HHsearch alignment for GI: 254780432 and conserved domain: COG1921
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism].
Probab=96.22 E-value=0.026 Score=35.56 Aligned_cols=246 Identities=17% Similarity=0.146 Sum_probs=134.1
Q ss_pred EEEECHHHHHHHCCCCC--CHHHHHHHHHHHHHCCCCC----CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
Q ss_conf 64641022674357878--9999999999997314506----87578189999986520101333123565554035677
Q gi|254780432|r 33 PFLDFASGIAVNSLGHS--HPELVAILKSQSEKLWHVS----NLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAI 106 (392)
Q Consensus 33 ~yiD~~~g~~~~~lGh~--~p~i~~a~~~q~~~~~~~~----~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Ai 106 (392)
T Consensus 21 ~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~ 100 (395)
T COG1921 21 RVINAIGTVLMTNLGRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTL 100 (395)
T ss_pred HHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHH
T ss_conf 66524322100127876679899999999850543035640123135777999999836644033256788289999987
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC--
Q ss_conf 76654320013478600234354---6565432123455321134799986433322210026887541012332222--
Q gi|254780432|r 107 KTARRYHYMAGKTNKFRIVTFEG---AFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL-- 181 (392)
Q Consensus 107 klar~~~~~~g~t~r~~ii~~~~---~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi-- 181 (392)
T Consensus 101 ~a-------l~-~~~EvVis~g~lV~gg~~~v~d~~---------~~aG~~l~EvG~tn~t~~~d~~~AIne~ta~llkV 163 (395)
T COG1921 101 NA-------LA-EGKEVVVSRGELVEGGAFRVPDII---------RLAGAKLVEVGTTNRTHLKDYELAINENTALLLKV 163 (395)
T ss_pred HH-------HC-CCCEEEEECCCCCCCCCCCHHHHH---------HHCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEEE
T ss_conf 63-------20-577179971311568899866799---------97197799815657677888998854587058999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCC-CCCCCCCEEECC--CCCCCCCCCCCCCC
Q ss_conf 333222211246210123221102234572131011003444455531011-124545302103--44444434432100
Q gi|254780432|r 182 IEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYE-WANVKPDIMTIA--KGMGGGFPIGACLA 258 (392)
Q Consensus 182 ~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e-~~gi~PDi~~~g--K~l~gG~P~sav~~ 258 (392)
T Consensus 164 ~s~~~~f~~~l--~---~~~l~~ia~~~~lpvivD~-aSg~-~v~~e~~l~~~la~GaDLV~~SgdKllgG-PqaGii~G 235 (395)
T COG1921 164 HSSNYGFTGML--S---EEELVEIAHEKGLPVIVDL-ASGA-LVDKEPDLREALALGADLVSFSGDKLLGG-PQAGIIVG 235 (395)
T ss_pred EECCCCCCCCC--C---HHHHHHHHHHCCCCEEEEC-CCCC-CCCCCCCHHHHHHCCCCEEEEECCHHCCC-CCCCEEEC
T ss_conf 50366614645--5---9999999987699779966-7763-00355445688860797899754011279-85433742
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC-CCCHHHH
Q ss_conf 01112222233223453211110012334554320122-2101121
Q gi|254780432|r 259 TNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDG-FLENVIN 303 (392)
Q Consensus 259 ~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~-l~~~~~~ 303 (392)
T Consensus 236 kKelI~~lq~~~l~Ralrv~K~tla~l~~aLe~y~~~~~~~~~~~~ 281 (395)
T COG1921 236 KKELIEKLQSHPLKRALRVDKETLAALEAALELYLQPEILGERLRT 281 (395)
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 4999999976213343315827689999999987080134435578