HHsearch alignment for GI: 254780432 and conserved domain: cd00609

>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.61  E-value=6.9e-14  Score=111.25  Aligned_cols=315  Identities=18%  Similarity=0.216  Sum_probs=179.6

Q ss_pred             CHHHHHHHHHHHHH---CCCCCCCCCCHHHHHHHHHHHHHC----CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             99999999999973---145068757818999998652010----13331235655540356777665432001347860
Q gi|254780432|r   50 HPELVAILKSQSEK---LWHVSNLYQSTQQEIFANHLIHST----FADRVFFTNSGAESVECAIKTARRYHYMAGKTNKF  122 (392)
Q Consensus        50 ~p~i~~a~~~q~~~---~~~~~~~~~~~~~~~la~~L~~~~----~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~  122 (392)
T Consensus        13 ~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-------~~g-d   84 (350)
T cd00609          13 PPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL-------NPG-D   84 (350)
T ss_pred             CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEECCHHHHHHHHHHHHC-------CCC-C
T ss_conf             99999999999747467587999881999999999987873899747978992699999999999980-------898-9


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             02343546565432123455321134799986433322210026887541012332222333222211246210123221
Q gi|254780432|r  123 RIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQL  202 (392)
Q Consensus       123 ~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l  202 (392)
T Consensus        85 ~vlv~~P~y~~~~~~~~~~-g~~~~---~v~~~~--~~~~~~~~~~~~~~~~~~~~~v~l~~P~NPtG~-~~~~~~l~~l  157 (350)
T cd00609          85 EVLVPDPTYPGYEAAARLA-GAEVV---PVPLDE--EGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGA-VLSEEELEEL  157 (350)
T ss_pred             EEEEECCCCCHHHHHHHHC-CCCCC---CCCCCC--CCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCC-CCCHHHHHHH
T ss_conf             8999479863069999982-99412---556560--038676689999856889978985699497254-6337889899


Q ss_pred             HCCCCCCCCEEEECCCCCCCCCCCCCCCC-CCCCCCCC--E--EECCCCCC-CCCCCCCCCCCCC-CCCCCCCCCCCCCC
Q ss_conf             10223457213101100344445553101-11245453--0--21034444-4434432100011-12222233223453
Q gi|254780432|r  203 RKICDDIDALLIFDEVQTGYGRTGKLFAY-EWANVKPD--I--MTIAKGMG-GGFPIGACLATNE-VAACMNQGSHGSTY  275 (392)
Q Consensus       203 ~~lc~~~g~llI~DEV~tG~GRtG~~f~~-e~~gi~PD--i--~~~gK~l~-gG~P~sav~~~~~-i~~~~~~~~~~~T~  275 (392)
T Consensus       158 ~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~~~~  236 (350)
T cd00609         158 AELAKKHGILIISDEAYAELVYDGEPPPALALLD-AYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTS  236 (350)
T ss_pred             HHHHHHCCCEEEEECCCHHHCCCCCCCCHHHHCC-CCCEEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCC
T ss_conf             9998623862688534122036998889678557-798089991172303794537799998889999999862421467


Q ss_pred             CCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEEC-CCEEEEEEEECC--CHHHHHHHHHHCC
Q ss_conf             2111100123345543201222101121000026889999886797075504-640099987249--9899999999689
Q gi|254780432|r  276 GGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVR-GQGLLIGLKTVF--SPALLAAKFRDEC  352 (392)
Q Consensus       276 ~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vR-G~Gl~~~ie~~~--~~~~~~~~l~~~G  352 (392)
T Consensus       237 ~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~p~~g~f~~~~~~~~~~~~~~~~~l~~~g  313 (350)
T cd00609         237 GPSTLSQAAAAAALDDG--EEHLEELRERYRRRRDALLEALKELGPLV-VVKPSGGFFLWLDLPEGDDEEFLERLLLEAG  313 (350)
T ss_pred             CCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCE-EECCCCCEEEEEECCCCCHHHHHHHHHHHCC
T ss_conf             89879999999998682--99999999999999999999998579961-2079955399898999982999999999799


Q ss_pred             EEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf             899626------898899558986889999999999999
Q gi|254780432|r  353 LLTAPS------SDNVVRILPPLTITAEEIHEGLERIER  385 (392)
Q Consensus       353 ll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~  385 (392)
T Consensus       314 v~v~~g~~f~~~~~~~iRl~--~~~~~~~~~~~~~rl~~  350 (350)
T cd00609         314 VVVRPGSAFGEGGEGFVRLS--FATPEEELEEALERLAE  350 (350)
T ss_pred             EEEEECHHHCCCCCCEEEEE--ECCCHHHHHHHHHHHCC
T ss_conf             99992456488998979999--63989999999998578