HHsearch alignment for GI: 254780432 and conserved domain: cd00616

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.10  E-value=1.4e-09  Score=83.08  Aligned_cols=296  Identities=16%  Similarity=0.155  Sum_probs=173.1

Q ss_pred             HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             99999999731450687578189999986520101333123565554035677766543200134786002343546565
Q gi|254780432|r   54 VAILKSQSEKLWHVSNLYQSTQQEIFANHLIHSTFADRVFFTNSGAESVECAIKTARRYHYMAGKTNKFRIVTFEGAFHG  133 (392)
Q Consensus        54 ~~a~~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~v~f~~SGseA~e~Aiklar~~~~~~g~t~r~~ii~~~~~yHG  133 (392)
T Consensus         2 ~~~v~~~l~s~~~----~~G~~v~~fE~~~~~~~g~k~~v~~~sgt~Al~lal~~l~~-------~~gdeVi~p~~t~~a   70 (352)
T cd00616           2 LEAVEEVLDSGWL----TLGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGI-------GPGDEVIVPSFTFVA   70 (352)
T ss_pred             HHHHHHHHHCCCC----CCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCC-------CCCCEEEECCCCCHH
T ss_conf             7899999836997----79876999999999997859399976889999999998697-------883999989976398


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCE
Q ss_conf             432123455321134799986433322210-0268875410123322223332222112462101232211022345721
Q gi|254780432|r  134 RTLATISAGGKLQYLEGFGPKIEGFDQAKF-CDLQSLKNQISNDTAAILIEPIQGEGGVRKVPEEFLQQLRKICDDIDAL  212 (392)
Q Consensus       134 ~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~-~d~~~l~~~~~~~iAavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~l  212 (392)
T Consensus        71 --------t~~ai~~~G~~pv~~Di~~~t~~id~~~l~~~i~~~tkaIi~vh~~G~----~~--d-~~~i~~~~~~~~i~  135 (352)
T cd00616          71 --------TANAILLLGATPVFVDIDPDTYNIDPELIEAAITPRTKAIIPVHLYGN----PA--D-MDAIMAIAKRHGLP  135 (352)
T ss_pred             --------HHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCCC----CC--C-HHHHHHHHHHCCCE
T ss_conf             --------999999859989984077785775889999762868709999689898----66--8-89999999977989


Q ss_pred             EEECCCCCCCCCCCCCCCCCCCCCCCCEEECC----CCCCCCCCCCCCCCCCC-CCCCCCC----C-----------CCC
Q ss_conf             31011003444455531011124545302103----44444434432100011-1222223----3-----------223
Q gi|254780432|r  213 LIFDEVQTGYGRTGKLFAYEWANVKPDIMTIA----KGMGGGFPIGACLATNE-VAACMNQ----G-----------SHG  272 (392)
Q Consensus       213 lI~DEV~tG~GRtG~~f~~e~~gi~PDi~~~g----K~l~gG~P~sav~~~~~-i~~~~~~----~-----------~~~  272 (392)
T Consensus       136 lIeDaA~a-~Gs---~~~~~~~G~~gd~~~fSF~~~K~it~ge-GG~i~tn~~~~~~~~~~lr~~G~~~~~~~~~~~~~G  210 (352)
T cd00616         136 VIEDAAQA-LGA---TYKGRKVGTFGDAGAFSFHPTKNLTTGE-GGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILG  210 (352)
T ss_pred             EEEHHHHH-CCC---CCCCEECCCCCCCCCCCCCCCCCCCCCC-CEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEECC
T ss_conf             98022002-168---3467125664342534478775676777-349996999999999999965966998852467368


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHCCCEEEEECCC-EEEE--EEEEC----CCHHHHH
Q ss_conf             453211110012334554320122210112100002688999988679707550464-0099--98724----9989999
Q gi|254780432|r  273 STYGGNVLAMVLGEKVLNIIQSDGFLENVINIAKILFEGLTAIKNRFPNMFLEVRGQ-GLLI--GLKTV----FSPALLA  345 (392)
Q Consensus       273 ~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~v~~vRG~-Gl~~--~ie~~----~~~~~~~  345 (392)
T Consensus       211 ~N~rmsel~Aaigl~qLk~ld--~~~~~R~~i~~~Y~~~L~~~~~--i~~~~~~~~~~~~~~~~~i~l~~~~~~~R~~l~  286 (352)
T cd00616         211 YNYRLSEIQAAIGLAQLEKLD--EIIARRREIAERYKELLADLPG--IRLPDVPPGVKHSYHLYVIRLDPEAGESRDELI  286 (352)
T ss_pred             CCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHCCCCC--CCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHH
T ss_conf             342258889999999999889--9999999999999998378998--161666999833557999998650210599999


Q ss_pred             HHHHHCCEEEEECC---------------------------CCEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf             99996898996268---------------------------9889955898688999999999999
Q gi|254780432|r  346 AKFRDECLLTAPSS---------------------------DNVVRILPPLTITAEEIHEGLERIE  384 (392)
Q Consensus       346 ~~l~~~Gll~~~~~---------------------------~~~irl~Ppl~it~~eid~~i~~l~  384 (392)
T Consensus       287 ~~L~~~gI~~~~~y~p~~~~~~~~~~~~~~~~~~pna~~i~~~~l~LP~~~~Lt~~di~~I~~~IK  352 (352)
T cd00616         287 EALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR  352 (352)
T ss_pred             HHHHHCCCCEEEECCCHHHCHHHHHHCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHC
T ss_conf             999987998580283333384989725998899989999984979898999879999999999749