072PA2]
Length = 180
Score = 64.8 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 66/199 (33%), Gaps = 41/199 (20%)
Query: 3 IQTEDTPNPATLKFIP--------GQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASV 54
+ E T +PATL+++ G +V G F N E + + +V
Sbjct: 11 VHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEAT-----------VGAV 59
Query: 55 YFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD 114
TV + WE + + D + +
Sbjct: 60 M-----ATVL--EGTWERIGAGFRTALTTALERTDEWVGG-----------PDSKPLNDV 101
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY----RDGIVFLSMRGACSGCPSASETLKY 170
+ + E+ V A GG I + V ++M+GAC GCP+A TL
Sbjct: 102 ETLRRCADELTGGPVGAVAAMHGGSIELVDVSVGDEERRVDVTMKGACRGCPAAIMTLHQ 161
Query: 171 GVANILNHFVPEVKDIRTV 189
+ + L+ + E +R +
Sbjct: 162 RLEHQLSLRLREPVTVREI 180
>gi|255020109|ref|ZP_05292180.1| hypothetical protein ACA_0450 [Acidithiobacillus caldus ATCC 51756]
gi|254970471|gb|EET27962.1| hypothetical protein ACA_0450 [Acidithiobacillus caldus ATCC 51756]
Length = 130
Score = 64.4 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 12/111 (10%)
Query: 83 EHFISGDPIIHNGGLGDMKLDDMGSGDFIE-------SDSAVVQRIKEVLDNRVRPAVAR 135
+ + DPI+ + G E D V V VR + R
Sbjct: 21 DAIEAEDPILAAKIEHVQNMAKRQIGRKKEFSEHDPLPDPEAVAEAMAV----VRRILQR 76
Query: 136 DGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
DGGDI V + M+GAC+GCP+A L+ V I+ VP V +
Sbjct: 77 DGGDIELVEIAQRDVRVRMKGACAGCPNAVLDLQQVVERIVG-AVPGVARV 126
>gi|317128638|ref|YP_004094920.1| Scaffold protein Nfu/NifU [Bacillus cellulosilyticus DSM 2522]
gi|315473586|gb|ADU30189.1| Scaffold protein Nfu/NifU [Bacillus cellulosilyticus DSM 2522]
Length = 372
Score = 64.4 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISP-LASRIFSIPGIASVYFGYDFI 61
I E TP+P T+K Q L +G H + +E +P +F + G+ VY DFI
Sbjct: 4 ISVEPTPSPNTMKLTLSQS-LPQGKAHNYTKETSEGAPSFVQDLFKVEGVKGVYHVADFI 62
Query: 62 TVGK-DQYDWEHLRPPVLGM 80
V + + DW+ + P V +
Sbjct: 63 AVERHPKVDWKVILPEVRAV 82
>gi|119475888|ref|ZP_01616240.1| hypothetical protein GP2143_04845 [marine gamma proteobacterium
HTCC2143]
gi|119450515|gb|EAW31749.1| hypothetical protein GP2143_04845 [marine gamma proteobacterium
HTCC2143]
Length = 203
Score = 64.4 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYG 171
+DS + RI VL N V P++A GG++ + + L G C GC TLK G
Sbjct: 114 ADSPLEDRINYVLYNEVNPSLASHGGEVSLLEVTEEKVAILQFGGGCQGCGMVEATLKDG 173
Query: 172 VANILNHFVPEVKDIRT 188
V L +PE+ +R
Sbjct: 174 VEKSLMEQIPELTAVRD 190
>gi|156097428|ref|XP_001614747.1| hypothetical protein [Plasmodium vivax SaI-1]
gi|148803621|gb|EDL45020.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 265
Score = 64.0 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ +++VL N +RP + D GD+ ++ +++ + G C C S S T+ +
Sbjct: 79 DLTPENVEKVL-NLIRPKLQIDNGDVELVDIKNNDLYIKLLGNCVTCSSNSVTVSQVIKK 137
Query: 175 ILNHFV 180
L ++
Sbjct: 138 TLKMYI 143
>gi|240168421|ref|ZP_04747080.1| NifU domain-containing protein [Mycobacterium kansasii ATCC 12478]
Length = 189
Score = 64.0 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 16/127 (12%)
Query: 61 ITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
ITVG + W L + + + + +++ S + + +
Sbjct: 58 ITVGATR-SWRELGDDIRTALTDALV---------DPAGWRVEQPTSSE-----AQLTTL 102
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+E+L + GG I V + M GAC GC +A+ TL+ + L
Sbjct: 103 AQELLAGPIGELAGSHGGSIELVSVVGLNVTVRMSGACRGCLAANSTLRDRLQRELRRRA 162
Query: 181 P-EVKDI 186
EV I
Sbjct: 163 GIEVTVI 169
>gi|221054692|ref|XP_002258485.1| NifU-like protein [Plasmodium knowlesi strain H]
gi|193808554|emb|CAQ39257.1| NifU-like protein, putative [Plasmodium knowlesi strain H]
Length = 269
Score = 64.0 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ +++VL N +RP + D GD+ ++ +++ + G C C S S T+ +
Sbjct: 83 DLTPENVEKVL-NLIRPKLQIDNGDVELVDIKNNDLYIKLLGNCVTCSSNSVTVSQVIKK 141
Query: 175 ILNHFV 180
L ++
Sbjct: 142 TLKMYI 147
>gi|154148924|ref|YP_001405665.1| nitrogen fixation protein NifU [Campylobacter hominis ATCC BAA-381]
gi|153804933|gb|ABS51940.1| nitrogen fixation protein NifU [Campylobacter hominis ATCC BAA-381]
Length = 330
Score = 64.0 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGY---RDGI--VFLSMRGACSGCPSASETLKYGVA 173
+ +++V+D +RP +A DGG++ DG +++ GACSGC S + Y +
Sbjct: 255 KAVEDVIDKEIRPMLAFDGGNLDIVDIKNADDGKTDIYIRYLGACSGCSSGATGTLYAIE 314
Query: 174 NILNH 178
N+L
Sbjct: 315 NVLQE 319
>gi|226946904|ref|YP_002801977.1| NifU C-terminal domain-containing protein AnfU [Azotobacter
vinelandii DJ]
gi|226721831|gb|ACO81002.1| NifU C-terminal domain-containing protein, AnfU [Azotobacter
vinelandii DJ]
Length = 96
Score = 64.0 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 99 DMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGAC 158
+ + D S ++ I E ++ R+RP + DGGD+ V L ++G C
Sbjct: 2 NTQPDLERSAAKPLTEEQRSSIITETIE-RLRPGLQADGGDMEIVSIDGYKVRLRLKGMC 60
Query: 159 SGCPSASETLKYGVANILN 177
+GC ++ ETL G+ L
Sbjct: 61 AGCTASGETL-GGIRRQLM 78
>gi|315930881|gb|EFV09868.1| nitrogen fixation protein nifU [Campylobacter jejuni subsp. jejuni
305]
Length = 323
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Query: 93 HNGGLGDMKLDDMGSGDFIESDSAVVQR---IKEVLDNRVRPAVARDGGDIVFKGYRDG- 148
+ KL + D + VV + ++ VLD +RP + DGGD+ +
Sbjct: 219 TRAEIDREKLKNTMKSDVAFDEMTVVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQKAE 278
Query: 149 ----IVFLSMRGACSGCPS-ASETLKYGVANILNHFV-PEVKDIRTV 189
V++ GACSGC S + TL Y + IL + P ++ + V
Sbjct: 279 GAAIDVYIRYLGACSGCSSGSGATL-YAIETILQEELSPNIR-VMPV 323
>gi|86153596|ref|ZP_01071799.1| NifU family protein [Campylobacter jejuni subsp. jejuni HB93-13]
gi|85842557|gb|EAQ59769.1| NifU family protein [Campylobacter jejuni subsp. jejuni HB93-13]
Length = 323
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Query: 93 HNGGLGDMKLDDMGSGDFIESDSAVVQR---IKEVLDNRVRPAVARDGGDIVFKGYRDG- 148
+ KL + D + VV + ++ VLD +RP + DGGD+ +
Sbjct: 219 TRAEIDREKLKNTMKSDVAFDEMTVVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQKAE 278
Query: 149 ----IVFLSMRGACSGCPS-ASETLKYGVANILNHFV-PEVKDIRTV 189
V++ GACSGC S + TL Y + IL + P ++ + V
Sbjct: 279 GAAIDVYIRYLGACSGCSSGSGATL-YAIETILQEELSPNIR-VMPV 323
>gi|86151274|ref|ZP_01069489.1| NifU family protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|315123826|ref|YP_004065830.1| NifU family protein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85841621|gb|EAQ58868.1| NifU family protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|315017548|gb|ADT65641.1| NifU family protein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 323
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Query: 93 HNGGLGDMKLDDMGSGDFIESDSAVVQR---IKEVLDNRVRPAVARDGGDIVFKGYRDG- 148
+ KL + D + VV + ++ VLD +RP + DGGD+ +
Sbjct: 219 TRAEIDREKLKNTMKSDVAFDEMTVVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQKAE 278
Query: 149 ----IVFLSMRGACSGCPS-ASETLKYGVANILNHFV-PEVKDIRTV 189
V++ GACSGC S + TL Y + IL + P ++ + V
Sbjct: 279 GAAIDVYIRYLGACSGCSSGSGATL-YAIETILQEELSPNIR-VMPV 323
>gi|169831222|ref|YP_001717204.1| NifU domain-containing protein [Candidatus Desulforudis audaxviator
MP104C]
gi|169638066|gb|ACA59572.1| nitrogen-fixing NifU domain protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 43
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSG 160
+ ++++EVL N+VRP + RDGGD+ +DG+V + ++GAC G
Sbjct: 1 MREKVEEVL-NKVRPYLQRDGGDVELVDVKDGVVHVRLKGACRG 43
>gi|26553528|ref|NP_757462.1| nitrogen fixation protein [Mycoplasma penetrans HF-2]
gi|26453534|dbj|BAC43866.1| nitrogen fixation protein [Mycoplasma penetrans HF-2]
Length = 83
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGVAN 174
++ IK+V+D+ +R + +DGGD+ F Y G V + + G C GC T K G+
Sbjct: 9 IIDEIKDVIDS-IRFYINQDGGDLEFVDYNPEKGEVTIKILGECIGCSLIDVTYKEGLET 67
Query: 175 ILNHFVPEVKDI 186
IL + V VK +
Sbjct: 68 ILKNEVEGVKSV 79
>gi|57237299|ref|YP_178312.1| NifU family protein [Campylobacter jejuni RM1221]
gi|88597232|ref|ZP_01100467.1| NifU family protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|121613377|ref|YP_999952.1| NifU family protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|157414537|ref|YP_001481793.1| NifU family protein [Campylobacter jejuni subsp. jejuni 81116]
gi|167004909|ref|ZP_02270667.1| nifU-like protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|205356531|ref|ZP_03223294.1| NifU protein [Campylobacter jejuni subsp. jejuni CG8421]
gi|218561903|ref|YP_002343682.1| NifU protein [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|57166103|gb|AAW34882.1| NifU family protein [Campylobacter jejuni RM1221]
gi|87250262|gb|EAQ73220.1| NifU family protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|88190293|gb|EAQ94267.1| NifU family protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|112359609|emb|CAL34394.1| NifU protein homolog [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|157385501|gb|ABV51816.1| nifU-like protein [Campylobacter jejuni subsp. jejuni 81116]
gi|205345536|gb|EDZ32176.1| NifU protein [Campylobacter jejuni subsp. jejuni CG8421]
gi|284925515|gb|ADC27867.1| NifU family protein [Campylobacter jejuni subsp. jejuni IA3902]
gi|307747179|gb|ADN90449.1| NifU family protein [Campylobacter jejuni subsp. jejuni M1]
gi|315928167|gb|EFV07485.1| nitrogen fixation protein nifU [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315932037|gb|EFV10990.1| Nitrogen fixation protein NifU [Campylobacter jejuni subsp. jejuni
327]
Length = 323
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Query: 93 HNGGLGDMKLDDMGSGDFIESDSAVVQR---IKEVLDNRVRPAVARDGGDIVFKGYRDG- 148
+ KL + D + VV + ++ VLD +RP + DGGD+ +
Sbjct: 219 TRAEIDREKLKNTMKSDVAFDEMTVVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQKAE 278
Query: 149 ----IVFLSMRGACSGCPS-ASETLKYGVANILNHFV-PEVKDIRTV 189
V++ GACSGC S + TL Y + IL + P ++ + V
Sbjct: 279 GAAIDVYIRYLGACSGCSSGSGATL-YAIETILQEELSPNIR-VMPV 323
>gi|76801126|ref|YP_326134.1| NifU domain-containing protein [Natronomonas pharaonis DSM 2160]
gi|76556991|emb|CAI48565.1| nifU protein C-terminal domain homolog [Natronomonas pharaonis DSM
2160]
Length = 121
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSA 164
S + + D + +RI L P + GG + +G V + + GACSGC +
Sbjct: 2 STETADGDEELRERISNFLRRNF-PQIQMHGGSAAIQDLDRENGEVTIMLGGACSGCGIS 60
Query: 165 SETLKYGVANILNHFVPEVKDI 186
T+ + + + +PE+ +
Sbjct: 61 PMTI-QAIKSRMTEEIPEIDTV 81
>gi|283955663|ref|ZP_06373156.1| nifU-like protein [Campylobacter jejuni subsp. jejuni 1336]
gi|283792888|gb|EFC31664.1| nifU-like protein [Campylobacter jejuni subsp. jejuni 1336]
Length = 323
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Query: 93 HNGGLGDMKLDDMGSGDFIESDSAVVQR---IKEVLDNRVRPAVARDGGDIVFKGYRDG- 148
+ KL + D + VV + ++ VLD +RP + DGGD+ +
Sbjct: 219 TRAEMDREKLKNTMKSDVAFDEMTVVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQKAE 278
Query: 149 ----IVFLSMRGACSGCPS-ASETLKYGVANILNHFV-PEVKDIRTV 189
V++ GACSGC S + TL Y + IL + P ++ + V
Sbjct: 279 GAAIDVYIRYLGACSGCSSGSGATL-YAIETILQEELSPNIR-VMPV 323
>gi|224372844|ref|YP_002607216.1| NifU family protein [Nautilia profundicola AmH]
gi|223588388|gb|ACM92124.1| NifU family protein [Nautilia profundicola AmH]
Length = 321
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAV--VQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGI 149
+ L + + E S + ++ I+E LD +++P +A DGG + DGI
Sbjct: 220 QEQMKKENLKNATETEDFEKMSLIKKIKAIEEFLDTKIKPMLAMDGGSLELLDIREEDGI 279
Query: 150 --VFLSMRGACSGCPSASETLKYGVANILNHF 179
V++ GAC+ C S TL + + +
Sbjct: 280 TKVYIRYMGACATCASGGVTLL-AIEDEMKKH 310
>gi|57168365|ref|ZP_00367499.1| nifU protein homolog Cj0239c [Campylobacter coli RM2228]
gi|305432781|ref|ZP_07401940.1| NifU family protein [Campylobacter coli JV20]
gi|57020173|gb|EAL56847.1| nifU protein homolog Cj0239c [Campylobacter coli RM2228]
gi|304444178|gb|EFM36832.1| NifU family protein [Campylobacter coli JV20]
Length = 323
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Query: 93 HNGGLGDMKLDDMGSGDFIESDSAVVQR---IKEVLDNRVRPAVARDGGDIVFKGYRDG- 148
+ KL + D + VV + ++ VLD +RP + DGGD+ +
Sbjct: 219 TRAEIDREKLKNTMKSDVAFDEMTVVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQKAE 278
Query: 149 ----IVFLSMRGACSGCPS-ASETLKYGVANILNHFV-PEVKDIRTV 189
V++ GACSGC S + TL Y + IL + P ++ + V
Sbjct: 279 GAAIDVYIRYLGACSGCSSGSGATL-YAIETILQEELSPNIR-VMPV 323
>gi|153951672|ref|YP_001397468.1| NifU family protein [Campylobacter jejuni subsp. doylei 269.97]
gi|152939118|gb|ABS43859.1| NifU family protein [Campylobacter jejuni subsp. doylei 269.97]
Length = 323
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Query: 93 HNGGLGDMKLDDMGSGDFIESDSAVVQR---IKEVLDNRVRPAVARDGGDIVFKGYRDG- 148
+ KL + D + VV + ++ VLD +RP + DGGD+ +
Sbjct: 219 TRAEIDREKLKNTMKSDVAFDEMTVVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQKAE 278
Query: 149 ----IVFLSMRGACSGCPS-ASETLKYGVANILNHFV 180
V++ GACSGC S + TL Y + IL +
Sbjct: 279 GAAIDVYIRYLGACSGCSSGSGATL-YAIETILQEEL 314
>gi|57505685|ref|ZP_00371611.1| nifU protein homolog Cj0239c [Campylobacter upsaliensis RM3195]
gi|57015958|gb|EAL52746.1| nifU protein homolog Cj0239c [Campylobacter upsaliensis RM3195]
Length = 323
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 10/106 (9%)
Query: 93 HNGGLGDMKLDDMGSGDFIESDSAVVQR---IKEVLDNRVRPAVARDGGDIVFKGY---R 146
+ KL + D + +V + ++ VLD +RP + DGGD+
Sbjct: 219 TRAEMDREKLKNAMKSDVAFDEMTMVGQLKAVEAVLDAEIRPMLQGDGGDMEVIDLQKAE 278
Query: 147 DG--IVFLSMRGACSGCPSASETLKYGVANILNHFV-PEVKDIRTV 189
G +++ GAC GC S + Y + +IL + P ++ + V
Sbjct: 279 GGAIDIYIRYLGACGGCSSGTGATLYAIESILQEELSPNIR-VMPV 323
>gi|315057669|gb|ADT71998.1| Iron-sulfur cluster assembly scaffold protein NifU [Campylobacter
jejuni subsp. jejuni S3]
Length = 323
Score = 63.7 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 93 HNGGLGDMKLDDMGSGDFIESDSAVVQR---IKEVLDNRVRPAVARDGGDIVFKGYR--D 147
+ KL + D + VV + ++ VLD +RP + DGGD+ + +
Sbjct: 219 TRAEIDREKLKNTMKSDVAFDEMTVVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQKTE 278
Query: 148 G---IVFLSMRGACSGCPS-ASETLKYGVANILNHFV-PEVKDIRTV 189
G V++ GACSGC S + TL Y + IL + P ++ + V
Sbjct: 279 GAAIDVYIRYLGACSGCSSGSGATL-YAIETILQEELSPNIR-VMPV 323
>gi|315928505|gb|EFV07809.1| nitrogen fixation protein nifU [Campylobacter jejuni subsp. jejuni
305]
Length = 286
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Query: 93 HNGGLGDMKLDDMGSGDFIESDSAVVQR---IKEVLDNRVRPAVARDGGDIVFKGYRDG- 148
+ KL + D + VV + ++ VLD +RP + DGGD+ +
Sbjct: 182 TRAEIDREKLKNTMKSDVAFDEMTVVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQKAE 241
Query: 149 ----IVFLSMRGACSGCPS-ASETLKYGVANILNHFV 180
V++ GACSGC S + TL Y + IL +
Sbjct: 242 GAAIDVYIRYLGACSGCSSGSGATL-YAIETILQEEL 277
>gi|317053470|ref|YP_004119237.1| Fe-S cluster assembly protein NifU [Pantoea sp. At-9b]
gi|255761147|gb|ACU32746.1| Fe-S cluster assembly protein [Pantoea sp. At-9b]
gi|316953209|gb|ADU72681.1| Fe-S cluster assembly protein NifU [Pantoea sp. At-9b]
Length = 274
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 35/98 (35%), Gaps = 2/98 (2%)
Query: 92 IHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVF 151
I + + + Q + E + +RP + DGGD+ + V
Sbjct: 179 IELALAAILASAPEMTAPVSPAKDPHWQDVMETI-TELRPHIQADGGDMSLVNVANHTVT 237
Query: 152 LSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+S+ G+CSGC TL + L ++ V
Sbjct: 238 VSLTGSCSGCMMTDMTL-AWLQQKLMERTGCYMEVVAV 274
>gi|257460305|ref|ZP_05625408.1| nitrogen fixation protein NifU [Campylobacter gracilis RM3268]
gi|257442370|gb|EEV17510.1| nitrogen fixation protein NifU [Campylobacter gracilis RM3268]
Length = 333
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 93 HNGGLGDMKLDDMGSGDFIESDSAV--VQRIKEVLDNRVRPAVARDGGDIVFKGY---RD 147
G+ E + + + ++ VLD +RP + DGG++ D
Sbjct: 230 AQAEASAATSAKAGAEMSFEQLNLIGKFKAVEGVLDEDIRPMLQMDGGNLDVIDIRPADD 289
Query: 148 GI--VFLSMRGACSGCPSASETLKYGVANILNHFV-PEVK 184
G +++ GACSGC S + Y + N+L + P ++
Sbjct: 290 GKTDIYIRYLGACSGCASGASGTLYAIENVLQENLSPNIR 329
>gi|78778201|ref|YP_394516.1| nitrogen-fixing NifU-like-like [Sulfurimonas denitrificans DSM
1251]
gi|78498741|gb|ABB45281.1| Nitrogen-fixing NifU-like protein-like protein [Sulfurimonas
denitrificans DSM 1251]
Length = 324
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Query: 94 NGGLGDMKLDDMGSGDFIE-SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI--- 149
+ D GSG F + ++ I V+D VR + DGG++ +
Sbjct: 224 DEEKMKAAADAGGSGSFEAMTLVQKIKAIDAVVDENVRQFLIMDGGNMEVIDVKTSDEYI 283
Query: 150 -VFLSMRGACSGCPSASETLKYGVANILNHFV 180
V++ GAC+GC S++ Y + L +
Sbjct: 284 DVYIRYLGACNGCASSATGTLYAIEATLKEKL 315
>gi|229916484|ref|YP_002885130.1| Scaffold protein Nfu/NifU [Exiguobacterium sp. AT1b]
gi|229467913|gb|ACQ69685.1| Scaffold protein Nfu/NifU [Exiguobacterium sp. AT1b]
Length = 82
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
++ + TPNP +K + V + A EA PL +++ I G+ SV+ DF+
Sbjct: 1 MLRIDPTPNPNAMKVTLPENVFGAKSQSVK-AGEATDQPLLAKLVEIEGVESVFAYGDFV 59
Query: 62 TVGKDQ-YDWEHLRPPVLGMIM 82
TV K+ WE + P V
Sbjct: 60 TVSKENGVSWEAILPHVETAYR 81
>gi|148926387|ref|ZP_01810071.1| nifU protein like protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145844779|gb|EDK21884.1| nifU protein like protein [Campylobacter jejuni subsp. jejuni
CG8486]
Length = 317
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Query: 93 HNGGLGDMKLDDMGSGDFIESDSAVVQR---IKEVLDNRVRPAVARDGGDIVFKGYRDG- 148
+ KL + D + VV + ++ VLD +RP + DGGD+ +
Sbjct: 213 TRAEIDREKLKNTMKSDVAFDEMTVVGQLKAVESVLDAEIRPMLHNDGGDLEVIDIQKAE 272
Query: 149 ----IVFLSMRGACSGCPS-ASETLKYGVANILNHFV 180
V++ GACSGC S + TL Y + IL +
Sbjct: 273 GAAIDVYIRYLGACSGCSSGSGATL-YAIETILQEEL 308
>gi|283955341|ref|ZP_06372840.1| nifU-like protein [Campylobacter jejuni subsp. jejuni 414]
gi|283793101|gb|EFC31871.1| nifU-like protein [Campylobacter jejuni subsp. jejuni 414]
Length = 323
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPS-ASETLKYG 171
++ ++ VLD +RP + DGGD+ + V++ GACSGC S + TL Y
Sbjct: 247 LKAVESVLDAEIRPMLHNDGGDLEVIDIQKAESAAIDVYIRYLGACSGCSSGSGATL-YA 305
Query: 172 VANILNHFV-PEVKDIRTV 189
+ IL + P ++ + V
Sbjct: 306 IETILQEELSPNIR-VMPV 323
>gi|86149607|ref|ZP_01067837.1| NifU family protein [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85839875|gb|EAQ57134.1| NifU family protein [Campylobacter jejuni subsp. jejuni CF93-6]
Length = 323
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPS-ASETLKYG 171
++ ++ VLD +RP + DGGD+ + V++ GACSGC S + TL Y
Sbjct: 247 LKAVESVLDAEIRPMLHNDGGDLEVIDIQKAEGAAIDVYIRYLGACSGCSSGSGATL-YA 305
Query: 172 VANILNHFV-PEVKDIRTV 189
+ IL + P ++ + V
Sbjct: 306 IETILQEELSPNIR-VMPV 323
>gi|222478586|ref|YP_002564823.1| nitrogen-fixing NifU domain protein [Halorubrum lacusprofundi ATCC
49239]
gi|222451488|gb|ACM55753.1| nitrogen-fixing NifU domain protein [Halorubrum lacusprofundi ATCC
49239]
Length = 125
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGD--IVFKGYRDGIVFLSMRGACSGCPSA 164
S D ++D+ + +RI L P + GG I G V + + GACSGC +
Sbjct: 2 STDTTDADNDLRERITNFLRRNF-PQIQMHGGSAAISHLDRESGEVTVQLGGACSGCGIS 60
Query: 165 SETLKYGVANILNHFVPEVKDI 186
T+ + + + +PE++ +
Sbjct: 61 PMTI-QAIKSRMVKEIPEIETV 81
>gi|325280703|ref|YP_004253245.1| nitrogen-fixing NifU domain-containing protein [Odoribacter
splanchnicus DSM 20712]
gi|324312512|gb|ADY33065.1| nitrogen-fixing NifU domain-containing protein [Odoribacter
splanchnicus DSM 20712]
Length = 103
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYG 171
ES S+ +R++E++ RVRP + GGD+ + R V + GAC CP+A T++
Sbjct: 6 ESSSSFEERVREIVLYRVRPHLLEHGGDLSVREIRGRDVGIVFSGACGACPAAQITVEQV 65
Query: 172 VANILNHFV 180
V L +
Sbjct: 66 VEKGLRREL 74
>gi|182677480|ref|YP_001831626.1| NifU domain-containing protein [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633363|gb|ACB94137.1| nitrogen-fixing NifU domain protein [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 106
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 92 IHNGGLGDMKLDDMGSGDFIESDSAVVQR--IKEVLDNRVRPAVARDGGDIVFKGYRDGI 149
++ K + G+ + + A +R I E +++ +RP + RD GD +
Sbjct: 2 LNPAEKIVEKAPEEGAAEVVSDAVAAARRQLIAETIES-IRPNLQRDKGDCELIDVQGDK 60
Query: 150 VFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
VF+ M GAC GC +S TL GV L + + V
Sbjct: 61 VFVKMTGACVGCQLSSMTL-NGVQAKLVEATGRMIRVIPV 99
>gi|163783768|ref|ZP_02178753.1| hypothetical protein HG1285_09916 [Hydrogenivirga sp. 128-5-R1-1]
gi|159880957|gb|EDP74476.1| hypothetical protein HG1285_09916 [Hydrogenivirga sp. 128-5-R1-1]
Length = 83
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+++VL+ ++RPA+ G + DG+V+L G CS CP +LK V L
Sbjct: 7 DEVEKVLE-KIRPALKDHQGSLKIVNIEDGVVYLQFVGGCSDCPVVDVSLKNVVDIALKG 65
Query: 179 FVPEVKDIR 187
+ V+ +
Sbjct: 66 NLNWVRKVE 74
>gi|255025885|ref|ZP_05297871.1| NifU family protein [Listeria monocytogenes FSL J2-003]
Length = 41
Score = 63.3 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 150 VFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
V + + GAC CPS+ TLK G+ L + K++ V
Sbjct: 1 VKIKLLGACETCPSSDMTLKMGIELTLAEKIIGFKEVVQV 40
>gi|257453153|ref|ZP_05618452.1| hypothetical protein F3_08841 [Fusobacterium sp. 3_1_5R]
gi|317059688|ref|ZP_07924173.1| predicted protein [Fusobacterium sp. 3_1_5R]
gi|313685364|gb|EFS22199.1| predicted protein [Fusobacterium sp. 3_1_5R]
Length = 102
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI--VFLSMRGACSGCPSASETLKYGVANI 175
++ I E++ ++P++ GG + Y + + L + G C CP + +T++ +
Sbjct: 1 MEEILELIGKEIQPSLQEHGGSLEIVLYEEEKQELQLRLMGQCCSCPHSIDTVENFIKVK 60
Query: 176 LNHFVPEVKDI 186
L P++K I
Sbjct: 61 LKEKFPKLKKI 71
>gi|297171090|gb|ADI22102.1| thioredoxin-like proteins and domains [uncultured Planctomycetales
bacterium HF0200_11L05]
Length = 195
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKY 170
+ D+++ +R+ +L + + P++A GG++ L G C GC TLK
Sbjct: 105 DEDASLEERVNYLLYSEINPSLAAHGGEVSLVEILNKETAVLQFGGGCQGCGMVDVTLKD 164
Query: 171 GVANILNHFVPEVKDIRTV 189
G+ L +PE+K I V
Sbjct: 165 GIEKTLIEEIPELKGIADV 183
>gi|70726477|ref|YP_253391.1| hypothetical protein SH1476 [Staphylococcus haemolyticus
JCSC1435]
gi|68447201|dbj|BAE04785.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 83
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 1 MFI-QTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
M I E+TPN T+K + + F++A+E + +++F I G+ S+++ D
Sbjct: 1 MQIVSIEETPNHKTMKINLSEKREDNKSNTFTSAQEGQPD-FINKLFDIDGVKSIFYVMD 59
Query: 60 FITVGK-DQYDWEHLRPPVLGM 80
FI+V K D DW ++ P +
Sbjct: 60 FISVDKEDNADWNNILPQIQST 81
>gi|229496013|ref|ZP_04389737.1| NifU-related protein [Porphyromonas endodontalis ATCC 35406]
gi|229317105|gb|EEN83014.1| NifU-related protein [Porphyromonas endodontalis ATCC 35406]
Length = 104
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILN 177
++EVL+ RV P +A GG + +G + ++ +GAC+ CPS +ET+ V L
Sbjct: 6 DAVQEVLETRVAPQLALHGGGVKLCSISPEGDIRVAFKGACATCPSMTETMDALVMGQLR 65
Query: 178 HFVPE 182
P+
Sbjct: 66 AAFPD 70
>gi|313124942|ref|YP_004035206.1| thioredoxin-like protein [Halogeometricum borinquense DSM 11551]
gi|312291307|gb|ADQ65767.1| thioredoxin-like protein [Halogeometricum borinquense DSM 11551]
Length = 119
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGD--IVFKGYRDGIVFLSMRGACSGCPSA 164
S D +D + +R+ L P + GG I +G V + + GACSGC +
Sbjct: 2 STDASNTDDDLKERVTNFLRRNF-PQIQMHGGSAAIQHLDREEGEVTIMLGGACSGCGIS 60
Query: 165 SETLKYGVANILNHFVPEVKDI 186
T+ + + + +PE++ +
Sbjct: 61 PMTI-QAIKSRMVKEIPEIEKV 81
>gi|148645200|gb|ABR01124.1| NifU [uncultured Geobacter sp.]
