HHsearch alignment for GI: 254780432 and conserved domain: COG1167
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].
Probab=99.16 E-value=1.8e-09 Score=82.40 Aligned_cols=338 Identities=16% Similarity=0.202 Sum_probs=205.6
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCC-----CCC-CCCCHHHHHHHHHHHHH----CCCCCCCCCCCC
Q ss_conf 79976464102267435787899999999999973145-----068-75781899999865201----013331235655
Q gi|254780432|r 29 ENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWH-----VSN-LYQSTQQEIFANHLIHS----TFADRVFFTNSG 98 (392)
Q Consensus 29 ~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~-----~~~-~~~~~~~~~la~~L~~~----~~~~~v~f~~SG 98 (392)
T Consensus 86 ~~~~~~i~f~~g~p~~~-~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~ 164 (459)
T COG1167 86 EDDPSVIDFAGGLPDPS-LFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGA 164 (459)
T ss_pred CCCCCCCCCCCCCCCCH-HCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEECCCH
T ss_conf 57875547688998810-18889999999999850561233226876888999999999999974998883038980649
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHCCC-C
Q ss_conf 5403567776654320013478600234354656543212345532113479998643332-2210026887541012-3
Q gi|254780432|r 99 AESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFD-QAKFCDLQSLKNQISN-D 176 (392)
Q Consensus 99 seA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~-~~~~~d~~~l~~~~~~-~ 176 (392)
T Consensus 165 q~al~l~~~~l~-------~pG-d~v~vE~PtY~~~~~~~~----------~~g~~~~~vp~d~~G~~~e~le~~~~~~~ 226 (459)
T COG1167 165 QQALDLLLRLLL-------DPG-DTVLVEDPTYPGALQALE----------ALGARVIPVPVDEDGIDPEALEEALAQWK 226 (459)
T ss_pred HHHHHHHHHHHC-------CCC-CEEEECCCCHHHHHHHHH----------HCCCCEEEECCCCCCCCHHHHHHHHHCCC
T ss_conf 999999999847-------999-999989998289999999----------86994786067888989799999985069
Q ss_pred CCCCCCCCC-CCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC-CCCCCCCCCC----EEECCCCCCCC
Q ss_conf 322223332-22211246210123221102234572131011003444455531-0111245453----02103444444
Q gi|254780432|r 177 TAAILIEPI-QGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLF-AYEWANVKPD----IMTIAKGMGGG 250 (392)
Q Consensus 177 iAavi~Epv-~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f-~~e~~gi~PD----i~~~gK~l~gG 250 (392)
T Consensus 227 ~k~~y~~P~~qNPtG~t-ms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld-~~~rViy~gSFSK~l~Pg 304 (459)
T COG1167 227 PKAVYVTPTFQNPTGVT-MSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALD-APGRVIYLGSFSKTLAPG 304 (459)
T ss_pred CCEEEECCCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCHHHHC-CCCCEEEECCCHHHHCCC
T ss_conf 72899788963889874-5999999999999975987998677433215889983457628-999789991326651467
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHH----HHHCCCEEEEE
Q ss_conf 34432100011122222332234532111100123345543201222101121000026889999----88679707550
Q gi|254780432|r 251 FPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAI----KNRFPNMFLEV 326 (392)
Q Consensus 251 ~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l----~~~~~~~v~~v 326 (392)
T Consensus 305 lRlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~---l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~ 381 (459)
T COG1167 305 LRLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAF---LLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWT 381 (459)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 55499972999999999998762569989999999999---972859999999999999999999999997478763772
Q ss_pred CC-CEEEEEEEECC--CHHHHHHHHHHCCEEEEECC---------CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 46-40099987249--98999999996898996268---------98899558986889999999999999999852
Q gi|254780432|r 327 RG-QGLLIGLKTVF--SPALLAAKFRDECLLTAPSS---------DNVVRILPPLTITAEEIHEGLERIERTAIKLS 391 (392)
Q Consensus 327 RG-~Gl~~~ie~~~--~~~~~~~~l~~~Gll~~~~~---------~~~irl~Ppl~it~~eid~~i~~l~~al~~L~ 391 (392)
T Consensus 382 ~p~gG~flwl~l~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~-~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 382 RPEGGLFLWLELPEGIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSS-PSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEECCC-CCHHHHHHHHHHHHHHHHHHH
T ss_conf 6995589999869988889999999986997945886635789889828998898-999999999999999999762