HHsearch alignment for GI: 254780432 and conserved domain: PRK07908
>PRK07908 hypothetical protein; Provisional.
Probab=99.28 E-value=2.5e-10 Score=88.03 Aligned_cols=309 Identities=17% Similarity=0.174 Sum_probs=166.1
Q ss_pred CCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH-HHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHH
Q ss_conf 9976464102267435787899999999999973145068757818-9999986520101--333123565554035677
Q gi|254780432|r 30 NGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNLYQSTQ-QEIFANHLIHSTF--ADRVFFTNSGAESVECAI 106 (392)
Q Consensus 30 dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~~~~~~-~~~la~~L~~~~~--~~~v~f~~SGseA~e~Ai 106 (392)
T Consensus 19 ~~pgiidlS~n--~np~gp-p~~v~~al~~a~~~~~----~YP~~~~~~~Lr~aiA~~~gv~~d~I~~gnGs~E~i~~-- 89 (346)
T PRK07908 19 AAPGLLDFAVN--VRADRP-PEWLRERLAARLPDLA----RYPSTEDVRRARAAVAARHGRTRDEVLLLAGAAEGFAL-- 89 (346)
T ss_pred CCCCCEECCCC--CCCCCC-CHHHHHHHHHHCCCCC----CCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHH--
T ss_conf 89997788899--999897-9999999997555466----89398656999999999978588999874379999999--
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC-CCCCC
Q ss_conf 76654320013478600234354656543212345532113479998643332221002688754101233222-23332
Q gi|254780432|r 107 KTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAI-LIEPI 185 (392)
Q Consensus 107 klar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAav-i~Epv 185 (392)
T Consensus 90 -l~~~------~~~~~vi~--~P~f~~y~-~~~~~~g~~v~~v---~l~~~~~l----d~----~ai~~~~~lv~l~nPn 148 (346)
T PRK07908 90 -LARL------LPRRAAVV--HPSFTEPE-AALRAAGIPVHRV---VLDPPFRL----DP----AAVPDDADLVVVGNPT 148 (346)
T ss_pred -HHHH------CCCCEEEE--CCCCHHHH-HHHHHCCCCEEEE---ECCCCCCC----CH----HHCCCCCCEEEECCCC
T ss_conf -9997------48996997--88857999-9999869925995---07986668----96----5767678989979997
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEE---ECCCCCCC-CCCCCCCCCCCC
Q ss_conf 22211246210123221102234572131011003444455531011124545302---10344444-434432100011
Q gi|254780432|r 186 QGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIM---TIAKGMGG-GFPIGACLATNE 261 (392)
Q Consensus 186 ~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~---~~gK~l~g-G~P~sav~~~~~ 261 (392)
T Consensus 149 NPT-G~~-~~~e~l---~~l~~-~~~~lVvDEaY~df~-~~~~~s~~-~~~~~nvivlrSfSK~yglaGlRiGy~va~~~ 220 (346)
T PRK07908 149 NPT-SVL-HPAEQL---LALRR-PGRILVVDEAFADAV-PGEPESLA-GDALPDLLVLRSLTKTWSLAGLRVGYALGAPE 220 (346)
T ss_pred CCC-CCC-CCHHHH---HHHHC-CCCEEEEEHHHHHCC-CCCCHHHH-HHCCCCEEEEECHHHHHCCCHHHHEEEECCHH
T ss_conf 987-786-789999---99853-498999951154325-89713444-42489889992435762577255132116999
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHH--HHHCC-CCCCHHHHHCCHHHHHHHHHHHHCCCEEEEE-CCCEEEEEEEE
Q ss_conf 12222233223453211110012334554--32012-2210112100002688999988679707550-46400999872
Q gi|254780432|r 262 VAACMNQGSHGSTYGGNVLAMVLGEKVLN--IIQSD-GFLENVINIAKILFEGLTAIKNRFPNMFLEV-RGQGLLIGLKT 337 (392)
Q Consensus 262 i~~~~~~~~~~~T~~gnpl~~aaa~a~L~--~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~v-RG~Gl~~~ie~ 337 (392)
T Consensus 221 ~i~~l~~~~~--~~~v~~~a~~a~~a~~~~~~~~~~~~~~~~~~~~R~~l~~~L~~~----g-~-~~~~ps~anF~l~~~ 292 (346)
T PRK07908 221 LLARLTAQRA--HWPLGTLQLEAIAACCAPRAVAEAAADAERLAALRAEMVAGLRAV----G-A-EVVDPGAAPFVLVRV 292 (346)
T ss_pred HHHHHHHHCC--CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC----C-C-EECCCCCEEEEEEEC
T ss_conf 9999998277--888879999999999587568999999999999999999999977----8-8-653899508999868
Q ss_pred CCCHHHHHHHHHHCCEEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 499899999999689899626------898899558986889999999999999999
Q gi|254780432|r 338 VFSPALLAAKFRDECLLTAPS------SDNVVRILPPLTITAEEIHEGLERIERTAI 388 (392)
Q Consensus 338 ~~~~~~~~~~l~~~Gll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~al~ 388 (392)
T Consensus 293 ~-~a~~~~~~L~~~gIlVr~~~~f~gl~~~~iRia---v~~~een~rli~aL~~il~ 345 (346)
T PRK07908 293 P-DAELVRKRLRERGIAVRRGDTFPGLDPDYLRAA---VRPEWPVDRLVQAIAEILR 345 (346)
T ss_pred C-CHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEE---ECCHHHHHHHHHHHHHHHC
T ss_conf 9-999999999808959997887788798989998---3889999999999999974