HHsearch results for GI: 254780431 and protein with PDBid: 1je8_A

>1je8_A Nitrate/nitrite response regulator protein NARL; protein-DNA complex, two-component response regulator, helix-turn-helix, DNA bending; 2.12A {Escherichia coli} SCOP: a.4.6.2 PDB: 1zg1_A 1zg5_A

Probab=91.22  E-value=0.27  Score=28.73  Aligned_cols=43  Identities=30%  Similarity=0.389  Sum_probs=31.2

Q ss_pred             CHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHH----HCCCCC
Q ss_conf             789999999999818658899999678543466667775----145544
Q gi|254780431|r    4 TVERIDKLKKFWSEGLSASQIAVQLGGVTRNAVIGKLHR----LFLSNR   48 (178)
Q Consensus         4 Tderve~LkkLW~eG~SasqIA~~lGgvtRNAVIGK~hR----LgLs~R   48 (178)
                      |+--.+.|+ |+.+|+|..|||..|| +|.+.|=--+.+    ||..+|
T Consensus        23 T~rE~~vl~-lla~G~s~~eIA~~L~-iS~~TV~~~~~~i~~Klgv~~r   69 (82)
T 1je8_A           23 TPRERDILK-LIAQGLPNKMIARRLD-ITESTVKVHVKHMLKKMKLKSR   69 (82)
T ss_dssp             CHHHHHHHH-HHTTTCCHHHHHHHHT-SCHHHHHHHHHHHHHHTTCSSH
T ss_pred             CHHHHHHHH-HHHCCCCHHHHHHHHC-CCHHHHHHHHHHHHHHHCCCCH
T ss_conf             999999999-9992899999998979-5999999999999998389999