Length = 44
Score = 62.5 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 138 GDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
GD+ DG+V + + GAC CP + LK G+ L V
Sbjct: 1 GDVELVEVTADGVVKVKLVGACGHCPMSXXXLKMGIEKTLXEKV 44
>gi|207109796|ref|ZP_03243958.1| nifU-like protein [Helicobacter pylori HPKX_438_CA4C1]
Length = 97
Score = 62.5 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDGI- 149
+ +G+ + +VQ+IK +V+D +RP + DGGD+ ++
Sbjct: 9 EAEKLKATANKSQNGELAFREMTMVQKIKAVDKVIDENIRPMLMMDGGDLEILDIKESDD 68
Query: 150 ---VFLSMRGACSGCPSASETLKYGVANI 175
V++ GAC GC SA+ + + N
Sbjct: 69 YIDVYIRYMGACDGCMSATTGTLFAIENT 97
>gi|195952780|ref|YP_002121070.1| nitrogen-fixing NifU domain protein [Hydrogenobaculum sp. Y04AAS1]
gi|195932392|gb|ACG57092.1| nitrogen-fixing NifU domain protein [Hydrogenobaculum sp. Y04AAS1]
Length = 83
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+Q ++ +L +RPA+ G++ +D +V+L G CS CP ++K +
Sbjct: 2 EDKLQEVERILQ-MIRPALDTHHGNLKLVDVKDNVVYLQFEGGCSDCPVVDMSVKNVIDT 60
Query: 175 ILNHFVPEVKDIR 187
+ + VK +
Sbjct: 61 SIKGNLRWVKKVE 73
>gi|269302647|gb|ACZ32747.1| NifU family protein [Chlamydophila pneumoniae LPCoLN]
Length = 266
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV- 180
+ + ++ P +A DGG++ + + IV ++ G CSGCPS+ + + +L ++
Sbjct: 190 RATIAEKIGPYIAMDGGEVTVESLENFIVTIAYSGNCSGCPSSLGSTLNSIGQLLRAYIY 249
Query: 181 PEVK 184
PE++
Sbjct: 250 PELQ 253
>gi|33242221|ref|NP_877162.1| NifU-like protein [Chlamydophila pneumoniae TW-183]
gi|33236732|gb|AAP98819.1| NifU-like protein [Chlamydophila pneumoniae TW-183]
Length = 266
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV- 180
+ + ++ P +A DGG++ + + IV ++ G CSGCPS+ + + +L ++
Sbjct: 190 RATIAEKIGPYIAMDGGEVTVESLENFIVTIAYSGNCSGCPSSLGSTLNSIGQLLRAYIY 249
Query: 181 PEVK 184
PE++
Sbjct: 250 PELQ 253
>gi|27468042|ref|NP_764679.1| hypothetical protein SE1124 [Staphylococcus epidermidis ATCC
12228]
gi|57866930|ref|YP_188584.1| hypothetical protein SERP1007 [Staphylococcus epidermidis RP62A]
gi|242242718|ref|ZP_04797163.1| conserved hypothetical protein [Staphylococcus epidermidis
W23144]
gi|251810865|ref|ZP_04825338.1| conserved hypothetical protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876129|ref|ZP_06284996.1| scaffold protein Nfu/NifU N-terminal domain protein
[Staphylococcus epidermidis SK135]
gi|293366594|ref|ZP_06613271.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|27315587|gb|AAO04721.1|AE016747_218 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57637588|gb|AAW54376.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
gi|242233854|gb|EES36166.1| conserved hypothetical protein [Staphylococcus epidermidis
W23144]
gi|251805545|gb|EES58202.1| conserved hypothetical protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295154|gb|EFA87681.1| scaffold protein Nfu/NifU N-terminal domain protein
[Staphylococcus epidermidis SK135]
gi|291319363|gb|EFE59732.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|319400790|gb|EFV89009.1| scaffold Nfu/NifU family protein [Staphylococcus epidermidis
FRI909]
gi|329731570|gb|EGG67932.1| scaffold protein Nfu/NifU N-terminal domain protein
[Staphylococcus epidermidis VCU144]
gi|329735279|gb|EGG71571.1| scaffold protein Nfu/NifU N-terminal domain protein
[Staphylococcus epidermidis VCU045]
gi|329737394|gb|EGG73648.1| scaffold protein Nfu/NifU N-terminal domain protein
[Staphylococcus epidermidis VCU028]
Length = 86
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I +TPN T+K + + ++ A+E + +R+F I G+ S+++ DFI+
Sbjct: 4 IAISETPNHNTMKVSLSEPRQDNSSTTYTAAQEGQ-PEFINRLFEIEGVKSIFYVLDFIS 62
Query: 63 VGK-DQYDWEHLRPPV 77
+ K D +W L P +
Sbjct: 63 IDKEDNANWNELLPQI 78
>gi|16752178|ref|NP_445545.1| nifU protein, putative [Chlamydophila pneumoniae AR39]
gi|7189922|gb|AAF38786.1| nifU protein, putative [Chlamydophila pneumoniae AR39]
Length = 266
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV- 180
+ + ++ P +A DGG++ + + IV ++ G CSGCPS+ + + +L ++
Sbjct: 190 RATIAEKIGPYIAMDGGEVTVESLENFIVTIAYSGNCSGCPSSLGSTLNSIGQLLRAYIY 249
Query: 181 PEVK 184
PE++
Sbjct: 250 PELQ 253
>gi|15618770|ref|NP_225056.1| NifU-related protein [Chlamydophila pneumoniae CWL029]
gi|15836394|ref|NP_300918.1| NifU-related protein [Chlamydophila pneumoniae J138]
gi|4377178|gb|AAD18999.1| NifU-related protein [Chlamydophila pneumoniae CWL029]
gi|8979235|dbj|BAA99069.1| NifU-related protein [Chlamydophila pneumoniae J138]
Length = 266
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV- 180
+ + ++ P +A DGG++ + + IV ++ G CSGCPS+ + + +L ++
Sbjct: 190 RATIAEKIGPYIAMDGGEVTVESLENFIVTIAYSGNCSGCPSSLGSTLNSIGQLLRAYIY 249
Query: 181 PEVK 184
PE++
Sbjct: 250 PELQ 253
>gi|55379654|ref|YP_137504.1| hypothetical protein rrnAC3083 [Haloarcula marismortui ATCC 43049]
gi|55232379|gb|AAV47798.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 140
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLK 169
E + + +RI L P + GG + +G V + + GACSGC + T+
Sbjct: 22 EDANDLRERITNFLRRNF-PQIQMHGGSAAIEEIDREEGSVTIRLGGACSGCGISPMTI- 79
Query: 170 YGVANILNHFVPEVKDI 186
+ + +PE+ ++
Sbjct: 80 QAIKTRMTKEIPEINEV 96
>gi|319955766|ref|YP_004167029.1| bfd domain protein (2fe-2S)-binding domain protein [Nitratifractor
salsuginis DSM 16511]
gi|319418170|gb|ADV45280.1| BFD domain protein (2Fe-2S)-binding domain protein [Nitratifractor
salsuginis DSM 16511]
Length = 320
Score = 62.1 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG----IVFLSMRGACSGCPSASETLKY 170
I V+D +R + DGGD+ ++ +++ GACSGC SAS +
Sbjct: 242 EEKKAAINAVIDEHIRAMLVMDGGDMEILDVKENGEHTDLYIRYLGACSGCASASTGTLF 301
Query: 171 GVANILNHFV-PEVK 184
+ IL + P ++
Sbjct: 302 AIEGILKQKLDPNIR 316
>gi|332558975|ref|ZP_08413297.1| nitrogen fixation protein [Rhodobacter sphaeroides WS8N]
gi|332276687|gb|EGJ22002.1| nitrogen fixation protein [Rhodobacter sphaeroides WS8N]
Length = 246
Score = 62.1 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ + I EV+++ VRP + DGGD+ V + + GACSGC A+ TL G+
Sbjct: 162 AEEARLIAEVIES-VRPRLRADGGDVTLVAVEGSKVRVHLTGACSGCQLAALTL-GGLQK 219
Query: 175 IL 176
L
Sbjct: 220 RL 221
>gi|221639965|ref|YP_002526227.1| nitrogen fixation protein nifU [Rhodobacter sphaeroides KD131]
gi|221160746|gb|ACM01726.1| Nitrogen fixation protein nifU [Rhodobacter sphaeroides KD131]
Length = 246
Score = 62.1 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ + I EV+++ VRP + DGGD+ V + + GACSGC A+ TL G+
Sbjct: 162 AEEARLIAEVIES-VRPRLRADGGDVTLVAVEGSKVRVHLTGACSGCQLAALTL-GGLQK 219
Query: 175 IL 176
L
Sbjct: 220 RL 221
>gi|77464100|ref|YP_353604.1| nitrogen fixation protein [Rhodobacter sphaeroides 2.4.1]
gi|266628|sp|Q01180|NIFU_RHOSH RecName: Full=Nitrogen fixation protein nifU
gi|151967|gb|AAA26136.1| nifU [Rhodobacter sphaeroides]
gi|77388518|gb|ABA79703.1| Nitrogen fixation protein [Rhodobacter sphaeroides 2.4.1]
Length = 246
Score = 62.1 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ + I EV+++ VRP + DGGD+ V + + GACSGC A+ TL G+
Sbjct: 162 AEEARLIAEVIES-VRPRLRADGGDVTLVAVEGSKVRVHLTGACSGCQLAALTL-GGLQK 219
Query: 175 IL 176
L
Sbjct: 220 RL 221
>gi|126462944|ref|YP_001044058.1| NifU domain-containing protein [Rhodobacter sphaeroides ATCC 17029]
gi|126104608|gb|ABN77286.1| nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides ATCC
17029]
Length = 246
Score = 62.1 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+ + I EV+++ VRP + DGGD+ V + + GACSGC A+ TL G+
Sbjct: 162 AEEARLIAEVIES-VRPRLRADGGDVTLVAVEGSKVRVHLTGACSGCQLAALTL-GGLQK 219
Query: 175 IL 176
L
Sbjct: 220 RL 221
>gi|239636889|ref|ZP_04677888.1| conserved virulence factor C [Staphylococcus warneri L37603]
gi|239597563|gb|EEQ80061.1| conserved virulence factor C [Staphylococcus warneri L37603]
Length = 84
Score = 62.1 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 7 DTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK- 65
+TPN T+K + + +++A+E + + +F I G+ S+++ DFI+V K
Sbjct: 8 ETPNHNTMKITLNETREDMKSNTYTSAEEGQ-PEFINALFDIEGVKSIFYVMDFISVDKE 66
Query: 66 DQYDWEHLRPPV 77
D+ DW+ L P +
Sbjct: 67 DEADWQTLIPQI 78
>gi|284929173|ref|YP_003421695.1| Fe-S cluster assembly protein NifU [cyanobacterium UCYN-A]
gi|213578831|gb|ACJ53725.1| Fe-S cluster assembly protein NifU [cyanobacterium UCYN-A]
Length = 294
Score = 61.7 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Query: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVAR 135
+ +I++ G + + + ++ + I++VL+ V+PA+A+
Sbjct: 184 DIDDIIVDVAEEGFTLTEDLSSEANIPELEVKTL---TNLQKITLIQQVLEEEVKPALAK 240
Query: 136 DGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
DGGD+ ++ + ++GACS C S++ TLK + L + + + V
Sbjct: 241 DGGDVELFDIEGNLIKVVLKGACSSCSSSTFTLKTAIEARLRERISKDLTVIAV 294
>gi|223040071|ref|ZP_03610352.1| NifU family protein [Campylobacter rectus RM3267]
gi|222878657|gb|EEF13757.1| NifU family protein [Campylobacter rectus RM3267]
Length = 330
Score = 61.7 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETLKYGV 172
++ I+ V+D ++RP + DGG++ + V++ GACSGC S + Y +
Sbjct: 254 LKAIESVIDEQIRPMLMMDGGNMEILDLQKDAEGKFDVYIRYMGACSGCASGATGTLYAI 313
Query: 173 ANILNH 178
N+L
Sbjct: 314 ENVLQE 319
>gi|256844964|ref|ZP_05550422.1| predicted protein [Fusobacterium sp. 3_1_36A2]
gi|256718523|gb|EEU32078.1| predicted protein [Fusobacterium sp. 3_1_36A2]
Length = 101
Score = 61.7 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFK--GYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ +I++ LD +RP + GG+I + L ++G C CP + ET + +
Sbjct: 1 MDKIEKFLDREIRPYLKSHGGNIEIINYSIERQELNLRLKGQCCVCPHSMETNENFIKKS 60
Query: 176 LNHFVPEVKDI 186
+ P++K+I
Sbjct: 61 ILEKFPKIKNI 71
>gi|34763076|ref|ZP_00144048.1| NifU-like protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27887244|gb|EAA24343.1| NifU-like protein [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 105
Score = 61.7 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFK--GYRDGIVFLSMRGACSGCPSASETLKYGVA 173
+ +I++ LD +RP + GGDI + L ++G C CP + ET + +
Sbjct: 3 ENMDKIEKFLDKEIRPYLKSHGGDIEIINYSIEKKELNLRLKGQCCVCPHSIETNENFIK 62
Query: 174 NILNHFVPEVKDI 186
+ E+K+I
Sbjct: 63 KSIVEKFSEIKNI 75
>gi|237741635|ref|ZP_04572116.1| predicted protein [Fusobacterium sp. 4_1_13]
gi|294785755|ref|ZP_06751043.1| nitrogen fixation protein NifU [Fusobacterium sp. 3_1_27]
gi|229429283|gb|EEO39495.1| predicted protein [Fusobacterium sp. 4_1_13]
gi|294487469|gb|EFG34831.1| nitrogen fixation protein NifU [Fusobacterium sp. 3_1_27]
Length = 105
Score = 61.3 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFK--GYRDGIVFLSMRGACSGCPSASETLKYGVA 173
+ +I++ LD +RP + GGDI + L ++G C CP + ET + +
Sbjct: 3 ENMDKIEKFLDKEIRPYLKSHGGDIEIINYSIEKQELNLRLKGQCCVCPHSIETNENFIK 62
Query: 174 NILNHFVPEVKDI 186
+ E+K+I
Sbjct: 63 KSIVEKFSEIKNI 75
>gi|261884718|ref|ZP_06008757.1| nitrogen fixation protein NifU [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 162
Score = 61.3 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYR----DGIV--FLSMRGACSGCPSASETLKYG 171
++ ++ V+D +RP + DGG++ + DG + ++ GACSGC S + Y
Sbjct: 85 LKAVEAVIDENIRPMLVMDGGNMEILDIKKEDADGKIDIYIRYLGACSGCASGATGTLYA 144
Query: 172 VANILNHFV-PEVKDIRTV 189
+ NIL + P ++ + V
Sbjct: 145 IENILQENLSPNIR-VLPV 162
>gi|297624836|ref|YP_003706270.1| nitrogen-fixing NifU domain-containing protein [Truepera
radiovictrix DSM 17093]
gi|297166016|gb|ADI15727.1| nitrogen-fixing NifU domain protein [Truepera radiovictrix DSM
17093]
Length = 198
Score = 61.3 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
D V QR++EVLD + P VA GG + ++ + G C GC +A TL+ G+
Sbjct: 99 DDPVAQRVQEVLDRIINPGVASHGGHVSLAKVEGDAAYVLLGGGCQGCGAADITLRQGIE 158
Query: 174 NILNHFVPEVKDI 186
+ VPE+K +
Sbjct: 159 EAICSAVPEIKRV 171
>gi|257386971|ref|YP_003176744.1| nitrogen-fixing NifU domain protein [Halomicrobium mukohataei DSM
12286]
gi|257169278|gb|ACV47037.1| nitrogen-fixing NifU domain protein [Halomicrobium mukohataei DSM
12286]
Length = 120
Score = 61.3 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGD--IVFKGYRDGIVFLSMRGACSGCPSASETLK 169
ES + +RI L P + GG I +G V + + GACSGC + T+
Sbjct: 6 ESGDDLEERITNFLRRNF-PQIQMHGGSAAIQNIDREEGSVTIQLGGACSGCGISPMTI- 63
Query: 170 YGVANILNHFVPEVKDIRT 188
+ + +PE+ +
Sbjct: 64 QAIKTRMTKEIPEIDTVHA 82
>gi|217979721|ref|YP_002363868.1| Fe-S cluster assembly protein NifU [Methylocella silvestris BL2]
gi|217505097|gb|ACK52506.1| Fe-S cluster assembly protein NifU [Methylocella silvestris BL2]
Length = 344
Score = 61.3 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Query: 89 DPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG 148
P+ +G+ ++ ++ I+E ++ +RP + +DGGD
Sbjct: 234 QPVSRPRVQISPLAPSAPAGEPAMTNLRKIKLIEETIEE-LRPFLRKDGGDCELIDVDGS 292
Query: 149 IVFLSMRGACSGCPSASETLKYGVANILNHFV 180
V + M GAC C AS T+ G+ L +
Sbjct: 293 NVLVKMSGACVLCKLASATI-SGIQEKLVEKL 323
>gi|90425924|ref|YP_534294.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris BisB18]
gi|90107938|gb|ABD89975.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris BisB18]
Length = 338
Score = 61.3 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 5/91 (5%)
Query: 90 PIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI 149
P + + ++++ E L RP + RDGGD
Sbjct: 243 PAPTSAAPRPVLPPSENRDRGTPEQFELIKQAVEAL----RPHLQRDGGDCELVDVDGNT 298
Query: 150 VFLSMRGACSGCPSASETLKYGVANILNHFV 180
++L + G C C AS TL GV L +
Sbjct: 299 IYLRLSGNCVDCQLASVTL-SGVQAQLAEKL 328
>gi|296444642|ref|ZP_06886606.1| Fe-S cluster assembly protein NifU [Methylosinus trichosporium
OB3b]
gi|296257910|gb|EFH04973.1| Fe-S cluster assembly protein NifU [Methylosinus trichosporium
OB3b]
Length = 340
Score = 61.0 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
++ I+E +++ +R + +DGGD V +S+ GAC GC AS T+ G+ L
Sbjct: 264 IRLIEETIED-LRVYLRKDGGDCELIDVDGSNVLVSLTGACVGCQMASVTV-SGIQERL 320
>gi|330684995|gb|EGG96670.1| PBS lyase HEAT-like repeat protein [Staphylococcus epidermidis
VCU121]
Length = 371
Score = 61.0 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + ++ + + + + + G+ S+++ DF+
Sbjct: 4 LRVEPTPSPNTMKIVLTEKRQDNQSNTYTTIND-QQPQFINDLLELDGVKSIFYVMDFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD 103
+ K + DWE + P + + + + + G++K +
Sbjct: 63 IDKQPKADWEEVLPLITSTLNKEDQTQQESQPDEHFGEVKAE 104
>gi|328906036|gb|EGG25811.1| NifU-like protein [Propionibacterium sp. P08]
Length = 156
Score = 61.0 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 41/127 (32%), Gaps = 15/127 (11%)
Query: 67 QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLD 126
+ W + + D + + + + E++
Sbjct: 41 EGTWGRIGAGFRTALTTALERTDEWVGG-----------PDSQPLNEVETLRRCTDELIA 89
Query: 127 NRVRPAVARDGGDIVFKGY----RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPE 182
V A GG I ++ V ++M+GAC GCP+A TL + L+ + E
Sbjct: 90 GPVGAVAAMHGGSIELVDVSVDGQERRVDVAMKGACRGCPAAVMTLHQRLERQLSLRLHE 149
Query: 183 VKDIRTV 189
+ V
Sbjct: 150 QVTVHEV 156
>gi|312114730|ref|YP_004012326.1| nitrogen-fixing NifU domain protein [Rhodomicrobium vannielii ATCC
17100]
gi|311219859|gb|ADP71227.1| nitrogen-fixing NifU domain protein [Rhodomicrobium vannielii ATCC
17100]
Length = 98
Score = 61.0 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
+E+ RI +RP + RDGGD V + M GAC GC AS T+
Sbjct: 16 PVETAEETKLRIIRETIEELRPHLKRDGGDCELLEVEGNFVKVRMTGACVGCQLASVTV- 74
Query: 170 YGVANIL 176
+G+ +
Sbjct: 75 HGIQAKI 81
>gi|118474257|ref|YP_892817.1| nitrogen fixation protein NifU [Campylobacter fetus subsp. fetus
82-40]
gi|118413483|gb|ABK81903.1| nitrogen fixation protein NifU [Campylobacter fetus subsp. fetus
82-40]
Length = 333
Score = 61.0 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYR----DGIV--FLSMRGACSGCPSASETLKYG 171
++ ++ V+D +RP + DGG++ + DG + ++ GACSGC S + Y
Sbjct: 256 LKAVEAVIDENIRPMLVMDGGNMEILDIKKEDADGKIDIYIRYLGACSGCASGATGTLYA 315
Query: 172 VANILNH 178
+ NIL
Sbjct: 316 IENILQE 322
>gi|261419987|ref|YP_003253669.1| Scaffold protein Nfu/NifU [Geobacillus sp. Y412MC61]
gi|319766802|ref|YP_004132303.1| Scaffold protein Nfu/NifU [Geobacillus sp. Y412MC52]
gi|261376444|gb|ACX79187.1| Scaffold protein Nfu/NifU [Geobacillus sp. Y412MC61]
gi|317111668|gb|ADU94160.1| Scaffold protein Nfu/NifU [Geobacillus sp. Y412MC52]
Length = 381
Score = 61.0 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEIS-PLASRIFSIPGIASVYFGY 58
M IQ E TP+P T+K + + L G H + PL + I G+ +Y
Sbjct: 1 MRIQAIEPTPSPNTMKILLDEE-LPSGTRHNYKPDNIGEAPPLIQALMRIDGVKGIYHVA 59
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGL 97
DF+ + + +YDW + V + E G G
Sbjct: 60 DFLAIERHPKYDWRDILAKVREVFGEKADDGAEAKPKGNE 99
>gi|237807436|ref|YP_002891876.1| Fe-S cluster assembly protein NifU [Tolumonas auensis DSM 9187]
gi|237499697|gb|ACQ92290.1| Fe-S cluster assembly protein NifU [Tolumonas auensis DSM 9187]
Length = 297
Score = 61.0 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Query: 96 GLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMR 155
M+ + + + + VL+ +RP + DGGD+ + V +++
Sbjct: 198 ATTSMERSKVAPHVDLAKKDENWRTVAAVLEE-MRPRLQADGGDVTLISVTESKVEVALS 256
Query: 156 GACSGCPSASETLKYGVANILNHF 179
G+C GC T+ + L
Sbjct: 257 GSCLGCMMTDMTI-AWIQQTLMEK 279
>gi|297530054|ref|YP_003671329.1| Scaffold protein Nfu/NifU [Geobacillus sp. C56-T3]
gi|297253306|gb|ADI26752.1| Scaffold protein Nfu/NifU [Geobacillus sp. C56-T3]
Length = 381
Score = 61.0 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEIS-PLASRIFSIPGIASVYFGY 58
M IQ E TP+P T+K + + L G H + PL + I G+ +Y
Sbjct: 1 MRIQAIEPTPSPNTMKILLDEE-LPSGTRHNYKPDNIGEAPPLIQALMRIDGVKGIYHVA 59
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGL 97
DF+ + + +YDW + V + E G G
Sbjct: 60 DFLAIERHPKYDWRDILAKVREVFGEKADDGAEAKPKGNE 99
>gi|170292214|pdb|2K1H|A Chain A, Solution Nmr Structure Of Ser13 From Staphylococcus
Epidermidis. Northeast Structural Genomics Consortium
Target Ser13
Length = 94
Score = 61.0 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I +TPN T+K + ++ A+E + +R+F I G+ S+++ DFI+
Sbjct: 4 IAISETPNHNTMKVSLSEPRQDNSFTTYTAAQEGQ-PEFINRLFEIEGVKSIFYVLDFIS 62
Query: 63 VGK-DQYDWEHLRPPV 77
+ K D +W L P +
Sbjct: 63 IDKEDNANWNELLPQI 78
>gi|255323222|ref|ZP_05364357.1| NifU family protein [Campylobacter showae RM3277]
gi|255299745|gb|EET79027.1| NifU family protein [Campylobacter showae RM3277]
Length = 330
Score = 61.0 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 11/96 (11%)
Query: 94 NGGLGDMKLDDMGSGDFIE---SDSAVVQR---IKEVLDNRVRPAVARDGGDIVFKGYRD 147
+D SG F + + VV + I+ V+D VRP + DGG++ +
Sbjct: 224 EQEKKQAIIDAQVSGKFDDVSFENMTVVGQLKAIESVIDRDVRPMLMMDGGNMEILDLQK 283
Query: 148 G-----IVFLSMRGACSGCPSASETLKYGVANILNH 178
V++ GACSGC S + Y + N+L
Sbjct: 284 DAEGKFDVYIRYMGACSGCASGATGTLYAIENVLQE 319
>gi|146277303|ref|YP_001167462.1| NifU domain-containing protein [Rhodobacter sphaeroides ATCC 17025]
gi|145555544|gb|ABP70157.1| nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides ATCC
17025]
Length = 241
Score = 61.0 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
S + I EV++ VRP + DGGD+ V + + GACSGC A+ TL G+
Sbjct: 155 SPEEEARLIAEVIET-VRPRLRADGGDVTLLAVDGSKVRVHLTGACSGCQLAALTL-GGL 212
Query: 173 ANIL 176
L
Sbjct: 213 QKRL 216
>gi|119963151|ref|YP_946666.1| NifU-like domain-containing protein [Arthrobacter aurescens TC1]
gi|119950010|gb|ABM08921.1| putative NifU-like domain protein [Arthrobacter aurescens TC1]
Length = 134
Score = 61.0 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+ + ++E L + +RP + GD+ DG+V + AC CP+ S T V +
Sbjct: 9 PLEEDLQEAL-SYIRPLLKGHSGDLTIAAVDDGVVTVDFHNACHSCPAISVTFAGLVRSR 67
Query: 176 LNHFVPEVKDIRT 188
L V VKD+R+
Sbjct: 68 LMQ-VDGVKDVRS 79
>gi|154173662|ref|YP_001407485.1| NifU family protein [Campylobacter curvus 525.92]
gi|112802143|gb|EAT99487.1| NifU family protein [Campylobacter curvus 525.92]
Length = 330
Score = 60.6 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETLKYGV 172
++ ++ V+D +RP + DGG++ R V++ GACSGC S + Y +
Sbjct: 254 LKAVESVIDQEIRPMLMMDGGNLEILDIRKDNDQNVDVYIRYLGACSGCASGAGGTLYAI 313
Query: 173 ANILNH 178
N+L
Sbjct: 314 ENVLQE 319
>gi|292654247|ref|YP_003534144.1| NifU-like domain-containing protein [Haloferax volcanii DS2]
gi|291371420|gb|ADE03647.1| NifU-like domain protein [Haloferax volcanii DS2]
Length = 125
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSA 164
S + + + + +R+ L P + GG + G V + + GACSGC +
Sbjct: 2 STETQDGEDDLKERVVNFLRRNF-PQIQMHGGSAAIRDLDRETGEVTVLLGGACSGCGIS 60
Query: 165 SETLKYGVANILNHFVPEVKDIRT 188
T+ + + +PE+ ++
Sbjct: 61 PMTI-QAIKTRMVKEIPEINEVHA 83
>gi|289550836|ref|YP_003471740.1| hypothetical protein SLGD_01522 [Staphylococcus lugdunensis
HKU09-01]
gi|315658333|ref|ZP_07911205.1| scaffold protein Nfu/NifU N [Staphylococcus lugdunensis M23590]
gi|289180368|gb|ADC87613.1| hypothetical protein SLGD_01522 [Staphylococcus lugdunensis
HKU09-01]
gi|315496662|gb|EFU84985.1| scaffold protein Nfu/NifU N [Staphylococcus lugdunensis M23590]
Length = 84
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
M I+ +TPN T+K + + +++A + + +R+F I G+ S+++ D
Sbjct: 1 MQIEAISETPNQNTIKITLSEKRSDNKSDTYTHAADGQ-PEFINRLFDIEGVTSIFYVMD 59
Query: 60 FITVGKD-QYDWEHLRPPVLG 79
FI+V K+ DW+ L P +
Sbjct: 60 FISVDKENDKDWDELIPKIQE 80
>gi|270610576|ref|ZP_06221672.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270318075|gb|EFA29333.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
Length = 141
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 42/132 (31%), Gaps = 8/132 (6%)
Query: 22 VLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG- 79
+ HF + + RIF + PG + G + + ++
Sbjct: 10 ISDAAQAHFRKLLDTQEEGTNIRIFVVNPGTPNAECGVSYCPPNAVEESDVEIKYDTFSA 69
Query: 80 MIME----HFISGDPIIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNRVRPAV 133
I E + LG + + D+ +++R++ V+ ++ P +
Sbjct: 70 FIDEVSLPFLEEAEIDYVTEELGAQLTLKAPNAKMRKVADDAPLIERVEYVIQTQINPQL 129
Query: 134 ARDGGDIVFKGY 145
A GG I
Sbjct: 130 ASHGGRITLIEI 141
>gi|224476560|ref|YP_002634166.1| hypothetical protein Sca_1073 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421167|emb|CAL27981.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 372
Score = 60.6 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + ++ KE + + + + G+ S+++ DF+
Sbjct: 4 VRIEPTPSPNTMKVVLNKQREDNQSSTYTAVKEGQ-PEFINHLLDLEGVKSIFYVIDFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGD 89
+ K + DWE + P + ++ E +G
Sbjct: 63 IDKTPKADWEEVLPKITAVLNEDAGAGK 90
>gi|332299648|ref|YP_004441569.1| nitrogen-fixing NifU domain-containing protein [Porphyromonas
asaccharolytica DSM 20707]
gi|332176711|gb|AEE12401.1| nitrogen-fixing NifU domain-containing protein [Porphyromonas
asaccharolytica DSM 20707]
Length = 97
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
S+ V I ++ + VRP + GGDI VF+ + G+C CPS S T++ V
Sbjct: 3 DLSSRVDEITTIISSYVRPQLQAHGGDIALLRVAGEQVFVKVSGSCQACPSLSSTIREVV 62
Query: 173 ANILN 177
L
Sbjct: 63 QETLR 67
>gi|257470226|ref|ZP_05634317.1| hypothetical protein FulcA4_12862 [Fusobacterium ulcerans ATCC
49185]
gi|317064440|ref|ZP_07928925.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
gi|313690116|gb|EFS26951.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
Length = 92
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDG--IVFLSMRGACSGCPSASETLKYGVANI 175
+ +I++ LD +RP + + GDI + Y + + L + G C CP + +T + +
Sbjct: 1 MDKIEKFLDEEIRPELRKHNGDISVEEYDEKNRKLVLRLMGQCCTCPHSIDTSENFIKIS 60
Query: 176 LNHFVPEVK 184
+ PE++
Sbjct: 61 VREKFPEIE 69
>gi|6226659|sp|P46045|NIFU_FRAAL RecName: Full=Nitrogen fixation protein nifU
gi|3953455|gb|AAC82977.1| NifU [Frankia alni]
Length = 71
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
Query: 127 NRVRPAVARDGGDIVFKGYRDGI------VFLSMRGACSGCPSASETLKYGVANILNHFV 180
+RP + DGG G V L + GAC GC SA+ TL + L +
Sbjct: 2 EEIRPMLRGDGGTPRSSPSSRGRSAGSAEVHLRLTGACGGCSSANATLTGVIEARLRQQL 61
Query: 181 PEVKDIRTV 189
PE+ + V
Sbjct: 62 PEIGRVALV 70
>gi|288818611|ref|YP_003432959.1| nitrogen-fixing NifU domain protein [Hydrogenobacter thermophilus
TK-6]
gi|288788011|dbj|BAI69758.1| nitrogen-fixing NifU domain protein [Hydrogenobacter thermophilus
TK-6]
gi|308752202|gb|ADO45685.1| nitrogen-fixing NifU domain protein [Hydrogenobacter thermophilus
TK-6]
Length = 83
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+ ++++L ++RPA+ GD+ ++G V+L G C+ CP +LK V +
Sbjct: 7 REVEDIL-KKMRPALKDHHGDLKVVEIKEGNVYLQFEGGCTECPIVDASLKEVVDMAIRG 65
Query: 179 FVPEVKDIR 187
+ VK +
Sbjct: 66 NLSWVKKVE 74
>gi|15791138|ref|NP_280962.1| hypothetical protein VNG2337C [Halobacterium sp. NRC-1]
gi|169236893|ref|YP_001690093.1| hypothetical protein OE4292F [Halobacterium salinarum R1]
gi|10581748|gb|AAG20442.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
gi|167727959|emb|CAP14747.1| conserved hypothetical protein [Halobacterium salinarum R1]
Length = 116
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGV 172
S + +R+ L P + GG + DG+V L + GACSGC + T+ +
Sbjct: 9 SDLEERVDNFLRRNF-PQIQMHGGTAAVQNINREDGVVDLQLGGACSGCGISPMTI-QAI 66
Query: 173 ANILNHFVPEVKDI 186
+ + +PE+ +
Sbjct: 67 KSRMTKEIPEIDVV 80
>gi|313887418|ref|ZP_07821107.1| NifU-like protein [Porphyromonas asaccharolytica PR426713P-I]
gi|312923060|gb|EFR33880.1| NifU-like protein [Porphyromonas asaccharolytica PR426713P-I]
Length = 97
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 31/65 (47%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
S+ V I ++ + VRP + GGDI VF+ + G+C CPS S T++ V
Sbjct: 3 DLSSRVDEITTIISSYVRPQLQAHGGDIALLRVAGEEVFVKVSGSCQACPSLSSTIREVV 62
Query: 173 ANILN 177
L
Sbjct: 63 QETLR 67
>gi|209963814|ref|YP_002296729.1| Fe-S cluster assembly protein NifU [Rhodospirillum centenum SW]
gi|209957280|gb|ACI97916.1| Fe-S cluster assembly protein NifU [Rhodospirillum centenum SW]
Length = 326
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASET 167
++ I+E + RP DGGD V + + GAC+GC A T
Sbjct: 257 IRLIEEAIAE-ARPTFLADGGDCELVDVDGRHVHVRLTGACAGCRMARMT 305
>gi|55378751|ref|YP_136601.1| NifU-like domain-containing protein [Haloarcula marismortui ATCC
43049]
gi|55231476|gb|AAV46895.1| NifU-like domain protein [Haloarcula marismortui ATCC 43049]
Length = 108
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 131 PAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P + + GG+ + + G +++ GACSGC A T+K + L V ++D+
Sbjct: 19 PQIQQHGGNFEVREVDESKGTATVAIGGACSGCGIAPMTMK-AIEQRLPESVDGLEDVEV 77
Query: 189 V 189
V
Sbjct: 78 V 78
>gi|257051984|ref|YP_003129817.1| nitrogen-fixing NifU domain protein [Halorhabdus utahensis DSM
12940]
gi|256690747|gb|ACV11084.1| nitrogen-fixing NifU domain protein [Halorhabdus utahensis DSM
12940]
Length = 121
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSA 164
S + E S + QR+ L P + GG + + G V + + GACSGC +
Sbjct: 2 STESQEGSSDLEQRVVNFLRRNF-PQIQMHGGSAAVQDLDEEAGEVTIMLGGACSGCGIS 60
Query: 165 SETLKYGVANILNHFVPEVKDIRT 188
T+ + + + +PE+ +
Sbjct: 61 PMTV-QAIKSRMTKEIPEINTVHA 83
>gi|23098646|ref|NP_692112.1| hypothetical protein OB1191 [Oceanobacillus iheyensis HTE831]
gi|22776873|dbj|BAC13147.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 87
Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFS-NAKEAEISPLASRIFSIPGIASVYFGYD 59
M + TPNP +K+ + V+ EG S + + + + + +V+ +
Sbjct: 1 MGVHISATPNPNAMKY-TSEKVIFEGTNSISVMPGNTSEYEILNELMKLEEVDNVFGYQN 59
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEH 84
FITV K +WE L P V + +++
Sbjct: 60 FITVNKQFDAEWESLNPKVEELFVKY 85
>gi|73662619|ref|YP_301400.1| hypothetical protein SSP1310 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123775356|sp|Q49XP0|CVFC_STAS1 RecName: Full=Conserved virulence factor C
gi|72495134|dbj|BAE18455.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 372
Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + ++ + + + + ++ G+ S+++ DF+
Sbjct: 4 VRVEPTPSPNTMKIVLNEKRKDNKSNTYTTILDNQ-PKFINDVLAVDGVKSIFYVMDFLA 62
Query: 63 VG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD 103
V K +YDWE L P V + + S D + G++K +
Sbjct: 63 VDKKPKYDWEVLLPKVTATLSDESESIDTPAPDEHFGEVKAE 104
>gi|323703949|ref|ZP_08115578.1| nitrogen-fixing NifU domain protein [Desulfotomaculum nigrificans
DSM 574]
gi|323531084|gb|EGB20994.1| nitrogen-fixing NifU domain protein [Desulfotomaculum nigrificans
DSM 574]
Length = 44
Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD-GIVFLSMRGACSG 160
+ +++KE L+ ++RP + RDGGD+ D G+V + +RGAC G
Sbjct: 1 MREKVKEALE-KIRPFLQRDGGDVELVDVDDNGVVKVKLRGACGG 44
>gi|303270897|ref|XP_003054810.1| iron-sulfur cluster scaffold protein, plastid precursor [Micromonas
pusilla CCMP1545]
gi|226462784|gb|EEH60062.1| iron-sulfur cluster scaffold protein, plastid precursor [Micromonas
pusilla CCMP1545]
Length = 406
Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
V+ + + LD VRP + DGG++ G DG+V + M GAC C S++ TLK G+ L
Sbjct: 254 TVENVDKALDE-VRPYLIADGGNVAVVGIEDGVVAVRMSGACGSCSSSTATLKGGIEKTL 312
Query: 177 NHFVPE--VKDIRT 188
VK++
Sbjct: 313 RRVFGGENVKEVVN 326
>gi|322371460|ref|ZP_08046009.1| nitrogen-fixing NifU domain protein [Haladaptatus paucihalophilus
DX253]
gi|320548992|gb|EFW90657.1| nitrogen-fixing NifU domain protein [Haladaptatus paucihalophilus
DX253]
Length = 119
Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGD--IVFKGYRDGIVFLSMRGACSGCPSA 164
S + E + +R+ L P + GG I G V + + GACSGC +
Sbjct: 2 STETQEDGDDLEERVSNFLRRNF-PQIQMHGGSAAIQQIDRETGEVTIMLGGACSGCGIS 60
Query: 165 SETLKYGVANILNHFVPEVKDIRT 188
T+ + + + +PE+ +
Sbjct: 61 PMTI-QAIKSRMVKEIPEINKVIA 83
>gi|300785672|ref|YP_003765963.1| thioredoxin-like protein [Amycolatopsis mediterranei U32]
gi|299795186|gb|ADJ45561.1| thioredoxin-like protein [Amycolatopsis mediterranei U32]
Length = 174
Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Query: 71 EHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDM-GSGDFIESDSAVVQRIKEVLDNRV 129
L L I+ P + D + + D D+ R++ LD R+
Sbjct: 40 TDLYGEGLTRIVGTLREHAPALVGAIAADDVVASLLALHDLHPLDAQ--ARVRRALD-RI 96
Query: 130 RPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
RP V G + + G DG+V LS+ GA GC SA+ T + V + PEV + V
Sbjct: 97 RPQV----GAVGYLGIDDGVVRLSL-GASRGCSSAARTARATVEAAVRDAAPEVSGVEIV 151
>gi|1480126|emb|CAA68019.1| nifU [Pantoea agglomerans]
Length = 275
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 8/86 (9%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLS 153
L + + + + + + V+ + L RP + DGGD+ V +
Sbjct: 184 EEILKEHPVKNPVAAKVRDENWLAVEEVVASL----RPHIRADGGDMSLVRVDGQEVTVE 239
Query: 154 MRGACSGCPSASETL----KYGVANI 175
+ G+CSGC TL + V +
Sbjct: 240 LSGSCSGCMMTDMTLAWLQQKLVERM 265
>gi|330685005|gb|EGG96680.1| scaffold protein Nfu/NifU N-terminal domain protein
[Staphylococcus epidermidis VCU121]
Length = 84
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 7 DTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK- 65
+TPN T+K + + +++A+E + + +F I G+ S+++ DFI+V K
Sbjct: 8 ETPNHNTMKITLSESREDMKSNTYTSAEEGQ-PEFINALFDIEGVKSIFYVMDFISVDKE 66
Query: 66 DQYDWEHLRPPV 77
DQ DW+ L P +
Sbjct: 67 DQADWQTLIPQI 78
>gi|332971712|gb|EGK10660.1| PBS lyase HEAT domain protein repeat-containing protein [Desmospora
sp. 8437]
Length = 376
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 10/111 (9%)
Query: 1 MFIQ-TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
M I+ E TP+P +K + V + +A R+ +I G+ S++ D
Sbjct: 1 MKIRSIEPTPSPNAMKLNMDERVSGGKTYTRDSQDQA--PDYIRRLLAIGGVKSLFQVAD 58
Query: 60 FITVGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD 109
FI+V +D + DW+ + P V + G+ + G D G G+
Sbjct: 59 FISVERDPKADWKQILPRVREV------FGEEVTETHGTTDGYEPTQGYGE 103
>gi|154244065|ref|YP_001415023.1| NifU domain-containing protein [Xanthobacter autotrophicus Py2]
gi|154158150|gb|ABS65366.1| nitrogen-fixing NifU domain protein [Xanthobacter autotrophicus
Py2]
Length = 121
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I+EV++ +RP + RDGGD V + M GAC C ASET+ G+ + +
Sbjct: 21 IREVIEE-IRPNLKRDGGDCELVEIDGNKVMVKMTGACVFCKLASETI-EGIQTKIVERL 78
Query: 181 PEVKDIRTV 189
E+ + V
Sbjct: 79 GELIRLIPV 87
>gi|304405239|ref|ZP_07386899.1| PBS lyase HEAT domain protein repeat-containing protein
[Paenibacillus curdlanolyticus YK9]
gi|304346118|gb|EFM11952.1| PBS lyase HEAT domain protein repeat-containing protein
[Paenibacillus curdlanolyticus YK9]
Length = 389
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASR-IFSIPGIASVYFGYDFITV 63
E TP+P ++K + +L G H A +P R + +I G+ SV+ DFI +
Sbjct: 6 IEPTPSPNSMK-LNVDEMLPRGLRHTYTPDRASEAPEPLRDLLAIEGVRSVFRTADFIAL 64
Query: 64 G-KDQYDWEHLRPPVLGMI 81
K DW+ + ++
Sbjct: 65 DRKPNADWQAILAEARRLL 83
>gi|282891004|ref|ZP_06299509.1| hypothetical protein pah_c045o002 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498997|gb|EFB41311.1| hypothetical protein pah_c045o002 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 261
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 51/117 (43%), Gaps = 10/117 (8%)
Query: 77 VLGMIMEHFIS--GDPIIHN--GGLGDMKLDDMGSGDFIESDSAVVQR----IKEVLDNR 128
+L I + F G P+ + ++ ++ G + +++ I+E+++
Sbjct: 135 ILSAIEDAFEKCIGIPVAESYIAPPVPSEIGEVVEGGYPGWKELTIKKKIAVIEEIMNRD 194
Query: 129 VRPAVARDGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYGVANILNHFV-PEV 183
+RP +A DGG + D + + +G C+ C S+ T + +L V P++
Sbjct: 195 IRPYIALDGGGVEVLNILEDREIVIGYQGNCTSCYSSIGTTLSYIQQVLRAKVYPDI 251
>gi|239636890|ref|ZP_04677889.1| conserved virulence factor C [Staphylococcus warneri L37603]
gi|239597564|gb|EEQ80062.1| conserved virulence factor C [Staphylococcus warneri L37603]
Length = 371
Score = 59.0 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + ++ + + + + + G+ S+++ DF+
Sbjct: 4 LRVEPTPSPNTMKVVLTEKRQDNQSNTYTTIND-QQPQFINDLLELDGVKSIFYVMDFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD 103
+ K + DWE + P + + + S + G++K +
Sbjct: 63 IDKQPKADWEDVLPLITSTLNKEEHSQQETQPDEHFGEVKAE 104
>gi|15614281|ref|NP_242584.1| hypothetical protein BH1718 [Bacillus halodurans C-125]
gi|10174335|dbj|BAB05437.1| BH1718 [Bacillus halodurans C-125]
Length = 380
Score = 59.0 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 1 MFIQ-TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
