HHsearch alignment for GI: 254780432 and conserved domain: COG1003
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism].
Probab=98.60 E-value=3.8e-06 Score=60.67 Aligned_cols=290 Identities=18% Similarity=0.259 Sum_probs=178.2
Q ss_pred HHHHHHHHHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999986520101333123-5655540356777665432001347860023435465654321234553211347999864
Q gi|254780432|r 77 EIFANHLIHSTFADRVFF-TNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKI 155 (392)
Q Consensus 77 ~~la~~L~~~~~~~~v~f-~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~ 155 (392)
T Consensus 112 ~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LI-P~SAHGTNPASAam~G~~VV-------~ 183 (496)
T COG1003 112 YELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLI-PDSAHGTNPASAAMAGFKVV-------V 183 (496)
T ss_pred HHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE-ECCCCCCCHHHHHHCCCEEE-------E
T ss_conf 999999997409762640678776415678999999999758877767983-16556898656765485599-------9
Q ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCC----CCCCCCCCCCCC
Q ss_conf 333222100268875410123322223-332222112462101232211022345721310110----034444555310
Q gi|254780432|r 156 EGFDQAKFCDLQSLKNQISNDTAAILI-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEV----QTGYGRTGKLFA 230 (392)
Q Consensus 156 ~~~~~~~~~d~~~l~~~~~~~iAavi~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV----~tG~GRtG~~f~ 230 (392)
T Consensus 184 V~~~~~G~VDlddLk~k~~~~~AalMiTnP--sT~GvFE---~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~-G 257 (496)
T COG1003 184 VKCDENGNVDLDDLRAKAEDNLAALMITNP--STLGVFE---EDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDM-G 257 (496)
T ss_pred EECCCCCCCCHHHHHHHHCCCEEEEEECCC--CCCCCCH---HHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCCC-C
T ss_conf 832898871699999874131158886168--6454504---519999999997299898447543525225566556-5
Q ss_pred CC--CCCCCCCEEECCCCCCCCCC-CCCCCCCCCCCCCCCC-------------------CCCCCCCCCCCCCHHHHHHH
Q ss_conf 11--12454530210344444434-4321000111222223-------------------32234532111100123345
Q gi|254780432|r 231 YE--WANVKPDIMTIAKGMGGGFP-IGACLATNEVAACMNQ-------------------GSHGSTYGGNVLAMVLGEKV 288 (392)
Q Consensus 231 ~e--~~gi~PDi~~~gK~l~gG~P-~sav~~~~~i~~~~~~-------------------~~~~~T~~gnpl~~aaa~a~ 288 (392)
T Consensus 258 ~DV~HlNLH---KTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~Y 334 (496)
T COG1003 258 FDVVHLNLH---KTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAY 334 (496)
T ss_pred CCEEEEECC---CCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHH
T ss_conf 635775223---11025888899987760258551233898733477753003678776422651455761689999999
Q ss_pred HHHHHCCCCCC---HHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC-----------HHHHHHHHHHCCEE
Q ss_conf 54320122210---11210000268899998867970755046400999872499-----------89999999968989
Q gi|254780432|r 289 LNIIQSDGFLE---NVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS-----------PALLAAKFRDECLL 354 (392)
Q Consensus 289 L~~l~~~~l~~---~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~-----------~~~~~~~l~~~Gll 354 (392)
T Consensus 335 I~~mG~~GL~~ase~AvLNANYia~rL~~---~y~~~---y~~~~-~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfH 407 (496)
T COG1003 335 IRMMGADGLKQASEVAVLNANYIARRLKG---YYPVP---YTGEN-RVAHECILDARPLKKETGVRALDVAKRLLDYGFH 407 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCC---CCCCC-CCEEEEEEECHHHHHHCCCCHHHHHHHHHHCCCC
T ss_conf 99875778889899999847999997540---27555---47887-6115899605666764298389999998725888
Q ss_pred E----EEC-CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9----626-89889955898688999999999999999985
Q gi|254780432|r 355 T----APS-SDNVVRILPPLTITAEEIHEGLERIERTAIKL 390 (392)
Q Consensus 355 ~----~~~-~~~~irl~Ppl~it~~eid~~i~~l~~al~~L 390 (392)
T Consensus 408 aPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea 448 (496)
T COG1003 408 APTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEA 448 (496)
T ss_pred CCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 87465753356504535777768899999999999999998