HHsearch alignment for GI: 254780432 and conserved domain: KOG0629
>KOG0629 consensus.
Probab=91.15 E-value=1.3 Score=24.35 Aligned_cols=267 Identities=17% Similarity=0.201 Sum_probs=125.8
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCCC
Q ss_conf 31235655540356777665432001----347860023435465654321234553211347------99986433322
Q gi|254780432|r 91 RVFFTNSGAESVECAIKTARRYHYMA----GKTNKFRIVTFEGAFHGRTLATISAGGKLQYLE------GFGPKIEGFDQ 160 (392)
Q Consensus 91 ~v~f~~SGseA~e~Aiklar~~~~~~----g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~------~~~p~~~~~~~ 160 (392)
T Consensus 161 DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFt--------------SeesHYSi~kaAa~lg~gtd~c~~ 226 (510)
T KOG0629 161 DGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFT--------------SEESHYSIKKAAAFLGLGTDHCIK 226 (510)
T ss_pred CCEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEE--------------CCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 865368840677899988876118424430020388578984--------------242012499999985668750688
Q ss_pred CCCHH-----HHHHHHHCC---CC--C----CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 21002-----688754101---23--3----2222333222211246210123221102234572131011003444455
Q gi|254780432|r 161 AKFCD-----LQSLKNQIS---ND--T----AAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTG 226 (392)
Q Consensus 161 ~~~~d-----~~~l~~~~~---~~--i----Aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG 226 (392)
T Consensus 227 v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GA---FDd----L~~iadiC~k~~lWmHvDAAwGG----g 295 (510)
T KOG0629 227 VKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGA---FDD----LNGIADICEKHKLWMHVDAAWGG----G 295 (510)
T ss_pred ECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEC---CCC----HHHHHHHHHHCCEEEEEECCCCC----C
T ss_conf 325556865669999999988854899759982478666424---586----78899998754879995100055----5
Q ss_pred CCCCCC----CCCCC-CCEEE--CCCCCCCCCCCCCCCCCCCC-CCC---------CCCC-CCCCCCC-CC-CCCHHHHH
Q ss_conf 531011----12454-53021--03444444344321000111-222---------2233-2234532-11-11001233
Q gi|254780432|r 227 KLFAYE----WANVK-PDIMT--IAKGMGGGFPIGACLATNEV-AAC---------MNQG-SHGSTYG-GN-VLAMVLGE 286 (392)
Q Consensus 227 ~~f~~e----~~gi~-PDi~~--~gK~l~gG~P~sav~~~~~i-~~~---------~~~~-~~~~T~~-gn-pl~~aaa~ 286 (392)
T Consensus 296 lLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~ 375 (510)
T KOG0629 296 LLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHV 375 (510)
T ss_pred CCCCHHHHHHCCCCCCCCCEEECHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCCCCCCCHHHCCCCC
T ss_conf 12475557640575325741166788645861245799887778876402002443146856521003563033247654
Q ss_pred HHHH--HHHC----CC---CCCHHHHHCCHHHHHHHHHHHHC------CCEEEEECCCEEEEEEE-------ECCCH---
Q ss_conf 4554--3201----22---21011210000268899998867------97075504640099987-------24998---
Q gi|254780432|r 287 KVLN--IIQS----DG---FLENVINIAKILFEGLTAIKNRF------PNMFLEVRGQGLLIGLK-------TVFSP--- 341 (392)
Q Consensus 287 a~L~--~l~~----~~---l~~~~~~~g~~l~~~L~~l~~~~------~~~v~~vRG~Gl~~~ie-------~~~~~--- 341 (392)
T Consensus 376 D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~-nv----~fw~vp~~lR~~~~~~e~~~r 450 (510)
T KOG0629 376 DVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHV-NV----CFWYVPPSLRGWQENPERDSR 450 (510)
T ss_pred CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCEE-EE----EECCCCHHHCCCCCCCHHHHH
T ss_conf 2999999997325625899999999999999999872656111013787547-87----504586676168646036667
Q ss_pred -----HHHHHHHHHCCEEEEE---CC--CC--EEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf -----9999999968989962---68--98--899558986889999999999999999
Q gi|254780432|r 342 -----ALLAAKFRDECLLTAP---SS--DN--VVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 342 -----~~~~~~l~~~Gll~~~---~~--~~--~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
T Consensus 451 L~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~-a~~~ad~dflldEIerlgq 508 (510)
T KOG0629 451 LVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNP-ALTEADLDFLLDEIERLGQ 508 (510)
T ss_pred HHHHCCHHHHHHHHCCCEEEEECCCCCCCCHHHEECCCC-HHHHHHHHHHHHHHHHHCC
T ss_conf 774070879999754543567543555444131121561-0114658889999987515