HHsearch alignment for GI: 254780432 and conserved domain: cd00609
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.61 E-value=6.9e-14 Score=111.25 Aligned_cols=315 Identities=18% Similarity=0.216 Sum_probs=179.6
Q ss_pred CHHHHHHHHHHHHH---CCCCCCCCCCHHHHHHHHHHHHHC----CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999999973---145068757818999998652010----13331235655540356777665432001347860
Q gi|254780432|r 50 HPELVAILKSQSEK---LWHVSNLYQSTQQEIFANHLIHST----FADRVFFTNSGAESVECAIKTARRYHYMAGKTNKF 122 (392)
Q Consensus 50 ~p~i~~a~~~q~~~---~~~~~~~~~~~~~~~la~~L~~~~----~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~ 122 (392)
T Consensus 13 ~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-------~~g-d 84 (350)
T cd00609 13 PPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL-------NPG-D 84 (350)
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEECCHHHHHHHHHHHHC-------CCC-C
T ss_conf 99999999999747467587999881999999999987873899747978992699999999999980-------898-9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 02343546565432123455321134799986433322210026887541012332222333222211246210123221
Q gi|254780432|r 123 RIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQL 202 (392)
Q Consensus 123 ~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l 202 (392)
T Consensus 85 ~vlv~~P~y~~~~~~~~~~-g~~~~---~v~~~~--~~~~~~~~~~~~~~~~~~~~~v~l~~P~NPtG~-~~~~~~l~~l 157 (350)
T cd00609 85 EVLVPDPTYPGYEAAARLA-GAEVV---PVPLDE--EGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGA-VLSEEELEEL 157 (350)
T ss_pred EEEEECCCCCHHHHHHHHC-CCCCC---CCCCCC--CCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCC-CCCHHHHHHH
T ss_conf 8999479863069999982-99412---556560--038676689999856889978985699497254-6337889899
Q ss_pred HCCCCCCCCEEEECCCCCCCCCCCCCCCC-CCCCCCCC--E--EECCCCCC-CCCCCCCCCCCCC-CCCCCCCCCCCCCC
Q ss_conf 10223457213101100344445553101-11245453--0--21034444-4434432100011-12222233223453
Q gi|254780432|r 203 RKICDDIDALLIFDEVQTGYGRTGKLFAY-EWANVKPD--I--MTIAKGMG-GGFPIGACLATNE-VAACMNQGSHGSTY 275 (392)
Q Consensus 203 ~~lc~~~g~llI~DEV~tG~GRtG~~f~~-e~~gi~PD--i--~~~gK~l~-gG~P~sav~~~~~-i~~~~~~~~~~~T~ 275 (392)
T Consensus 158 ~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~~~~ 236 (350)
T cd00609 158 AELAKKHGILIISDEAYAELVYDGEPPPALALLD-AYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTS 236 (350)
T ss_pred HHHHHHCCCEEEEECCCHHHCCCCCCCCHHHHCC-CCCEEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCC
T ss_conf 9998623862688534122036998889678557-798089991172303794537799998889999999862421467
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEEC-CCEEEEEEEECC--CHHHHHHHHHHCC
Q ss_conf 2111100123345543201222101121000026889999886797075504-640099987249--9899999999689
Q gi|254780432|r 276 GGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVR-GQGLLIGLKTVF--SPALLAAKFRDEC 352 (392)
Q Consensus 276 ~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vR-G~Gl~~~ie~~~--~~~~~~~~l~~~G 352 (392)
T Consensus 237 ~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~p~~g~f~~~~~~~~~~~~~~~~~l~~~g 313 (350)
T cd00609 237 GPSTLSQAAAAAALDDG--EEHLEELRERYRRRRDALLEALKELGPLV-VVKPSGGFFLWLDLPEGDDEEFLERLLLEAG 313 (350)
T ss_pred CCCHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCE-EECCCCCEEEEEECCCCCHHHHHHHHHHHCC
T ss_conf 89879999999998682--99999999999999999999998579961-2079955399898999982999999999799
Q ss_pred EEEEEC------CCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 899626------898899558986889999999999999
Q gi|254780432|r 353 LLTAPS------SDNVVRILPPLTITAEEIHEGLERIER 385 (392)
Q Consensus 353 ll~~~~------~~~~irl~Ppl~it~~eid~~i~~l~~ 385 (392)
T Consensus 314 v~v~~g~~f~~~~~~~iRl~--~~~~~~~~~~~~~rl~~ 350 (350)
T cd00609 314 VVVRPGSAFGEGGEGFVRLS--FATPEEELEEALERLAE 350 (350)
T ss_pred EEEEECHHHCCCCCCEEEEE--ECCCHHHHHHHHHHHCC
T ss_conf 99992456488998979999--63989999999998578