M IQ E TP+P T+K Q + + +++ + E P ++F I G+ VY D
Sbjct: 1 MNIQSIEPTPSPNTMKLTLDQTLPQGKSNNYTLKNKEEAPPFIQKLFEIEGVKGVYHVAD 60
Query: 60 FITVGKDQ-YDWEHLRPPVLGM 80
F+ + ++ DW+ + P V +
Sbjct: 61 FLAIERNAKVDWKVILPKVRAV 82
>gi|229544329|ref|ZP_04433388.1| HEAT domain containing protein [Bacillus coagulans 36D1]
gi|229325468|gb|EEN91144.1| HEAT domain containing protein [Bacillus coagulans 36D1]
Length = 374
Score = 59.0 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
M I+ E TP+P T+K + + + ++ +E + P+ RI I G+ VY D
Sbjct: 1 MKIKAIEPTPSPNTMKVVLTEALPDGARSNYKKGQEEGVPPVIRRILDIEGVKGVYHVAD 60
Query: 60 FITVGKDQ-YDWEHLRPPVLGM 80
F+ V + DW+ + P V +
Sbjct: 61 FLAVERHGKTDWQDILPKVREV 82
>gi|120403404|ref|YP_953233.1| NifU domain-containing protein [Mycobacterium vanbaalenii PYR-1]
gi|119956222|gb|ABM13227.1| nitrogen-fixing NifU domain protein [Mycobacterium vanbaalenii
PYR-1]
Length = 297
Score = 59.0 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 120 RIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHF 179
R+ + LD+ VRP + GGD+ G DG+V L +G+CS CPS+S TL+ V + +
Sbjct: 95 RVNDALDS-VRPYLGSHGGDVSLLGVTDGVVRLRFQGSCSSCPSSSVTLELAVQDAILAA 153
Query: 180 VPEVKDIRTV 189
PE+ DI V
Sbjct: 154 APEIVDIELV 163
>gi|83314468|ref|XP_730372.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23490077|gb|EAA21937.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 168
Score = 59.0 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ E +S +++ ++ RP + D G + + +++ + G C C S S
Sbjct: 1 EELYYELNSENTEKVLNLI----RPKLQIDNGGVELVDIKGNNLYIRLLGNCITCSSNSV 56
Query: 167 TLKYGVANILNHFV 180
T+ + L ++
Sbjct: 57 TVSQVIKKTLKMYI 70
>gi|289548747|ref|YP_003473735.1| nitrogen-fixing NifU domain protein [Thermocrinis albus DSM 14484]
gi|289182364|gb|ADC89608.1| nitrogen-fixing NifU domain protein [Thermocrinis albus DSM 14484]
Length = 83
Score = 59.0 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 114 DSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
+ ++ ++ VL+ ++RPA+ G++ R+G ++L G C+ CP ++K V
Sbjct: 2 EEEKLREVEAVLE-KIRPALKEHHGNLKVVDIREGEIYLQFEGGCTDCPIVDASVKDVVD 60
Query: 174 NILNHFVPEVKDIRTV 189
+ +P + + V
Sbjct: 61 IAIRGNIPWAQKVEIV 76
>gi|319892430|ref|YP_004149305.1| PBS lyase HEAT-like repeat domain protein [Staphylococcus
pseudintermedius HKU10-03]
gi|317162126|gb|ADV05669.1| PBS lyase HEAT-like repeat domain protein [Staphylococcus
pseudintermedius HKU10-03]
gi|323464467|gb|ADX76620.1| conserved virulence factor C [Staphylococcus pseudintermedius
ED99]
Length = 372
Score = 59.0 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I+ E TP+P T+K I + + ++ +++ + I + G+ SV+ DFI
Sbjct: 4 IKVEPTPSPNTMKIILSEKRQDNHSKTYTEVTDSQPH-FINAILQVKGVKSVFHVLDFIA 62
Query: 63 VGK-DQYDWEHLRPPVLGMI 81
V K + DWE + P V +
Sbjct: 63 VDKAPKADWETVLPLVTATL 82
>gi|56552729|ref|YP_163568.1| nitrogen-fixing NifU domain-containing protein [Zymomonas mobilis
subsp. mobilis ZM4]
gi|241762522|ref|ZP_04760598.1| nitrogen-fixing NifU domain protein [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260753632|ref|YP_003226525.1| nitrogen-fixing NifU domain protein [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|56544303|gb|AAV90457.1| nitrogen-fixing NifU domain protein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241372926|gb|EER62603.1| nitrogen-fixing NifU domain protein [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552995|gb|ACV75941.1| nitrogen-fixing NifU domain protein [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 80
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+V I+E +RP + RDGGD F D V + M G+C C ++ T+ +G+
Sbjct: 8 QDIVIAIEE-----IRPTLKRDGGDCEFICIEDNKVIVRMTGSCIQCQLSTLTV-HGIQK 61
Query: 175 ILNHFV 180
L +
Sbjct: 62 TLIDRI 67
>gi|261417255|ref|YP_003250938.1| nitrogen-fixing NifU domain protein [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261373711|gb|ACX76456.1| nitrogen-fixing NifU domain protein [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|302325479|gb|ADL24680.1| NifU-like protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 273
Score = 58.7 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 9/100 (9%)
Query: 90 PIIHNGGLGDMKLDDMGSGDFIESDSA--------VVQRIKEVLDNRVRPAVARDGGDIV 141
II + +K + E+D+ +++I+ L VR + DGGD+
Sbjct: 140 AIIVREKMERIKYRTQTAEGRAEADAEWNALTKVQKIEKIEAWLHQTVRGTLQGDGGDVQ 199
Query: 142 FKG-YRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
D + + +GAC+GC SA + + + L + V
Sbjct: 200 ILDLTDDNRLQIRYQGACAGCGSAMGGTLFYIEDELKNNV 239
>gi|70726478|ref|YP_253392.1| hypothetical protein SH1477 [Staphylococcus haemolyticus JCSC1435]
gi|123734994|sp|Q4L6D9|CVFC_STAHJ RecName: Full=Conserved virulence factor C
gi|68447202|dbj|BAE04786.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 370
Score = 58.7 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + F+ +E + + + +I G+ S+++ DF+
Sbjct: 4 LRVEPTPSPNTMKIVLSNKREDNKSNTFTYIEE-QQPQFINDLLAIDGVKSIFYVMDFLA 62
Query: 63 VGKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI-------ESD 114
+ K+ + DWE + P + + + G++K + + SD
Sbjct: 63 IDKEPKSDWEVVLPQITSTLNNESFIDSSHKPDEHYGEIKAEALMFKGIPYQIKLTTTSD 122
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVF 142
+ Q +++ ++ +DG ++VF
Sbjct: 123 ESRKQLPDYFVESMLK--AQKDGDNVVF 148
>gi|16079247|ref|NP_390071.1| lyase [Bacillus subtilis subsp. subtilis str. 168]
gi|221310102|ref|ZP_03591949.1| hypothetical protein Bsubs1_12046 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221314423|ref|ZP_03596228.1| hypothetical protein BsubsN3_11962 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319346|ref|ZP_03600640.1| hypothetical protein BsubsJ_11893 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323621|ref|ZP_03604915.1| hypothetical protein BsubsS_12017 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|1730911|sp|P54169|YPGR_BACSU RecName: Full=Uncharacterized protein ypgR
gi|1256634|gb|AAA96628.1| 25.8% identity over 120 aa with the Synenococcus sp. MpeV
protein; putative [Bacillus subtilis subsp. subtilis
str. 168]
gi|2634608|emb|CAB14106.1| putative lyase [Bacillus subtilis subsp. subtilis str. 168]
Length = 377
Score = 58.3 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 1 MFIQ-TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASR-IFSIPGIASVYFGY 58
M I+ E TP+P T+K I + L G + ++AE +PL I I G+ VY
Sbjct: 1 MKIKSIEPTPSPNTMKVILTEE-LPAGKSNNYKPEQAEGAPLVIAEILKIDGVKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVL-GMIMEHFISGDP 90
DF+ V ++ YDW+ + P V ME S +
Sbjct: 60 DFLAVERNARYDWKDILPQVRTAFGMESAESAEE 93
>gi|284166626|ref|YP_003404905.1| nitrogen-fixing NifU domain protein [Haloterrigena turkmenica DSM
5511]
gi|284016281|gb|ADB62232.1| nitrogen-fixing NifU domain protein [Haloterrigena turkmenica DSM
5511]
Length = 104
Score = 58.3 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGD--IVFKGYRDGIVFLSMRGACSGCPSA 164
S + V + + L P + GGD I +G V +++ GACSGC +
Sbjct: 2 SESAQSPEDEVREAVSLFLQRNF-PQIQAHGGDSSITAVDLEEGSVEINLTGACSGCGVS 60
Query: 165 SETLKYGVANILNHFVPEVKDI 186
T + L + E+ +
Sbjct: 61 PMTT-QAIQRRLPGEIDEIDYV 81
>gi|291484607|dbj|BAI85682.1| hypothetical protein BSNT_03263 [Bacillus subtilis subsp. natto
BEST195]
Length = 377
Score = 58.3 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 1 MFIQ-TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEIS-PLASRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + L G + ++AE + P+ I I G+ VY
Sbjct: 1 MKIKSIEPTPSPNTMKVILTEE-LPAGKSNNYKPEQAEGAPPVIEEILKIDGVKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVL-GMIMEHFISGDP 90
DF+ V ++ YDW+ + P V ME SG+
Sbjct: 60 DFLAVERNARYDWKDILPQVRTAFGMESAESGEE 93
>gi|146342270|ref|YP_001207318.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp.
ORS278]
gi|146195076|emb|CAL79101.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp.
ORS278]
Length = 96
Score = 58.3 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 102 LDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGC 161
++ G + S + I+ V++ VRP + RDGGD + + + GAC C
Sbjct: 3 VETQGVVEAPAQMSERERIIRAVIEE-VRPNLKRDGGDCELVEIDGNKIMVKLAGACIFC 61
Query: 162 PSASETLKYGVANILNHFVPEVKDIRTV 189
AS TL G+ + + E + V
Sbjct: 62 KLASATL-EGIQARMIEKLGEFVRLVPV 88
>gi|149194816|ref|ZP_01871910.1| nifu-like protein [Caminibacter mediatlanticus TB-2]
gi|149134975|gb|EDM23457.1| nifu-like protein [Caminibacter mediatlanticus TB-2]
Length = 89
Score = 58.3 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI----VFLSMRGACSGCPSASETLKYG 171
++ I+EVL + P +A DGG R+ V++ GAC+ C SA +
Sbjct: 11 EKIEAIEEVLKKDIMPMLAFDGGYAEIVDVRESNGETHVYIRYGGACAACSSAGGATLFA 70
Query: 172 VANILNHFV 180
+ L +
Sbjct: 71 IEETLRKRL 79
>gi|148257171|ref|YP_001241756.1| putative nifU protein [Bradyrhizobium sp. BTAi1]
gi|146409344|gb|ABQ37850.1| putative nifU protein [Bradyrhizobium sp. BTAi1]
Length = 96
Score = 58.3 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 119 QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNH 178
+RI + VRP + RDGGD + + + GAC C AS TL G+ +
Sbjct: 19 ERIIRAVIEEVRPNLKRDGGDCELVEIDGNKIMVKLAGACIFCKLASATL-EGIQARMIE 77
Query: 179 FVPEVKDIRTV 189
+ E + V
Sbjct: 78 KLGEFVRLVPV 88
>gi|260575668|ref|ZP_05843665.1| nitrogen-fixing NifU domain protein [Rhodobacter sp. SW2]
gi|259022066|gb|EEW25365.1| nitrogen-fixing NifU domain protein [Rhodobacter sp. SW2]
Length = 240
Score = 57.9 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 111 IESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
++A V RI E ++R DGGD+ + V + + GAC GC AS TL
Sbjct: 164 PAEEAAEVARILE----QMRAVFRADGGDVELMEFSGSRVQVHLTGACKGCQMASLTL 217
>gi|134300122|ref|YP_001113618.1| NifU domain-containing protein [Desulfotomaculum reducens MI-1]
gi|134052822|gb|ABO50793.1| nitrogen-fixing NifU domain protein [Desulfotomaculum reducens
MI-1]
Length = 45
Score = 57.9 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSG 160
+ +R++E L+ +VRP + RDGGD+ G + GIV + ++GAC G
Sbjct: 1 MRERVQEALE-KVRPFLQRDGGDVELVGVDETSGIVKVKLKGACGG 45
>gi|284166941|ref|YP_003405220.1| nitrogen-fixing NifU domain protein [Haloterrigena turkmenica DSM
5511]
gi|284016596|gb|ADB62547.1| nitrogen-fixing NifU domain protein [Haloterrigena turkmenica DSM
5511]
Length = 123
Score = 57.9 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSA 164
S + + R+ L P + GG + G V +++ GACSGC +
Sbjct: 2 STESQNDGDDLEDRVANFLRRNF-PQIQMHGGSAAIQDIDRESGEVSIALGGACSGCGIS 60
Query: 165 SETLKYGVANILNHFVPEVKDI 186
T+ + + + +PE++ +
Sbjct: 61 PMTI-QAIKSRMVKEIPEIETV 81
>gi|223043275|ref|ZP_03613322.1| conserved virulence factor C [Staphylococcus capitis SK14]
gi|222443486|gb|EEE49584.1| conserved virulence factor C [Staphylococcus capitis SK14]
Length = 370
Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + ++ +E + + + + G+ S+++ DF+
Sbjct: 4 VRVEPTPSPNTMKIVLSEKREDNQSNTYTEVRENQ-PQFINDLLKLEGVKSIFYVMDFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD 103
+ K + +WE + P + + + G+++ +
Sbjct: 63 IDKQPKANWEDVLPQITSTLNNESSYNQEPQPDEHYGEVRAE 104
>gi|314933619|ref|ZP_07840984.1| putative HEAT repeat [Staphylococcus caprae C87]
gi|313653769|gb|EFS17526.1| putative HEAT repeat [Staphylococcus caprae C87]
Length = 370
Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + ++ +E + + + + G+ S+++ DF+
Sbjct: 4 VRVEPTPSPNTMKIVLSEKREDNQSNTYTEVRENQ-PQFINDLLKLEGVKSIFYVMDFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD 103
+ K + +WE + P + + + G+++ +
Sbjct: 63 IDKQPKANWEDVLPQITSTLNNESSYNQEPQPDEHYGEVRAE 104
>gi|300709486|ref|YP_003735300.1| nitrogen-fixing NifU domain protein [Halalkalicoccus jeotgali B3]
gi|299123169|gb|ADJ13508.1| nitrogen-fixing NifU domain protein [Halalkalicoccus jeotgali B3]
Length = 120
Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGD--IVFKGYRDGIVFLSMRGACSGCPSA 164
S + E+D + R+ L P + GG I G V + + GACSGC +
Sbjct: 2 STETQEADD-LNDRVMNFLRRNF-PQIQMHGGSAAIQNLDRESGEVTIQLGGACSGCGIS 59
Query: 165 SETLKYGVANILNHFVPEVKDIRT 188
T+ + + + +PE+ +
Sbjct: 60 PMTI-QAIKSRMVKEIPEINQVHA 82
>gi|228469892|ref|ZP_04054831.1| Fe-S cluster assembly protein NifU [Porphyromonas uenonis 60-3]
gi|228308527|gb|EEK17315.1| Fe-S cluster assembly protein NifU [Porphyromonas uenonis 60-3]
Length = 97
Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 32/68 (47%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
S+ V I ++ + VRP + GGDI VF+ + G+C CPS S T++ V
Sbjct: 3 DLSSRVDEITTIISSYVRPQLLAHGGDIALLRVAGEQVFVKVSGSCQACPSLSSTIQEVV 62
Query: 173 ANILNHFV 180
L +
Sbjct: 63 QETLRSEL 70
>gi|206576904|ref|YP_002237557.1| Fe-S cluster assembly protein NifU [Klebsiella pneumoniae 342]
gi|288934473|ref|YP_003438532.1| Fe-S cluster assembly protein NifU [Klebsiella variicola At-22]
gi|290508675|ref|ZP_06548046.1| Fe-S cluster assembly protein NifU [Klebsiella sp. 1_1_55]
gi|206565962|gb|ACI07738.1| Fe-S cluster assembly protein NifU [Klebsiella pneumoniae 342]
gi|255761126|gb|ACU32726.1| Fe-S cluster assembly protein NifU [Klebsiella variicola At-22]
gi|289778069|gb|EFD86066.1| Fe-S cluster assembly protein NifU [Klebsiella sp. 1_1_55]
Length = 279
Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 10/91 (10%)
Query: 89 DPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG 148
I+ + + + +VV I E+ RP + DGGD+
Sbjct: 184 AAILAQQPPAPLPAETAHDAHWQ----SVVDTINEL-----RPHIQADGGDMTLLNVTPR 234
Query: 149 IVFLSMRGACSGCPSASETLKYGVANILNHF 179
V +S+ G+CSGC TL + L
Sbjct: 235 QVTVSLSGSCSGCMMTDMTL-AWLQQKLMER 264
>gi|307132752|ref|YP_003884768.1| Iron-sulfur cluster assembly scaffold protein NifU [Dickeya
dadantii 3937]
gi|306530281|gb|ADN00212.1| Iron-sulfur cluster assembly scaffold protein NifU [Dickeya
dadantii 3937]
Length = 275
Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 100 MKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACS 159
+ + + I A Q++ E + +RP + DGGD+ + V +S+ G+C+
Sbjct: 188 SEHEATPAAAAIVVKDARWQQVAEAVAE-LRPHIQADGGDMSLVNVSERQVTVSLSGSCN 246
Query: 160 GCPSASETL 168
GC TL
Sbjct: 247 GCMMTDMTL 255
>gi|56963807|ref|YP_175538.1| hypothetical protein ABC2042 [Bacillus clausii KSM-K16]
gi|56910050|dbj|BAD64577.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 372
Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 6/140 (4%)
Query: 1 MFIQ-TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
M+I+ E TP+P T+K + + +AE ++F I GI VY D
Sbjct: 1 MYIRSIEPTPSPNTMKINLSEAAAGTSTT-YQEKNKAEAPTFIQQLFDIEGIKQVYHVGD 59
Query: 60 FITVGK-DQYDWEHLRPPVLGMIMEHFIS---GDPIIHNGGLGDMKLDDMGSGDFIESDS 115
F+ V + + DW+ + P + E G+ + G +++ S
Sbjct: 60 FLAVDRYPKADWKAILPQIRKQFGEEPDEQAKGNTLHDGYGEVHVQIQMFKGIPMQVKVS 119
Query: 116 AVVQRIKEVLDNRVRPAVAR 135
+ ++E L +R AVA+
Sbjct: 120 DGEEEVREGLPDRFAQAVAQ 139
>gi|50121870|ref|YP_051037.1| nitrogen fixation protein [Pectobacterium atrosepticum SCRI1043]
gi|49612396|emb|CAG75846.1| nitrogen fixation protein [Pectobacterium atrosepticum SCRI1043]
Length = 279
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 95 GGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSM 154
+ + + E +++ + + +V+ +RP + DGGD+ D V +S+
Sbjct: 184 AEIIEEQAALPEKFKVPEVETSAWRLVADVVAE-LRPYIQADGGDMALLNVSDHQVTVSL 242
Query: 155 RGACSGCPSASETL 168
G+C GC TL
Sbjct: 243 SGSCQGCMMTDMTL 256
>gi|115526511|ref|YP_783422.1| NifU domain-containing protein [Rhodopseudomonas palustris BisA53]
gi|115520458|gb|ABJ08442.1| nitrogen-fixing NifU domain protein [Rhodopseudomonas palustris
BisA53]
Length = 339
Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 2/95 (2%)
Query: 95 GGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSM 154
+ +I++ + VRP + RDGGD ++L +
Sbjct: 246 APTAMSRSKMPPPESRDRGTPEQYAQIEQAVQG-VRPNLQRDGGDCELIDVDGNTIYLKL 304
Query: 155 RGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
G C C AS T+ G+ + + + + V
Sbjct: 305 SGNCLDCQLASVTI-SGIQAQITEKLKRLFRVVPV 338
>gi|149343|gb|AAA25155.1| nifU encoded protein [Klebsiella pneumoniae]
Length = 274
Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+VV I E+ RP + DGGD+ + V +S+ G+CSGC TL +
Sbjct: 206 QSVVDTIAEL-----RPHIQADGGDMALLSVTNHQVTVSLSGSCSGCMMTDMTL-AWLQQ 259
Query: 175 ILNHFVPEVKDIRT 188
L ++
Sbjct: 260 KLMERTGCYMEVVA 273
>gi|128319|sp|P05343|NIFU_KLEPN RecName: Full=Nitrogen fixation protein nifU
gi|43830|emb|CAA31674.1| unnamed protein product [Klebsiella pneumoniae]
gi|43879|emb|CAA31117.1| nifU gene product (AA 1 - 274) [Klebsiella pneumoniae]
Length = 274
Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+VV I E+ RP + DGGD+ + V +S+ G+CSGC TL +
Sbjct: 206 QSVVDTIAEL-----RPHIQADGGDMALLSVTNHQVTVSLSGSCSGCMMTDMTL-AWLQQ 259
Query: 175 ILNHFVPEVKDIRT 188
L ++
Sbjct: 260 KLMERTGCYMEVVA 273
>gi|154686434|ref|YP_001421595.1| YpgR [Bacillus amyloliquefaciens FZB42]
gi|154352285|gb|ABS74364.1| YpgR [Bacillus amyloliquefaciens FZB42]
Length = 377
Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 1 MFIQ-TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISP-LASRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + L G + +A+ +P + I +I G+ VY
Sbjct: 1 MKIKSIEPTPSPNTMKVILTEE-LPAGKSNNYKPDQADDAPVVVRDILNIEGVKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGMI-MEHFISGDPIIHNGGLGDMKL 102
DF+ V ++ +DW+ + P V MEH + G++K+
Sbjct: 60 DFLAVERNARFDWKEILPQVRSAFGMEHTEQSESRSEQESFGEVKV 105
>gi|292654582|ref|YP_003534479.1| NifU-like domain-containing protein [Haloferax volcanii DS2]
gi|291370083|gb|ADE02310.1| NifU-like domain protein [Haloferax volcanii DS2]
Length = 657
Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 6/103 (5%)
Query: 90 PIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRV---RPAVARDGGDIVFK--G 144
+ G G S S + +KE ++ + P + GG+ V +
Sbjct: 524 AFLSPAGASGEPFHSNPWGSKHRSMSDESESLKERVETWMVGQMPIIQMHGGNSVVRKAD 583
Query: 145 YRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
G V + + GAC+GC ++ T + + + L E+ D++
Sbjct: 584 AESGEVVVELGGACAGCGISNITAQN-IQSDLIMTFDEITDVQ 625
>gi|52786069|ref|YP_091898.1| YpgR [Bacillus licheniformis ATCC 14580]
gi|163119502|ref|YP_079487.2| rhodopsin-like GPCR superfamily protein [Bacillus licheniformis
ATCC 14580]
gi|319645345|ref|ZP_07999578.1| YpgR protein [Bacillus sp. BT1B_CT2]
gi|52348571|gb|AAU41205.1| YpgR [Bacillus licheniformis ATCC 14580]
gi|145903009|gb|AAU23849.2| Rhodopsin-like GPCR superfamily protein [Bacillus licheniformis
ATCC 14580]
gi|317393154|gb|EFV73948.1| YpgR protein [Bacillus sp. BT1B_CT2]
Length = 378
Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 1 MFIQ-TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
M I+ E TP+P T+K I + + + ++ P+ + +I G+ VY D
Sbjct: 1 MKIKSIEPTPSPNTMKVILTEELPGGKSNNYKKDHAEGAPPVIQEVLNIDGVKGVYHVAD 60
Query: 60 FITVGKDQ-YDWEHLRPPVLGM 80
FI V ++ +DW+ + P V
Sbjct: 61 FIAVERNARFDWKDILPKVRAA 82
>gi|294498750|ref|YP_003562450.1| hypothetical protein BMQ_1987 [Bacillus megaterium QM B1551]
gi|294348687|gb|ADE69016.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
Length = 374
Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 1 MFIQ-TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISP-LASRIFSIPGIASVYFGY 58
M I+ E TP+P T+K + VL G + K AE +P + I + G+ VY
Sbjct: 1 MNIKSIEPTPSPNTMKINLDE-VLSGGKSNNYTEKNAEAAPEVVQDILKVEGVKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDP 90
DF+ V ++ YDW+ + P V E S
Sbjct: 60 DFLAVERNAKYDWKQILPQVRAAFGEDLQSNSE 92
>gi|147678467|ref|YP_001212682.1| hypothetical protein PTH_2132 [Pelotomaculum thermopropionicum SI]
gi|146274564|dbj|BAF60313.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
Length = 47
Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSG 160
A+ ++++EVL N+VRP + RDGGD+ G+V + ++GAC G
Sbjct: 3 AMKEKVQEVL-NKVRPFLQRDGGDVELVDVDASGLVKVRLKGACGG 47
>gi|257462848|ref|ZP_05627254.1| hypothetical protein FuD12_03281 [Fusobacterium sp. D12]
gi|317060474|ref|ZP_07924959.1| predicted protein [Fusobacterium sp. D12]
gi|313686150|gb|EFS22985.1| predicted protein [Fusobacterium sp. D12]
Length = 93
Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANI 175
+++I+E + ++ P++ GG + Y + L + G C CP + +T++ +
Sbjct: 1 MEKIQEYISTKIEPSLRDHGGSLEIVFYDKVKQELQLRLLGQCCSCPHSIDTVENFIKTG 60
Query: 176 LNHFVP 181
L P
Sbjct: 61 LQENFP 66
>gi|226311562|ref|YP_002771456.1| hypothetical protein BBR47_19750 [Brevibacillus brevis NBRC 100599]
gi|226094510|dbj|BAH42952.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 376
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 53/140 (37%), Gaps = 8/140 (5%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISP-LASRIFSIPGIASVYFGYDFITV 63
E TP+P +K + L +G H K+ +P L +++ I G+ S++ DF+ +
Sbjct: 6 IEPTPSPNVMK-LNVDERLPDGVQHVYTKKDTSKAPELMNKLLEIEGVTSIFHTADFLAL 64
Query: 64 -GKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV----- 117
K DW+ + ++ + P + G + F V
Sbjct: 65 ERKSNADWQRILTVAREVLHAGGGAAVPDLSAEDAGAFGEAQVYIQMFRGVPMQVKVTMG 124
Query: 118 VQRIKEVLDNRVRPAVARDG 137
++I+ L R A R G
Sbjct: 125 TEQIRAALPERFGQAAVRAG 144
>gi|56420319|ref|YP_147637.1| hypothetical protein GK1784 [Geobacillus kaustophilus HTA426]
gi|56380161|dbj|BAD76069.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 383
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 4/94 (4%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVG 64
E TP+P T+K + + + + ++ A P+ + I G+ +Y DF+ V
Sbjct: 8 IEPTPSPNTMKVLLDEELPFGTSHNYKPDNVAAAPPIIQALMRIEGVKGIYHVADFLAVE 67
Query: 65 K-DQYDWEHL---RPPVLGMIMEHFISGDPIIHN 94
+ +YDW + V G + P ++
Sbjct: 68 RHPKYDWRDILTKVREVFGEDVGEAEEEKPTVNE 101
>gi|289582169|ref|YP_003480635.1| nitrogen-fixing NifU domain protein [Natrialba magadii ATCC 43099]
gi|289531722|gb|ADD06073.1| nitrogen-fixing NifU domain protein [Natrialba magadii ATCC 43099]
Length = 131
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLK 169
ESD+++ +R++ L R P + GG + G V + + G C GC + T
Sbjct: 15 ESDTSLRERVESWL-TREMPIIQMHGGTSAVREADPETGEVIIELGGGCKGCSVSDVTTG 73
Query: 170 YGVANILNHFVPEVKDI 186
+ L + PE+ ++
Sbjct: 74 N-IKAELIQW-PEIDEV 88
>gi|284166326|ref|YP_003404605.1| nitrogen-fixing NifU domain protein [Haloterrigena turkmenica DSM
5511]
gi|284015981|gb|ADB61932.1| nitrogen-fixing NifU domain protein [Haloterrigena turkmenica DSM
5511]
Length = 129
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Query: 104 DMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGC 161
D S + + ++ +R++ L + P + GG + G V + + G C GC
Sbjct: 5 DAVSDAEDDGEPSLRERVETWLSREM-PIIQMHGGTSAVREVNSETGEVIIELGGGCKGC 63
Query: 162 PSASETLKYGVANILNHFVPEVKDI 186
+ T + L + PE+ ++
Sbjct: 64 SVSDVTTGN-IEAELIKW-PEIDEV 86
>gi|75765061|ref|ZP_00744362.1| PBS lyase HEAT-like repeat [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74487453|gb|EAO51368.1| PBS lyase HEAT-like repeat [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 169
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L P V +
Sbjct: 60 DFLAVERNAKYDWKVLLPQVRAV 82
>gi|321311654|ref|YP_004203941.1| putative lyase [Bacillus subtilis BSn5]
gi|320017928|gb|ADV92914.1| putative lyase [Bacillus subtilis BSn5]
Length = 377
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 1 MFIQ-TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEIS-PLASRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + L G + ++AE + P+ + I I G+ VY
Sbjct: 1 MKIKSIEPTPSPNTMKVILTEE-LPAGKSNNYKPEQAEGAPPVIADILKIDGVKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVL-GMIMEHFISGDP 90
DF+ V ++ YDW+ + P V ME S +
Sbjct: 60 DFLAVERNARYDWKDILPQVRTAFGMESAESAEE 93
>gi|222151329|ref|YP_002560485.1| hypothetical protein MCCL_1082 [Macrococcus caseolyticus JCSC5402]
gi|222120454|dbj|BAH17789.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 240
Score = 56.0 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 15/154 (9%)
Query: 4 QTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITV 63
+ E TP+P TLK + + + EA + + +I I +V+ DFI+V
Sbjct: 5 KIEPTPSPNTLKITLDFNKEDMKSTTYQSI-EASNPAFINELLNIKNIKAVFHALDFISV 63
Query: 64 GKD-QYDWEHLRPPVLGMIMEHFISGD-PIIHNGGLGDMKLDDMGSGDFIESDSAVV--- 118
K+ DW+ L P I + F SG +++ +GD+ + +F +
Sbjct: 64 DKNPSSDWDILLPE----IKQVFASGSIADVNHQPVGDLGEKQVEVLEFKNIPYQIKITY 119
Query: 119 --QRIKEVLDNRVRPAV---ARDGGDIVFKGYRD 147
+++ LD R A+ D I+ + + D
Sbjct: 120 RDSEVRKQLDLRFIDAMLDSQNDDNVILLRRWVD 153
>gi|169237452|ref|YP_001690656.1| hypothetical protein OE5162D1F [Halobacterium salinarum R1]
gi|167728679|emb|CAP15523.1| hypothetical protein OE5162D1F [Halobacterium salinarum R1]
Length = 118
Score = 55.6 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 131 PAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
P + + GG+ + + G +++ GACSGC A T+ + + L + ++ D+
Sbjct: 29 PQIQQHGGNFEIREIDEAAGTATVAIGGACSGCGIAPMTM-NAIESRLPESLDDLDDVTV 87
Query: 189 V 189
V
Sbjct: 88 V 88
>gi|282916696|ref|ZP_06324454.1| conserved virulence factor C [Staphylococcus aureus subsp. aureus
D139]
gi|283770500|ref|ZP_06343392.1| conserved virulence factor C [Staphylococcus aureus subsp. aureus
H19]
gi|282319183|gb|EFB49535.1| conserved virulence factor C [Staphylococcus aureus subsp. aureus
D139]
gi|283460647|gb|EFC07737.1| conserved virulence factor C [Staphylococcus aureus subsp. aureus
H19]
Length = 374
Score = 55.6 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + +E + +++ SI GI S++ +F+
Sbjct: 4 LRIEPTPSPNTMKVVLSFTREDKLSNTYKKVEETQ-PRFINQLLSIDGITSIFHVMNFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD 103
V K + DWE + P + + F G+ ++ + +
Sbjct: 63 VDKAPKADWEVILPDIKAV----FSDGNKVLESVNEAQIDNH 100
>gi|110668993|ref|YP_658804.1| NifU domain-containing protein [Haloquadratum walsbyi DSM 16790]
gi|109626740|emb|CAJ53207.1| nifU protein C-terminal domain homolog [Haloquadratum walsbyi DSM
16790]
Length = 140
Score = 55.6 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 82 MEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRV---RPAVARDGG 138
M +F +G P + G + + ESD + ++ ++N + P + GG
Sbjct: 1 MTYFSTGSP--NVGPTASFHIIALKKTVMSESDQTQTESLRHRIENWMVGQMPIIQMHGG 58
Query: 139 DIVFK--GYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
+ V + G V + + GAC+GC ++ T + + + L V+D+R
Sbjct: 59 ESVVRKADPETGEVVVELGGACAGCGISNLTAEN-IKSDLIMDFDRVEDVR 108
>gi|148508065|gb|ABQ75862.1| nifU C-terminal domain-like protein [uncultured haloarchaeon]
Length = 143
Score = 55.6 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGD--IVFKGYRDGIVFLSMRGACSGCP 162
+ D + +R+ L P + GG I G V + + GACSGC
Sbjct: 23 TETADAENETKELKERVTNFLRRNF-PQIQMHGGSAAIQHLDPEAGEVSIQLGGACSGCG 81
Query: 163 SASETLKYGVANILNHFVPEVKDIRT 188
+ T+ + + + + E++ +
Sbjct: 82 ISPMTI-QAIKSRMVKEISEIETVHA 106
>gi|212639454|ref|YP_002315974.1| HEAT repeats containing protein [Anoxybacillus flavithermus WK1]
gi|212560934|gb|ACJ33989.1| HEAT repeats containing protein [Anoxybacillus flavithermus WK1]
Length = 379
Score = 55.6 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISP-LASRIFSIPGIASVYFGY 58
M IQ E TP+P T+K + + L G + +AE +P + ++ I G+ +Y
Sbjct: 1 MKIQAIEPTPSPNTMKVLLDEE-LPFGTSYNYKPSQAEQAPEIIQQLLKIEGVKGIYHVA 59
Query: 59 DFITVGKDQ-YDWEHL---RPPVLGMIMEHFISGDPIIHN 94
DF+ V + YDW+ + V G +E + ++
Sbjct: 60 DFLAVERHAKYDWKPILTKVREVFGEQVEPLQENKAVRND 99
>gi|313682658|ref|YP_004060396.1| sel1 domain protein repeat-containing protein [Sulfuricurvum
kujiense DSM 16994]
gi|313155518|gb|ADR34196.1| Sel1 domain protein repeat-containing protein [Sulfuricurvum
kujiense DSM 16994]
Length = 296
Score = 55.2 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 45/117 (38%), Gaps = 9/117 (7%)
Query: 71 EHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVR 130
++ + S + D+ + +S+ +I+ V+ +
Sbjct: 177 NSMKWMIRAA--HAGESQAHSLLTYVSNQNDASDINVTFRMMDESSQRAKIESVITENLA 234
Query: 131 PAVARDGGDIVFKGYRDGI---VFLSMRGACSGC---PSASETL-KYGVANILNHFV 180
P +A DGG + Y G ++L GACSGC P+++ + NI++ +
Sbjct: 235 PILASDGGGVELVNYVGGDTPEIWLRYLGACSGCHLGPTSTAGMILEQFENIIDKKI 291
>gi|288556161|ref|YP_003428096.1| hypothetical protein BpOF4_15775 [Bacillus pseudofirmus OF4]
gi|288547321|gb|ADC51204.1| hypothetical protein BpOF4_15775 [Bacillus pseudofirmus OF4]
Length = 378
Score = 55.2 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFI-QTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISP-LASRIFSIPGIASVYFGY 58
M I E TP+P T+K + L +G+ + N K +P +F+I G+ SVY
Sbjct: 1 MHILSIEPTPSPNTMKLTLSES-LGQGSRNSYNEKNKGEAPEYIQELFNIEGVKSVYHVA 59
Query: 59 DFITVGK-DQYDWEHLRPPVLGM 80
DF+ + + + DW+ + P V +
Sbjct: 60 DFLAIDRHPKVDWKVILPKVREV 82
>gi|311068699|ref|YP_003973622.1| putative lyase [Bacillus atrophaeus 1942]
gi|310869216|gb|ADP32691.1| putative lyase [Bacillus atrophaeus 1942]
Length = 376
Score = 55.2 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 1 MFIQ-TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
M I+ E TP+P T+K I + + + ++ + P+ + I I G+ VY D
Sbjct: 1 MKIKSIEPTPSPNTMKVILTEELPAGKSNNYKPDQTEGAPPVVAEILKIEGVKGVYHVAD 60
Query: 60 FITVGKDQ-YDWEHLRPPVLGM 80
F+ V ++ YDW+ + P V
Sbjct: 61 FLAVERNARYDWKDILPQVRSA 82
>gi|162449342|ref|YP_001611709.1| NifU domain-containing protein [Sorangium cellulosum 'So ce 56']
gi|161159924|emb|CAN91229.1| nifU domain protein [Sorangium cellulosum 'So ce 56']
Length = 87
Score = 55.2 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILN 177
+ ++ +V + P V DGG++ + L + GACSGCP A T + + +
Sbjct: 5 IDQLLKVCREVIAPLVRADGGELYIVAVEPDHLTLHLAGACSGCPGAMLTARAVIEPAVL 64
Query: 178 HFVP 181
P
Sbjct: 65 AVAP 68
>gi|312438168|gb|ADQ77239.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH60]
Length = 374
Score = 55.2 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 65/161 (40%), Gaps = 21/161 (13%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + +E + +++ SI GI S++ +F+
Sbjct: 4 LRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEENQ-PRFINQLLSIDGITSIFHVMNFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGMI---MEHFISGDPIIHNGGLGDMKLDDMG------SGDFIE 112
V K + DWE + P + + SG + G++K + +
Sbjct: 63 VDKAPKADWEDILPDIKAAFSGESQVLESGKDPQIDNHFGEIKAELLTFKGIPYQIKLTS 122
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLS 153
+D + +++ + + + A + D IVF+
Sbjct: 123 ADQELREQLPQTYVDHMTQAQTKH----------DNIVFMR 153
>gi|196249225|ref|ZP_03147924.1| PBS lyase HEAT domain protein repeat-containing protein
[Geobacillus sp. G11MC16]
gi|196211454|gb|EDY06214.1| PBS lyase HEAT domain protein repeat-containing protein
[Geobacillus sp. G11MC16]
Length = 347
Score = 55.2 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEIS-PLASRIFSIPGIASVYFGY 58
M I+ E TP+P T+K + + L G H + PL + I G+ +Y
Sbjct: 1 MRIKAIEPTPSPNTMKILLDEE-LPSGMRHNYKPDNIGEAPPLIQTLMRINGVKGIYHVA 59
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDP 90
DF+ + + +YDW + V + E G
Sbjct: 60 DFLAIERHPKYDWRDILANVREVFGEEADDGAE 92
>gi|300712381|ref|YP_003738195.1| nitrogen-fixing NifU domain protein [Halalkalicoccus jeotgali B3]
gi|299126064|gb|ADJ16403.1| nitrogen-fixing NifU domain protein [Halalkalicoccus jeotgali B3]
Length = 115
Score = 55.2 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 104 DMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCP 162
D + E++ A+ +++ L ++ P + GG + G V + + G C GC
Sbjct: 4 DTDEPEVAETEEALRSKVETWLAKQM-PIIQMHGGTSAVRKADPGGEVIVELGGGCRGCE 62
Query: 163 SASETLKYGVANILNHFVPEVKD 185
+ T + L + PE+++
Sbjct: 63 ISDVTTGN-IEAELLQW-PEIEE 83
>gi|167391701|ref|XP_001739894.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165896233|gb|EDR23708.1| hypothetical protein EDI_167670 [Entamoeba dispar SAW760]
Length = 110
Score = 55.2 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETLKYGV 172
+ ++ +V + + P V +DGG++ +DG IV++ G C GC +A+ K +
Sbjct: 5 ISKLNQVFEQYIDPIVKKDGGNVEVYEVKDGVNGEIIVYIQYSGKCVGCAAANGATKEKI 64
Query: 173 ANILNH 178
IL
Sbjct: 65 QTILRD 70
>gi|242373741|ref|ZP_04819315.1| PBS lyase [Staphylococcus epidermidis M23864:W1]
gi|242348561|gb|EES40163.1| PBS lyase [Staphylococcus epidermidis M23864:W1]
Length = 370
Score = 55.2 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + + + + + G+ S+++ DF+
Sbjct: 4 VRVEPTPSPNTMKIVLSEKREDNQSNTY-TEVQNHQPQFINDLLQLEGVKSIFYVMDFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGMIME 83
+ K + DWE + P + +
Sbjct: 63 IDKQPKADWESVLPQITSTLNN 84
>gi|49483620|ref|YP_040844.1| hypothetical protein SAR1442 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257425493|ref|ZP_05601918.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428153|ref|ZP_05604551.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430784|ref|ZP_05607166.1| conserved virulence factor C [Staphylococcus aureus subsp. aureus
68-397]
gi|257433543|ref|ZP_05609901.1| PBS lyase HEAT domain-containing protein repeat-containing protein
[Staphylococcus aureus subsp. aureus E1410]
gi|257436384|ref|ZP_05612431.1| PBS lyase HEAT domain-containing protein repeat-containing protein
[Staphylococcus aureus subsp. aureus M876]
gi|282904011|ref|ZP_06311899.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
C160]
gi|282905776|ref|ZP_06313631.1| PBS lyase HEAT domain-containing protein repeat-containing protein
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282908746|ref|ZP_06316564.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911009|ref|ZP_06318811.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914219|ref|ZP_06322006.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M899]
gi|282919141|ref|ZP_06326876.1| conserved virulence factor [Staphylococcus aureus subsp. aureus
C427]
gi|282924324|ref|ZP_06331998.1| conserved virulence factor C [Staphylococcus aureus subsp. aureus
C101]
gi|283958194|ref|ZP_06375645.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293501245|ref|ZP_06667096.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
58-424]
gi|293510206|ref|ZP_06668914.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M809]
gi|293526800|ref|ZP_06671484.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M1015]
gi|295427940|ref|ZP_06820572.1| hypothetical protein SIAG_00464 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297591095|ref|ZP_06949733.1| PBS lyase HEAT family repeat protein [Staphylococcus aureus subsp.
