HHSEARCH alignment of GI: 254780431 and SCOP domain: d1gdta1

Alignment

>d1gdta1 a.4.1.2 (A:141-183) gamma,delta resolvase (C-terminal domain) {Escherichia coli [TaxId: 562]}

Probab=97.00  E-value=0.00029  Score=46.68  Aligned_cols=28  Identities=32%  Similarity=0.676  Sum_probs=25.2

Q ss_pred             HHHHHHHHHCCCCHHHHHHHHCCCCHHHH
Q ss_conf             99999999818658899999678543466
Q gi|254780431|r    8 IDKLKKFWSEGLSASQIAVQLGGVTRNAV   36 (178)
Q Consensus         8 ve~LkkLW~eG~SasqIA~~lGgvtRNAV   36 (178)
                      ++..++|+.+|+++++||++|| ++|..|
T Consensus         8 ~~~V~~L~~~G~gat~IAk~lg-I~R~SV   35 (43)
T d1gdta1           8 RDAVLNMWQQGLGASHISKTMN-IARSTV   35 (43)
T ss_dssp             HHHHHHHHHTTCCHHHHHHHHT-CCHHHH
T ss_pred             HHHHHHHHHCCCCHHHHHHHHC-CCHHHH
T ss_conf             9999999994898999999979-879999

SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Recombinase DNA-binding domain
domain: gamma,delta resolvase (C-terminal domain)
species: Escherichia coli [TaxId: 562]