HHsearch alignment for GI: 254780432 and conserved domain: PRK08637
>PRK08637 hypothetical protein; Provisional.
Probab=98.79 E-value=3.5e-07 Score=67.39 Aligned_cols=281 Identities=12% Similarity=0.120 Sum_probs=143.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCHH-HHHHH
Q ss_conf 2356555403567776654320013478600234354656543212345-532113479998643332221002-68875
Q gi|254780432|r 93 FFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISA-GGKLQYLEGFGPKIEGFDQAKFCD-LQSLK 170 (392)
Q Consensus 93 ~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~-s~~~~~~~~~~p~~~~~~~~~~~d-~~~l~ 170 (392)
T Consensus 73 v~T~Ggt~al~~~~~~~~-------~~gd~-Vlip~P~W~n-y~~i~~~~~G~~v~~y---~~~~~~~~~~~~~~~~~l~ 140 (386)
T PRK08637 73 IVTNALTHGLSLVADLFV-------NQGDT-VLLPDHNWGN-YKLVFNTRNGANLQTY---PIFDKDGHFTTDALVEALQ 140 (386)
T ss_pred EECCCHHHHHHHHHHHHH-------CCCCE-EEEECCCCHH-HHHHHHHHCCCCEEEE---EEECCCCCCCHHHHHHHHH
T ss_conf 875746899999999984-------79998-9991798541-7999998379841677---4264678978199999998
Q ss_pred HHCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHCCCCCC-----CCEEEECCCCCCCCCCCC----CCCCCCCCCCCCE
Q ss_conf 41012332222-3332222112462101232211022345-----721310110034444555----3101112454530
Q gi|254780432|r 171 NQISNDTAAIL-IEPIQGEGGVRKVPEEFLQQLRKICDDI-----DALLIFDEVQTGYGRTGK----LFAYEWANVKPDI 240 (392)
Q Consensus 171 ~~~~~~iAavi-~Epv~g~~G~~~~~~~~l~~l~~lc~~~-----g~llI~DEV~tG~GRtG~----~f~~e~~gi~PDi 240 (392)
T Consensus 141 ~~~~~~~vvll~n~p-hNPTG~-~~t~ee~~~i~~~~~~~~~~g~~i~~i~D~aY~~~~~~~~~~~~~~~-~~~~~~~~~ 217 (386)
T PRK08637 141 AAYNKDKVILILNFP-NNPTGY-TPTHKEVTTIVEAIKALADKGTKVIAVVDDAYYGLFYEDVYKESLFT-ALANLHSNI 217 (386)
T ss_pred HCCCCCCEEEEECCC-CCCCCC-CCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCCHHHH-HHHCCCCCE
T ss_conf 457788389998789-998886-89999999999999987733888899996014566308843224999-862157764
Q ss_pred E-----ECCCCCCC-CCCCCCCC---CCCCCCCCCCCC---CCCCCCCCCCCCHHHHHHHHHHHHCCCC-CCHHHHHCCH
Q ss_conf 2-----10344444-43443210---001112222233---2234532111100123345543201222-1011210000
Q gi|254780432|r 241 M-----TIAKGMGG-GFPIGACL---ATNEVAACMNQG---SHGSTYGGNVLAMVLGEKVLNIIQSDGF-LENVINIAKI 307 (392)
Q Consensus 241 ~-----~~gK~l~g-G~P~sav~---~~~~i~~~~~~~---~~~~T~~gnpl~~aaa~a~L~~l~~~~l-~~~~~~~g~~ 307 (392)
T Consensus 218 ~~i~~~s~SK~~~myG~RvG~l~~~~~~~~~~~~~~~~~~~~~r~~~Snpp-~-~gq~~~~~~L~~~~~~~~e~~e~~~~ 295 (386)
T PRK08637 218 LAVKLDGATKEFFAWGFRVGFITFGTSDQTTKEVLEAKVKGLIRSNISSGP-H-PSQSAVLHVLKNPDQFDKEIEQKIQI 295 (386)
T ss_pred EEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCC-H-HHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 899961310125570023157886059899999999999999860448856-8-99999999975908899999999999
Q ss_pred HHHHHHHH----HHHCCCE--EEEECCCEEEEEEEECC-CHHHHHHHHHH-CCEEEEECCCCEEEECCCCCCCHHHHHHH
Q ss_conf 26889999----8867970--75504640099987249-98999999996-89899626898899558986889999999
Q gi|254780432|r 308 LFEGLTAI----KNRFPNM--FLEVRGQGLLIGLKTVF-SPALLAAKFRD-ECLLTAPSSDNVVRILPPLTITAEEIHEG 379 (392)
Q Consensus 308 l~~~L~~l----~~~~~~~--v~~vRG~Gl~~~ie~~~-~~~~~~~~l~~-~Gll~~~~~~~~irl~Ppl~it~~eid~~ 379 (392)
T Consensus 296 m~~R~~~~~~~l~~~~~~~~~~~~p~~~G~F~~i~~~~~~~e~l~~~Lle~~~V~~v~~g~~~iRIs~a-als~~nI~~~ 374 (386)
T PRK08637 296 LKERYEVTKEVVYDDQYDDHWQAYPFNSGYFMCLKLKDVDAEELRVHLLEKYGIGVIALNETDLRIAFS-CVEEEDIPHV 374 (386)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEEEE-ECCHHHHHHH
T ss_conf 999999999997420435686324567615886479989999999999863958999559997799998-5889999999
Q ss_pred HHHHHHHHHHHC
Q ss_conf 999999999852
Q gi|254780432|r 380 LERIERTAIKLS 391 (392)
Q Consensus 380 i~~l~~al~~L~ 391 (392)
T Consensus 375 ~~~I~~al~~Lk 386 (386)
T PRK08637 375 FDSIAKAIDDLR 386 (386)
T ss_pred HHHHHHHHHHCC
T ss_conf 999999998539