aureus MN8]
gi|81651139|sp|Q6GGX8|CVFC_STAAR RecName: Full=Conserved virulence factor C
gi|49241749|emb|CAG40439.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257271950|gb|EEV04088.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257274994|gb|EEV06481.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278912|gb|EEV09531.1| conserved virulence factor C [Staphylococcus aureus subsp. aureus
68-397]
gi|257281636|gb|EEV11773.1| PBS lyase HEAT domain-containing protein repeat-containing protein
[Staphylococcus aureus subsp. aureus E1410]
gi|257284666|gb|EEV14786.1| PBS lyase HEAT domain-containing protein repeat-containing protein
[Staphylococcus aureus subsp. aureus M876]
gi|282313711|gb|EFB44104.1| conserved virulence factor C [Staphylococcus aureus subsp. aureus
C101]
gi|282316951|gb|EFB47325.1| conserved virulence factor [Staphylococcus aureus subsp. aureus
C427]
gi|282322287|gb|EFB52611.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M899]
gi|282324704|gb|EFB55014.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327010|gb|EFB57305.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331068|gb|EFB60582.1| PBS lyase HEAT domain-containing protein repeat-containing protein
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282595629|gb|EFC00593.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
C160]
gi|283790343|gb|EFC29160.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290920358|gb|EFD97422.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M1015]
gi|291096250|gb|EFE26511.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
58-424]
gi|291467150|gb|EFF09668.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M809]
gi|295128298|gb|EFG57932.1| hypothetical protein SIAG_00464 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297575981|gb|EFH94697.1| PBS lyase HEAT family repeat protein [Staphylococcus aureus subsp.
aureus MN8]
Length = 374
Score = 54.8 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 65/161 (40%), Gaps = 21/161 (13%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + +E + +++ SI GI S++ +F+
Sbjct: 4 LRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEENQ-PRFINQLLSIDGITSIFHVMNFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGMI---MEHFISGDPIIHNGGLGDMKLDDMG------SGDFIE 112
V K + DWE + P + + SG + G++K + +
Sbjct: 63 VDKAPKADWEDILPDIKAAFSGESQVLESGKDPQIDNHFGEIKAELLTFKGIPYQIKLTS 122
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLS 153
+D + +++ + + + A + D IVF+
Sbjct: 123 ADQELREQLPQTYVDHMTQAQTKH----------DNIVFMR 153
>gi|119029405|gb|ABL59928.1| NifU [uncultured bacterium]
Length = 311
Score = 54.8 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 32/73 (43%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ Q ++ ++ VRP + +GGDI + ++ + A SA +TLK V L
Sbjct: 239 LGQLVETAIEAVVRPLLQDEGGDIELVDIKGEKIYCRLTVAPGQSASADQTLKLLVEQQL 298
Query: 177 NHFVPEVKDIRTV 189
V + + V
Sbjct: 299 KEQVDDRLQVIAV 311
>gi|302868225|ref|YP_003836862.1| nitrogen-fixing NifU domain-containing protein [Micromonospora
aurantiaca ATCC 27029]
gi|302571084|gb|ADL47286.1| nitrogen-fixing NifU domain protein [Micromonospora aurantiaca ATCC
27029]
Length = 99
Score = 54.8 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVP 181
LD +VR V GG + DG ++ G C+ CPSA T+ V L
Sbjct: 11 DRALDGKVRQLVEAHGGGVTVDVDADGDARVTFHGRCAACPSAPVTMGSLVRPALLK--- 67
Query: 182 EVKDIRTV 189
++ +R+V
Sbjct: 68 -IEGVRSV 74
>gi|289581666|ref|YP_003480132.1| nitrogen-fixing NifU domain protein [Natrialba magadii ATCC 43099]
gi|289531219|gb|ADD05570.1| nitrogen-fixing NifU domain protein [Natrialba magadii ATCC 43099]
Length = 119
Score = 54.8 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGV 172
+ R+ L P + GG + G V +++ GACSGC + T+ +
Sbjct: 9 DDLEDRVANFLRRNF-PQIQMHGGSAAIQELDRESGEVTIALGGACSGCGISPMTI-QAI 66
Query: 173 ANILNHFVPEVKDI 186
+ + +PE++ +
Sbjct: 67 KSRMVKEIPEIEKV 80
>gi|298694723|gb|ADI97945.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ED133]
Length = 374
Score = 54.8 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + +E + +++ SI GI S++ +F+
Sbjct: 4 LRIEPTPSPNTMKVVLSFTREDKLSNTYKKVEETQ-PRFINQLLSIDGITSIFHVMNFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD 103
V K + DWE + P + + F G+ ++ + +
Sbjct: 63 VDKAPKADWEVILPDIKAV----FSDGNKVLESVNEPQIDNH 100
>gi|315195325|gb|EFU25712.1| hypothetical protein CGSSa00_06630 [Staphylococcus aureus subsp.
aureus CGS00]
Length = 374
Score = 54.8 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 65/161 (40%), Gaps = 21/161 (13%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + +E + +++ SI GI S++ +F+
Sbjct: 4 LRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEENQ-PRFINQLLSIDGITSIFHVMNFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGMI---MEHFISGDPIIHNGGLGDMKLDDMG------SGDFIE 112
V K + DWE + P + + SG + G++K + +
Sbjct: 63 VDKAPKADWEDILPDIKAAFSGESQVLESGKDPQIDNHFGEIKAELLTFKGIPYQIKLTS 122
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLS 153
+D + +++ + + + A + D IVF+
Sbjct: 123 ADQELREQLPQTYVDHMTQAQTKH----------DNIVFMR 153
>gi|296329494|ref|ZP_06871981.1| putative lyase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305674819|ref|YP_003866491.1| putative lyase [Bacillus subtilis subsp. spizizenii str. W23]
gi|296153376|gb|EFG94238.1| putative lyase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305413063|gb|ADM38182.1| putative lyase [Bacillus subtilis subsp. spizizenii str. W23]
Length = 377
Score = 54.8 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 1 MFIQ-TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEIS-PLASRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + L G + +AE + P+ + I I G+ VY
Sbjct: 1 MKIKSIEPTPSPNTMKVILTEE-LPAGKSNNYKPDQAEGAPPVIAEILKIEGVKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVL 78
DF+ V ++ YDW+ + P V
Sbjct: 60 DFLAVERNARYDWKDILPQVR 80
>gi|159466680|ref|XP_001691526.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
gi|158278872|gb|EDP04634.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
Length = 489
Score = 54.8 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 89 DPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG 148
+ + G L + SG S V+ + LD VRP + DGGD+ +G
Sbjct: 315 EATMDEGDLIKERQQAGSSGRSGRELS--VEAVTAALDE-VRPYLEADGGDVEVVEVENG 371
Query: 149 IVFLSMRGACSGCPSASETLKYGVANILNHFV-PEVKDIRT 188
+V+L ++GACS CPS S T+K G+ + + +V+DI
Sbjct: 372 VVYLRLQGACSSCPSQSATMKGGIERAIRNAFGDQVRDILQ 412
>gi|229017494|ref|ZP_04174395.1| hypothetical protein bcere0030_20470 [Bacillus cereus AH1273]
gi|229023708|ref|ZP_04180200.1| hypothetical protein bcere0029_20430 [Bacillus cereus AH1272]
gi|228737633|gb|EEL88137.1| hypothetical protein bcere0029_20430 [Bacillus cereus AH1272]
gi|228743818|gb|EEL93919.1| hypothetical protein bcere0030_20470 [Bacillus cereus AH1273]
Length = 375
Score = 54.8 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKL 102
DF+ V ++ YDW+ L V + G+ I+ +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV------FGEEIVEESAEQQLSH 98
>gi|67481077|ref|XP_655888.1| Fe-S cluster assembly protein NifU [Entamoeba histolytica
HM-1:IMSS]
gi|21654852|gb|AAK85709.1| iron-sulfur cluster NifU-like protein [Entamoeba histolytica]
gi|56473060|gb|EAL50508.1| Fe-S cluster assembly protein NifU, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 348
Score = 54.4 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETLKYGV 172
+ ++ +V + + P V +DGG + +DG IV++ G C GC +A+ K +
Sbjct: 246 ISKLNQVFEQYIDPIVKKDGGSVEVYEVKDGVNGEIIVYIQYSGKCVGCAAANGATKEKI 305
Query: 173 ANILNH 178
IL
Sbjct: 306 QTILRD 311
>gi|28188323|gb|AAL91100.1| NifU [Entamoeba histolytica]
Length = 348
Score = 54.4 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 118 VQRIKEVLDNRVRPAVARDGGDIVFKGYRDG-----IVFLSMRGACSGCPSASETLKYGV 172
+ ++ +V + + P V +DGG + +DG IV++ G C GC +A+ K +
Sbjct: 246 ISKLNQVFEQYIDPIVKKDGGSVEVYEVKDGVNGEIIVYIQYSGKCVGCAAANGATKEKI 305
Query: 173 ANILNH 178
IL
Sbjct: 306 QTILRD 311
>gi|295704071|ref|YP_003597146.1| PBS lyase HEAT-like repeat family protein [Bacillus megaterium
DSM 319]
gi|294801730|gb|ADF38796.1| PBS lyase HEAT-like repeat family protein [Bacillus megaterium
DSM 319]
Length = 374
Score = 54.4 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 1 MFIQ-TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISP-LASRIFSIPGIASVYFGY 58
M I+ E TP+P T+K + VL G + K AE +P + I + G+ VY
Sbjct: 1 MNIKSIEPTPSPNTMKINLDE-VLSGGKSNNYTEKNAEAAPEVVQDILKVEGVKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGMIMEHFISGDP 90
DF+ V ++ YDW+ + P V E
Sbjct: 60 DFLAVERNAKYDWKQILPQVRAAFGEDLQDNSE 92
>gi|239827011|ref|YP_002949635.1| PBS lyase HEAT domain protein repeat-containing protein
[Geobacillus sp. WCH70]
gi|239807304|gb|ACS24369.1| PBS lyase HEAT domain protein repeat-containing protein
[Geobacillus sp. WCH70]
Length = 377
Score = 54.4 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 9/105 (8%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEIS-PLASRIFSIPGIASVYFGYDFITV 63
E TP+P T+K + + L G H + + PL ++ I G+ +Y DF+ V
Sbjct: 7 IEPTPSPNTMKVLLDEE-LPFGTSHNYKPDNVDTAPPLIQQLMKIEGVKGIYHVADFLAV 65
Query: 64 GKD-QYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGS 107
++ +YDW+ + V + G+ + + G
Sbjct: 66 ERNPKYDWKEILTKVREV------FGEEVDSEQEETKKTNEHFGE 104
>gi|323438445|gb|EGA96199.1| hypothetical protein SAO11_2708 [Staphylococcus aureus O11]
Length = 374
Score = 54.4 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + +E + +++ SI GI S++ +F+
Sbjct: 4 LRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEETQ-PGFINQLLSIDGITSIFHVMNFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGM 80
V K + DWE + P +
Sbjct: 63 VDKAPKADWEVILPDIKAA 81
>gi|138895333|ref|YP_001125786.1| HEAT repeat-containing PBS lyase [Geobacillus thermodenitrificans
NG80-2]
gi|134266846|gb|ABO67041.1| PBS lyase HEAT-like repeat domain protein [Geobacillus
thermodenitrificans NG80-2]
Length = 383
Score = 54.0 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEIS-PLASRIFSIPGIASVYFGY 58
M I+ E TP+P T+K + + L G H + PL + I G+ +Y
Sbjct: 1 MRIKAIEPTPSPNTMKILLDEE-LPSGMRHNYKPDNIGEAPPLIQTLMRINGVKGIYHVA 59
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDP 90
DF+ + + +YDW + V + E G
Sbjct: 60 DFLAIERHPKYDWRDILANVREVFGEEADDGAE 92
>gi|110669335|ref|YP_659146.1| NifU domain-containing protein [Haloquadratum walsbyi DSM 16790]
gi|109627082|emb|CAJ53561.1| nifU protein C-terminal domain homolog [Haloquadratum walsbyi DSM
16790]
Length = 123
Score = 54.0 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGD--IVFKGYRDGIVFLSMRGACSGCP 162
+ D + +R+ L P + GG I G V + + GACSGC
Sbjct: 3 TETADAENETKELKERVTNFLRRNF-PQIQMHGGSAAIQHLDPEAGEVSIQLGGACSGCG 61
Query: 163 SASETLKYGVANILNHFVPEVKDIRT 188
+ T+ + + + + E++ +
Sbjct: 62 ISPMTI-QAIKSRMVKEISEIETVHA 86
>gi|218903310|ref|YP_002451144.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus AH820]
gi|218535371|gb|ACK87769.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus AH820]
Length = 375
Score = 54.0 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTKENTEQAPVQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|323444083|gb|EGB01694.1| hypothetical protein SAO46_0193 [Staphylococcus aureus O46]
Length = 374
Score = 54.0 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + +E + +++ SI GI S++ +F+
Sbjct: 4 LRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEETQ-PGFINQLLSIDGITSIFHVMNFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGM 80
V K + DWE + P +
Sbjct: 63 VDKAPKADWEVILPDIKAA 81
>gi|258422538|ref|ZP_05685446.1| HEAT repeat-containing PBS lyase [Staphylococcus aureus A9635]
gi|257847295|gb|EEV71301.1| HEAT repeat-containing PBS lyase [Staphylococcus aureus A9635]
Length = 374
Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 64/161 (39%), Gaps = 21/161 (13%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + +E + +++ SI GI S++ +F+
Sbjct: 4 LRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEENQ-PRFINQLLSIDGITSIFHVMNFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGMI---MEHFISGDPIIHNGGLGDMKLDDMG------SGDFIE 112
V K + DWE + P + + SG + G++K + +
Sbjct: 63 VDKAPKADWEVILPDIKAAFSGESQVLESGKDPQIDNHFGEIKAELLTFKGIPYQIKLTS 122
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLS 153
+D + +++ + + + A D IVF+
Sbjct: 123 ADQELREQLPQTYVDHMTQAQTEH----------DNIVFMR 153
>gi|242237955|ref|YP_002986136.1| Fe-S cluster assembly protein NifU [Dickeya dadantii Ech703]
gi|242130012|gb|ACS84314.1| Fe-S cluster assembly protein NifU [Dickeya dadantii Ech703]
Length = 277
Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLS 153
L + I Q + E + +RP + DGGD+ V +S
Sbjct: 184 AAILSEQASQPDAVAATIAVRDPQWQLVAEAVAE-LRPHIQADGGDMSLLNVSGHQVTVS 242
Query: 154 MRGACSGCPSASETL 168
+ G+CSGC TL
Sbjct: 243 LSGSCSGCMMTDMTL 257
>gi|229029909|ref|ZP_04185978.1| hypothetical protein bcere0028_19920 [Bacillus cereus AH1271]
gi|228731417|gb|EEL82330.1| hypothetical protein bcere0028_19920 [Bacillus cereus AH1271]
Length = 375
Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|228907934|ref|ZP_04071785.1| hypothetical protein bthur0013_20980 [Bacillus thuringiensis IBL
200]
gi|228851693|gb|EEM96496.1| hypothetical protein bthur0013_20980 [Bacillus thuringiensis IBL
200]
Length = 375
Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|254421536|ref|ZP_05035254.1| PBS lyase HEAT-like repeat domain protein [Synechococcus sp. PCC
7335]
gi|196189025|gb|EDX83989.1| PBS lyase HEAT-like repeat domain protein [Synechococcus sp. PCC
7335]
Length = 405
Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVG 64
E TP+P +K +V E + AE++ + + +I G+ SV+ DF+T+
Sbjct: 6 IETTPSPNCMKLTLDRVASNEPITLKTGDPTAEVAKVFQNLLAIEGVQSVFAMNDFVTLT 65
Query: 65 -KDQYDWEHL 73
K DW+ +
Sbjct: 66 RKGSADWQSV 75
>gi|228900795|ref|ZP_04065010.1| hypothetical protein bthur0014_19970 [Bacillus thuringiensis IBL
4222]
gi|228858721|gb|EEN03166.1| hypothetical protein bthur0014_19970 [Bacillus thuringiensis IBL
4222]
Length = 375
Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|228920917|ref|ZP_04084255.1| hypothetical protein bthur0011_19280 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228838706|gb|EEM84009.1| hypothetical protein bthur0011_19280 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|228939316|ref|ZP_04101908.1| hypothetical protein bthur0008_19760 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228972194|ref|ZP_04132809.1| hypothetical protein bthur0003_19700 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228978808|ref|ZP_04139178.1| hypothetical protein bthur0002_20100 [Bacillus thuringiensis
Bt407]
gi|228780910|gb|EEM29118.1| hypothetical protein bthur0002_20100 [Bacillus thuringiensis
Bt407]
gi|228787507|gb|EEM35471.1| hypothetical protein bthur0003_19700 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228820340|gb|EEM66373.1| hypothetical protein bthur0008_19760 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326939892|gb|AEA15788.1| HEAT repeat-containing PBS lyase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|300118122|ref|ZP_07055870.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus SJ1]
gi|298724433|gb|EFI65127.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus SJ1]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|15924419|ref|NP_371953.1| hypothetical protein SAV1429 [Staphylococcus aureus subsp. aureus
Mu50]
gi|81774912|sp|Q931R7|CVFC_STAAM RecName: Full=Conserved virulence factor C
gi|14247200|dbj|BAB57591.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus Mu50]
Length = 374
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + +E + +++ SI GI S++ +F+
Sbjct: 4 LRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEETQ-PRFINQLLSIDGITSIFHVMNFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGM 80
V K + DWE + P +
Sbjct: 63 VDKAPKADWEVILPDIKAA 81
>gi|327440655|dbj|BAK17020.1| FOG: HEAT repeat [Solibacillus silvestris StLB046]
Length = 373
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVG 64
E TP+P ++K I Q + + +++ E SP IF + G+ +Y +F+ +
Sbjct: 6 IEPTPSPNSMKVIIDQDLPFGKSFNYTKDNIGEASPEMQAIFGVEGVKGIYHVSNFLAIE 65
Query: 65 KDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLD 103
++ Y WE++ + I N G++ +
Sbjct: 66 RNAKYAWENILADIRRAIGGEATESTEYEMNEHYGEVNVH 105
>gi|269940924|emb|CBI49308.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus TW20]
Length = 374
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + +E + +++ SI GI S++ +F+
Sbjct: 4 LRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEETQ-PRFINQLLSIDGITSIFHVMNFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGM 80
V K + DWE + P +
Sbjct: 63 VDKAPKADWEVILPDIKAA 81
>gi|218233107|ref|YP_002366894.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus B4264]
gi|229150427|ref|ZP_04278643.1| hypothetical protein bcere0011_19780 [Bacillus cereus m1550]
gi|218161064|gb|ACK61056.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus B4264]
gi|228632920|gb|EEK89533.1| hypothetical protein bcere0011_19780 [Bacillus cereus m1550]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|196033826|ref|ZP_03101237.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus W]
gi|228945797|ref|ZP_04108143.1| hypothetical protein bthur0007_19530 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|195993506|gb|EDX57463.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus W]
gi|228813862|gb|EEM60137.1| hypothetical protein bthur0007_19530 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + + +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKKQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRSV 82
>gi|30262187|ref|NP_844564.1| HEAT repeat-containing PBS lyase [Bacillus anthracis str. Ames]
gi|49185028|ref|YP_028280.1| HEAT repeat-containing PBS lyase [Bacillus anthracis str. Sterne]
gi|49481614|ref|YP_036317.1| HEAT-like repeat-containing protein [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|50196932|ref|YP_018814.3| HEAT repeat-containing PBS lyase [Bacillus anthracis str. 'Ames
Ancestor']
gi|52143266|ref|YP_083562.1| HEAT-like repeat-containing protein [Bacillus cereus E33L]
gi|167632880|ref|ZP_02391206.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0442]
gi|170686452|ref|ZP_02877673.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0465]
gi|170708438|ref|ZP_02898881.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0389]
gi|177650796|ref|ZP_02933693.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0174]
gi|190567836|ref|ZP_03020747.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
Tsiankovskii-I]
gi|227815013|ref|YP_002815022.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. CDC 684]
gi|228914783|ref|ZP_04078392.1| hypothetical protein bthur0012_20130 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228933499|ref|ZP_04096352.1| hypothetical protein bthur0009_19650 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|229091168|ref|ZP_04222391.1| hypothetical protein bcere0021_19860 [Bacillus cereus Rock3-42]
gi|229604723|ref|YP_002866540.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0248]
gi|254684756|ref|ZP_05148616.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. CNEVA-9066]
gi|254721048|ref|ZP_05182839.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A1055]
gi|254737202|ref|ZP_05194906.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. Western North America USA6153]
gi|254743613|ref|ZP_05201298.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. Kruger B]
gi|254751517|ref|ZP_05203554.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. Vollum]
gi|254759032|ref|ZP_05211059.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. Australia 94]
gi|301053702|ref|YP_003791913.1| hypothetical protein BACI_c21220 [Bacillus anthracis CI]
gi|30256813|gb|AAP26050.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. Ames]
gi|49178955|gb|AAT54331.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. Sterne]
gi|49333170|gb|AAT63816.1| conserved hypothetical protein, HEAT-like repeat domain [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|50082994|gb|AAT31289.3| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. 'Ames Ancestor']
gi|51976735|gb|AAU18285.1| conserved hypothetical protein; HEAT-like repeat domain [Bacillus
cereus E33L]
gi|167531692|gb|EDR94357.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0442]
gi|170126677|gb|EDS95561.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0389]
gi|170669528|gb|EDT20270.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0465]
gi|172083257|gb|EDT68318.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0174]
gi|190560891|gb|EDV14865.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
Tsiankovskii-I]
gi|227007149|gb|ACP16892.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. CDC 684]
gi|228692299|gb|EEL46035.1| hypothetical protein bcere0021_19860 [Bacillus cereus Rock3-42]
gi|228826228|gb|EEM72008.1| hypothetical protein bthur0009_19650 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228845102|gb|EEM90144.1| hypothetical protein bthur0012_20130 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|229269131|gb|ACQ50768.1| PBS lyase HEAT-like repeat domain protein [Bacillus anthracis
str. A0248]
gi|300375871|gb|ADK04775.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
str. CI]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|218897171|ref|YP_002445582.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus G9842]
gi|218543423|gb|ACK95817.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus G9842]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|307721999|ref|YP_003893139.1| nitrogen-fixing NifU domain-containing protein [Sulfurimonas
autotrophica DSM 16294]
gi|306980092|gb|ADN10127.1| nitrogen-fixing NifU domain protein [Sulfurimonas autotrophica DSM
16294]
Length = 326
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 7/94 (7%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIKEV---LDNRVRPAVARDGGDIVFKGYRDGIV 150
+ D G + +VQ+IK V +D VR + DGG++ +
Sbjct: 224 DEEKMKAAADAQLEGAGNFEEMTLVQQIKAVDAVIDENVRQFLVMDGGNMEIIDIKKDDD 283
Query: 151 FL----SMRGACSGCPSASETLKYGVANILNHFV 180
++ GAC+GC S++ Y + + L +
Sbjct: 284 YIDIYIRYLGACNGCASSATGTLYAIESTLKEKL 317
>gi|258449243|ref|ZP_05697346.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|257857231|gb|EEV80129.1| conserved hypothetical protein [Staphylococcus aureus A6224]
Length = 374
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + +E + +++ SI GI S++ +F+
Sbjct: 4 LRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEETQ-PRFINQLLSIDGITSIFHVMNFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGM 80
V K + DWE + P +
Sbjct: 63 VDKAPKADWEVILPDIKAA 81
>gi|57650385|ref|YP_186313.1| hypothetical protein SACOL1465 [Staphylococcus aureus subsp.
aureus COL]
gi|88195161|ref|YP_499962.1| hypothetical protein SAOUHSC_01437 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221552|ref|YP_001332374.1| hypothetical protein NWMN_1340 [Staphylococcus aureus subsp.
aureus str. Newman]
gi|221142066|ref|ZP_03566559.1| hypothetical protein SauraJ_10595 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|258451088|ref|ZP_05699123.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|262050398|ref|ZP_06023238.1| hypothetical protein SAD30_2215 [Staphylococcus aureus D30]
gi|282927526|ref|ZP_06335143.1| conserved virulence factor C [Staphylococcus aureus A9765]
gi|284024429|ref|ZP_06378827.1| hypothetical protein Saura13_07545 [Staphylococcus aureus subsp.
aureus 132]
gi|304380992|ref|ZP_07363649.1| PBS lyase HEAT family repeat protein [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|81694503|sp|Q5HFZ4|CVFC_STAAC RecName: Full=Conserved virulence factor C
gi|123098039|sp|Q2FYK3|CVFC_STAA8 RecName: Full=Conserved virulence factor C
gi|57284571|gb|AAW36665.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus COL]
gi|87202719|gb|ABD30529.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150374352|dbj|BAF67612.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|257861143|gb|EEV83956.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|259161517|gb|EEW46119.1| hypothetical protein SAD30_2215 [Staphylococcus aureus D30]
gi|282592066|gb|EFB97092.1| conserved virulence factor C [Staphylococcus aureus A9765]
gi|302751259|gb|ADL65436.1| Fe-S cluster assembly protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304340468|gb|EFM06405.1| PBS lyase HEAT family repeat protein [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|329314106|gb|AEB88519.1| Conserved virulence factor C [Staphylococcus aureus subsp. aureus
T0131]
gi|329730566|gb|EGG66952.1| PBS lyase HEAT-like repeat protein [Staphylococcus aureus subsp.
aureus 21189]
Length = 374
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + +E + +++ SI GI S++ +F+
Sbjct: 4 LRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEETQ-PRFINQLLSIDGITSIFHVMNFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGM 80
V K + DWE + P +
Sbjct: 63 VDKAPKADWEVILPDIKAA 81
>gi|296271620|ref|YP_003654251.1| Sel1 domain-containing protein repeat-containing protein
[Arcobacter nitrofigilis DSM 7299]
gi|296095795|gb|ADG91745.1| Sel1 domain protein repeat-containing protein [Arcobacter
nitrofigilis DSM 7299]
Length = 323
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 104 DMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY-RDGIVFLSM--RGACSG 160
++ +S ++ I + LD +RP + +DGG+I+ Y + + L + +GAC G
Sbjct: 235 ELNEHFRAQSMEKQLEIINDTLDRFIRPILLKDGGNILLIDYVNEPEIELRLAYQGACVG 294
Query: 161 CPSASETLKYGVANILNHFV-PEVK 184
C AS + L + P V+
Sbjct: 295 CSIASTGTYEMIKGTLEKVIDPRVR 319
>gi|302333042|gb|ADL23235.1| Fe-S cluster assembly protein [Staphylococcus aureus subsp.
