HHsearch alignment for GI: 254780432 and conserved domain: TIGR02006
>TIGR02006 IscS cysteine desulfurase IscS; InterPro: IPR010240 This entry represents cysteine deusulphurase (IscS), one of several cysteine desulphurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulphur cluster assembly.; GO: 0030170 pyridoxal phosphate binding, 0031071 cysteine desulfurase activity, 0006534 cysteine metabolic process.
Probab=97.22 E-value=0.019 Score=36.48 Aligned_cols=332 Identities=20% Similarity=0.230 Sum_probs=177.5
Q ss_pred EEEECHHHHHHHCCCCCCHHHHHHHHHHHHH-CCCCCC-----CCC--CHHHHHHHHHH-HHHCCCC--CCCCCCCCCCC
Q ss_conf 6464102267435787899999999999973-145068-----757--81899999865-2010133--31235655540
Q gi|254780432|r 33 PFLDFASGIAVNSLGHSHPELVAILKSQSEK-LWHVSN-----LYQ--STQQEIFANHL-IHSTFAD--RVFFTNSGAES 101 (392)
Q Consensus 33 ~yiD~~~g~~~~~lGh~~p~i~~a~~~q~~~-~~~~~~-----~~~--~~~~~~la~~L-~~~~~~~--~v~f~~SGseA 101 (392)
T Consensus 5 ~yldy~~t---~---P~~~~v~~~m~~~~~~~g~fGnP~s~sh~fGW~a~~~v~~ar~~~~~~~~~d~~ei~ftsGate~ 78 (404)
T TIGR02006 5 IYLDYAAT---T---PVDKRVAEKMLEYLTEKGNFGNPASRSHKFGWEAEEAVENARNEVAELIGADSREIVFTSGATES 78 (404)
T ss_pred EEEECCCC---C---CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
T ss_conf 36401356---8---64589999999988741566886423433453068899999999999845887407872377530
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 35677766543200134786002343546565432123455321134799986433322210026887541012332222
Q gi|254780432|r 102 VECAIKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAIL 181 (392)
Q Consensus 102 ~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi 181 (392)
T Consensus 79 ~nl~i~G~a~fy~~----k~~h~it~~~-ehk~vl~~~----r~le~~G~~vtyl~~~~~G~~~~~~l~~~~~~~t~lvs 149 (404)
T TIGR02006 79 DNLAIKGVAKFYKS----KGKHIITSKT-EHKAVLDTC----RELEREGFEVTYLEVKEDGLIDLEELKAAIRDDTILVS 149 (404)
T ss_pred HHHHHHHHHHHHHC----CCCEEEEEEH-HHHHHHHHH----HHHHHCCCEEEEEECCCCCCEEHHHHHHHHHCCEEEEE
T ss_conf 24788889999742----3766786400-367899999----98875781689850145662108999987412705787
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC-CCCCCCCCCC
Q ss_conf 333222211246210123221102234572131011003444455531011124545302103444444-3443210001
Q gi|254780432|r 182 IEPIQGEGGVRKVPEEFLQQLRKICDDIDALLIFDEVQTGYGRTGKLFAYEWANVKPDIMTIAKGMGGG-FPIGACLATN 260 (392)
Q Consensus 182 ~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~gK~l~gG-~P~sav~~~~ 260 (392)
T Consensus 150 ~m~vnne~G~~~~----~~~i~~~~r~~~~~fh~d~~q~-~Gk~----~~~~~~~~~dl~s~s~hk~yGPkGiGalyv~~ 220 (404)
T TIGR02006 150 VMAVNNEIGVIQD----IAAIGELCRERKVLFHVDAAQS-VGKI----PIDVEELKVDLMSISGHKIYGPKGIGALYVRR 220 (404)
T ss_pred EEEECCCCCHHHH----HHHHHHHHHHCCEEEEEECCCC-CCCE----EEEHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
T ss_conf 5531144330465----8899987630441476400013-4511----34353431012100123102675521245512
Q ss_pred CCCCCCCC---------CCCCCCCCCCC-CCHHHHHH-HHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 11222223---------32234532111-10012334-554320122210112100002688999988679707550464
Q gi|254780432|r 261 EVAACMNQ---------GSHGSTYGGNV-LAMVLGEK-VLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQ 329 (392)
Q Consensus 261 ~i~~~~~~---------~~~~~T~~gnp-l~~aaa~a-~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~ 329 (392)
T Consensus 221 ~Prvr~~~~~~GGG~erG~r~Gtl~~~~ivG~G~~~~~a~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~n~~~~~~~~ 298 (404)
T TIGR02006 221 KPRVRLEALIHGGGHERGMRSGTLPTHQIVGLGEAFRIAKEELAKDT--ARVLKLRDRLLNGIESIEEVYLNGDLEQRVK 298 (404)
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 77335520004887435410244320143210167899999998889--9999999999998744565331211443112
Q ss_pred E-EEEEEEECCCHHHHH---------------------HHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 0-099987249989999---------------------999968989962689889955898688999999999999999
Q gi|254780432|r 330 G-LLIGLKTVFSPALLA---------------------AKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLERIERTA 387 (392)
Q Consensus 330 G-l~~~ie~~~~~~~~~---------------------~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~l~~al 387 (392)
T Consensus 299 ~~ln~sf~~veGesl~~a~~~~avssGsaCts~slePsyvlr~lG~~~ela-h~s~r~~~Gr~tt~~e~~~~~~~v~~~~ 377 (404)
T TIGR02006 299 GNLNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELA-HSSIRFTLGRFTTEEEIDYAVKLVKSAV 377 (404)
T ss_pred HHHEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 221012220020478888888753056410013353557887606420122-3222100111210789999999999999
Q ss_pred HHHC
Q ss_conf 9852
Q gi|254780432|r 388 IKLS 391 (392)
Q Consensus 388 ~~L~ 391 (392)
T Consensus 378 ~~lr 381 (404)
T TIGR02006 378 DKLR 381 (404)
T ss_pred HHHH
T ss_conf 9886