HHsearch alignment for GI: 254780431 and conserved domain: PRK00118
>PRK00118 putative DNA-binding protein; Validated.
Probab=91.15 E-value=0.49 Score=28.47 Aligned_cols=38 Identities=24% Similarity=0.430 Sum_probs=32.2
Q ss_pred CHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 789999999999818658899999678543466667775
Q gi|254780431|r 4 TVERIDKLKKFWSEGLSASQIAVQLGGVTRNAVIGKLHR 42 (178)
Q Consensus 4 Tderve~LkkLW~eG~SasqIA~~lGgvtRNAVIGK~hR 42 (178)
T Consensus 19 T~kQ~~~~~lyy~~DlSl~EIAe~~~-iSRQaV~D~ikr 56 (105)
T PRK00118 19 TEKQRNYMELYYLDDYSLGEIAEEFN-VSRQAVYDNIKR 56 (105)
T ss_pred CHHHHHHHHHHHHCCCCHHHHHHHHC-CCHHHHHHHHHH
T ss_conf 59999999999885499999989969-859999999999