aureus JKD6159]
Length = 374
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + +E + +++ SI GI S++ +F+
Sbjct: 4 LRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEETQ-PEFINQLLSIDGITSIFHVMNFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGM 80
V K + DWE + P +
Sbjct: 63 VDKAPKADWEVILPDIKAA 81
>gi|228985281|ref|ZP_04145444.1| hypothetical protein bthur0001_19790 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228774436|gb|EEM22839.1| hypothetical protein bthur0001_19790 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRSV 82
>gi|228927253|ref|ZP_04090315.1| hypothetical protein bthur0010_19660 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|229121739|ref|ZP_04250961.1| hypothetical protein bcere0016_20390 [Bacillus cereus 95/8201]
gi|228661714|gb|EEL17332.1| hypothetical protein bcere0016_20390 [Bacillus cereus 95/8201]
gi|228832400|gb|EEM77975.1| hypothetical protein bthur0010_19660 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRSV 82
>gi|228955951|ref|ZP_04117887.1| hypothetical protein bthur0006_52700 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229069733|ref|ZP_04203018.1| hypothetical protein bcere0025_19360 [Bacillus cereus F65185]
gi|229079371|ref|ZP_04211913.1| hypothetical protein bcere0023_20260 [Bacillus cereus Rock4-2]
gi|229178571|ref|ZP_04305935.1| hypothetical protein bcere0005_19290 [Bacillus cereus 172560W]
gi|229190288|ref|ZP_04317289.1| hypothetical protein bcere0002_19560 [Bacillus cereus ATCC 10876]
gi|228593072|gb|EEK50890.1| hypothetical protein bcere0002_19560 [Bacillus cereus ATCC 10876]
gi|228604729|gb|EEK62186.1| hypothetical protein bcere0005_19290 [Bacillus cereus 172560W]
gi|228703904|gb|EEL56348.1| hypothetical protein bcere0023_20260 [Bacillus cereus Rock4-2]
gi|228713354|gb|EEL65244.1| hypothetical protein bcere0025_19360 [Bacillus cereus F65185]
gi|228803731|gb|EEM50414.1| hypothetical protein bthur0006_52700 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|206975315|ref|ZP_03236229.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
H3081.97]
gi|217959715|ref|YP_002338267.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus AH187]
gi|229138906|ref|ZP_04267485.1| hypothetical protein bcere0013_20190 [Bacillus cereus BDRD-ST26]
gi|206746736|gb|EDZ58129.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
H3081.97]
gi|217063358|gb|ACJ77608.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus AH187]
gi|228644531|gb|EEL00784.1| hypothetical protein bcere0013_20190 [Bacillus cereus BDRD-ST26]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|30020290|ref|NP_831921.1| HEAT repeat-containing PBS lyase [Bacillus cereus ATCC 14579]
gi|206972129|ref|ZP_03233077.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
AH1134]
gi|228958476|ref|ZP_04120196.1| hypothetical protein bthur0005_19820 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228965167|ref|ZP_04126261.1| hypothetical protein bthur0004_20040 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|229109644|ref|ZP_04239230.1| hypothetical protein bcere0018_19050 [Bacillus cereus Rock1-15]
gi|229127600|ref|ZP_04256589.1| hypothetical protein bcere0015_20490 [Bacillus cereus BDRD-Cer4]
gi|296502773|ref|YP_003664473.1| HEAT repeat-containing PBS lyase [Bacillus thuringiensis BMB171]
gi|29895840|gb|AAP09122.1| PBS lyase HEAT-like repeat [Bacillus cereus ATCC 14579]
gi|206733052|gb|EDZ50226.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
AH1134]
gi|228655677|gb|EEL11526.1| hypothetical protein bcere0015_20490 [Bacillus cereus BDRD-Cer4]
gi|228673685|gb|EEL28943.1| hypothetical protein bcere0018_19050 [Bacillus cereus Rock1-15]
gi|228794401|gb|EEM41913.1| hypothetical protein bthur0004_20040 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228801103|gb|EEM48000.1| hypothetical protein bthur0005_19820 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|296323825|gb|ADH06753.1| HEAT repeat-containing PBS lyase [Bacillus thuringiensis BMB171]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|229043940|ref|ZP_04191635.1| hypothetical protein bcere0027_19820 [Bacillus cereus AH676]
gi|228725397|gb|EEL76659.1| hypothetical protein bcere0027_19820 [Bacillus cereus AH676]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|229155773|ref|ZP_04283879.1| hypothetical protein bcere0010_19650 [Bacillus cereus ATCC 4342]
gi|228627759|gb|EEK84480.1| hypothetical protein bcere0010_19650 [Bacillus cereus ATCC 4342]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|320140325|gb|EFW32182.1| PBS lyase HEAT-like repeat protein [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320142674|gb|EFW34477.1| PBS lyase HEAT-like repeat protein [Staphylococcus aureus subsp.
aureus MRSA177]
Length = 374
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + +E + +++ SI GI S++ +F+
Sbjct: 4 LRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEETQ-PRFINQLLSIDGITSIFHVMNFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGM 80
V K + DWE + P +
Sbjct: 63 VDKAPKADWEVILPDIKAA 81
>gi|118477604|ref|YP_894755.1| HEAT repeat-containing protein [Bacillus thuringiensis str. Al
Hakam]
gi|196046077|ref|ZP_03113305.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
03BB108]
gi|225864155|ref|YP_002749533.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
03BB102]
gi|229184411|ref|ZP_04311618.1| hypothetical protein bcere0004_19740 [Bacillus cereus BGSC 6E1]
gi|118416829|gb|ABK85248.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
gi|196023132|gb|EDX61811.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
03BB108]
gi|225785671|gb|ACO25888.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
03BB102]
gi|228599207|gb|EEK56820.1| hypothetical protein bcere0004_19740 [Bacillus cereus BGSC 6E1]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|82751020|ref|YP_416761.1| hypothetical protein SAB1284c [Staphylococcus aureus RF122]
gi|123768558|sp|Q2YY38|CVFC_STAAB RecName: Full=Conserved virulence factor C
gi|82656551|emb|CAI80973.1| conserved hypothetical protein [Staphylococcus aureus RF122]
Length = 374
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + +E + +++ SI GI S++ +F+
Sbjct: 4 LRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEETQ-PEFINQLLSIDGITSIFHVMNFLA 62
Query: 63 VGKD-QYDWEHLRPPVLGM 80
V K + DWE + P +
Sbjct: 63 VDKSPKADWEVILPDIKAA 81
>gi|229196417|ref|ZP_04323164.1| hypothetical protein bcere0001_19760 [Bacillus cereus m1293]
gi|228587054|gb|EEK45125.1| hypothetical protein bcere0001_19760 [Bacillus cereus m1293]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|196039744|ref|ZP_03107048.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
NVH0597-99]
gi|196029447|gb|EDX68050.1| PBS lyase HEAT-like repeat domain protein [Bacillus cereus
NVH0597-99]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENIEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|324326222|gb|ADY21482.1| HEAT repeat-containing PBS lyase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|308173979|ref|YP_003920684.1| lyase [Bacillus amyloliquefaciens DSM 7]
gi|307606843|emb|CBI43214.1| putative lyase [Bacillus amyloliquefaciens DSM 7]
gi|328553095|gb|AEB23587.1| lyase [Bacillus amyloliquefaciens TA208]
gi|328912133|gb|AEB63729.1| putative lyase [Bacillus amyloliquefaciens LL3]
Length = 377
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 1 MFIQ-TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISP-LASRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + L G + + E +P + I +I G+ VY
Sbjct: 1 MKIKSIEPTPSPNTMKVILTEE-LPAGKSNNYKLDQTEGAPAVVRDILNIEGVKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ +DW+ + P V
Sbjct: 60 DFLAVERNARFDWKEILPQVRSA 82
>gi|15927010|ref|NP_374543.1| hypothetical protein SA1262 [Staphylococcus aureus subsp. aureus
N315]
gi|21283048|ref|NP_646136.1| hypothetical protein MW1319 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486270|ref|YP_043491.1| hypothetical protein SAS1372 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|148267916|ref|YP_001246859.1| HEAT repeat-containing PBS lyase [Staphylococcus aureus subsp.
aureus JH9]
gi|150393979|ref|YP_001316654.1| HEAT repeat-containing PBS lyase [Staphylococcus aureus subsp.
aureus JH1]
gi|156979748|ref|YP_001442007.1| hypothetical protein SAHV_1417 [Staphylococcus aureus subsp.
aureus Mu3]
gi|253315248|ref|ZP_04838461.1| hypothetical protein SauraC_03617 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253732068|ref|ZP_04866233.1| PBS lyase HEAT family repeat protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253733324|ref|ZP_04867489.1| PBS lyase HEAT family repeat protein [Staphylococcus aureus
subsp. aureus TCH130]
gi|255006218|ref|ZP_05144819.2| hypothetical protein SauraM_07105 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257795516|ref|ZP_05644495.1| conserved virulence factor C [Staphylococcus aureus A9781]
gi|258413325|ref|ZP_05681601.1| conserved virulence factor C [Staphylococcus aureus A9763]
gi|258420569|ref|ZP_05683511.1| conserved virulence factor C [Staphylococcus aureus A9719]
gi|258434660|ref|ZP_05688734.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258444764|ref|ZP_05693093.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258447402|ref|ZP_05695546.1| PBS lyase HEAT domain-containing protein repeat-containing
protein [Staphylococcus aureus A6300]
gi|258454621|ref|ZP_05702585.1| PBS lyase HEAT domain-containing protein repeat-containing
protein [Staphylococcus aureus A5937]
gi|269203051|ref|YP_003282320.1| hypothetical protein SAAV_1412 [Staphylococcus aureus subsp.
aureus ED98]
gi|282892923|ref|ZP_06301158.1| conserved virulence factor C [Staphylococcus aureus A8117]
gi|282927954|ref|ZP_06335563.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|295406373|ref|ZP_06816180.1| virulence factor C [Staphylococcus aureus A8819]
gi|296275289|ref|ZP_06857796.1| hypothetical protein SauraMR_03055 [Staphylococcus aureus subsp.
aureus MR1]
gi|297207913|ref|ZP_06924346.1| PBS lyase HEAT family repeat [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297244602|ref|ZP_06928485.1| virulence factor C [Staphylococcus aureus A8796]
gi|300911997|ref|ZP_07129440.1| PBS lyase HEAT family repeat protein [Staphylococcus aureus
subsp. aureus TCH70]
gi|81649314|sp|Q6G9D2|CVFC_STAAS RecName: Full=Conserved virulence factor C
gi|81704423|sp|Q7A0W1|CVFC_STAAW RecName: Full=Conserved virulence factor C
gi|81781603|sp|Q99U59|CVFC_STAAN RecName: Full=Conserved virulence factor C
gi|13701227|dbj|BAB42522.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus N315]
gi|21204487|dbj|BAB95184.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MW2]
gi|49244713|emb|CAG43148.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MSSA476]
gi|147740985|gb|ABQ49283.1| PBS lyase HEAT domain protein repeat-containing protein
[Staphylococcus aureus subsp. aureus JH9]
gi|149946431|gb|ABR52367.1| PBS lyase HEAT domain protein repeat-containing protein
[Staphylococcus aureus subsp. aureus JH1]
gi|156721883|dbj|BAF78300.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus Mu3]
gi|253724201|gb|EES92930.1| PBS lyase HEAT family repeat protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253728676|gb|EES97405.1| PBS lyase HEAT family repeat protein [Staphylococcus aureus
subsp. aureus TCH130]
gi|257789488|gb|EEV27828.1| conserved virulence factor C [Staphylococcus aureus A9781]
gi|257839889|gb|EEV64357.1| conserved virulence factor C [Staphylococcus aureus A9763]
gi|257843517|gb|EEV67924.1| conserved virulence factor C [Staphylococcus aureus A9719]
gi|257849021|gb|EEV73003.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257850257|gb|EEV74210.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257853593|gb|EEV76552.1| PBS lyase HEAT domain-containing protein repeat-containing
protein [Staphylococcus aureus A6300]
gi|257863004|gb|EEV85768.1| PBS lyase HEAT domain-containing protein repeat-containing
protein [Staphylococcus aureus A5937]
gi|262075341|gb|ACY11314.1| hypothetical protein SAAV_1412 [Staphylococcus aureus subsp.
aureus ED98]
gi|282590251|gb|EFB95331.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|282764920|gb|EFC05045.1| conserved virulence factor C [Staphylococcus aureus A8117]
gi|285817107|gb|ADC37594.1| PBS lyase HEAT-like repeat domain protein [Staphylococcus aureus
04-02981]
gi|294968961|gb|EFG44983.1| virulence factor C [Staphylococcus aureus A8819]
gi|296887487|gb|EFH26387.1| PBS lyase HEAT family repeat [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|297178632|gb|EFH37878.1| virulence factor C [Staphylococcus aureus A8796]
gi|300886243|gb|EFK81445.1| PBS lyase HEAT family repeat protein [Staphylococcus aureus
subsp. aureus TCH70]
gi|312829823|emb|CBX34665.1| PBS lyase HEAT-like repeat family protein [Staphylococcus aureus
subsp. aureus ECT-R 2]
gi|315129139|gb|EFT85134.1| hypothetical protein CGSSa03_06846 [Staphylococcus aureus subsp.
aureus CGS03]
gi|329727108|gb|EGG63564.1| PBS lyase HEAT-like repeat protein [Staphylococcus aureus subsp.
aureus 21172]
gi|329733412|gb|EGG69744.1| PBS lyase HEAT-like repeat protein [Staphylococcus aureus subsp.
aureus 21193]
Length = 374
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + +E + +++ SI GI S++ +F+
Sbjct: 4 LRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEETQ-PRFINQLLSIDGITSIFHVMNFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGM 80
V K + DWE + P +
Sbjct: 63 VDKAPKADWEVILPDIKAA 81
>gi|87161495|ref|YP_494019.1| hypothetical protein SAUSA300_1322 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|161509596|ref|YP_001575255.1| hypothetical protein USA300HOU_1366 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|294850753|ref|ZP_06791471.1| hypothetical protein SKAG_02851 [Staphylococcus aureus A9754]
gi|123735984|sp|Q2FH09|CVFC_STAA3 RecName: Full=Conserved virulence factor C
gi|87127469|gb|ABD21983.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|160368405|gb|ABX29376.1| hypothetical protein USA300HOU_1366 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|294822393|gb|EFG38844.1| hypothetical protein SKAG_02851 [Staphylococcus aureus A9754]
Length = 374
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + +E + +++ SI GI S++ +F+
Sbjct: 4 LRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEETQ-PRFINQLLSIDGITSIFHVMNFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGM 80
V K + DWE + P +
Sbjct: 63 VDKAPKADWEVILPDIKAA 81
>gi|229144799|ref|ZP_04273196.1| hypothetical protein bcere0012_19590 [Bacillus cereus BDRD-ST24]
gi|228638521|gb|EEK94954.1| hypothetical protein bcere0012_19590 [Bacillus cereus BDRD-ST24]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPIQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|228997277|ref|ZP_04156900.1| hypothetical protein bmyco0003_18590 [Bacillus mycoides Rock3-17]
gi|229004901|ref|ZP_04162629.1| hypothetical protein bmyco0002_18460 [Bacillus mycoides Rock1-4]
gi|228756345|gb|EEM05662.1| hypothetical protein bmyco0002_18460 [Bacillus mycoides Rock1-4]
gi|228762472|gb|EEM11396.1| hypothetical protein bmyco0003_18590 [Bacillus mycoides Rock3-17]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASR-IFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + AE +P + I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENAEQAPEQVQHILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|228991182|ref|ZP_04151141.1| hypothetical protein bpmyx0001_19410 [Bacillus pseudomycoides DSM
12442]
gi|228768595|gb|EEM17199.1| hypothetical protein bpmyx0001_19410 [Bacillus pseudomycoides DSM
12442]
Length = 375
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASR-IFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + AE +P + I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENAEQAPEQVQHILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|313682130|ref|YP_004059868.1| nitrogen-fixing nifu domain protein [Sulfuricurvum kujiense DSM
16994]
gi|313154990|gb|ADR33668.1| nitrogen-fixing NifU domain protein [Sulfuricurvum kujiense DSM
16994]
Length = 347
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 40/101 (39%), Gaps = 5/101 (4%)
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSGDFIE-SDSAVVQRIKEVLDNRVRPAVARDGGD 139
+++ + + + G G+F S ++ I+ +L+ +RP + D GD
Sbjct: 234 LVDMLSEITAELQKEAISKKIKEAKGDGNFNAMSLVQKLRSIESILEEYIRPTLKADHGD 293
Query: 140 IVFKGY----RDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ +++ +G C C + T G+ ++L
Sbjct: 294 VEVIDLKETEEGHELYIQYKGECMSCSMNTTTTLAGMQDML 334
>gi|57864874|gb|AAW57048.1| nitrogen fixation protein U [cyanobacterium endosymbiont of
Rhopalodia gibba]
Length = 110
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 8/70 (11%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I+++L V+PA A+DGGD+ ++++GACS S++ TL+ + + L +
Sbjct: 48 IQKILKEEVKPAPAQDGGDVDLFN------KVTLKGACSSFMSSAATLENAIKSRLRDCI 101
Query: 181 -PEVKDIRTV 189
PE+ + +V
Sbjct: 102 SPELI-VISV 110
>gi|239927180|ref|ZP_04684133.1| hypothetical protein SghaA1_03048 [Streptomyces ghanaensis ATCC
14672]
Length = 93
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 10/69 (14%)
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRG-AC-SGCPSASETLKYGVANILNHFV---- 180
R+RPA+ GGD G + + +R C SGC SAS G+ + V
Sbjct: 2 ERLRPALRERGGDAELTGVEGRVARVRLRTPGCGSGCGSAST----GIEEAVREAVLAVA 57
Query: 181 PEVKDIRTV 189
PE+ + V
Sbjct: 58 PELTAVEPV 66
>gi|29840661|ref|NP_829767.1| nifU protein, putative [Chlamydophila caviae GPIC]
gi|29835011|gb|AAP05645.1| nifU protein, putative [Chlamydophila caviae GPIC]
Length = 273
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 90 PIIHNGGLGDMKLDDMGSGDFIESDS--AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD 147
P+ + +++ + + + E+ S + +Q ++ ++++ P VA DGG ++ +
Sbjct: 156 PLKESFLPSEIEDANPYTKEAWEALSIESRLQVLRTTAEDKISPYVAMDGGSVLIENLEG 215
Query: 148 GIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IV ++ G CSGC SA + + +L +V
Sbjct: 216 NIVTIAYAGNCSGCFSAIGSTLNSIGQLLRAYV 248
>gi|329937296|ref|ZP_08286895.1| hypothetical protein SGM_2387 [Streptomyces griseoaurantiacus M045]
gi|329303577|gb|EGG47463.1| hypothetical protein SGM_2387 [Streptomyces griseoaurantiacus M045]
Length = 191
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
V +R + +D +R V GG+I G DG+ + + GC S + L+ V
Sbjct: 94 DPVERRAERAVDG-LRTVVRESGGEIELTGIDDGVARVRLD--VRGCGSTTAGLESAVRE 150
Query: 175 ILNHFVPEVKDIRTV 189
L PE+ + V
Sbjct: 151 ALLAAAPELSGVERV 165
>gi|89897915|ref|YP_515025.1| NifU-related protein [Chlamydophila felis Fe/C-56]
gi|89331287|dbj|BAE80880.1| NifU-related protein [Chlamydophila felis Fe/C-56]
Length = 273
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 90 PIIHNGGLGDMKLDDMGSGDFIE--SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD 147
P+ + +++ + + + E S + + ++ + + +V P A DGG + + +
Sbjct: 156 PLKESFLPSEIEDANPYTQEAWEALSLESRLHALRTIAEEKVSPYTALDGGSVFIESLEE 215
Query: 148 GIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IV +S G CSGC SA + + +L +V
Sbjct: 216 NIVTISYAGNCSGCFSAIGSTLNSIGQLLRAYV 248
>gi|311030407|ref|ZP_07708497.1| PBS lyase HEAT domain protein repeat-containing protein [Bacillus
sp. m3-13]
Length = 373
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 1 MFIQ-TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISP-LASRIFSIPGIASVYFGY 58
M IQ E TP+P T+K I + L G+ + ++ +P + I I G+ VY
Sbjct: 1 MNIQSIEPTPSPNTMKVILSEE-LPAGSRNNYTKDNSDQAPEIIQDILGIEGVKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ +DW+ + V
Sbjct: 60 DFLAVERNARFDWKVILSEVRAA 82
>gi|297584373|ref|YP_003700153.1| PBS lyase HEAT domain-containing protein repeat-containing protein
[Bacillus selenitireducens MLS10]
gi|297142830|gb|ADH99587.1| PBS lyase HEAT domain protein repeat-containing protein [Bacillus
selenitireducens MLS10]
Length = 375
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 19/138 (13%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+T E TP+P T+K I + L G + + E +P + I +I G+ VY
Sbjct: 1 MKIKTIEPTPSPNTMKVILNES-LPSGTANNYKSDEKNKAPEPITSILAIEGVTGVYHVA 59
Query: 59 DFITVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAV 117
DF+ + + + DW+ + V + D D+ E V
Sbjct: 60 DFLAIERHPKTDWKTILASVRMV---------------FGDDSDADEGNGHQIDEHFGEV 104
Query: 118 VQRIKEVLDNRVRPAVAR 135
+++E ++ +
Sbjct: 105 TVQVQEFKGIPMQVKIQS 122
>gi|172058305|ref|YP_001814765.1| hypothetical protein Exig_2297 [Exiguobacterium sibiricum 255-15]
gi|171990826|gb|ACB61748.1| conserved hypothetical protein [Exiguobacterium sibiricum 255-15]
Length = 79
Score = 53.3 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 4 QTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITV 63
Q + TPNP ++K + E + L + + +I GI +++ DF+TV
Sbjct: 2 QVDYTPNPNSVKITLDGDRFGAKSTSVKKGDTPEDA-LLASLITIDGIDNLFAYGDFVTV 60
Query: 64 GKD-QYDWEHLRPPVLG 79
K+ +W L P +
Sbjct: 61 TKEADAEWNVLLPTIEE 77
>gi|224373589|ref|YP_002607961.1| NifU family protein [Nautilia profundicola AmH]
gi|223589114|gb|ACM92850.1| NifU family protein [Nautilia profundicola AmH]
Length = 88
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI----VFLSMRGACSGCPSASETLKYG 171
++ I++V+ + P +A DGG R+ VF+ GAC+ C SA +
Sbjct: 10 EKIEAIEKVIAKDILPMLAFDGGMAEVLDVRESNGETHVFIRYGGACASCSSAGGATLFA 69
Query: 172 VANILNH 178
+ L
Sbjct: 70 IEETLRR 76
>gi|229085150|ref|ZP_04217397.1| hypothetical protein bcere0022_17700 [Bacillus cereus Rock3-44]
gi|228698131|gb|EEL50869.1| hypothetical protein bcere0022_17700 [Bacillus cereus Rock3-44]
Length = 375
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P +I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENTEQAPEQVQQILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|229172900|ref|ZP_04300454.1| hypothetical protein bcere0006_20080 [Bacillus cereus MM3]
gi|228610645|gb|EEK67913.1| hypothetical protein bcere0006_20080 [Bacillus cereus MM3]
Length = 375
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ +DW+ L V +
Sbjct: 60 DFLAVERNAKFDWKVLLQQVRSV 82
>gi|329943243|ref|ZP_08292017.1| nifU-like domain protein [Chlamydophila psittaci Cal10]
gi|332287822|ref|YP_004422723.1| putative NifU-related protein [Chlamydophila psittaci 6BC]
gi|313848394|emb|CBY17398.1| putative NifU-related protein [Chlamydophila psittaci RD1]
gi|325506999|gb|ADZ18637.1| putative NifU-related protein [Chlamydophila psittaci 6BC]
gi|328814790|gb|EGF84780.1| nifU-like domain protein [Chlamydophila psittaci Cal10]
gi|328915082|gb|AEB55915.1| NifU-like protein [Chlamydophila psittaci 6BC]
Length = 273
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 33/59 (55%)
Query: 122 KEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+ + ++++ P VA DGG ++ + + +V ++ G CSGC SA + + +L +V
Sbjct: 190 RTITEDKISPYVALDGGSVLIEKLEENVVTIAYAGNCSGCFSAIGSTLNSIGQLLRAYV 248
>gi|163939978|ref|YP_001644862.1| HEAT repeat-containing PBS lyase [Bacillus weihenstephanensis
KBAB4]
gi|163862175|gb|ABY43234.1| PBS lyase HEAT domain protein repeat-containing protein [Bacillus
weihenstephanensis KBAB4]
Length = 375
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPVQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|229133019|ref|ZP_04261860.1| hypothetical protein bcere0014_19450 [Bacillus cereus BDRD-ST196]
gi|228650437|gb|EEL06431.1| hypothetical protein bcere0014_19450 [Bacillus cereus BDRD-ST196]
Length = 375
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPVQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|319651240|ref|ZP_08005370.1| YpgR protein [Bacillus sp. 2_A_57_CT2]
gi|317397020|gb|EFV77728.1| YpgR protein [Bacillus sp. 2_A_57_CT2]
Length = 377
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 15/124 (12%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
M I+ E TP+P T+K I + + + A ++ K+ + I I GI VY D
Sbjct: 1 MRIKAIEPTPSPNTMKVILDEELPMGKANNYKKEKKEGAPKIILDILEIEGIKGVYHVAD 60
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+ V ++ YDW+ L P V G+ + + G D G + +V
Sbjct: 61 FLAVERNAKYDWKELLPQVRSA------FGEDVENEG-------TDNGIDEHFGEVQVLV 107
Query: 119 QRIK 122
Q K
Sbjct: 108 QMYK 111
>gi|251798976|ref|YP_003013707.1| PBS lyase HEAT domain protein repeat-containing protein
[Paenibacillus sp. JDR-2]
gi|247546602|gb|ACT03621.1| PBS lyase HEAT domain protein repeat-containing protein
[Paenibacillus sp. JDR-2]
Length = 382
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGYDF 60
I E TP+P ++K + L G KE E +P + +I G+ S++ DF
Sbjct: 3 LISIEPTPSPNSMK-LNVDESLPRGIRQSYTKKEIESAPEPLKALLAIEGVRSIFRTADF 61
Query: 61 ITVGK-DQYDWEHLRPPVLGMIM 82
I + + DW + ++
Sbjct: 62 IALDRVASADWARILADARTLLQ 84
>gi|229161174|ref|ZP_04289161.1| hypothetical protein bcere0009_19630 [Bacillus cereus R309803]
gi|228622270|gb|EEK79109.1| hypothetical protein bcere0009_19630 [Bacillus cereus R309803]
Length = 375
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ +DW+ L V +
Sbjct: 60 DFLAVERNAKFDWKVLLQQVRAV 82
>gi|229011478|ref|ZP_04168666.1| hypothetical protein bmyco0001_19280 [Bacillus mycoides DSM 2048]
gi|229167043|ref|ZP_04294787.1| hypothetical protein bcere0007_20090 [Bacillus cereus AH621]
gi|228616396|gb|EEK73477.1| hypothetical protein bcere0007_20090 [Bacillus cereus AH621]
gi|228749769|gb|EEL99606.1| hypothetical protein bmyco0001_19280 [Bacillus mycoides DSM 2048]
Length = 375
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPVQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|229059873|ref|ZP_04197248.1| hypothetical protein bcere0026_19810 [Bacillus cereus AH603]
gi|228719418|gb|EEL71021.1| hypothetical protein bcere0026_19810 [Bacillus cereus AH603]
Length = 375
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPVQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|229074890|ref|ZP_04207899.1| hypothetical protein bcere0024_19250 [Bacillus cereus Rock4-18]
gi|229096707|ref|ZP_04227678.1| hypothetical protein bcere0020_19540 [Bacillus cereus Rock3-29]
gi|229115684|ref|ZP_04245089.1| hypothetical protein bcere0017_19770 [Bacillus cereus Rock1-3]
gi|228667826|gb|EEL23263.1| hypothetical protein bcere0017_19770 [Bacillus cereus Rock1-3]
gi|228686913|gb|EEL40820.1| hypothetical protein bcere0020_19540 [Bacillus cereus Rock3-29]
gi|228708227|gb|EEL60391.1| hypothetical protein bcere0024_19250 [Bacillus cereus Rock4-18]
Length = 375
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPVQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|62185476|ref|YP_220261.1| putative NifU-related protein [Chlamydophila abortus S26/3]
gi|62148543|emb|CAH64314.1| putative NifU-related protein [Chlamydophila abortus S26/3]
Length = 273
Score = 52.5 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 90 PIIHNGGLGDMKLDDMGSGDFIESDS--AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD 147
P+ + +++ + + + E+ S + + ++ + ++++ P VA DGG ++ +
Sbjct: 156 PLKESFLPSEIEDANPYTQEAWEALSVESRLHALRTITEDKISPYVALDGGSVLIEKLEG 215
Query: 148 GIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
IV ++ G CSGC SA + + +L +V
Sbjct: 216 NIVTIAYAGNCSGCFSAIGSTLNSIGQLLRAYV 248
>gi|253577408|ref|ZP_04854724.1| HEAT repeat-containing PBS lyase [Paenibacillus sp. oral taxon
786 str. D14]
gi|251843208|gb|EES71240.1| HEAT repeat-containing PBS lyase [Paenibacillus sp. oral taxon
786 str. D14]
Length = 248
Score = 52.5 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 1 MFIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASR-IFSIPGIASVYFGYD 59
+FI E TP+P T+K + L G +P R + IPG+ SV+ D
Sbjct: 4 VFI--EPTPSPNTMKLHLDES-LEPGIRKTYTLNNERSAPAWIRGLLQIPGVKSVFHTAD 60
Query: 60 FITVG-KDQYDWEHLRPPV 77
F+ + K DW + V
Sbjct: 61 FVALDRKGNADWAAILSEV 79
>gi|329928571|ref|ZP_08282438.1| PBS lyase HEAT-like repeat protein [Paenibacillus sp. HGF5]
gi|328937687|gb|EGG34096.1| PBS lyase HEAT-like repeat protein [Paenibacillus sp. HGF5]
Length = 376
Score = 52.5 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 10/124 (8%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAK-EAEISPLASRIFSIPGIASVYFGYDF 60
FI E TP+P ++ + L G E P ++ IPG+ SV+ DF
Sbjct: 5 FI--EPTPSPNSMMLHLDET-LESGIRRTYTLDNERSAPPWIRQLLHIPGVKSVFHTLDF 61
Query: 61 ITVG-KDQYDWEHLRPPVLGMIMEHF-ISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
I + K DW P +LG + E F G G D+ + + +
Sbjct: 62 IALDRKGNADW----PSILGAVQEIFGQEGLAAGLKEGADDIAFGEAQVFVQYFRNIPMQ 117
Query: 119 QRIK 122
R+K
Sbjct: 118 IRVK 121
>gi|283470643|emb|CAQ49854.1| conserved virulence factor C [Staphylococcus aureus subsp. aureus
ST398]
Length = 374
Score = 52.5 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + +E + +++ SI GI S++ +F+
Sbjct: 4 LRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEENQ-PRFINQLLSIDGITSIFHVMNFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGM 80
V K + DWE + P + +
Sbjct: 63 VDKAPKADWEVILPDIKAV 81
>gi|322370156|ref|ZP_08044718.1| nitrogen-fixing NifU domain protein [Haladaptatus paucihalophilus
DX253]
gi|320550492|gb|EFW92144.1| nitrogen-fixing NifU domain protein [Haladaptatus paucihalophilus
DX253]
Length = 128
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 104 DMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFK--GYRDGIVFLSMRGACSGC 161
+ + D ES + R++ L ++ P + GG + G V + + GAC GC
Sbjct: 3 ENSTTDAAESADDLTSRVERWLTAQM-PIIQMHGGTSAVRKADPESGEVVIELGGACGGC 61
Query: 162 PSASETLKYGVANILNHFVPEVKDI 186
T + + L EV D+
Sbjct: 62 SITPITSQN-IEVELLKKFDEVDDV 85
>gi|297620543|ref|YP_003708680.1| putative nitrogen fixation related protein nifU [Waddlia
chondrophila WSU 86-1044]
gi|297375844|gb|ADI37674.1| putative nitrogen fixation related protein nifU [Waddlia
chondrophila WSU 86-1044]
Length = 258
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
I++VL++ +RP +A DGG + K ++ + ++ +G C+ C SA + + V
Sbjct: 187 IEQVLNDEIRPYIALDGGGVEVKELKENELVIAYQGNCTSCFSAVGATLSYIQQTVQARV 246
Query: 181 -PEVK 184
P+++
Sbjct: 247 HPDLR 251
>gi|261409346|ref|YP_003245587.1| HEAT domain-containing protein [Paenibacillus sp. Y412MC10]
gi|261285809|gb|ACX67780.1| HEAT domain containing protein [Paenibacillus sp. Y412MC10]
Length = 376
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 10/124 (8%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAK-EAEISPLASRIFSIPGIASVYFGYDF 60
FI E TP+P ++ + L G E P ++ IPG+ SV+ DF
Sbjct: 5 FI--EPTPSPNSMMLHLDET-LESGIRRTYTLDNERSAPPWIRQLLHIPGVKSVFHTLDF 61
Query: 61 ITVG-KDQYDWEHLRPPVLGMIMEHF-ISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
I + K DW P +LG + E F G G D+ + + +
Sbjct: 62 IALDRKGNADW----PSILGAVQEIFGQEGLAAGLKEGADDIAFGEAQVFVQYFRNIPMQ 117
Query: 119 QRIK 122
R+K
Sbjct: 118 IRVK 121
>gi|46445797|ref|YP_007162.1| putative iron-sulfur cluster assembly protein nifU [Candidatus
Protochlamydia amoebophila UWE25]
gi|46399438|emb|CAF22887.1| putative iron-sulfur cluster assembly protein nifU [Candidatus
Protochlamydia amoebophila UWE25]
Length = 263
Score = 52.1 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 118 VQRIKEVLDNRVRPAVARD-GGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+ I+EVLD VRP + D GG +V D + ++ +G+C+ C SA+ T + I+
Sbjct: 184 INLIEEVLDRDVRPYIELDAGGVVVLDLVNDWELHIAYQGSCTSCFSATGTTLSYIQQII 243
Query: 177 N 177
Sbjct: 244 R 244
>gi|73662618|ref|YP_301399.1| hypothetical protein SSP1309 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495133|dbj|BAE18454.1| hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 85
Score = 52.1 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
Query: 7 DTPNPATLKF---IPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITV 63
TPNP T+K + G+ + + I I GI S++ +FI+V
Sbjct: 8 QTPNPNTMKIVLQLSGEDYKPNTFTAVKD----NQPEFINDILQIEGIKSIFQAMNFISV 63
Query: 64 G-KDQYDWEHLRPPVLGMIME 83
K Y+WE L P V + E
Sbjct: 64 DKKADYEWETLLPEVTKTLKE 84
>gi|315195865|gb|EFU26233.1| hypothetical protein CGSSa01_11887 [Staphylococcus aureus subsp.
