>TIGR00700 GABAtrnsam 4-aminobutyrate transaminase; InterPro: IPR004632 Eukaryotic 4-aminobutyrate aminotransferase (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between, in either set, the most similar enzyme with a distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known bacterial examples of the enzyme. The best archaeal matches are presumed but not trusted to have the equivalent function. Escherichia coli has two isozymes. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.

Probab=100.00 E-value=0 Score=709.33 Aligned_cols=368 Identities=36% Similarity=0.572 Sum_probs=339.3 Q ss_pred CCEEEEEECCCEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC-CCCHHHHHHHHHHHHHCCC--- Q ss_conf 874898501037996799764641022674357878999999999999731450687-5781899999865201013--- Q gi|254780432|r 14 SDIRFEKGKGAWLFSENGIPFLDFASGIAVNSLGHSHPELVAILKSQSEKLWHVSNL-YQSTQQEIFANHLIHSTFA--- 89 (392) Q Consensus 14 ~p~~i~~a~G~~i~d~dG~~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~~~~~~~~-~~~~~~~~la~~L~~~~~~--- 89 (392) T Consensus 15 ~~~fa~~aega~l~DvdGnr~IDfa~gIavln~GhshP~vV~AV~~Q~~ef~Ht~f~v~pYe~Yv~lAEkln~iaPgSg~ 94 (427) T TIGR00700 15 LRVFAAKAEGAILKDVDGNRYIDFAAGIAVLNVGHSHPKVVEAVKRQVEEFTHTAFQVVPYESYVELAEKLNAIAPGSGE 94 (427) T ss_pred CCEEEEECCCCEEEECCCCEEEHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCCCCCC T ss_conf 51225755884787437752100011023203689873589999999997438853452162589999997157889731 Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCHH--- Q ss_conf 33123565554035677766543200134786002343546565432123455321-13479998643332221002--- Q gi|254780432|r 90 DRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKL-QYLEGFGPKIEGFDQAKFCD--- 165 (392) Q Consensus 90 ~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~-~~~~~~~p~~~~~~~~~~~d--- 165 (392) T Consensus 95 kk~~ffnsGAEAVENAVKIAR~y------TgrpgVvaF~~gfHGRTnmTMalT~Kv~PYK~GFGPFapevY~aP~py~y~ 168 (427) T TIGR00700 95 KKAVFFNSGAEAVENAVKIARKY------TGRPGVVAFDRGFHGRTNMTMALTAKVKPYKIGFGPFAPEVYRAPYPYDYR 168 (427) T ss_pred HHEEEECCCHHHHHHHHHHHHHH------CCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCC T ss_conf 00021115437888899999874------589616863687466126788765227873457888674521168872002 Q ss_pred --------------HHHHHH-------HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCC Q ss_conf --------------688754-------10123322223332222112462101232211022345721310110034444 Q gi|254780432|r 166 --------------LQSLKN-------QISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGR 224 (392) Q Consensus 166 --------------~~~l~~-------~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR 224 (392) T Consensus 169 ~~~~~~q~s~d~m~~~A~~~~f~~dkqv~a~~vAa~v~EPvQGEGGFivp~k~fv~a~~~~C~ehgiVfiADEvQtGFAR 248 (427) T TIGR00700 169 DIALDKQESLDDMVLAAIEALFVADKQVEAENVAAVVIEPVQGEGGFIVPAKEFVAAVLDLCKEHGIVFIADEVQTGFAR 248 (427) T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCH T ss_conf 43344222200389999998312103325010437897322478873338588999999975438758997254568000 Q ss_pred CCCCCCCCCCCC---CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH Q ss_conf 555310111245---45302103444444344321000111222223322345321111001233455432012221011 Q gi|254780432|r 225 TGKLFAYEWANV---KPDIMTIAKGMGGGFPIGACLATNEVAACMNQGSHGSTYGGNVLAMVLGEKVLNIIQSDGFLENV 301 (392) Q Consensus 225 tG~~f~~e~~gi---~PDi~~~gK~l~gG~P~sav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~ 301 (392) T Consensus 249 TG~~FA~eH~~~dGl~PDLit~aKslA~GlPLSgV~GrAeimdApapGgLGGTyaGnPlacAAAlAvl~iIe~egL~ERa 328 (427) T TIGR00700 249 TGKLFAIEHYDDDGLKPDLITVAKSLADGLPLSGVVGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLDIIEEEGLIERA 328 (427) T ss_pred HCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH T ss_conf 02112541006788875188786677356862111044121168888888775568879999999999863113124789 Q ss_pred HHHCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCH----------HHHHHHHHHCCEE--EEECCCCEEEECCCC Q ss_conf 2100002688999988679707550464009998724998----------9999999968989--962689889955898 Q gi|254780432|r 302 INIAKILFEGLTAIKNRFPNMFLEVRGQGLLIGLKTVFSP----------ALLAAKFRDECLL--TAPSSDNVVRILPPL 369 (392) Q Consensus 302 ~~~g~~l~~~L~~l~~~~~~~v~~vRG~Gl~~~ie~~~~~----------~~~~~~l~~~Gll--~~~~~~~~irl~Ppl 369 (392) T Consensus 329 ~qig~~~~d~l~~~k~~~p-~IgdvRglGaMiAvE~vkdp~T~EPda~~a~~ia~~A~a~GlllLTcG~~GNiIRfL~PL 407 (427) T TIGR00700 329 EQIGKLVKDKLIELKEEVP-AIGDVRGLGAMIAVELVKDPDTTEPDAALAEKIAAAALAAGLLLLTCGIYGNIIRFLTPL 407 (427) T ss_pred HHHHHHHHHHHHHHHHHCC-CHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCHHCCHHHHCCCC T ss_conf 9987889888888876067-211120263357888654887888317999999999975682212303011555434886 Q ss_pred CCCHHHHHHHHHHHHHHHH Q ss_conf 6889999999999999999 Q gi|254780432|r 370 TITAEEIHEGLERIERTAI 388 (392) Q Consensus 370 ~it~~eid~~i~~l~~al~ 388 (392) T Consensus 408 tI~D~ll~egl~Il~a~L~ 426 (427) T TIGR00700 408 TISDELLDEGLDILEAALA 426 (427) T ss_pred CCCHHHHHHHHHHHHHHHC T ss_conf 5467889889999999852

HHsearch alignment for GI: 254780432 and conserved domain: TIGR00700