HHsearch alignment for GI: 254780432 and conserved domain: COG0520
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].
Probab=99.47 E-value=2e-11 Score=95.15 Aligned_cols=330 Identities=15% Similarity=0.175 Sum_probs=192.1
Q ss_pred CCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHC-CCCCC-CCCCHH----HHHHHHHHH-HHCC---CCCCCCCCCCCC
Q ss_conf 9764641022674357878999999999999731-45068-757818----999998652-0101---333123565554
Q gi|254780432|r 31 GIPFLDFASGIAVNSLGHSHPELVAILKSQSEKL-WHVSN-LYQSTQ----QEIFANHLI-HSTF---ADRVFFTNSGAE 100 (392)
Q Consensus 31 G~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~-~~~~~-~~~~~~----~~~la~~L~-~~~~---~~~v~f~~SGse 100 (392)
T Consensus 22 ~~vylD~aa------~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~ 95 (405)
T COG0520 22 PLVYLDNAA------TSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTE 95 (405)
T ss_pred CCEECCCCC------CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHH
T ss_conf 847636765------66678899999999999740245755441279999999999999999819998772999598379
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 03567776654320013478600234354656543212345532113479998643332221002688754101233222
Q gi|254780432|r 101 SVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAI 180 (392)
Q Consensus 101 A~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAav 180 (392)
T Consensus 96 aln~va~~---l~~~-~~~g-deIv~s~~EH~sn~~pw~~~~~----~~Ga~v~~i~~~~~g~~~~d~~~~~i~~~Tklv 166 (405)
T COG0520 96 ALNLVARG---LGRS-LKPG-DEIVVSDLEHHSNIVPWQELAK----RTGAKVRVIPLDDDGLLDLDALEKLITPKTKLV 166 (405)
T ss_pred HHHHHHHH---HHHH-HCCC-CEEEEECCCCCCCHHHHHHHHH----HCCCEEEEEECCCCCCCCHHHHHHHCCCCCEEE
T ss_conf 99999997---0241-0689-9899804655200899999998----759689998418999728899986469994499
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC---CCCEEECC--CCCCCCCCCCC
Q ss_conf 23332222112462101232211022345721310110034444555310111245---45302103--44444434432
Q gi|254780432|r 181 LIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANV---KPDIMTIA--KGMGGGFPIGA 255 (392)
Q Consensus 181 i~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi---~PDi~~~g--K~l~gG~P~sa 255 (392)
T Consensus 167 ais~vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq~~--------~h~~idv~~l~~Df~afsgHKwl~gP~GiGv 234 (405)
T COG0520 167 ALSHVSNVTGTVNP----VKEIAELAHEHGALVLVDAAQAA--------GHLPIDVQELGCDFLAFSGHKWLLGPTGIGV 234 (405)
T ss_pred EEECCCCCCCCCCC----HHHHHHHHHHCCCEEEEECCCCC--------CCCCCCHHHCCCCEEEECCCCCCCCCCCEEE
T ss_conf 99664167554040----99999999984998999771334--------7566885561898999767432579985299
Q ss_pred CCCCCCCCCCCCCCCC------------CCCCC--------CC--CCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH
Q ss_conf 1000111222223322------------34532--------11--11001233455432012221011210000268899
Q gi|254780432|r 256 CLATNEVAACMNQGSH------------GSTYG--------GN--VLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLT 313 (392)
Q Consensus 256 v~~~~~i~~~~~~~~~------------~~T~~--------gn--pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~ 313 (392)
T Consensus 235 Ly~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig-~~~i~~~e~~L~~~~~ 313 (405)
T COG0520 235 LYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIG-MEAIEAHERELTEYLL 313 (405)
T ss_pred EEECHHHHHHCCCCCCCCCCEEECCCCCCCEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_conf 998665584378977788724401445553015641531557843788986999999999857-9999999999999999
Q ss_pred HHHHHCCCE--EEEEC-CCEEEEEEEECC-CHHHHHHHHHHCCEEEEECCC------------CEEEECCCCCCCHHHHH
Q ss_conf 998867970--75504-640099987249-989999999968989962689------------88995589868899999
Q gi|254780432|r 314 AIKNRFPNM--FLEVR-GQGLLIGLKTVF-SPALLAAKFRDECLLTAPSSD------------NVVRILPPLTITAEEIH 377 (392)
Q Consensus 314 ~l~~~~~~~--v~~vR-G~Gl~~~ie~~~-~~~~~~~~l~~~Gll~~~~~~------------~~irl~Ppl~it~~eid 377 (392)
T Consensus 314 ~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid 393 (405)
T COG0520 314 EGLSELPGVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVD 393 (405)
T ss_pred HHHHCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCCEEEEEECCCCHHHHH
T ss_conf 99854898499646634677469999789598999999986786998256443267875377775799974259999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254780432|r 378 EGLERIERTAI 388 (392)
Q Consensus 378 ~~i~~l~~al~ 388 (392)
T Consensus 394 ~l~~aL~~~~~ 404 (405)
T COG0520 394 RLLEALKKALA 404 (405)
T ss_pred HHHHHHHHHHC
T ss_conf 99999998741