aureus CGS01]
Length = 145
Score = 52.1 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + + +E + +++ SI GI S++ +F+
Sbjct: 4 LRIEPTPSPNTMKVVLSYTREDKLSNTYKKVEETQ-PRFINQLLSIDGITSIFHVMNFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGM 80
V K + DWE + P +
Sbjct: 63 VDKAPKADWEVILPDIKAA 81
>gi|185535603|gb|ACC77868.1| nitrogen-fixing NifU-like protein [Staphylococcus xylosus]
Length = 85
Score = 52.1 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 3 IQTEDTPNPATLKF---IPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
++ TPNP T+K + G+ + + + I + GI S++ +
Sbjct: 4 VEVSQTPNPNTMKIVLQLSGEDYKPNTYTSVKD----DQPDFINAILELEGIKSIFQAMN 59
Query: 60 FITVGKD-QYDWEHLRPPVLGMIME 83
FI+V K+ +W+ L P V +
Sbjct: 60 FISVDKNSDSNWDDLLPRVTETLEH 84
>gi|310643989|ref|YP_003948747.1| pbs lyase heat domain protein repeat-containing protein
[Paenibacillus polymyxa SC2]
gi|309248939|gb|ADO58506.1| PBS lyase HEAT domain protein repeat-containing protein
[Paenibacillus polymyxa SC2]
Length = 400
Score = 51.7 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 1/108 (0%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVG 64
E TP+P T+ + + ++ E P R+ +I G+ SV+ DF+ +
Sbjct: 29 IEPTPSPNTMMLHLDERLEAGIRRTYTRDNERSAPPFIRRMLAIEGVKSVFHTTDFVALD 88
Query: 65 -KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI 111
K DW + V + E + + G+ + F
Sbjct: 89 RKGNADWSTILGQVRDQLGEEGADANWDLPEETSGEAFGEAQVFVQFF 136
>gi|89101041|ref|ZP_01173882.1| YpgR [Bacillus sp. NRRL B-14911]
gi|89084243|gb|EAR63403.1| YpgR [Bacillus sp. NRRL B-14911]
Length = 424
Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVG 64
E TP+P T+K I + + + + ++ K + I I GI VY DF+ V
Sbjct: 54 IEPTPSPNTMKIILDEELPMGKSNNYKKDKTDGAPKVVLDILQIEGIKGVYHVADFLAVE 113
Query: 65 KDQ-YDWEHLRPPVLGM 80
++ +DW+ L P V
Sbjct: 114 RNAKFDWKELLPQVRKA 130
>gi|313127505|ref|YP_004037775.1| thioredoxin-like protein [Halogeometricum borinquense DSM 11551]
gi|312293870|gb|ADQ68330.1| thioredoxin-like protein [Halogeometricum borinquense DSM 11551]
Length = 110
Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFK--GYRDGIVFLSMRGACSGCPSASET 167
+ ++ +RI++ + ++ P + GGD V + G V + + GAC+GC ++ T
Sbjct: 1 MSDDGDSLKRRIEDWMVGQM-PIIQMHGGDSVVRKADPETGEVVVELGGACAGCGISNIT 59
Query: 168 LKYGVANILNHFVPEVKDIR 187
+ L +V D++
Sbjct: 60 ANN-IKADLIMDFDDVTDVQ 78
>gi|229102807|ref|ZP_04233503.1| hypothetical protein bcere0019_19610 [Bacillus cereus Rock3-28]
gi|228680592|gb|EEL34773.1| hypothetical protein bcere0019_19610 [Bacillus cereus Rock3-28]
Length = 375
Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLSSGARNNYTNENKEQAPVQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|270627053|ref|ZP_06221965.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270317596|gb|EFA29038.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
Length = 50
Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 152 LSMRGACSGCPSASETLKYGVANILNHFVP-EVKDIRTV 189
L G C+GC TLK GV L P E+K + V
Sbjct: 1 LQFGGGCNGCSMVDVTLKDGVEKQLISLFPNELKGAKDV 39
>gi|295400371|ref|ZP_06810350.1| PBS lyase HEAT domain protein repeat-containing protein
[Geobacillus thermoglucosidasius C56-YS93]
gi|312111102|ref|YP_003989418.1| PBS lyase HEAT domain protein repeat-containing protein
[Geobacillus sp. Y4.1MC1]
gi|294977646|gb|EFG53245.1| PBS lyase HEAT domain protein repeat-containing protein
[Geobacillus thermoglucosidasius C56-YS93]
gi|311216203|gb|ADP74807.1| PBS lyase HEAT domain protein repeat-containing protein
[Geobacillus sp. Y4.1MC1]
Length = 378
Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEIS-PLASRIFSIPGIASVYFGYDFITV 63
E TP+P T+K + + L G H + + PL ++ I G+ +Y DF+ V
Sbjct: 7 IEPTPSPNTMKVLLDEE-LPFGTSHNYKRDNVDTAPPLIQQLMKIEGVKGIYHVADFLAV 65
Query: 64 GKD-QYDWEHL 73
++ +YDW+ +
Sbjct: 66 ERNPKYDWKEI 76
>gi|65319472|ref|ZP_00392431.1| COG1413: FOG: HEAT repeat [Bacillus anthracis str. A2012]
Length = 375
Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I+ TP+P T+K I + VL GA + + E +P+ I I GI VY
Sbjct: 1 MKIKAIXPTPSPNTMKVILNE-VLPSGARNNYTNENKEQAPMQVQEILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRAV 82
>gi|149179661|ref|ZP_01858166.1| YpgR [Bacillus sp. SG-1]
gi|148851853|gb|EDL65998.1| YpgR [Bacillus sp. SG-1]
Length = 374
Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 58/160 (36%), Gaps = 15/160 (9%)
Query: 1 MFIQ-TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYD 59
M I+ E TP+P T+K I + + + ++ I I GI VY D
Sbjct: 1 MRIKSIEPTPSPNTMKIILDEEMAGGKSNNYKKEDADTAPKRIKDILEIEGIKGVYHVAD 60
Query: 60 FITVGKDQ-YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVV 118
F+ V ++ +DW+ L P V G+ G + ++ +
Sbjct: 61 FLAVERNAKFDWQELLPRVRKA------FGEDAEVEGMATEADEHFGEVAVSVQEFKGIP 114
Query: 119 QRIKEVLDNRVRPAVARDG-----GDIVFKGYRDGIVFLS 153
++K ++ + D G+ +G D +V L
Sbjct: 115 MQVKLTTESEEKRFSLPDRFVKAVGEAQMEG--DNVVLLR 152
>gi|315649502|ref|ZP_07902587.1| HEAT domain containing protein [Paenibacillus vortex V453]
gi|315274975|gb|EFU38350.1| HEAT domain containing protein [Paenibacillus vortex V453]
Length = 376
Score = 50.9 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 8/123 (6%)
Query: 2 FIQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
FI E TP+P ++ + + ++ E P ++ IPG+ SV+ DFI
Sbjct: 5 FI--EPTPSPNSMMLHLDETLEAGIRRTYTVDNERSAPPWIKQLLHIPGVKSVFHTLDFI 62
Query: 62 TVG-KDQYDWEHLRPPVLGMIMEHF-ISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQ 119
+ K DW P +LG + E F G D + + +
Sbjct: 63 ALDRKGNADW----PSILGAVQEIFGQEGLAAGLKEADEDFAFGEAQVFVQYFRNIPMQI 118
Query: 120 RIK 122
R+K
Sbjct: 119 RVK 121
>gi|86740647|ref|YP_481047.1| nitrogen-fixing NifU-like protein [Frankia sp. CcI3]
gi|86567509|gb|ABD11318.1| nitrogen-fixing NifU-like [Frankia sp. CcI3]
Length = 191
Score = 50.9 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Query: 85 FISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG 144
+ SG P + GD +L D V R+ ++ ++RPAV GG+I G
Sbjct: 63 YASGAPEVLAAFTGD-ELLDHLLVLHDVHPEPVGARVARAIE-QLRPAVRDRGGEIELSG 120
Query: 145 YRDGIVFLSM-RGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
G+ + + G C SA T V + PE+ D+R
Sbjct: 121 IERGVAEVRLTLGGCGST-SAGVT--EAVRQAVLAVAPELSDVR 161
>gi|313125145|ref|YP_004035409.1| thioredoxin-like protein [Halogeometricum borinquense DSM 11551]
gi|312291510|gb|ADQ65970.1| thioredoxin-like protein [Halogeometricum borinquense DSM 11551]
Length = 108
Score = 50.6 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGV 172
++ +R + L N V P + GG + + G V +++ GACSGC A T+
Sbjct: 4 ESLERRTRNYLSNNV-PQIQEHGGHFEIEDVDNETGEVTVAIGGACSGCGIAPMTM---- 58
Query: 173 ANILNHFVP-EVKDIRTV 189
+ H +P EV DI V
Sbjct: 59 -RAIRHRLPDEVDDISKV 75
>gi|308070761|ref|YP_003872366.1| hypothetical protein PPE_04048 [Paenibacillus polymyxa E681]
gi|305860040|gb|ADM71828.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
Length = 377
Score = 50.6 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 1/108 (0%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVG 64
E TP+P T+ + + ++ E P R+ I G+ SV+ DF+ +
Sbjct: 6 IEPTPSPNTMMLHLDERLEAGIRRTYTRDNERSAPPFIRRMLGIEGVKSVFQTTDFVALD 65
Query: 65 -KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI 111
K DW + V + E + + G+ + F
Sbjct: 66 RKGNADWSTILGQVRDQLGEEGADANWDLPEETSGEAFGEAQVFVQFF 113
>gi|228475947|ref|ZP_04060655.1| conserved virulence factor C [Staphylococcus hominis SK119]
gi|228269770|gb|EEK11250.1| conserved virulence factor C [Staphylococcus hominis SK119]
Length = 371
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + ++ K ++ + + I + S++ DF+
Sbjct: 4 LKIEPTPSPNTMKIVLSEKRADNQSNTYTEVKTSQPD-FINDLLQIKDVKSIFHVIDFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGMIME 83
+ K + +WE + P + + +
Sbjct: 63 IDKYPKANWEEVLPQITASLQK 84
>gi|314936428|ref|ZP_07843775.1| conserved hypothetical protein [Staphylococcus hominis subsp.
hominis C80]
gi|313655047|gb|EFS18792.1| conserved hypothetical protein [Staphylococcus hominis subsp.
hominis C80]
Length = 371
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
++ E TP+P T+K + + + ++ K ++ + + I + S++ DF+
Sbjct: 4 LKIEPTPSPNTMKIVLSEKRADNQSNTYTEVKTSQPD-FINDLLQIKDVKSIFHVIDFLA 62
Query: 63 VGK-DQYDWEHLRPPVLGMIME 83
+ K + +WE + P + + +
Sbjct: 63 IDKYPKANWEEVLPQITASLQK 84
>gi|327398552|ref|YP_004339421.1| nitrogen-fixing NifU domain-containing protein [Hippea maritima DSM
10411]
gi|327181181|gb|AEA33362.1| nitrogen-fixing NifU domain protein [Hippea maritima DSM 10411]
Length = 322
Score = 50.6 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 44/104 (42%), Gaps = 9/104 (8%)
Query: 92 IHNGGLGDMKLDDMGSGDFIE-SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY----- 145
+++ + + + +F E + ++ I+ VL + +A DGG +
Sbjct: 219 VNDKMKEEELIKKAETSNFDEMTLLNKIKNIERVLREDISSILAMDGGSVELVDVREKEN 278
Query: 146 RDGIVFLSMRGACSGCPSASETLKYGVANILNHFV--PEVKDIR 187
+ V + G CS C +A+ T+ + LN + ++K ++
Sbjct: 279 EEVKVLIKYLGTCSVCNAAALTMHM-IEQTLNEKLETDKIKVVQ 321
>gi|292655497|ref|YP_003535394.1| nifU C-terminal domain-containing protein [Haloferax volcanii DS2]
gi|291370386|gb|ADE02613.1| nifU C-terminal domain protein [Haloferax volcanii DS2]
Length = 104
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 122 KEVLDNRVR---PAVARDGGD--IVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANIL 176
+E LD +R P + GGD I G V++S+ GACSGC + T + +
Sbjct: 11 EERLDLFMRRNFPQIEMHGGDAGIEAIDEETGEVWISLTGACSGCGISPMT----IQALK 66
Query: 177 NHFVPEVKDIRTV 189
V E ++I V
Sbjct: 67 ARMVAEFEEIDAV 79
>gi|15605453|ref|NP_220239.1| NifU-related protein [Chlamydia trachomatis D/UW-3/CX]
gi|76789460|ref|YP_328546.1| hypothetical protein CTA_0782 [Chlamydia trachomatis A/HAR-13]
gi|237803150|ref|YP_002888344.1| hypothetical protein JALI_7251 [Chlamydia trachomatis B/Jali20/OT]
gi|237805071|ref|YP_002889225.1| hypothetical protein CTB_7251 [Chlamydia trachomatis B/TZ1A828/OT]
gi|3329177|gb|AAC68315.1| NifU-related protein [Chlamydia trachomatis D/UW-3/CX]
gi|76167990|gb|AAX50998.1| NifU [Chlamydia trachomatis A/HAR-13]
gi|231273371|emb|CAX10286.1| conserved hypothetical protein [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274384|emb|CAX11179.1| conserved hypothetical protein [Chlamydia trachomatis B/Jali20/OT]
gi|296436265|gb|ADH18439.1| hypothetical protein G9768_03810 [Chlamydia trachomatis G/9768]
gi|296438125|gb|ADH20286.1| hypothetical protein G11074_03805 [Chlamydia trachomatis G/11074]
gi|297140626|gb|ADH97384.1| hypothetical protein CTG9301_03820 [Chlamydia trachomatis G/9301]
gi|297748851|gb|ADI51397.1| Nifu [Chlamydia trachomatis D-EC]
gi|297749731|gb|ADI52409.1| Nifu [Chlamydia trachomatis D-LC]
Length = 260
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Query: 85 FISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG 144
F D + ++ G+ E SA+ +KE ++ P VA D GD+
Sbjct: 154 FPFKDALSQLSEGNPYSTEEWGALSHDEQLSALNTMMKE----KITPLVAVDSGDVRIVH 209
Query: 145 YRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+ V ++ G CS C S+ + + + V
Sbjct: 210 FEGLTVTIAYSGNCSSCLSSVGSTLNSIGQLFRAHV 245
>gi|269128782|ref|YP_003302152.1| nitrogen-fixing NifU domain-containing protein [Thermomonospora
curvata DSM 43183]
gi|268313740|gb|ACZ00115.1| nitrogen-fixing NifU domain protein [Thermomonospora curvata DSM
43183]
Length = 206
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
V +RI L + +RP + GGD DG+ + + + GC S++ L+ V
Sbjct: 112 PVAERITRALAD-IRPHLRARGGDAELIAVSDGVARVRL--SARGCGSSAAQLRQAVEAA 168
Query: 176 LNHFVPEVKDIRTV 189
+ PE+ I V
Sbjct: 169 IGAAAPELSGIEQV 182
>gi|255349114|ref|ZP_05381121.1| hypothetical protein Ctra70_03875 [Chlamydia trachomatis 70]
gi|255503651|ref|ZP_05382041.1| hypothetical protein Ctra7_03870 [Chlamydia trachomatis 70s]
gi|255507330|ref|ZP_05382969.1| hypothetical protein CtraD_03855 [Chlamydia trachomatis D(s)2923]
gi|289525764|emb|CBJ15245.1| conserved hypothetical protein [Chlamydia trachomatis Sweden2]
gi|296435338|gb|ADH17516.1| hypothetical protein E150_03835 [Chlamydia trachomatis E/150]
gi|296439055|gb|ADH21208.1| hypothetical protein E11023_03800 [Chlamydia trachomatis E/11023]
Length = 260
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Query: 85 FISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG 144
F D + ++ G+ E SA+ +KE ++ P VA D GD+
Sbjct: 154 FPFKDALSQLSEGNPYSTEEWGALSHDEQLSALNTMMKE----KIAPLVAVDSGDVRIVH 209
Query: 145 YRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+ V ++ G CS C S+ + + + V
Sbjct: 210 FEGLTVTIAYSGNCSSCLSSVGSTLNSIGQLFRAHV 245
>gi|166154062|ref|YP_001654180.1| hypothetical protein CTL0089 [Chlamydia trachomatis 434/Bu]
gi|166154937|ref|YP_001653192.1| hypothetical protein CTLon_0089 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|255311550|ref|ZP_05354120.1| hypothetical protein Ctra62_03810 [Chlamydia trachomatis 6276]
gi|255317851|ref|ZP_05359097.1| hypothetical protein Ctra6_03805 [Chlamydia trachomatis 6276s]
gi|301335265|ref|ZP_07223509.1| hypothetical protein CtraL_00475 [Chlamydia trachomatis L2tet1]
gi|165930050|emb|CAP03533.1| conserved hypothetical protein [Chlamydia trachomatis 434/Bu]
gi|165930925|emb|CAP06487.1| conserved hypothetical protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|296437194|gb|ADH19364.1| hypothetical protein G11222_03830 [Chlamydia trachomatis G/11222]
Length = 260
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Query: 85 FISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG 144
F D + ++ G+ E SA+ +KE ++ P VA D GD+
Sbjct: 154 FPFKDALSQLSEGNPYSTEEWGALSHDEQLSALNTMMKE----KIAPLVAVDSGDVRIVH 209
Query: 145 YRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+ V ++ G CS C S+ + + + V
Sbjct: 210 FEGLTVTIAYSGNCSSCLSSVGSTLNSIGQLFRAHV 245
>gi|299115521|emb|CBN75725.1| PBS lyase HEAT domain protein repeat-containing protein [Ectocarpus
siliculosus]
Length = 452
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 19/104 (18%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNA----------------KEAEISPLASRIFSI 48
E TPNP++ KF Q + G+ + EA + L R+ I
Sbjct: 51 IESTPNPSSFKFDLDQTLYGPGSGATATRGITYSRAAAQQQQAGVPEAPEAIL--RLLEI 108
Query: 49 PGIASVYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPI 91
G+ SVY D++ + K W+ + P + + S DP+
Sbjct: 109 QGVESVYALADWLCLNKKPSAKWDAIVPAAVEALGGAASSLDPL 152
>gi|157692691|ref|YP_001487153.1| hypothetical protein BPUM_1923 [Bacillus pumilus SAFR-032]
gi|157681449|gb|ABV62593.1| hypothetical protein BPUM_1923 [Bacillus pumilus SAFR-032]
Length = 378
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVG 64
E TP+P T+K I + + + ++ ++ E + RI +I G+ VY DF+ V
Sbjct: 6 IEPTPSPNTMKVILTEALAGGKSNNYKKDQKEEAPEMIKRILNIEGVKGVYHVADFLAVE 65
Query: 65 KDQ-YDWEHLRPPVLGM 80
++ +DW+ + V
Sbjct: 66 RNAKFDWQGILQQVREA 82
>gi|152975403|ref|YP_001374920.1| HEAT repeat-containing PBS lyase [Bacillus cereus subsp.
cytotoxis NVH 391-98]
gi|152024155|gb|ABS21925.1| PBS lyase HEAT domain protein repeat-containing protein [Bacillus
cytotoxicus NVH 391-98]
Length = 375
Score = 49.8 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASR-IFSIPGIASVYFGY 58
M I+ E TP+P T+K I + VL GA + + + +P + I I GI VY
Sbjct: 1 MKIKAIEPTPSPNTMKVILNE-VLPAGARNNYTKENVDQAPEQVQHILKIEGIKGVYHVA 59
Query: 59 DFITVGKDQ-YDWEHLRPPVLGM 80
DF+ V ++ YDW+ L V +
Sbjct: 60 DFLAVERNAKYDWKVLLQQVRTV 82
>gi|205373116|ref|ZP_03225920.1| HEAT repeat-containing PBS lyase [Bacillus coahuilensis m4-4]
Length = 372
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGYDFITV 63
E TP+P T+K + L G + +++++P I +I GI VY DF+ V
Sbjct: 6 IEPTPSPNTMKVLLDHE-LPSGNRNNYTKDQSDVAPEEIQSILAIEGIKGVYHVSDFLAV 64
Query: 64 GKDQ-YDWEHLRPPVL 78
++ YDWE L V
Sbjct: 65 ERNAKYDWESLLIQVR 80
>gi|240146743|ref|ZP_04745344.1| thioredoxin-related protein [Roseburia intestinalis L1-82]
gi|257201098|gb|EEU99382.1| thioredoxin-related protein [Roseburia intestinalis L1-82]
gi|291535952|emb|CBL09064.1| NifU-like domain [Roseburia intestinalis M50/1]
gi|291538444|emb|CBL11555.1| NifU-like domain [Roseburia intestinalis XB6B4]
Length = 82
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCP 162
+ +R+K+ +D + P + DGG I G ++ + ++G CS C
Sbjct: 1 MDERLKKYVDEVIAPKLQGDGGFIDLTGTDGNVLHVRLQGECSKCA 46
>gi|23097960|ref|NP_691426.1| hypothetical protein OB0505 [Oceanobacillus iheyensis HTE831]
gi|22776184|dbj|BAC12461.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 378
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISP-LASRIFSIPGIASVYFGYDFI 61
+ E TP+P ++K + + E +++ + +P +F++ G+ ++Y DFI
Sbjct: 4 VSIEPTPSPHSMKINLSESLPPEETYNYNEKDDLTNAPNYVQELFALTGVKNIYRVVDFI 63
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMK 101
+ + + WE L P V ++ G I + + +
Sbjct: 64 ALARHPKTPWEELLPQVREVLGT--TEGLEIPNITPSTEQQ 102
>gi|229918483|ref|YP_002887129.1| PBS lyase HEAT domain protein repeat-containing protein
[Exiguobacterium sp. AT1b]
gi|229469912|gb|ACQ71684.1| PBS lyase HEAT domain protein repeat-containing protein
[Exiguobacterium sp. AT1b]
Length = 363
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 20/127 (15%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVG 64
E TP+P LK I G + + + + I + G+ SVY DF+ V
Sbjct: 6 IEPTPSPNNLKIIVDPPFEGRGTTY--DKASTDAPAIIQEIIGLRGVKSVYAVSDFLAVE 63
Query: 65 K-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKE 123
+ ++DW + + +++++ S V ++
Sbjct: 64 RHPKHDWHDVMNEIR-----------------RAFGEQVEEVESTKMDTDYEPVHVSVQF 106
Query: 124 VLDNRVR 130
VLD ++
Sbjct: 107 VLDVPMQ 113
>gi|194016950|ref|ZP_03055563.1| YpgR [Bacillus pumilus ATCC 7061]
gi|194011556|gb|EDW21125.1| YpgR [Bacillus pumilus ATCC 7061]
Length = 378
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 5 TEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVG 64
E TP+P T+K I + + + ++ ++ E + RI +I G+ VY DF+ V
Sbjct: 6 IEPTPSPNTMKVILTEALAGGKSNNYKKDQKDEAPEMIKRILNIEGVKGVYHVADFLAVE 65
Query: 65 KDQ-YDWEHLRPPVLGM 80
++ +DW+ + V
Sbjct: 66 RNAKFDWQGILQQVREA 82
>gi|289642381|ref|ZP_06474528.1| Rieske (2Fe-2S) domain protein [Frankia symbiont of Datisca
glomerata]
gi|289507813|gb|EFD28765.1| Rieske (2Fe-2S) domain protein [Frankia symbiont of Datisca
glomerata]
Length = 296
Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 23/60 (38%)
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+VRP + GGD FL + G C+ A TL+ V L V + +
Sbjct: 107 EKVRPYLRAHGGDAELVRVDGDTAFLRVSGTCNSRALAGVTLREVVKEALIGGVGSIARV 166
>gi|299536936|ref|ZP_07050243.1| hypothetical protein BFZC1_12978 [Lysinibacillus fusiformis ZC1]
gi|298727760|gb|EFI68328.1| hypothetical protein BFZC1_12978 [Lysinibacillus fusiformis ZC1]
Length = 375
Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E TP+P ++K + + + +F+ + E + A+ I +I G+ VY DF
Sbjct: 4 ITIEPTPSPNSMKIVVDTELPFGKSYNFTKDNKDEATGEAAAILAIEGVKGVYHVADFFA 63
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHFISGDPII 92
V ++ Y WE + + ++ E + + +
Sbjct: 64 VERNAKYAWEGILASIRQVLGEDVQTQEETV 94
>gi|330901168|gb|EGH32587.1| yhgI protein [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 71
Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Query: 134 ARDGGDIVFKGYRD----GIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
A GG + + I L G C GC A TLK G+ L +PE+ +R V
Sbjct: 1 ASHGGQVTLIDVVEEEAKNIAVLQFGGGCQGCGQADVTLKEGIERTLLERIPELSGVRDV 60
>gi|39934444|ref|NP_946720.1| nitrogen-fixing NifU C-terminal [Rhodopseudomonas palustris CGA009]
gi|39648293|emb|CAE26813.1| Nitrogen-fixing NifU, C-terminal [Rhodopseudomonas palustris
CGA009]
Length = 355
Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMG-SGDFIESDSAVVQ-RIKEVLDN--RVRPAVARD 136
I++ F+ G + ++D D + S V RIK + D +RP + D
Sbjct: 244 IVQRFVKGTVAVDELARSVRYVEDKYLRADVRSAISPVEATRIKIISDTIAALRPNIQAD 303
Query: 137 GGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
GGD+ + + + G C C +TL
Sbjct: 304 GGDLELISVNGNRIEVKLHGKCRACGLVGQTL 335
>gi|167463814|ref|ZP_02328903.1| Rhodopsin-like GPCR superfamily protein [Paenibacillus larvae
subsp. larvae BRL-230010]
Length = 378
Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 50/135 (37%), Gaps = 7/135 (5%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAI-HFSNAKEAEISPLASRIFSIPGIASVYFGYDFI 61
+ E TP+P ++K + L +G + F+ + R+ IP + SV+ DFI
Sbjct: 4 VSIEPTPSPNSMK-LNLDTALPKGKMYSFTREERNSAPGYIRRLLDIPDVKSVFQVTDFI 62
Query: 62 TVGK-DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQR 120
+ + + DW+ +L E F + + D ++ + + R
Sbjct: 63 ALDRTPKGDWK----QILAAAREVFGESGVSVEDAAAQDSGYGEVTVKLQVFRGIPIQVR 118
Query: 121 IKEVLDNRVRPAVAR 135
+ + + R
Sbjct: 119 VNNDAEEKRASMPQR 133
>gi|300120222|emb|CBK19776.2| unnamed protein product [Blastocystis hominis]
Length = 97
Score = 48.3 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 164 ASETLKYGVANILNHFVPEVKDI 186
+S TLK GV +L H++PEVK +
Sbjct: 19 SSITLKQGVEKMLMHYIPEVKRV 41
>gi|49483621|ref|YP_040845.1| hypothetical protein SAR1443 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|82751021|ref|YP_416762.1| hypothetical protein SAB1285c [Staphylococcus aureus RF122]
gi|257425494|ref|ZP_05601919.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257428154|ref|ZP_05604552.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257430785|ref|ZP_05607167.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 68-397]
gi|257433544|ref|ZP_05609902.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus E1410]
gi|257436385|ref|ZP_05612432.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus M876]
gi|258422537|ref|ZP_05685445.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|282904012|ref|ZP_06311900.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus C160]
gi|282905777|ref|ZP_06313632.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282908747|ref|ZP_06316565.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282911010|ref|ZP_06318812.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282914220|ref|ZP_06322007.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus M899]
gi|282916697|ref|ZP_06324455.1| hypothetical protein SATG_00190 [Staphylococcus aureus subsp.
aureus D139]
gi|282919142|ref|ZP_06326877.1| hypothetical protein SASG_00448 [Staphylococcus aureus subsp.
aureus C427]
gi|282924325|ref|ZP_06331999.1| hypothetical protein SARG_02019 [Staphylococcus aureus subsp.
aureus C101]
gi|283770501|ref|ZP_06343393.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus H19]
gi|283958195|ref|ZP_06375646.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293501246|ref|ZP_06667097.1| hypothetical protein SCAG_01776 [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510207|ref|ZP_06668915.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus M809]
gi|293526801|ref|ZP_06671485.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus M1015]
gi|295427941|ref|ZP_06820573.1| hypothetical protein SIAG_00465 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297591094|ref|ZP_06949732.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MN8]
gi|49241750|emb|CAG40440.1| hypothetical protein SAR1443 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|82656552|emb|CAI80974.1| conserved hypothetical protein [Staphylococcus aureus RF122]
gi|257271951|gb|EEV04089.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257274995|gb|EEV06482.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257278913|gb|EEV09532.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus 68-397]
gi|257281637|gb|EEV11774.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus E1410]
gi|257284667|gb|EEV14787.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus M876]
gi|257847294|gb|EEV71300.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|282313712|gb|EFB44105.1| hypothetical protein SARG_02019 [Staphylococcus aureus subsp.
aureus C101]
gi|282316952|gb|EFB47326.1| hypothetical protein SASG_00448 [Staphylococcus aureus subsp.
aureus C427]
gi|282319184|gb|EFB49536.1| hypothetical protein SATG_00190 [Staphylococcus aureus subsp.
aureus D139]
gi|282322288|gb|EFB52612.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus M899]
gi|282324705|gb|EFB55015.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282327011|gb|EFB57306.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282331069|gb|EFB60583.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282595630|gb|EFC00594.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus C160]
gi|283460648|gb|EFC07738.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus H19]
gi|283470644|emb|CAQ49855.1| conserved virulence factor C [Staphylococcus aureus subsp. aureus
ST398]
gi|283790344|gb|EFC29161.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus A017934/97]
gi|290920359|gb|EFD97423.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus M1015]
gi|291096251|gb|EFE26512.1| hypothetical protein SCAG_01776 [Staphylococcus aureus subsp.
aureus 58-424]
gi|291467151|gb|EFF09669.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus M809]
gi|295128299|gb|EFG57933.1| hypothetical protein SIAG_00465 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297575980|gb|EFH94696.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MN8]
gi|298694724|gb|ADI97946.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus ED133]
gi|302333043|gb|ADL23236.1| Scaffold protein Nfu/NifU N terminal [Staphylococcus aureus
subsp. aureus JKD6159]
gi|312438167|gb|ADQ77238.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus TCH60]
gi|315195326|gb|EFU25713.1| hypothetical protein CGSSa00_06635 [Staphylococcus aureus subsp.
aureus CGS00]
gi|323438446|gb|EGA96200.1| hypothetical protein SAO11_2709 [Staphylococcus aureus O11]
gi|323444084|gb|EGB01695.1| hypothetical protein SAO46_0194 [Staphylococcus aureus O46]
Length = 83
Score = 48.3 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I +TPN T+K + + ++ +++ + + I + G+ S++ DFI+
Sbjct: 4 ISISETPNHNTMKITLSESREGMTSDTYTKVDDSQPA-FINDILKVEGVKSIFHVMDFIS 62
Query: 63 VGKD-QYDWEHLRPPVLGM 80
V K+ +WE + P V +
Sbjct: 63 VDKENDANWETVLPKVEAV 81
>gi|15924420|ref|NP_371954.1| hypothetical protein SAV1430 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927011|ref|NP_374544.1| hypothetical protein SA1263 [Staphylococcus aureus subsp. aureus
N315]
gi|21283049|ref|NP_646137.1| hypothetical protein MW1320 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486271|ref|YP_043492.1| hypothetical protein SAS1373 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650386|ref|YP_186314.1| hypothetical protein SACOL1466 [Staphylococcus aureus subsp.
aureus COL]
gi|87162375|ref|YP_494020.1| hypothetical protein SAUSA300_1323 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88195162|ref|YP_499963.1| hypothetical protein SAOUHSC_01438 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148267917|ref|YP_001246860.1| hypothetical protein SaurJH9_1490 [Staphylococcus aureus subsp.
aureus JH9]
gi|150393980|ref|YP_001316655.1| hypothetical protein SaurJH1_1519 [Staphylococcus aureus subsp.
aureus JH1]
gi|151221553|ref|YP_001332375.1| hypothetical protein NWMN_1341 [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156979749|ref|YP_001442008.1| hypothetical protein SAHV_1418 [Staphylococcus aureus subsp.
aureus Mu3]
gi|161509597|ref|YP_001575256.1| hypothetical protein USA300HOU_1367 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221142065|ref|ZP_03566558.1| hypothetical protein SauraJ_10590 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253315247|ref|ZP_04838460.1| hypothetical protein SauraC_03612 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253732069|ref|ZP_04866234.1| Sav1430-like protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|255006219|ref|ZP_05144820.2| hypothetical protein SauraM_07110 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257795515|ref|ZP_05644494.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|258413324|ref|ZP_05681600.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258420570|ref|ZP_05683512.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|258434659|ref|ZP_05688733.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258444765|ref|ZP_05693094.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258447401|ref|ZP_05695545.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|258449242|ref|ZP_05697345.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|258451089|ref|ZP_05699124.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|258454620|ref|ZP_05702584.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|262050399|ref|ZP_06023239.1| hypothetical protein SAD30_2216 [Staphylococcus aureus D30]
gi|269203052|ref|YP_003282321.1| hypothetical protein SAAV_1413 [Staphylococcus aureus subsp.
aureus ED98]
gi|282892924|ref|ZP_06301159.1| hypothetical protein SGAG_00279 [Staphylococcus aureus A8117]
gi|282927527|ref|ZP_06335144.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|282927955|ref|ZP_06335564.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|284024430|ref|ZP_06378828.1| hypothetical protein Saura13_07550 [Staphylococcus aureus subsp.
aureus 132]
gi|294850754|ref|ZP_06791472.1| hypothetical protein SKAG_02852 [Staphylococcus aureus A9754]
gi|295406374|ref|ZP_06816181.1| hypothetical protein SMAG_01539 [Staphylococcus aureus A8819]
gi|296275290|ref|ZP_06857797.1| hypothetical protein SauraMR_03060 [Staphylococcus aureus subsp.
aureus MR1]
gi|297207912|ref|ZP_06924345.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297244603|ref|ZP_06928486.1| hypothetical protein SLAG_00688 [Staphylococcus aureus A8796]
gi|300911996|ref|ZP_07129439.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus TCH70]
gi|304380991|ref|ZP_07363648.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|13701228|dbj|BAB42523.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus N315]
gi|14247201|dbj|BAB57592.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus Mu50]
gi|21204488|dbj|BAB95185.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MW2]
gi|49244714|emb|CAG43149.1| hypothetical protein SAS1373 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57284572|gb|AAW36666.1| conserved domain protein [Staphylococcus aureus subsp. aureus
COL]
gi|87128349|gb|ABD22863.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87202720|gb|ABD30530.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|147740986|gb|ABQ49284.1| hypothetical protein SaurJH9_1490 [Staphylococcus aureus subsp.
aureus JH9]
gi|149946432|gb|ABR52368.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus JH1]
gi|150374353|dbj|BAF67613.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156721884|dbj|BAF78301.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus Mu3]
gi|160368406|gb|ABX29377.1| hypothetical protein USA300HOU_1367 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253724202|gb|EES92931.1| Sav1430-like protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|257789487|gb|EEV27827.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|257839888|gb|EEV64356.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257843518|gb|EEV67925.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|257849020|gb|EEV73002.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257850258|gb|EEV74211.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257853592|gb|EEV76551.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|257857230|gb|EEV80128.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|257861144|gb|EEV83957.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|257863003|gb|EEV85767.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|259161518|gb|EEW46120.1| hypothetical protein SAD30_2216 [Staphylococcus aureus D30]
gi|262075342|gb|ACY11315.1| hypothetical protein SAAV_1413 [Staphylococcus aureus subsp.
aureus ED98]
gi|269940925|emb|CBI49309.1| hypothetical protein SATW20_14310 [Staphylococcus aureus subsp.
aureus TW20]
gi|282590252|gb|EFB95332.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|282592067|gb|EFB97093.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|282764921|gb|EFC05046.1| hypothetical protein SGAG_00279 [Staphylococcus aureus A8117]
gi|285817108|gb|ADC37595.1| hypothetical protein SA2981_1384 [Staphylococcus aureus 04-02981]
gi|294822394|gb|EFG38845.1| hypothetical protein SKAG_02852 [Staphylococcus aureus A9754]
gi|294968962|gb|EFG44984.1| hypothetical protein SMAG_01539 [Staphylococcus aureus A8819]
gi|296887486|gb|EFH26386.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297178633|gb|EFH37879.1| hypothetical protein SLAG_00688 [Staphylococcus aureus A8796]
gi|300886242|gb|EFK81444.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus TCH70]
gi|304340467|gb|EFM06404.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|312829824|emb|CBX34666.1| chain A, X-Ray Crystal Structure Of Protein Sav1430 From
Staphylococcus aureus subsp. aureus ECT-R 2. Northeast
Structural Genomics Consortium Target Zr18
gi|315129140|gb|EFT85135.1| hypothetical protein CGSSa03_06851 [Staphylococcus aureus subsp.
aureus CGS03]
gi|315195866|gb|EFU26234.1| hypothetical protein CGSSa01_11892 [Staphylococcus aureus subsp.
aureus CGS01]
gi|320142675|gb|EFW34478.1| conserved domain protein [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329314107|gb|AEB88520.1| Conserved domain protein [Staphylococcus aureus subsp. aureus
T0131]
gi|329727149|gb|EGG63605.1| hypothetical protein SA21172_0285 [Staphylococcus aureus subsp.
aureus 21172]
gi|329730575|gb|EGG66961.1| hypothetical protein SA21189_0367 [Staphylococcus aureus subsp.
aureus 21189]
gi|329733409|gb|EGG69741.1| hypothetical protein SA21193_2490 [Staphylococcus aureus subsp.
