HHsearch alignment for GI: 254780431 and conserved domain: COG3415

>COG3415 Transposase and inactivated derivatives [DNA replication, recombination, and repair].

Probab=94.19  E-value=0.14  Score=32.04  Aligned_cols=40  Identities=25%  Similarity=0.244  Sum_probs=36.8

Q ss_pred             CHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHC
Q ss_conf             78999999999981865889999967854346666777514
Q gi|254780431|r    4 TVERIDKLKKFWSEGLSASQIAVQLGGVTRNAVIGKLHRLF   44 (178)
Q Consensus         4 Tderve~LkkLW~eG~SasqIA~~lGgvtRNAVIGK~hRLg   44 (178)
T Consensus         7 ~~~R~~~~~~~~~~G~S~re~Ak~~g-vs~sTvy~wv~r~~   46 (138)
T COG3415           7 NDLRERVVDAVVGEGLSCREAAKRFG-VSISTVYRWVRRYR   46 (138)
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHC-CCHHHHHHHHHHHC
T ss_conf             89999999999976854999999969-22999999998733