HHsearch alignment for GI: 254780432 and conserved domain: COG1003

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism].
Probab=98.60  E-value=3.8e-06  Score=60.67  Aligned_cols=290  Identities=18%  Similarity=0.259  Sum_probs=178.2

Q ss_pred             HHHHHHHHHHCCCCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             999986520101333123-5655540356777665432001347860023435465654321234553211347999864
Q gi|254780432|r   77 EIFANHLIHSTFADRVFF-TNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKI  155 (392)
Q Consensus        77 ~~la~~L~~~~~~~~v~f-~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~  155 (392)
T Consensus       112 ~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LI-P~SAHGTNPASAam~G~~VV-------~  183 (496)
T COG1003         112 YELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLI-PDSAHGTNPASAAMAGFKVV-------V  183 (496)
T ss_pred             HHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE-ECCCCCCCHHHHHHCCCEEE-------E
T ss_conf             999999997409762640678776415678999999999758877767983-16556898656765485599-------9


Q ss_pred             CCCCCCCCHHHHHHHHHCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCC----CCCCCCCCCCCC
Q ss_conf             333222100268875410123322223-332222112462101232211022345721310110----034444555310
Q gi|254780432|r  156 EGFDQAKFCDLQSLKNQISNDTAAILI-EPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEV----QTGYGRTGKLFA  230 (392)
Q Consensus       156 ~~~~~~~~~d~~~l~~~~~~~iAavi~-Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV----~tG~GRtG~~f~  230 (392)
T Consensus       184 V~~~~~G~VDlddLk~k~~~~~AalMiTnP--sT~GvFE---~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~-G  257 (496)
T COG1003         184 VKCDENGNVDLDDLRAKAEDNLAALMITNP--STLGVFE---EDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDM-G  257 (496)
T ss_pred             EECCCCCCCCHHHHHHHHCCCEEEEEECCC--CCCCCCH---HHHHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCCC-C
T ss_conf             832898871699999874131158886168--6454504---519999999997299898447543525225566556-5


Q ss_pred             CC--CCCCCCCEEECCCCCCCCCC-CCCCCCCCCCCCCCCC-------------------CCCCCCCCCCCCCHHHHHHH
Q ss_conf             11--12454530210344444434-4321000111222223-------------------32234532111100123345
Q gi|254780432|r  231 YE--WANVKPDIMTIAKGMGGGFP-IGACLATNEVAACMNQ-------------------GSHGSTYGGNVLAMVLGEKV  288 (392)
Q Consensus       231 ~e--~~gi~PDi~~~gK~l~gG~P-~sav~~~~~i~~~~~~-------------------~~~~~T~~gnpl~~aaa~a~  288 (392)
T Consensus       258 ~DV~HlNLH---KTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~Y  334 (496)
T COG1003         258 FDVVHLNLH---KTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAY  334 (496)
T ss_pred             CCEEEEECC---CCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHH
T ss_conf             635775223---11025888899987760258551233898733477753003678776422651455761689999999


Q ss_pred             HHHHHCCCCCC---HHHHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCC-----------HHHHHHHHHHCCEE
Q ss_conf             54320122210---11210000268899998867970755046400999872499-----------89999999968989
Q gi|254780432|r  289 LNIIQSDGFLE---NVINIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFS-----------PALLAAKFRDECLL  354 (392)
Q Consensus       289 L~~l~~~~l~~---~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~-----------~~~~~~~l~~~Gll  354 (392)
T Consensus       335 I~~mG~~GL~~ase~AvLNANYia~rL~~---~y~~~---y~~~~-~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfH  407 (496)
T COG1003         335 IRMMGADGLKQASEVAVLNANYIARRLKG---YYPVP---YTGEN-RVAHECILDARPLKKETGVRALDVAKRLLDYGFH  407 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCC---CCCCC-CCEEEEEEECHHHHHHCCCCHHHHHHHHHHCCCC
T ss_conf             99875778889899999847999997540---27555---47887-6115899605666764298389999998725888


Q ss_pred             E----EEC-CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             9----626-89889955898688999999999999999985
Q gi|254780432|r  355 T----APS-SDNVVRILPPLTITAEEIHEGLERIERTAIKL  390 (392)
Q Consensus       355 ~----~~~-~~~~irl~Ppl~it~~eid~~i~~l~~al~~L  390 (392)
T Consensus       408 aPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea  448 (496)
T COG1003         408 APTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEA  448 (496)
T ss_pred             CCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             87465753356504535777768899999999999999998