aureus 21193]
Length = 83
Score = 48.3 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I +TPN T+K + + ++ +++ + + I + G+ S++ DFI+
Sbjct: 4 ISISETPNHNTMKITLSESREGMTSDTYTKVDDSQPA-FINDILKVEGVKSIFHVMDFIS 62
Query: 63 VGKD-QYDWEHLRPPVLGM 80
V K+ +WE + P V +
Sbjct: 63 VDKENDANWETVLPKVEAV 81
>gi|55669547|pdb|1PQX|A Chain A, Solution Nmr Structure Of Staphylococcus Aureus Protein
Sav1430. Northeast Strucutral Genomics Consortium
Target Zr18
Length = 91
Score = 48.3 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I +TPN T+K + + ++ +++ + + I + G+ S++ DFI+
Sbjct: 4 ISISETPNHNTMKITLSESREGMTSDTYTKVDDSQPA-FINDILKVEGVKSIFHVMDFIS 62
Query: 63 VGKD-QYDWEHLRPPVLGM 80
V K+ +WE + P V +
Sbjct: 63 VDKENDANWETVLPKVEAV 81
>gi|222478478|ref|YP_002564715.1| NifU domain-containing protein [Halorubrum lacusprofundi ATCC
49239]
gi|222451380|gb|ACM55645.1| NifU domain-containing protein [Halorubrum lacusprofundi ATCC
49239]
Length = 108
Score = 47.9 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFK--GYRDGIVFLSMRGACSGCPSASETLKY 170
SD ++ R+++ + ++ P + GG V + G V + + G CSGC ++ T
Sbjct: 2 SDESLADRVEKWMVGQM-PIIQMHGGTSVVREADAETGEVVVELGGTCSGCGISNITADN 60
Query: 171 GVANILNHFVPEVKDI 186
+ L EV+++
Sbjct: 61 -IRRDLIMDFDEVENV 75
>gi|323489360|ref|ZP_08094590.1| hypothetical protein GPDM_08410 [Planococcus donghaensis MPA1U2]
gi|323397001|gb|EGA89817.1| hypothetical protein GPDM_08410 [Planococcus donghaensis MPA1U2]
Length = 376
Score = 47.9 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 1 MFIQT-EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLA-SRIFSIPGIASVYFGY 58
M I T E TP+P T+K I Q L G H N E +P + +I G+ VY
Sbjct: 1 MKILTIEPTPSPNTMKVIIDQE-LPFGKSHNYNKDNIEAAPKEVQELLTIDGVKGVYHVA 59
Query: 59 DFITVGK-DQYDWEHL---RPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMG 106
DF+ V + ++DWE + V G EH +GD I + G++ +
Sbjct: 60 DFLAVERISKFDWEAILAQVRNVFGEDREH--TGDEIELDEHFGEVYVHVQE 109
>gi|169827750|ref|YP_001697908.1| hypothetical protein Bsph_2211 [Lysinibacillus sphaericus C3-41]
gi|168992238|gb|ACA39778.1| Hypothetical ypgR protein [Lysinibacillus sphaericus C3-41]
Length = 375
Score = 47.5 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E TP+P ++K + + + +F+ + E + A+ I +I GI VY DF
Sbjct: 4 ITIEPTPSPNSMKIVVDTELPFGKSYNFTKDNKDEATGEAAAILAIEGIKGVYHVADFFA 63
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHFIS-GDPIIHNGGLGD 99
V ++ Y WE + + ++ E + +P++ N G+
Sbjct: 64 VERNAKYAWEGILASIRQVLGEDVETQDEPMVANEFYGE 102
>gi|315925734|ref|ZP_07921942.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC
23263]
gi|315620977|gb|EFV00950.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC
23263]
Length = 99
Score = 47.5 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 30/72 (41%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
A+++++ D + ++ G + + + G C GC S S+T+ +
Sbjct: 4 EALLEKLDAFFDADINEYLSEHHGGAEVVDVEGDELIIRLTGKCRGCLSMSQTVDGIILK 63
Query: 175 ILNHFVPEVKDI 186
++ P +K +
Sbjct: 64 KVSAVFPFIKKV 75
>gi|68067185|ref|XP_675563.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56494821|emb|CAH97204.1| hypothetical protein PB104538.00.0 [Plasmodium berghei]
Length = 175
Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 76 PVLGMIMEH-FISGDPIIHNGGLGDMKLDDMGSGDFIESDS--AVVQRIKEVLDNRVRPA 132
+ I S + I + G + + + E++ ++ IK +++ RVRP
Sbjct: 66 EINNFIETFQKNSDNSISNEGNIIPILQKIKNETKYHENEDAMEIISSIKLLIEKRVRPI 125
Query: 133 VARDGGDIVFKGYR 146
V DGGDI F +
Sbjct: 126 VVNDGGDIKFVCFD 139
>gi|126653245|ref|ZP_01725363.1| hypothetical protein BB14905_04073 [Bacillus sp. B14905]
gi|126589996|gb|EAZ84124.1| hypothetical protein BB14905_04073 [Bacillus sp. B14905]
Length = 375
Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I E TP+P ++K + + + +F+ + E + A+ I +I GI VY DF
Sbjct: 4 ITIEPTPSPNSMKIVVDTELPFGKSYNFTKDNKDEATGEAAAILAIEGIKGVYHVADFFA 63
Query: 63 VGKDQ-YDWEHLRPPVLGMIMEHFISGDPII 92
V ++ Y WE + + ++ E + D I
Sbjct: 64 VERNAKYAWEGILASIRQVLGEDVETQDETI 94
>gi|297516950|ref|ZP_06935336.1| putative DNA uptake protein [Escherichia coli OP50]
Length = 121
Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 46/122 (37%), Gaps = 14/122 (11%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSI-PGIASVYFGYDFITVGKDQYDWEHLRPPVLG 79
+ HF+ + R+F I PG + G + + L+ +L
Sbjct: 3 RISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYCPPDAVEATDTALKFDLLT 62
Query: 80 MIMEHFISGDPIIHNGGLGDMKLDDMGSG----------DFIESDSAVVQRIKEVLDNRV 129
++ + P + + + D D +GS + D+ +++R++ +L +++
Sbjct: 63 AYVDELSA--PYLEDAEI-DFVTDQLGSQLTLKAPNAKMRKVADDAPLMERVEYMLQSQI 119
Query: 130 RP 131
P
Sbjct: 120 NP 121
>gi|298241650|ref|ZP_06965457.1| nitrogen-fixing NifU domain protein [Ktedonobacter racemifer DSM
44963]
gi|297554704|gb|EFH88568.1| nitrogen-fixing NifU domain protein [Ktedonobacter racemifer DSM
44963]
Length = 188
Score = 47.1 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 86 ISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY 145
+GD ++ ++ + D R+++ L +++ + GG +
Sbjct: 61 STGDALVERFAQDELLASLLLLHGLHPLDLET--RVRQAL-GKLQTTLGPRGGTLDLLKI 117
Query: 146 RDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
+L + G S CPS++ +L + ++ PE+++I
Sbjct: 118 EQARAYLILNGNHSSCPSSNASLTAKIEQAVHEVAPELEEI 158
>gi|170290577|ref|YP_001737393.1| metal-sulfur cluster biosynthetic protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174657|gb|ACB07710.1| Predicted metal-sulfur cluster biosynthetic enzyme [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 147
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 113 SDSAVVQRIKEVLDNRVRPAV---ARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
S + +I VL P + D G I DG V + M GCP + TL
Sbjct: 13 SSEEIKAKILGVLKFITDPEIPINIVDLGLIREMKVEDGKVNIKMVMTAPGCPYS-MTLL 71
Query: 170 YGVANILNHFVPEVKDIR 187
V + +PEV++++
Sbjct: 72 RIVEESIKQAIPEVEEVK 89
>gi|172058035|ref|YP_001814495.1| HEAT repeat-containing PBS lyase [Exiguobacterium sibiricum
255-15]
gi|171990556|gb|ACB61478.1| PBS lyase HEAT domain protein repeat-containing protein
[Exiguobacterium sibiricum 255-15]
Length = 363
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISP-LASRIFSIPGIASVYFGYDFI 61
I E TP+P +K I + +G + A +P +++ IPGI SVY DF+
Sbjct: 4 IAIEPTPSPNNMKVIVDETFSEKGQ----TFEHAFGAPDHVAKLLEIPGIKSVYQVSDFL 59
Query: 62 TVGK-DQYDWEHLRPPVL 78
V + +YDW L +
Sbjct: 60 AVERFPKYDWRTLVIEIR 77
>gi|320103903|ref|YP_004179494.1| nitrogen-fixing NifU domain-containing protein [Isosphaera pallida
ATCC 43644]
gi|319751185|gb|ADV62945.1| nitrogen-fixing NifU domain protein [Isosphaera pallida ATCC 43644]
Length = 100
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 149 IVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
+ + G C+ CP+ ++ + G+ ++ VP VK + V
Sbjct: 59 VAQVRFSGVCASCPATAQAILLGIEAVVRRRVPSVKFVEAV 99
>gi|85544714|pdb|2FFM|A Chain A, X-Ray Crystal Structure Of Protein Sav1430 From
Staphylococcus Aureus. Northeast Structural Genomics
Consortium Target Zr18
Length = 91
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 3 IQTEDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFIT 62
I +TPN T K + + ++ +++ + + I + G+ S++ DFI+
Sbjct: 4 ISISETPNHNTXKITLSESREGXTSDTYTKVDDSQPA-FINDILKVEGVKSIFHVXDFIS 62
Query: 63 VGKD-QYDWEHLRPPVLGM 80
V K+ +WE + P V +
Sbjct: 63 VDKENDANWETVLPKVEAV 81
>gi|289648714|ref|ZP_06480057.1| hypothetical protein Psyrpa2_13330 [Pseudomonas syringae pv.
aesculi str. 2250]
Length = 46
Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 164 ASETLKYGVANILNHFVPEVKDIRTV 189
A TLK G+ L +PE+ +R V
Sbjct: 10 ADVTLKEGIERTLLEHIPELSGVRDV 35
>gi|220932338|ref|YP_002509246.1| Thioredoxin-like protein [Halothermothrix orenii H 168]
gi|219993648|gb|ACL70251.1| Thioredoxin-like protein [Halothermothrix orenii H 168]
Length = 84
Score = 44.8 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGC 161
+ ++I+ ++ +RP + DGGDI ++GY++ V + C+ C
Sbjct: 2 ELEKKIEHYIEKSIRPRIRVDGGDIKYEGYKNETVIIGAYAGCATC 47
>gi|111221823|ref|YP_712617.1| hypothetical protein FRAAL2394 [Frankia alni ACN14a]
gi|111149355|emb|CAJ61043.1| hypothetical protein FRAAL2394 [Frankia alni ACN14a]
Length = 180
Score = 44.4 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 85 FISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG 144
+ +G P + D + + + V +R+ ++ R+RPAV GG+I G
Sbjct: 47 YAAGAPDVTAALTADELVGHLLVLHDVHP-EPVDRRVARAIE-RLRPAVRDRGGEIELVG 104
Query: 145 YRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
G+ +S+ GC SA+ + V + PE+ D+R
Sbjct: 105 IERGVAEISLT--LGGCGSAAGEVLAAVREAVLAVAPELSDVR 145
>gi|301336264|ref|ZP_07224466.1| NifU-related protein [Chlamydia muridarum MopnTet14]
Length = 260
Score = 44.4 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 4/92 (4%)
Query: 89 DPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDG 148
+ ++H ++ + + E S + +KE ++ P VA D G + +
Sbjct: 158 EALLHLHDCQPFSKEEWENLSYDEQLSTLNTMMKE----KIAPLVAMDDGSVRIVRFEGL 213
Query: 149 IVFLSMRGACSGCPSASETLKYGVANILNHFV 180
V ++ G CS C SA + + + V
Sbjct: 214 TVTIAYSGNCSSCLSAVGSTLNSIGQLFRAHV 245
>gi|307719916|ref|YP_003875448.1| hypothetical protein STHERM_c22530 [Spirochaeta thermophila DSM
6192]
gi|306533641|gb|ADN03175.1| hypothetical protein STHERM_c22530 [Spirochaeta thermophila DSM
6192]
Length = 27
Score = 44.4 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 163 SASETLKYGVANILNHFVPEVKDIRTV 189
+ TLK GV L +PE+ + V
Sbjct: 1 MSQITLKQGVEAYLKRKLPEISSVEAV 27
>gi|15791359|ref|NP_281183.1| hypothetical protein VNG2628H [Halobacterium sp. NRC-1]
gi|169237118|ref|YP_001690318.1| hypothetical protein OE4689R [Halobacterium salinarum R1]
gi|10582008|gb|AAG20663.1| hypothetical protein VNG_2628H [Halobacterium sp. NRC-1]
gi|167728184|emb|CAP14972.1| conserved hypothetical protein [Halobacterium salinarum R1]
Length = 123
Score = 44.4 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 116 AVVQRIKEVLDNRVRPAVARDGGDIVFKGYRD--GIVFLSMRGACSGCPSASETLKYGVA 173
+ +R++ L ++ P + GG + G V + + GACSGC + T +
Sbjct: 9 DLHERVETWLVGQM-PIIRSHGGTSAVRKADATAGEVVVELGGACSGCGISPRTA-QRIK 66
Query: 174 NILNHFVPEVKDI 186
L EV D+
Sbjct: 67 TDLAAEFDEVDDV 79
>gi|15834718|ref|NP_296477.1| NifU-related protein [Chlamydia muridarum Nigg]
gi|270284885|ref|ZP_06194279.1| NifU-related protein [Chlamydia muridarum Nigg]
gi|270288913|ref|ZP_06195215.1| NifU-related protein [Chlamydia muridarum Weiss]
gi|7190128|gb|AAF38973.1| NifU-related protein [Chlamydia muridarum Nigg]
Length = 260
Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 4/96 (4%)
Query: 85 FISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKG 144
F D ++ ++ + + E S + +KE ++ P VA D G +
Sbjct: 154 FPFKDALLQLNDGDPYSKEEWENLSYDEQLSTLNIMMKE----KIAPLVAMDEGSVRIVH 209
Query: 145 YRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+ V ++ G CS C SA + + + V
Sbjct: 210 FEGLTVTIAYSGNCSSCLSAVGSTLNSIGQLFRAHV 245
>gi|268317577|ref|YP_003291296.1| FeS assembly SUF system protein [Rhodothermus marinus DSM 4252]
gi|262335111|gb|ACY48908.1| FeS assembly SUF system protein [Rhodothermus marinus DSM 4252]
Length = 113
Score = 43.2 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Query: 114 DSAVVQRIKEVLDNRVRPAV---ARDGGDI-VFKGYRDGIVFLSMRGACSGCPSASETLK 169
D + Q I E L + P + D G I + + D V++ M GCP A TL
Sbjct: 13 DKELEQAIIEALKSVYDPEIPVNIYDLGLIYEIRIFEDRTVYVKMTLTAPGCPVAG-TLP 71
Query: 170 YGVANILNHFVPEVKDIR 187
V L VP VKD R
Sbjct: 72 GQVEMRLQE-VPGVKDAR 88
>gi|119719785|ref|YP_920280.1| hypothetical protein Tpen_0876 [Thermofilum pendens Hrk 5]
gi|119524905|gb|ABL78277.1| protein of unknown function DUF59 [Thermofilum pendens Hrk 5]
Length = 102
Score = 42.9 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Query: 119 QRIKEVLDNRVRPAV---ARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANI 175
+R+ E L P + D G + V + M GCP + L V ++
Sbjct: 8 ERVMEALKEVYDPEIPFNVVDLGLVYGVEVDGRKVKVKMTLTAIGCPMSYF-LVEMVRDV 66
Query: 176 LNHFVPEVKDIR 187
+ +PEV+D+
Sbjct: 67 IKEKIPEVEDVE 78
>gi|108804589|ref|YP_644526.1| hypothetical protein Rxyl_1755 [Rubrobacter xylanophilus DSM 9941]
gi|108765832|gb|ABG04714.1| protein of unknown function DUF59 [Rubrobacter xylanophilus DSM
9941]
Length = 101
Score = 42.9 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV-A 173
V ++EVLD P D G I G+ + + C GCP+ ++ +
Sbjct: 5 EEVRDALREVLDPEY-PISLVDLGLIRGVEVDGGVARIKLTYTCMGCPAMDM-IQDDIRE 62
Query: 174 NILNHFVPEVKDIRTV 189
+L E DI V
Sbjct: 63 RLLRMEGIEEVDIEVV 78
>gi|78100772|pdb|1TH5|A Chain A, Solution Structure Of C-Terminal Domain Of Nifu-Like
Protein From Oryza Sativa
Length = 74
Score = 42.5 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 119 QRIKEVLDNRVRPAVARDGGD-IVFKGYRDGIVFLSMRGACSGCPSASE-TLKYGVANIL 176
+ +++VL N +RP +A GG + F + IV + + G P+A T++ V+ L
Sbjct: 7 ENVEKVL-NEIRPYLAGTGGGGLQFLMIKGPIVKVRLTG-----PAAVVRTVRIAVSKKL 60
Query: 177 NHFVPEVKDIR 187
+P ++ ++
Sbjct: 61 REKIPSIQIVQ 71
>gi|454421|gb|AAA21836.1| nitrogen fixation protein [Nostoc commune]
Length = 205
Score = 41.7 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 77 VLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARD 136
+ + E+ P ++N G+ + + + S + ++ + I++VLD VRP + D
Sbjct: 102 IRSVQQEYAS---PALNNYGVK-VATEIVTSKERALTNVQKIALIQKVLDEEVRPVLIAD 157
Query: 137 GGDIVFKGYRDGIVFL 152
GGD+ + L
Sbjct: 158 GGDVELYDVEGDRLKL 173
>gi|224145825|ref|XP_002325778.1| predicted protein [Populus trichocarpa]
gi|222862653|gb|EEF00160.1| predicted protein [Populus trichocarpa]
Length = 55
Score = 40.5 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Query: 137 GGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDI 186
GG + + IV + + G +G T++ V L +P + +
Sbjct: 7 GGSLELVAIEEPIVKVRLTGPAAG----VMTVRVAVTQKLREKIPAIAAV 52
>gi|118358272|ref|XP_001012382.1| Papain family cysteine protease containing protein [Tetrahymena
thermophila]
gi|89294149|gb|EAR92137.1| Papain family cysteine protease containing protein [Tetrahymena
thermophila SB210]
Length = 325
Score = 40.5 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 51/135 (37%), Gaps = 24/135 (17%)
Query: 52 ASVYFGYDFI--------TVGK---DQYDWEHL-RPPVLGMIMEHFISGDPIIHNGGLGD 99
+ V F D I T K DQ D E + R V F DP + G
Sbjct: 28 SRVEFTEDQIKMWKSFKQTYNKKYADQDDDEEVYRMNVF-FDNLEFTKKDPTM-----GV 81
Query: 100 MKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVF-LSMRGAC 158
K D+ +F E + I E +D+ ++P + DIV G V + +G C
Sbjct: 82 TKFMDLTHTEFAELYLNPAENIDEEIDS-LQPI--QHNEDIVIDWVEKGAVTPVKNQGGC 138
Query: 159 SGCPSASETLKYGVA 173
GC S + T GV
Sbjct: 139 GGCWSFATT--GGVE 151
>gi|14590230|ref|NP_142296.1| hypothetical protein PH0311 [Pyrococcus horikoshii OT3]
gi|3256701|dbj|BAA29384.1| 176aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 176
Score = 40.5 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
++ +++++KEV+D V V G K D V++ M GCP L+
Sbjct: 79 TEDEILEKLKEVIDPEVGVDVVNLGLIYELKVNPDNTVYIKMTMTTPGCPLTLWILRAVE 138
Query: 173 ANILNHFVPEVKDIR 187
+L +P VKD+
Sbjct: 139 EKVL--EIPGVKDVE 151
>gi|260578747|ref|ZP_05846654.1| GMP synthase [Corynebacterium jeikeium ATCC 43734]
gi|258603045|gb|EEW16315.1| GMP synthase [Corynebacterium jeikeium ATCC 43734]
Length = 247
Score = 40.2 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 26/158 (16%), Positives = 51/158 (32%), Gaps = 33/158 (20%)
Query: 18 PGQVVLVEGAIHFSN-----AKEAEISPL---ASRIFSIPGIASVYFGYDFITVGKD-QY 68
G VL F + E E PL + + S G+ V+ G T+ +
Sbjct: 10 SGAEVLAAEYADFLSYSGLTPAELEQRPLDNPGADLGSFDGVEGVFIGGSPFTITRPVDV 69
Query: 69 DWEH-LRPPVLGMIME-------------HFISGDPIIHNGGLGDMKLDDMGSGDFIESD 114
+W+ + ++ I + S +G + + G+ + +D
Sbjct: 70 EWQEAISQKLVDFIQVESERQRFGIFSTCYGTSMLAHYLDGEVNSQYSESAGTSEVSLTD 129
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFL 152
+ V I L +R G++D +V +
Sbjct: 130 AGRVDPITAALPDRFT----------ALTGHKDSVVRV 157
>gi|326425084|ref|YP_004286307.1| hypothetical protein TPA2_gp66 [Tsukamurella phage TPA2]
gi|323145736|gb|ADX31980.1| hypothetical protein [Tsukamurella phage TPA2]
Length = 201
Score = 39.8 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 99 DMKLDDMGSGDFIESDSAVVQRIKE----VLDNRVRPAVARDGGDIVFKGYRDGIVFLSM 154
+ +LD E +A+V ++++ VLD R + + R+ D F G DG V +S
Sbjct: 119 NTELDQAYGTISREEYAALVTKVEQAKRMVLDERAQVSTLRE--DYEFSGASDGEVLVSY 176
Query: 155 RGACSGC 161
G C+GC
Sbjct: 177 HGCCTGC 183
>gi|241889459|ref|ZP_04776760.1| oligoendopeptidase F [Gemella haemolysans ATCC 10379]
gi|241864002|gb|EER68383.1| oligoendopeptidase F [Gemella haemolysans ATCC 10379]
Length = 600
Score = 39.0 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 3/87 (3%)
Query: 64 GKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA---VVQR 120
K +W L+P +L + E + + + KL+ + D+ +V
Sbjct: 101 SKFDAEWSFLKPELLSIEEEVLREYVEELEDLKVYKFKLEKLNKKRPHTLDAEQERIVAM 160
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRD 147
E LD A + D+ F+ D
Sbjct: 161 AAEALDASDETFSALNNADVKFEEVED 187
>gi|296158707|ref|ZP_06841536.1| nitrogen-fixing NifU domain protein [Burkholderia sp. Ch1-1]
gi|295890912|gb|EFG70701.1| nitrogen-fixing NifU domain protein [Burkholderia sp. Ch1-1]
Length = 112
Score = 39.0 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Query: 127 NRVRPAVARDGGDIVFKGYR-DGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKD 185
+ + + G + DG+V + G C+GC T V L V V D
Sbjct: 13 DALSKMIRAHAGGLELIDLSADGVVTVKYTGMCAGCQYRPVTTAGSVRPALL-AVAGVTD 71
Query: 186 I 186
+
Sbjct: 72 V 72
>gi|124028107|ref|YP_001013427.1| hypothetical protein Hbut_1250 [Hyperthermus butylicus DSM 5456]
gi|123978801|gb|ABM81082.1| universally conserved protein [Hyperthermus butylicus DSM 5456]
Length = 136
Score = 39.0 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
Query: 115 SAVVQRIKEVLDNRVRPAV---ARDGGDI-VFKGYRDGIVFLSMRGACSGCPSA--SETL 168
+ +++ + L N P + D G + K DG + + + GCP A TL
Sbjct: 12 EEIRKKVVDALRNVYDPEIPVNVYDLGLVYDLKVTEDGKIKVRLGVTAPGCPVAYQIVTL 71
Query: 169 KYGVANILNHFVPEVKDIR 187
+ VPE KD+
Sbjct: 72 A---EEAIRERVPEAKDVE 87
>gi|212224511|ref|YP_002307747.1| hypothetical protein TON_1360 [Thermococcus onnurineus NA1]
gi|212009468|gb|ACJ16850.1| hypothetical protein, conserved [Thermococcus onnurineus NA1]
Length = 176
Score = 39.0 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 50/142 (35%), Gaps = 16/142 (11%)
Query: 51 IASVYFGYD---FITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGS 107
+ + G D IT+ KD P + +++ I G + + D
Sbjct: 20 VKGLEIGEDGSVTITLSKD-------TPDIDNVLIRLNTELQKIEGIGTITINRERDKQV 72
Query: 108 GDFIESDSAVV-QRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
D E ++ +++KEV+D + V G D V++ M GCP
Sbjct: 73 DDNAEVTREMILEKLKEVIDPEIGVDVVNLGLIYELNIRPDKTVYVKMTMTTPGCP---- 128
Query: 167 TLKYGVANILNHFVPEVKDIRT 188
L + + + E+ ++
Sbjct: 129 -LTMWILRAVEDKILEIPGVKD 149
>gi|50084835|ref|YP_046345.1| putative metallo-beta lactamase [Acinetobacter sp. ADP1]
gi|49530811|emb|CAG68523.1| conserved hypothetical protein; putative metallo-beta lactamase
[Acinetobacter sp. ADP1]
Length = 292
Score = 39.0 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 28/74 (37%), Gaps = 12/74 (16%)
Query: 7 DTP--NPATLKFIPGQVVLVEGA----------IHFSNAKEAEISPLASRIFSIPGIASV 54
TP PA L ++ G V V F + + R++++P +
Sbjct: 144 PTPGHTPACLSYVVGDAVFVGDTLFMPDYGTARCDFPKGSASILFDSVQRLYNLPDTTRM 203
Query: 55 YFGYDFITVGKDQY 68
+ +D++ +D Y
Sbjct: 204 FLCHDYLPSTRDDY 217
>gi|289648715|ref|ZP_06480058.1| HesB/YadR/YfhF:nitrogen-fixing NifU, C-terminal [Pseudomonas
syringae pv. aesculi str. 2250]
Length = 150
Score = 38.6 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGY 145
+ +DS + +RI L + P +A GG +
Sbjct: 103 MVNADSPINERINYYLQTEINPGLASHGGQVTLIDV 138
>gi|145517009|ref|XP_001444393.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411804|emb|CAK76996.1| unnamed protein product [Paramecium tetraurelia]
Length = 4516
Score = 38.6 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 48/146 (32%), Gaps = 20/146 (13%)
Query: 11 PATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQYDW 70
TL+F GQ +L+E + S L +IF G+ SV G + I K
Sbjct: 3520 ENTLQF--GQPLLIENVYE--DIDSTIDSVLLKQIFKSAGVMSVRIGDNIIPYNK----- 3570
Query: 71 EHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKE----VLD 126
+ + M +S P + + + D + + + + +
Sbjct: 3571 ------LFNLFMTTKLSN-PHYTPEISTKVTIINFTITQSGLEDQLLEICVSKEQPNLEE 3623
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFL 152
+ R + + + D I+ +
Sbjct: 3624 EKNRQILQQHKNKQELQKIEDQILRV 3649
>gi|255546045|ref|XP_002514082.1| hypothetical protein RCOM_1046230 [Ricinus communis]
gi|223546538|gb|EEF48036.1| hypothetical protein RCOM_1046230 [Ricinus communis]
Length = 85
Score = 38.6 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 119 QRIKEVLDNRVRPAVARDGGDI-VFKGYRDGIVFLSMRGACSGCPSAS-ETLKYGVANIL 176
+ +++VL +RP +A GG + D +V + + P+A T++ + L
Sbjct: 18 ENVEKVLAE-IRPYLAGTGGGVLELVQIDDYVVKVRL-----SRPAAGVMTVRVALTQKL 71
Query: 177 NHFVPEVKDIRTV 189
+P + ++ +
Sbjct: 72 RDKIPAIAAVQLI 84
>gi|14521854|ref|NP_127330.1| dTDP-4-keto-l-rhamnose reductase related [Pyrococcus abyssi GE5]
gi|5459074|emb|CAB50560.1| Component of ring hydroxylating complex, putative [Pyrococcus
abyssi GE5]
Length = 176
Score = 38.6 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Query: 101 KLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSG 160
K + + ++ +++++KEV+D + V G K D V++ M G
Sbjct: 67 KREVKEEENVNLTEDMILEKLKEVIDPEIGIDVVNLGLIYELKVNPDNTVYIKMTMTTPG 126
Query: 161 CPSASETLKYGVANILNHFVPEVKDIR 187
CP L+ +L +P VKD+
Sbjct: 127 CPLTLWILRAVEEKVL--EIPGVKDVE 151
>gi|309804142|ref|ZP_07698220.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d]
gi|308163725|gb|EFO65994.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d]
Length = 104
Score = 38.2 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 115 SAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVAN 174
+V ++ +V+D + + G DGI + M GCP A K +
Sbjct: 9 DEIVAQLAKVIDPELNIDIVSLGLVYAIDLDEDGICLVQMMLTTMGCPLADVLAKMVIKQ 68
Query: 175 ILNHFVPEVKDI 186
+ +PE+K++
Sbjct: 69 L--KNIPEIKNV 78
>gi|145526018|ref|XP_001448820.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416386|emb|CAK81423.1| unnamed protein product [Paramecium tetraurelia]
Length = 1229
Score = 38.2 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 45/146 (30%), Gaps = 20/146 (13%)
Query: 11 PATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQYDW 70
TL+F GQ +L+E + S L +IF G+ SV G + I K
Sbjct: 253 ENTLQF--GQPLLIENIYE--DVDSTIDSVLLKQIFKNAGVMSVRIGDNIIPYNK----- 303
Query: 71 EHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKE----VLD 126
+ +P + + + D + + + + +
Sbjct: 304 -----QFNLFMTTKLS--NPHYTPEISTKVTIINFTITQSGLEDQLLEICVSKEQPNLEE 356
Query: 127 NRVRPAVARDGGDIVFKGYRDGIVFL 152
+ R + + + D I+ +
Sbjct: 357 EKNRQILQQHKNKQELQKIEDQILRV 382
>gi|16263138|ref|NP_435931.1| hypothetical protein SMa1255 [Sinorhizobium meliloti 1021]
gi|14523801|gb|AAK65343.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
Length = 103
Score = 38.2 bits (88), Expect = 0.60, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 106 GSGDFIESDSAVVQRIKEVLDNRVRPAVAR---DGGDIVFKGYRDG-IVFLSMRGACSGC 161
++ V I++ L + P + R D G I DG I ++M GC
Sbjct: 4 AEAMSEPENATVCDSIRDALRMIIDPELGRNIVDLGLIYDVSVEDGGIAHVTMTTTTKGC 63
Query: 162 PSASETLKYGVANILNHFVPEVK--DIR 187
P++ LK V N + +VP V+ ++R
Sbjct: 64 PASEY-LKEAVRNCV-WYVPGVEYAEVR 89
>gi|296270586|ref|YP_003653218.1| hypothetical protein Tbis_2624 [Thermobispora bispora DSM 43833]
gi|296093373|gb|ADG89325.1| hypothetical protein Tbis_2624 [Thermobispora bispora DSM 43833]
Length = 412
Score = 37.9 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFV 180
+++ ++ V A R G DG + +R A GC +++ ++ V +
Sbjct: 81 VRDRVEEAVGRAARRLGVTAELAALADGAARVRVRAA--GCGPSADAVRAAVEEAVRDAA 138
Query: 181 PEVKDIR 187
PE++ +
Sbjct: 139 PEIERVE 145
>gi|261400653|ref|ZP_05986778.1| ATP-dependent DNA helicase, RecQ family/ UvrD/REP helicase domain
protein [Neisseria lactamica ATCC 23970]
gi|269209560|gb|EEZ76015.1| ATP-dependent DNA helicase, RecQ family/ UvrD/REP helicase domain
protein [Neisseria lactamica ATCC 23970]
Length = 1741
Score = 37.9 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 74 RPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAV 133
+P VL I ++F I +GD D++ F SD Q+I E+L +
Sbjct: 467 KPDVLADITDNFREQAGIEFRQFIGDNARDNLSYEVFEASDGIKKQKIDELLHRELD--- 523
Query: 134 ARDGGDIVFKG----YRDGIVFLSMRG-AC 158
+ GG +VF G D +L +G AC
Sbjct: 524 HQRGGAVVFVGRRKSAEDYNEYLQKQGWAC 553
>gi|18976660|ref|NP_578017.1| hypothetical protein PF0288 [Pyrococcus furiosus DSM 3638]
gi|18892233|gb|AAL80412.1| hypothetical protein PF0288 [Pyrococcus furiosus DSM 3638]
Length = 211
Score = 37.9 bits (87), Expect = 0.79, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 11/138 (7%)
Query: 51 IASVYFGYDFITVG-KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGD 109
+ S+ D I + K++ D L + + E + G + G + + K +++ +
Sbjct: 59 VESLEIEGDVIKIRFKEKIDDATL-LEIYNKLRE--LEGIRQVEIGFVRETKDENLEITE 115
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLK 169
+++++KEV+D + V G K D V++ M GCP L+
Sbjct: 116 -----EMILEKLKEVIDPEIGMDVVNLGLIYELKINPDKTVYIKMTMTTPGCPLTLWLLR 170
Query: 170 YGVANILNHFVPEVKDIR 187
+L +P V+D+
Sbjct: 171 AVEEKVL--EIPGVRDVE 186
>gi|304320256|ref|YP_003853899.1| hypothetical protein PB2503_03407 [Parvularcula bermudensis
HTCC2503]
gi|303299158|gb|ADM08757.1| hypothetical protein PB2503_03407 [Parvularcula bermudensis
HTCC2503]
Length = 305
Score = 37.9 bits (87), Expect = 0.79, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 12/76 (15%)
Query: 8 TP--NPATLKFIPGQVVLVEGAI----------HFSNAKEAEISPLASRIFSIPGIASVY 55
TP PA + ++ G + V I F + R+F +P ++
Sbjct: 160 TPGHTPACMSYLIGDALFVGDTIFMPDYGTARCDFPGGDAVTLYRSIRRLFQLPDETRMF 219
Query: 56 FGYDFITVGKDQYDWE 71
+D+ + +D Y WE
Sbjct: 220 LCHDYKSETRDHYAWE 235
>gi|91217113|ref|ZP_01254075.1| putative outer membrane protein [Psychroflexus torquis ATCC 700755]
gi|91184713|gb|EAS71094.1| putative outer membrane protein [Psychroflexus torquis ATCC 700755]
Length = 1704
Score = 37.9 bits (87), Expect = 0.80, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 41/129 (31%), Gaps = 13/129 (10%)
Query: 10 NPATLKFIPGQVVLVEGAIHF-SNAKEAEIS-PLASRIFSIPGIASVYFGYDFI----TV 63
N L+FIP Q + F + E + P ++F V DFI ++
Sbjct: 83 NGNRLRFIPKQKLQPATTYQFNLDLSELYENLPKEDKVFQFKFETIV---PDFIIGLQSI 139
Query: 64 GKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKE 123
DW+++ + + + I D+ SD+ + + +
Sbjct: 140 QSYDADWQYISAEIEASDVLSLEN----IKKSISAQQNDSDLDVRFLTTSDANYFELVID 195
Query: 124 VLDNRVRPA 132
+ +
Sbjct: 196 SIYREKDDS 204
>gi|227903061|ref|ZP_04020866.1| metal-sulfur cluster biosynthetic protein [Lactobacillus
acidophilus ATCC 4796]
gi|227869194|gb|EEJ76615.1| metal-sulfur cluster biosynthetic protein [Lactobacillus
acidophilus ATCC 4796]
Length = 191
Score = 37.5 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 5/78 (6%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARD---GGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
E +V +I L + P + D G I + M SGCP +
Sbjct: 5 MKEEKIKLVDQIMTALQKVIDPELQVDIVNLGLIYGIDIDGDKATIQMTLTISGCPLSDY 64
Query: 167 TLKYGVANILNHFVPEVK 184
L+ + + VPE+K
Sbjct: 65 -LQKEIQKAVL-SVPEIK 80
>gi|58336509|ref|YP_193094.1| hypothetical protein LBA0162 [Lactobacillus acidophilus NCFM]
gi|58253826|gb|AAV42063.1| hypothetical protein LBA0162 [Lactobacillus acidophilus NCFM]
Length = 187
Score = 37.5 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 5/78 (6%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARD---GGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
E +V +I L + P + D G I + M SGCP +
Sbjct: 1 MKEEKIKLVDQIMTALQKVIDPELQVDIVNLGLIYGIDIDGDKATIQMTLTISGCPLSDY 60
Query: 167 TLKYGVANILNHFVPEVK 184
L+ + + VPE+K
Sbjct: 61 -LQKEIQKAVL-SVPEIK 76
>gi|327402311|ref|YP_004343149.1| von Willebrand factor type D protein [Fluviicola taffensis DSM
16823]
gi|327317819|gb|AEA42311.1| von Willebrand factor type D protein [Fluviicola taffensis DSM
16823]
Length = 618
Score = 37.5 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 13/67 (19%), Positives = 24/67 (35%)
Query: 56 FGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDS 115
G DF ++ K+ W+ +R L ME P + +M + +
Sbjct: 27 LGSDFQSIRKEMVAWDAVRGEWLASSMEAMADKKPTPDRNFPEEYTPAEMFNAMPTATQE 86
Query: 116 AVVQRIK 122
V +I+
Sbjct: 87 KVRGQIQ 93
>gi|327182706|gb|AEA31153.1| hypothetical protein LAB52_00830 [Lactobacillus amylovorus GRL
1118]
Length = 193
Score = 37.5 bits (86), Expect = 0.96, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARD---GGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
E +V +I VL + P + D G I + M SGCP ++
Sbjct: 1 MKEEKIELVDQIMTVLQKVIDPELQVDIVNLGLIYGIDIDGTKATVKMTLTISGCPLSTY 60
Query: 167 TLKYGVANIL 176
L+ + +
Sbjct: 61 -LQDHIKQAV 69
>gi|310877199|gb|ADP36960.1| hypothetical protein [Asterochloris sp. DA2]
Length = 74
Score = 37.1 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 9/77 (11%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+SA R+ LD +RPA+ GG + G + G P G+
Sbjct: 7 DNSASKGRVNTHLD-MLRPAIQSYGGKVDVLSVEAGKCIVHFEG-----PPPIG---EGI 57
Query: 173 ANILNHFVPEVKDIRTV 189
+ P+++ + V
Sbjct: 58 KAAIKDKFPDLQAVELV 74
>gi|261379087|ref|ZP_05983660.1| ATP-dependent DNA helicase, RecQ family/ UvrD/REP helicase domain
protein [Neisseria cinerea ATCC 14685]
gi|269144466|gb|EEZ70884.1| ATP-dependent DNA helicase, RecQ family/ UvrD/REP helicase domain
protein [Neisseria cinerea ATCC 14685]
Length = 1736
Score = 37.1 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 74 RPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAV 133
+P VL I ++F I +GD D++ F SD Q+I E+L +
Sbjct: 467 KPDVLADITDNFREQAGIEFRQFIGDNARDNLSYEVFEASDGIKKQKIDELLHRELD--- 523
Query: 134 ARDGGDIVFKG----YRDGIVFLSMRG-AC 158
+ GG +VF G +L +G AC
Sbjct: 524 HQRGGAVVFVGRRKSAEGYNKYLQKQGWAC 553
>gi|315453783|ref|YP_004074053.1| nifU protein-like protein [Helicobacter felis ATCC 49179]
gi|315132835|emb|CBY83463.1| nifU protein homolog [Helicobacter felis ATCC 49179]
Length = 284
Score = 37.1 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 94 NGGLGDMKLDDMGSGDFIESDSAVVQRIK---EVLDNRVRPAVARDGGDIVFKGYRDG 148
K SG+ D +VQ++K + +D +RP + DGG++ ++G
Sbjct: 224 EEQQLKEKAQKSLSGNLAFVDMTMVQKVKAIDQTIDVHIRPMLMMDGGNLEILDIKEG 281
>gi|327290050|ref|XP_003229737.1| PREDICTED: EMILIN-1-like, partial [Anolis carolinensis]
Length = 774
Score = 37.1 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 36/100 (36%), Gaps = 13/100 (13%)
Query: 92 IHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGI-- 149
+ G D + E+ + + + ++ LDNR+ +GG R +
Sbjct: 153 VEASLNGKQPADAAAHPEMKETLNEIQRHLQR-LDNRISD--QENGGGSTGSDVRGEVLR 209
Query: 150 -VFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRT 188
V ++G+C+ C GV + + + +R
Sbjct: 210 EVERRLQGSCASC-------LAGVEGLQRQQAEDRERMRA 242
>gi|242398120|ref|YP_002993544.1| hypothetical protein TSIB_0127 [Thermococcus sibiricus MM 739]
gi|242264513|gb|ACS89195.1| hypothetical protein TSIB_0127 [Thermococcus sibiricus MM 739]
Length = 108
Score = 37.1 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ V++++KEV+D + V G K D V++ M GCP + L V
Sbjct: 11 TKEMVLEKLKEVIDPEIGIDVVNLGLIYELKINPDNTVYVKMTMTTPGCPL-TMWLLQAV 69
Query: 173 ANILNHFVPEVKDIR 187
+ +P VKD
Sbjct: 70 EQKILE-IPGVKDAE 83
>gi|321448990|gb|EFX61677.1| hypothetical protein DAPPUDRAFT_272249 [Daphnia pulex]
Length = 197
Score = 36.7 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 27/102 (26%), Gaps = 14/102 (13%)
Query: 65 KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEV 124
+D +W+ I SG P + + EV
Sbjct: 100 RDDAEWDDWPDEPEDSIEIQPSSGQPAEKEASVASQEAIQPDPVQINPP---------EV 150
Query: 125 LDNRVRPAVARDGGDIVFK----GYRDGIVFL-SMRGACSGC 161
++ ++P R G F V L +R C C
Sbjct: 151 VETPLQPITTRAGRKCSFDLTSFDLTSSYVRLSRLRKGCGVC 192
>gi|329945959|ref|ZP_08293646.1| hypothetical protein HMPREF9056_01535 [Actinomyces sp. oral taxon
170 str. F0386]
gi|328528407|gb|EGF55385.1| hypothetical protein HMPREF9056_01535 [Actinomyces sp. oral taxon
170 str. F0386]
Length = 380
Score = 36.7 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 9/78 (11%)
Query: 116 AVVQRIKEVLDNRVRPAVAR---DGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKYG 171
+ E LD + P + R D G + DG+V + + +GCP LK
Sbjct: 4 PTHDAVMEALDRVIDPELRRPVTDLGMVSSVDIAEDGVVSVEVLLTVAGCP-----LKDT 58
Query: 172 VANILNHFVPEVKDIRTV 189
+ V V+ + V
Sbjct: 59 ITADTRREVGSVEGVTDV 76
>gi|253733323|ref|ZP_04867488.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus TCH130]
gi|253728675|gb|EES97404.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus TCH130]
gi|302751260|gb|ADL65437.1| Scaffold protein Nfu/NifU N terminal [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|320140324|gb|EFW32181.1| conserved domain protein [Staphylococcus aureus subsp. aureus
MRSA131]
Length = 69
Score = 36.7 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 41 LASRIFSIPGIASVYFGYDFITVGKD-QYDWEHLRPPVLGM 80
+ I + G+ S++ DFI+V K+ +WE + P V +
Sbjct: 27 FINDILKVEGVKSIFHVMDFISVDKENDANWETVLPKVEAV 67
>gi|315037403|ref|YP_004030971.1| hypothetical protein LA2_00895 [Lactobacillus amylovorus GRL 1112]
gi|325955873|ref|YP_004286483.1| hypothetical protein LAC30SC_00760 [Lactobacillus acidophilus 30SC]
gi|312275536|gb|ADQ58176.1| hypothetical protein LA2_00895 [Lactobacillus amylovorus GRL 1112]
gi|325332438|gb|ADZ06346.1| hypothetical protein LAC30SC_00760 [Lactobacillus acidophilus 30SC]
Length = 193
Score = 36.7 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARD---GGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
E +V +I L + P + D G I + M SGCP ++
Sbjct: 1 MKEEKIELVDQIMTALQKVIDPELQVDIVNLGLIYGIDIEGTKATVKMTLTISGCPLSTY 60
Query: 167 TLKYGVANIL 176
L+ + +
Sbjct: 61 -LQDHIKQAV 69
>gi|302420601|ref|XP_003008131.1| extracellular cell wall glucanase Crf1 [Verticillium albo-atrum
VaMs.102]
gi|261353782|gb|EEY16210.1| extracellular cell wall glucanase Crf1 [Verticillium albo-atrum
VaMs.102]
Length = 534
Score = 36.7 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 39/167 (23%)
Query: 9 PNPA-----TLKF--IPGQVVLVE--GAIHFSNAKEAE-------ISPLASRIFSIPG-- 50
PNPA T F P + + G I FS+ A SP F G
Sbjct: 38 PNPALGMAHTFNFNATPSKDLWETHVGPISFSDKDGAAFTITKQGDSPTLRSHFYFFGGR 97
Query: 51 -------------IASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGL 97
I+SV +++ D+ DWE + + +F G I G
Sbjct: 98 TEIILKAAAGKGIISSVM----WLSDTLDEVDWEFVGVNSTTALSNYFGKGKEIFTEGKD 153
Query: 98 GDMKLDDMGSGDFIESDSAVVQRIKEVLDNR----VRPAVARDGGDI 140
+ + + + R++ +D + + A A +GG++
Sbjct: 154 HPVAGAPVWDDFHNYTTTWTEDRLEWFIDGQSVRVLNRADALEGGNL 200
>gi|332158570|ref|YP_004423849.1| dTDP-4-keto-l-rhamnose reductase related protein [Pyrococcus sp.
