HHsearch alignment for GI: 254780432 and conserved domain: TIGR00508
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase; InterPro: IPR005815 All members of the seed alignment have been demonstrated experimentally to act as (2.6.1.62 from EC), an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae. ; GO: 0004015 adenosylmethionine-8-amino-7-oxononanoate transaminase activity, 0009102 biotin biosynthetic process.
Probab=100.00 E-value=0 Score=333.20 Aligned_cols=386 Identities=29% Similarity=0.450 Sum_probs=325.2
Q ss_pred CCCEECCCCCC----CCE-EEEEECCCEEEECCCC----EEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCC
Q ss_conf 43145155888----874-8985010379967997----6464102267435787899999999999973145068-757
Q gi|254780432|r 3 KNDFLFNTYDQ----SDI-RFEKGKGAWLFSENGI----PFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSN-LYQ 72 (392)
Q Consensus 3 ~~~~~~~~~~~----~p~-~i~~a~G~~i~d~dG~----~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~-~~~ 72 (392)
T Consensus 11 d~~~~w~p~~~~~~~~~~~~~~~~~g~~~~~~~g~p~~~~~~d~~~~ww~~~~g~~~p~~~~~~~~~~~~~~~~~~gg~~ 90 (466)
T TIGR00508 11 DKRHIWHPYTSLSSPLPLYPVESADGVELTLEDGRPVDVRLIDGLSSWWAAIHGYNHPRLNAAAQKQLDKLSHVLFGGLT 90 (466)
T ss_pred HHHHCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 12211343222467643200003564168863788420333211013455440577524567888878765555523544
Q ss_pred CHHHHHHHHHHHHHC--CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 818999998652010--13331235655540356777665432001347860023435465654321234553211347-
Q gi|254780432|r 73 STQQEIFANHLIHST--FADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLE- 149 (392)
Q Consensus 73 ~~~~~~la~~L~~~~--~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~- 149 (392)
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~gd~~~~~~~cdp~~~~~~ 170 (466)
T TIGR00508 91 HEPAVELCRKLLKLTPEPLDCVFLADSGSVAVEVALKLALQYWKGKGEPERTKFLTLRNGYHGDTFGALSVCDPENGLHS 170 (466)
T ss_pred CHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCCCCCCCCCEECCCCCCHHH
T ss_conf 31578999999973463100455305764024667788776542024111321000004545543342110266532123
Q ss_pred ---------CCCCCC---CCCC--CC----CCHH-----HHHHHHHCCCC-CCCCCCCCC-CCCCCCCCCCHHHHHHHHC
Q ss_conf ---------999864---3332--22----1002-----68875410123-322223332-2221124621012322110
Q gi|254780432|r 150 ---------GFGPKI---EGFD--QA----KFCD-----LQSLKNQISND-TAAILIEPI-QGEGGVRKVPEEFLQQLRK 204 (392)
Q Consensus 150 ---------~~~p~~---~~~~--~~----~~~d-----~~~l~~~~~~~-iAavi~Epv-~g~~G~~~~~~~~l~~l~~ 204 (392)
T Consensus 171 ~~~~~~~~~~~~~~p~~~~g~p~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~gg~~~~~p~~~~~~~~ 250 (466)
T TIGR00508 171 LWKGYLPENLFAPAPSIVDGLPTSQVRFDEEWNEEDISPLAKLLELHGDETVAAVILEPIVQGAGGLRFYHPTYLKRVRA 250 (466)
T ss_pred HHCCCCCHHHHCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 32022220221256511115655556776531045677899999852254011233344440457641023789999999
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCCCCCCCCC---------------CCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCC
Q ss_conf 2234572131011003444455531011124---------------5453021034444443-44321000111222223
Q gi|254780432|r 205 ICDDIDALLIFDEVQTGYGRTGKLFAYEWAN---------------VKPDIMTIAKGMGGGF-PIGACLATNEVAACMNQ 268 (392)
Q Consensus 205 lc~~~g~llI~DEV~tG~GRtG~~f~~e~~g---------------i~PDi~~~gK~l~gG~-P~sav~~~~~i~~~~~~ 268 (392)
T Consensus 251 ~~~~~~~~~~~d~~~~g~g~~g~~~~~~~~~~~~~~~g~~p~~~~~~~pd~~c~g~~~~gg~~~~~~~~~~~~~~~~~~~ 330 (466)
T TIGR00508 251 LCKKYGLLLIADEIATGFGRTGKLFACEHAGKYQDQHGISPSDQIKVVPDILCLGKALTGGYLTLSATLTTDKVAETISS 330 (466)
T ss_pred HHHHHHHEEEEHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHCCCCCCCCEEEEHHHHHHHHHHHHCC
T ss_conf 86442010220113203575320110121001001027884322010320221100003430000001223456775406
Q ss_pred C--------CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHC-----CCEEEEECCCEEEEEE
Q ss_conf 3--------22345321111001233455432012221011210000268899998867-----9707550464009998
Q gi|254780432|r 269 G--------SHGSTYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRF-----PNMFLEVRGQGLLIGL 335 (392)
Q Consensus 269 ~--------~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~-----~~~v~~vRG~Gl~~~i 335 (392)
T Consensus 331 ~~~p~~g~~~~gp~~~~~p~~c~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p~~~~~~~g~~g~~~~~~~~~g~~g~~ 410 (466)
T TIGR00508 331 GEGPTGGCFLHGPTFLGNPLACAVAEASLALLLEGPWQKQVSAIESQLKRELSPLRKNPDNGLIGTGVKDVRVLGAIGVV 410 (466)
T ss_pred CCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 77764521321642013324566666678877403046789999888887664321156665201001122222001010
Q ss_pred EEC--CCHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 724--998999999996898996268988995589868899999999999999998
Q gi|254780432|r 336 KTV--FSPALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTAIK 389 (392)
Q Consensus 336 e~~--~~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al~~ 389 (392)
T Consensus 411 ~~~~~~~~~~~~~~~~~~g~w~~p~g-~~~~~~pp~~~~~~~~~~~~~~~~~~~~~ 465 (466)
T TIGR00508 411 ELKEPVNVEELQKGFVEKGVWIRPFG-KLLYLLPPYVITSEELAKLTAALIEALKG 465 (466)
T ss_pred HCCCCCCHHHHHHHHHHCCCEECCCC-CEEEECCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 00123578888778764374121135-36564176200448888999999987505