NA2]
gi|331034033|gb|AEC51845.1| dTDP-4-keto-l-rhamnose reductase related protein [Pyrococcus sp.
NA2]
Length = 174
Score = 36.7 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 42/111 (37%), Gaps = 5/111 (4%)
Query: 79 GMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGG 138
+++ + I + ++ ++ +++++KEV+D + V G
Sbjct: 43 STLLKIYNKVREIEGVKQIEIGFKREIKETSVKVTEDMILEKLKEVIDPEIGIDVVNLGL 102
Query: 139 DIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIRTV 189
K D V++ M GCP TL + + V EV +R V
Sbjct: 103 IYELKINPDNTVYIKMTMTTPGCP---LTL--WILRAVEEKVLEVPGVRDV 148
>gi|307305143|ref|ZP_07584892.1| protein of unknown function DUF59 [Sinorhizobium meliloti BL225C]
gi|46403695|gb|AAS92901.1| hypothetical protein [Sinorhizobium meliloti]
gi|306902483|gb|EFN33078.1| protein of unknown function DUF59 [Sinorhizobium meliloti BL225C]
Length = 97
Score = 36.7 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 112 ESDSAVVQRIKEVLDNRVRPAVAR---DGGDIVFKGYRDG-IVFLSMRGACSGCPSASET 167
++ V I++ L + P + R D G I DG I ++M GCP++
Sbjct: 4 PENATVCDSIRDALRMIIDPELGRNIVDLGLIYDVSVEDGGIAHVTMTTTTKGCPASEY- 62
Query: 168 LKYGVANILNHFVPEVK--DIR 187
LK V N + +VP V+ ++R
Sbjct: 63 LKEAVRNCV-WYVPGVEYAEVR 83
>gi|309379197|emb|CBX22154.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 1741
Score = 36.3 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 74 RPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAV 133
+P VL I ++F I +GD D++ F SD Q+I E+L +
Sbjct: 467 KPDVLADITDNFREQAGIEFRQFIGDNARDNLSYEVFEASDGIKKQKIDELLHRELD--- 523
Query: 134 ARDGGDIVFKG----YRDGIVFLSMRG-AC 158
+ GG +VF G +L +G AC
Sbjct: 524 HQSGGAVVFVGRRKSAEGYNEYLQKQGWAC 553
>gi|292492898|ref|YP_003528337.1| hypothetical protein Nhal_2887 [Nitrosococcus halophilus Nc4]
gi|291581493|gb|ADE15950.1| protein of unknown function DUF59 [Nitrosococcus halophilus Nc4]
Length = 101
Score = 36.3 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 113 SDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
+ + EV+D +V ++ D G + G V + M CP ++ G+
Sbjct: 2 DQDKLTVALHEVVDPKVGVSII-DLGLVYHIQVEGGRVDIRMTMTTPACPLPES-IRMGM 59
Query: 173 ANILNHFVPEVKDI 186
+ +PE+ ++
Sbjct: 60 ETAIQRHLPEITEV 73
>gi|255086373|ref|XP_002509153.1| predicted protein [Micromonas sp. RCC299]
gi|226524431|gb|ACO70411.1| predicted protein [Micromonas sp. RCC299]
Length = 1027
Score = 36.3 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 3/81 (3%)
Query: 77 VLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARD 136
VL H + D ++ + E++ ++ I + LD V A D
Sbjct: 83 VLATYRAHVAAEDEVVLPALAARVSNVAHAYELEHEAEDSLFDGITQALDEAVELIAAND 142
Query: 137 GGDIVFKGYRDGIVFLSMRGA 157
GG ++GA
Sbjct: 143 GGGPAPTDAEG---RERLQGA 160
>gi|15895944|ref|NP_349293.1| maltodextrin glucosidase [Clostridium acetobutylicum ATCC 824]
gi|15025718|gb|AAK80633.1|AE007766_6 Possible maltodextrin glucosidase [Clostridium acetobutylicum ATCC
824]
gi|325510096|gb|ADZ21732.1| putative maltodextrin glucosidase [Clostridium acetobutylicum EA
2018]
Length = 451
Score = 36.3 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 33 AKEAEISPLASRIFSIPGIASVYFGYDF-ITVGKDQYDWEHLRPPVL 78
A I P+ + +F+IPGI S+Y+G DF IT K ++LRP +
Sbjct: 292 IDAANIYPIYTILFTIPGIPSIYYGSDFGITGVKQNNSDKYLRPRLK 338
>gi|312375045|gb|EFR22490.1| hypothetical protein AND_15185 [Anopheles darlingi]
Length = 638
Score = 36.3 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%)
Query: 85 FISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIK----EVLDNRVRPAVARDGGDI 140
+ S I D G D ++ ++ + +K E+ + P GD
Sbjct: 428 YSSELTKIVTEARKSTSADGNGVDDELQGNTIIETNVKKDDGELCPSTHFPVGQEVMGDC 487
Query: 141 VFKGYRDGIVFLSMRGACSGCPSASET 167
F + V L + GA +GCP A++T
Sbjct: 488 PFVSTEE-KVDLLLAGAMAGCPMAAKT 513
>gi|313668408|ref|YP_004048692.1| DNA helicase [Neisseria lactamica ST-640]
gi|313005870|emb|CBN87326.1| putative DNA helicase [Neisseria lactamica 020-06]
Length = 1741
Score = 36.3 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 74 RPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAV 133
+P VL I ++F I +GD D++ F SD Q+I E+L +
Sbjct: 467 KPDVLADITDNFREQAGIEFRQFIGDNARDNLSYEVFEASDGIKKQKIDELLHRELD--- 523
Query: 134 ARDGGDIVFKG----YRDGIVFLSMRG-AC 158
+ GG +VF G +L +G AC
Sbjct: 524 HQRGGAVVFVGRRKSAEGYNEYLQKQGWAC 553
>gi|296314120|ref|ZP_06864061.1| ATP-dependent DNA helicase, UvrD/REP family [Neisseria
polysaccharea ATCC 43768]
gi|296839271|gb|EFH23209.1| ATP-dependent DNA helicase, UvrD/REP family [Neisseria
polysaccharea ATCC 43768]
Length = 1277
Score = 36.3 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 74 RPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAV 133
+P VL I ++F I +GD D++ F SD Q+I E+L +
Sbjct: 467 KPDVLADITDNFREQAGIEFRQFIGDNARDNLSYEVFEASDGIKKQKIDELLHRELD--- 523
Query: 134 ARDGGDIVFKG----YRDGIVFLSMRG-AC 158
+ GG +VF G +L +G AC
Sbjct: 524 HQRGGAVVFVGRRKSAEGYNEYLQKQGWAC 553
>gi|115523965|ref|YP_780876.1| cation diffusion facilitator family transporter [Rhodopseudomonas
palustris BisA53]
gi|115517912|gb|ABJ05896.1| cation diffusion facilitator family transporter [Rhodopseudomonas
palustris BisA53]
Length = 460
Score = 36.3 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 14/126 (11%)
Query: 68 YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDN 127
D + + I + F + + + + +L V IK+ L
Sbjct: 336 VDAHDIAHALEHNIRDEFGADVEVDTHIEPLEPELPHGADAAPTR-----VAEIKQALSR 390
Query: 128 RVRPAVARDGGDIVFKGYRDG-IVFLSMRGACSGCPS-ASETLKYG---VANILNHFVPE 182
+V + + G IV C PS + T+ + L P
Sbjct: 391 FASDSVIHHIHSVRVRDTDAGEIVNFH----CYAAPSMSVITVHEHCDDIERELRRAYPS 446
Query: 183 VKDIRT 188
VK + +
Sbjct: 447 VKRVIS 452
>gi|315231095|ref|YP_004071531.1| aromatic ring hydroxylating enzyme [Thermococcus barophilus MP]
gi|315184123|gb|ADT84308.1| aromatic ring hydroxylating enzyme [Thermococcus barophilus MP]
Length = 107
Score = 36.3 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 107 SGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
+ + S A+++++KEV+D + V G + D V++ M GCP
Sbjct: 4 AEEVKLSKEAILEKLKEVVDPEIGIDVVNLGLIYELEIRPDNTVYVKMTMTTPGCPLTMW 63
Query: 167 TLKYGVANILNHFVPEVKDIR 187
LK IL +P VKD
Sbjct: 64 LLKAVEEKIL--EIPGVKDAE 82
>gi|307595867|ref|YP_003902184.1| hypothetical protein Vdis_1759 [Vulcanisaeta distributa DSM 14429]
gi|307551068|gb|ADN51133.1| protein of unknown function DUF59 [Vulcanisaeta distributa DSM
14429]
Length = 153
Score = 36.3 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 3/103 (2%)
Query: 86 ISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKG 144
+S + +I + + + + +++ ++ V D + P D G I
Sbjct: 3 VSNEEVIGTTNNEETEEPIFKTNLPNDKVKELIEILRNVYDPEI-PINVYDLGLIYEVMM 61
Query: 145 YRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
D +V + M GCP + L Y V + +P+ KDI
Sbjct: 62 DNDKVVHVKMTLTAVGCPLSEN-LGYQVGAAIQQAIPDAKDIE 103
>gi|322383508|ref|ZP_08057283.1| lyase-like protein [Paenibacillus larvae subsp. larvae B-3650]
gi|321152220|gb|EFX45051.1| lyase-like protein [Paenibacillus larvae subsp. larvae B-3650]
Length = 364
Score = 35.9 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 6/86 (6%)
Query: 23 LVEGAI-HFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK-DQYDWEHLRPPVLGM 80
L +G + F+ + R+ IP + SV+ DFI + + + DW+ +L
Sbjct: 9 LPKGKMYSFTREERNSAPGYIRRLLDIPDVKSVFQVTDFIALDRTPKGDWK----QILAA 64
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMG 106
E F + + D ++
Sbjct: 65 AREVFGESGVSVEDAAAQDSGYGEVT 90
>gi|227894220|ref|ZP_04012025.1| metal-sulfur cluster biosynthetic protein [Lactobacillus ultunensis
DSM 16047]
gi|227863940|gb|EEJ71361.1| metal-sulfur cluster biosynthetic protein [Lactobacillus ultunensis
DSM 16047]
Length = 197
Score = 35.9 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Query: 110 FIESDSAVVQRIKEVLDNRVRPAVARD---GGDIVFKGYRDGIVFLSMRGACSGCPSASE 166
E +V RI L + P + D G I + M SGCP +S
Sbjct: 5 MKEEKIELVDRIMTALQKVIDPELQVDIVNLGLIYGINIEGKKATVKMTLTISGCPLSSY 64
Query: 167 TLKYGVANIL 176
L+ + +
Sbjct: 65 -LQEQIQKAV 73
>gi|326796005|ref|YP_004313825.1| beta-lactamase [Marinomonas mediterranea MMB-1]
gi|326546769|gb|ADZ91989.1| beta-lactamase domain protein [Marinomonas mediterranea MMB-1]
Length = 291
Score = 35.9 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 12 ATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQYDWE 71
TL F+P F + + RIF++P ++ +D+ G+D+Y WE
Sbjct: 166 DTL-FMPD---YGTARCDFPGGDASTLYRSIQRIFALPDSTRLFMCHDYKAPGRDEYQWE 221
Query: 72 HLRPP 76
Sbjct: 222 TTVAE 226
>gi|14764516|gb|AAK72104.1| putative Hs1pro-1-like protein [Cicer arietinum]
Length = 268
Score = 35.5 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 10/84 (11%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETL 168
+ D V+RI ++L + D GD F ++ LSM+ +C S
Sbjct: 83 EKAAEDCYTVERIWKLLTEVEDVHLMMDPGD--FLKLKN---QLSMKSSCYETASFCMRS 137
Query: 169 KYGVANI-----LNHFVPEVKDIR 187
K V L H VPE+ D+
Sbjct: 138 KELVEVTKMCRDLRHRVPEILDVE 161
>gi|325967732|ref|YP_004243924.1| phenylacetic acid degradation protein [Vulcanisaeta moutnovskia
768-28]
gi|323706935|gb|ADY00422.1| phenylacetic acid degradation protein [Vulcanisaeta moutnovskia
768-28]
Length = 157
Score = 35.5 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 3/103 (2%)
Query: 86 ISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDI-VFKG 144
+S + I ++ + + + + +++ ++ V D + P D G I
Sbjct: 3 VSNEEITNSTNNENDEEPIFKTNLPSDKTKELIEILRNVYDPEI-PIDVYDLGLIYEVML 61
Query: 145 YRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEVKDIR 187
D +V + M GCP + L Y V + +P+ KDI
Sbjct: 62 DNDKVVHVKMTLTAVGCPLSEN-LGYQVGAAIQQAIPDAKDIE 103
>gi|327540715|gb|EGF27285.1| heavy metal efflux pump, CzcA family [Rhodopirellula baltica WH47]
Length = 1171
Score = 35.5 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 13/86 (15%)
Query: 31 SNAKEAEISPLASRIFSIPGIASV----YFGYDFITVG-KDQYD--WEHLRPPVLGMIME 83
+ ++ PL+ + ++PG SV FGY F+ V KD+ D W + E
Sbjct: 59 KDIEDQVTYPLSVSLLAVPGAESVRGKSMFGYSFVQVTFKDEIDFYWA------RSRVSE 112
Query: 84 HFISGDPIIHNGGLGDMKLDDMGSGD 109
S + +G + + D G G
Sbjct: 113 QLGSAASQLPDGVVPQLGPDATGLGQ 138
>gi|310643486|ref|YP_003948244.1| glucose-specific phosphotransferase enzyme iia component
[Paenibacillus polymyxa SC2]
gi|309248436|gb|ADO58003.1| Glucose-specific phosphotransferase enzyme IIA component
[Paenibacillus polymyxa SC2]
Length = 681
Score = 35.2 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Query: 71 EHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVR 130
E + PV G +++ DP+ GD G + S V ++ V ++
Sbjct: 533 EDIVMPVNGELVDISTVPDPVFAERMTGDGFAVVPNDGTIV---SPVYGKVFNVFPSKHA 589
Query: 131 PAVARDGGDIVFKGYRDGIVFLSMRG 156
+ DGG V V L +G
Sbjct: 590 VGIQSDGGKEVLVHIGVNTVKLKGQG 615
>gi|332877126|ref|ZP_08444877.1| hypothetical protein HMPREF9074_00603 [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332685016|gb|EGJ57862.1| hypothetical protein HMPREF9074_00603 [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 1225
Score = 35.2 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 65 KDQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEV 124
K ++DW+ + P V + P + + + ESD A V++I++
Sbjct: 204 KAEFDWKFVEPEVYEVYTAKKNVLKPQLEAADEAGY-TNYAKYKELYESDKATVEQIEDA 262
Query: 125 LDN 127
+
Sbjct: 263 AEE 265
>gi|119873332|ref|YP_931339.1| hypothetical protein Pisl_1848 [Pyrobaculum islandicum DSM 4184]
gi|119674740|gb|ABL88996.1| protein of unknown function DUF59 [Pyrobaculum islandicum DSM 4184]
Length = 131
Score = 35.2 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 116 AVVQRIKEVLDNRVRPAV---ARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGV 172
V++I EVL P + D G I DGI+ ++M GCP A + V
Sbjct: 14 EKVKKIIEVLREVYDPEIPINVYDLGLIRKVVLEDGILKVTMTLTAVGCPVAGSVAQE-V 72
Query: 173 ANILNHFVPEVKDIR 187
L +PE KD+
Sbjct: 73 GYALQTVMPEAKDVE 87
>gi|288960863|ref|YP_003451203.1| glutamate dehydrogenase [Azospirillum sp. B510]
gi|288913171|dbj|BAI74659.1| glutamate dehydrogenase [Azospirillum sp. B510]
Length = 1609
Score = 35.2 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 14/98 (14%)
Query: 47 SIPGIASVYFG----------YDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPIIHNGG 96
++ G+ASVYFG D + K W+ + I++ + +
Sbjct: 1497 AVEGVASVYFGLGRRFGLEWLRDRASTAKVDNHWQ---RQAVAAIVDDLFAHQSALTVRV 1553
Query: 97 LGDMKLDDMGSGDFIESDSAVVQRIKEVL-DNRVRPAV 133
L + +I S VV+R++++L + R +PAV
Sbjct: 1554 LESAGDEASAVDGWIASRKLVVERVEQLLAELRAQPAV 1591
>gi|288871521|ref|ZP_06117919.2| putative lipoprotein [Clostridium hathewayi DSM 13479]
gi|288863127|gb|EFC95425.1| putative lipoprotein [Clostridium hathewayi DSM 13479]
Length = 796
Score = 35.2 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 13/116 (11%)
Query: 22 VLVEGAIHFSNAKE-AEISPLASRIFSIPGIASVYFGYDFITVGKDQYDWEHLRPPVLGM 80
V+ +G F+ ++ AE +P +++ P I Y DF + D +W+ LR +
Sbjct: 251 VIEQGQ--FTTLEQKAETNPNIRKLYGAPFI---YLWGDF-AISADDINWQALRMSLSSP 304
Query: 81 IMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARD 136
ME+F+S + NG L ++ D++ K V+ + + + RD
Sbjct: 305 AMEYFLSFAGRLENGQEFTAVLKEIQGQDYVAEYQ------KNVICSYISQLLKRD 354
>gi|207110188|ref|ZP_03244350.1| conserved hypothetical nifU-like protein [Helicobacter pylori
HPKX_438_CA4C1]
Length = 45
Score = 35.2 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 109 DFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSM 154
SD + + ++ V++ ++RP + +DGG+I G + +++++
Sbjct: 1 MIEFSDEDLQKPVRIVIE-KIRPYLLKDGGNIEVLGVKSMKIYVAL 45
>gi|223939589|ref|ZP_03631464.1| hypothetical protein Cflav_PD1433 [bacterium Ellin514]
gi|223891747|gb|EEF58233.1| hypothetical protein Cflav_PD1433 [bacterium Ellin514]
Length = 380
Score = 35.2 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Query: 21 VVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQYDWEHL 73
L +N + + + +F G G D IT+ +D WEH+
Sbjct: 124 PPLGTSPAKLTNTSKPSTTEIPEAVFHFKGTID---GSDKITITRDGALWEHV 173
>gi|240102430|ref|YP_002958739.1| Component of ring hydroxylating complex, putative [Thermococcus
gammatolerans EJ3]
gi|239909984|gb|ACS32875.1| Component of ring hydroxylating complex, putative [Thermococcus
gammatolerans EJ3]
Length = 176
Score = 35.2 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Query: 101 KLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGACSG 160
+ + +G+ ++ +++++KEV+D + V G K D V++ M G
Sbjct: 67 EREVKEAGNVKITEEMILEKLKEVIDPEIGIDVVNLGLIYEVKVNPDNTVYVKMTMTTPG 126
Query: 161 CPSASETLKYGVANILNHFVPEVKDIRT 188
CP L + + + E+ ++
Sbjct: 127 CP-----LTMWILRAVEDKILEIPGVKD 149
>gi|146311060|ref|YP_001176134.1| CRISPR-associated helicase Cas3 family protein [Enterobacter sp.
638]
gi|145317936|gb|ABP60083.1| CRISPR-associated helicase, Cas3 family [Enterobacter sp. 638]
Length = 1072
Score = 35.2 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 6/52 (11%)
Query: 24 VEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQYDWEHLRP 75
+ H K+A SP +F + G + + G DF DW + P
Sbjct: 792 PQHIWHLPEVKQALASPFQHHLFVVVGTSVLEVGRDF------DADWGIIEP 837
>gi|326774170|ref|ZP_08233452.1| ATP-binding protein [Actinomyces viscosus C505]
gi|326636309|gb|EGE37213.1| ATP-binding protein [Actinomyces viscosus C505]
Length = 380
Score = 34.8 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 9/79 (11%)
Query: 115 SAVVQRIKEVLDNRVRPAVAR---DGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKY 170
+ E L + P + R D G + DG+V + + +GCP LK
Sbjct: 3 QPTHDAVMEALARVIDPELHRPITDLGMVSTVDIAEDGVVSVEVLLTVAGCP-----LKD 57
Query: 171 GVANILNHFVPEVKDIRTV 189
+ V V+ + V
Sbjct: 58 TITADTRREVGTVEGVTEV 76
>gi|325068249|ref|ZP_08126922.1| ATPase-like, ParA/MinD [Actinomyces oris K20]
Length = 380
Score = 34.4 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 9/79 (11%)
Query: 115 SAVVQRIKEVLDNRVRPAVAR---DGGDIVFKGY-RDGIVFLSMRGACSGCPSASETLKY 170
+ E L + P + R D G + DG+V + + +GCP LK
Sbjct: 3 QPTHDAVMEALARVIDPELHRPITDLGMVSTVDIAEDGVVSVEVLLTVAGCP-----LKD 57
Query: 171 GVANILNHFVPEVKDIRTV 189
+ V V+ + V
Sbjct: 58 TITADTRREVSTVEGVTEV 76
>gi|295400185|ref|ZP_06810165.1| phenylacetate-CoA oxygenase, PaaJ subunit [Geobacillus
thermoglucosidasius C56-YS93]
gi|294977964|gb|EFG53562.1| phenylacetate-CoA oxygenase, PaaJ subunit [Geobacillus
thermoglucosidasius C56-YS93]
Length = 164
Score = 34.4 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Query: 118 VQRIKEVLDNRVRPAVAR----DGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
V+RI E+LD+ P + D G + + G V + + GCP+ ++ V
Sbjct: 7 VERIMEMLDSVKDPEIDSVSVIDLGMVEDVQVQHGEVTVKLLPTFIGCPALDI-IQQRVE 65
Query: 174 NILNHFVPEVKDIRTV 189
L +K I V
Sbjct: 66 QTLLQ----LKGIDRV 77
>gi|312110573|ref|YP_003988889.1| phenylacetate-CoA oxygenase, PaaJ subunit [Geobacillus sp. Y4.1MC1]
gi|311215674|gb|ADP74278.1| phenylacetate-CoA oxygenase, PaaJ subunit [Geobacillus sp. Y4.1MC1]
Length = 164
Score = 34.4 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Query: 118 VQRIKEVLDNRVRPAVAR----DGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVA 173
V+RI E+LD+ P + D G + + G V + + GCP+ ++ V
Sbjct: 7 VERIMEMLDSVKDPEIDSVSVIDLGMVEDVQVQHGEVTVKLLPTFIGCPALDI-IQQRVE 65
Query: 174 NILNHFVPEVKDIRTV 189
L +K I V
Sbjct: 66 QTLLQ----LKGIDRV 77
>gi|257792288|ref|YP_003182894.1| chorismate synthase [Eggerthella lenta DSM 2243]
gi|317490209|ref|ZP_07948697.1| chorismate synthase [Eggerthella sp. 1_3_56FAA]
gi|257476185|gb|ACV56505.1| chorismate synthase [Eggerthella lenta DSM 2243]
gi|316910703|gb|EFV32324.1| chorismate synthase [Eggerthella sp. 1_3_56FAA]
Length = 390
Score = 34.4 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 21/45 (46%)
Query: 16 FIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDF 60
F LV G ++ A + S L + +FSIP I V FG F
Sbjct: 218 FRVVVTGLVPGVGGYATADDRLTSRLGAALFSIPAIKGVEFGLGF 262
>gi|90423356|ref|YP_531726.1| cation diffusion facilitator family transporter [Rhodopseudomonas
palustris BisB18]
gi|90105370|gb|ABD87407.1| cation diffusion facilitator family transporter [Rhodopseudomonas
palustris BisB18]
Length = 460
Score = 34.4 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 41/125 (32%), Gaps = 12/125 (9%)
Query: 68 YDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDN 127
+ + + I++ F + + + + +L +S +A V+ I+ L
Sbjct: 336 IEAHDIAHQLEHHIVDEFGTDVEVDTHIEPLEPELPHGA-----DSSAARVEEIRAALAG 390
Query: 128 RVRPAVARDGGDIVFKGYRDGIVFLSMRGAC-SGCPSASETLKYG---VANILNHFVPEV 183
V D + + G V ++ C + + + + L P V
Sbjct: 391 FASDGVINDIHSVRVRDTDAGEV-VNFH--CHAAAAMSVIAVHEHVDEIERKLRRAFPSV 447
Query: 184 KDIRT 188
K + +
Sbjct: 448 KRVIS 452
>gi|262215904|gb|ACY36944.1| tenectin isoform 2 [Drosophila melanogaster]
gi|262215906|gb|ACY36945.1| tenectin isoform 1 [Drosophila melanogaster]
Length = 2819
Score = 34.4 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 37/111 (33%), Gaps = 19/111 (17%)
Query: 6 EDTPNPATLKFIPGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK 65
ED P P+ IP + + + I S + A+ SP +T
Sbjct: 440 EDVPKPSQ---IPEKEITEDELIKVSTSAPAKASPEEE----------------VVTATT 480
Query: 66 DQYDWEHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSA 116
E ++P G I E G P G G+ + D + E++
Sbjct: 481 SAPTEEDVKPTTAGTISEEEEEGKPTPAEEGSGEEEKDVKVTAAPEETEDE 531
>gi|254491729|ref|ZP_05104908.1| Hsp90 protein, putative [Methylophaga thiooxidans DMS010]
gi|224463207|gb|EEF79477.1| Hsp90 protein, putative [Methylophaga thiooxydans DMS010]
Length = 635
Score = 34.4 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 39/105 (37%), Gaps = 10/105 (9%)
Query: 32 NAKEAEISPLASRIFSIPGIASVYFGYDFITVGKDQYDWEHLRPPVLGMIMEHFISGDPI 91
+ A+ SP +F GI V D + +W L + +H S
Sbjct: 445 SFAAAKNSP-HLEVFRKKGIE-VLLLSDRV------DEW--LTQSLTEFDGKHMQSVAKG 494
Query: 92 IHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARD 136
+ G + + + + ++ +V+R+K+ LD +V+
Sbjct: 495 DLDLGELEDEEEKKAHEEIDKNFEDLVERVKKTLDEKVKDVRITH 539
>gi|116334988|ref|YP_802483.1| hypothetical protein CRP_086 [Candidatus Carsonella ruddii PV]
gi|116235269|dbj|BAF35117.1| hypothetical protein [Candidatus Carsonella ruddii PV]
Length = 178
Score = 34.4 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Query: 117 VVQRIKEVLDNRVRPAVARDGGDIVFKGY--RDGIVFLSMRGACSGCPSASETLKYGV 172
++ +I ++ + + G I + + + +S G CS C + T +
Sbjct: 106 ILNKIFFLIKCIINKKLILHNGAIKIDIFNFKKKTLLISFIGNCSTCSISKNTFNNFI 163
>gi|15897518|ref|NP_342123.1| hypothetical protein SSO0601 [Sulfolobus solfataricus P2]
gi|284174837|ref|ZP_06388806.1| hypothetical protein Ssol98_09316 [Sulfolobus solfataricus 98/2]
gi|2253628|gb|AAB63027.1| unknown [Sulfolobus solfataricus P2]
gi|6015872|emb|CAB57699.1| hypothetical protein [Sulfolobus solfataricus P2]
gi|13813767|gb|AAK40913.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
gi|261602279|gb|ACX91882.1| protein of unknown function DUF59 [Sulfolobus solfataricus 98/2]
Length = 132
Score = 34.4 bits (78), Expect = 8.5, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 32/87 (36%), Gaps = 6/87 (6%)
Query: 105 MGSGDFIESDSAVVQRIKEVLDNRVRPAVARD----GGDIVFKGYRDGIVFLSMRGACSG 160
M S ++I E L + P + D G K DG V+L + G
Sbjct: 1 MSSQQQKVDKEEWKKKIMEALKDVYDPEIPVDIVNLGLIYDLKINDDGDVYLRLGLTAPG 60
Query: 161 CPSASETLKYGVANILNHFVPEVKDIR 187
CP + L Y V ++ VP K +
Sbjct: 61 CPVVDD-LIYTVEQVIKESVPA-KSVE 85
>gi|302532413|ref|ZP_07284755.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Streptomyces
sp. C]
gi|302441308|gb|EFL13124.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Streptomyces
sp. C]
Length = 153
Score = 34.0 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 44/129 (34%), Gaps = 28/129 (21%)
Query: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESD------------SAVVQRIKE 123
++ ++ME + +G I D + + V RI
Sbjct: 36 ELVRVLMEFYGAGLARIVERLTALAPGADPLAALLDDELTASLLTLHDLHPEDVHTRIAR 95
Query: 124 VLDNRVRPAVARDGGDIVFKGYRDGIVFLSMRGA----CSGCPS-ASETLKYGVANILNH 178
LD+ GY + L +R A C GC S A +TL+ + +++
Sbjct: 96 ALDSLPE---------AELAGYDEDDGTLRLRTATDTGC-GCGSTAEDTLRR-IEDVVAA 144
Query: 179 FVPEVKDIR 187
F PEV +
Sbjct: 145 FAPEVTSVE 153
>gi|308070299|ref|YP_003871904.1| PTS system glucose-specific EIICBA component (EIICBA-Glc)
[Paenibacillus polymyxa E681]
gi|305859578|gb|ADM71366.1| PTS system glucose-specific EIICBA component (EIICBA-Glc)
[Paenibacillus polymyxa E681]
Length = 681
Score = 34.0 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Query: 71 EHLRPPVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVR 130
E + PV G +++ DP+ GD G + S V ++ V ++
Sbjct: 533 EDIVMPVNGELVDISTVPDPVFAERMTGDGFAVVPNDGTIV---SPVYGKVFNVFPSKHA 589
Query: 131 PAVARDGGDIVFKGYRDGIVFLSMRG 156
+ DGG V V L +G
Sbjct: 590 IGIQSDGGKEVLVHIGVNTVKLKGQG 615
>gi|219114098|ref|XP_002176226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402810|gb|EEC42787.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 476
Score = 34.0 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Query: 78 LGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFIESDSAVVQRIKEVLDNRVRPAVARDG 137
+ +I+E SG I G + + +F E AVV++ EV + + D
Sbjct: 51 MEVIVEGVQSGTDTIVEGAHDIGERVQETTSEFQE---AVVEQYNEVKETFLDELHEADD 107
Query: 138 GDIVFKGY 145
GD+ F
Sbjct: 108 GDMYFLDM 115
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.310 0.162 0.541
Lambda K H
0.267 0.0496 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,220,810,192
Number of Sequences: 14124377
Number of extensions: 191968515
Number of successful extensions: 483752
Number of sequences better than 10.0: 2088
Number of HSP's better than 10.0 without gapping: 3244
Number of HSP's successfully gapped in prelim test: 640
Number of HSP's that attempted gapping in prelim test: 475942
Number of HSP's gapped (non-prelim): 4185
length of query: 189
length of database: 4,842,793,630
effective HSP length: 131
effective length of query: 58
effective length of database: 2,992,500,243
effective search space: 173565014094
effective search space used: 173565014094
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 78 (34.4 bits)