HHsearch alignment for GI: 254780432 and conserved domain: pfam02347
>pfam02347 GDC-P Glycine cleavage system P-protein. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is:- Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2
Probab=96.51 E-value=0.054 Score=33.50 Aligned_cols=308 Identities=18% Similarity=0.165 Sum_probs=147.5
Q ss_pred HHHHHHHCCCCCCHHHHH-HHHHHHHHC-CCCCC-CCCCHH-H------HHHHHHHHHHCCCCC--CCCCCCCCCCHHHH
Q ss_conf 022674357878999999-999999731-45068-757818-9------999986520101333--12356555403567
Q gi|254780432|r 38 ASGIAVNSLGHSHPELVA-ILKSQSEKL-WHVSN-LYQSTQ-Q------EIFANHLIHSTFADR--VFFTNSGAESVECA 105 (392)
Q Consensus 38 ~~g~~~~~lGh~~p~i~~-a~~~q~~~~-~~~~~-~~~~~~-~------~~la~~L~~~~~~~~--v~f~~SGseA~e~A 105 (392)
T Consensus 67 ~sfiG~G~y~h~vP~vi~~~i~---~r~efyTaYTPYQpEiSQG~LqalfefQtmi~eLTGmdvaNASlyD~aTA~aEA~ 143 (429)
T pfam02347 67 KSFIGMGYYDTIIPAVILRNIL---ENPEWYTQYTPYQPEISQGRLEALLNFQTMVCDLTGLDVANASLLDEGTAAAEAM 143 (429)
T ss_pred CCCCCCCCCCCCCCCHHHHHHC---CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 6315787779765815646540---4766430369998154437999999999999998588756876666788999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 77665432001347860023435465654321234553211347999864333222100268875410123322223332
Q gi|254780432|r 106 IKTARRYHYMAGKTNKFRIVTFEGAFHGRTLATISAGGKLQYLEGFGPKIEGFDQAKFCDLQSLKNQISNDTAAILIEPI 185 (392)
Q Consensus 106 iklar~~~~~~g~t~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavi~Epv 185 (392)
T Consensus 144 -~ma~r~~----k~~~~~vlv-~~~~hP~~~~Vl~-----T~~~~~~---i~i~~~~~~~---~~~~~~~~~a~v~~q~P 206 (429)
T pfam02347 144 -ALAARIS----KGKKKKFVV-DKDCHPQTLDVLR-----TRAKGFG---IEIVEVDLTE---EGFSDEGDVFGVLVQYP 206 (429)
T ss_pred -HHHHHHH----CCCCCEEEE-ECCCCHHHHHHHH-----HHHHCCC---CEEEEECCCC---CCCCCCCCEEEEEEECC
T ss_conf -9987651----578877998-2887831899999-----7542279---5799967200---14555547689999379
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCCCCCEEEE--CCCCCCCCCCCCCCCCCCCCCCCCEE-----ECCCCCCCCCCCCC-CC
Q ss_conf 222112462101232211022345721310--11003444455531011124545302-----10344444434432-10
Q gi|254780432|r 186 QGEGGVRKVPEEFLQQLRKICDDIDALLIF--DEVQTGYGRTGKLFAYEWANVKPDIM-----TIAKGMGGGFPIGA-CL 257 (392)
Q Consensus 186 ~g~~G~~~~~~~~l~~l~~lc~~~g~llI~--DEV~tG~GRtG~~f~~e~~gi~PDi~-----~~gK~l~gG~P~sa-v~ 257 (392)
T Consensus 207 n~~-G~ied----~~~i~~~~h~~gal~iv~~dplsL~ll~~-----Pg~~G--aDI~vG~~Q~lGipm~fGGP~~gf~a 274 (429)
T pfam02347 207 NTE-GRIED----YKELIEIAHQHGSLVVVAADLLALTILKP-----PGEFG--ADIVVGSAQRFGVPMGYGGPHAGFFA 274 (429)
T ss_pred CCC-CCEEC----CHHHHHHHHHCCCEEEEEECHHHHCCCCC-----CCCCC--CCEEEECCCCCCCCCCCCCCCCCHHH
T ss_conf 998-31723----49999998645966999807799607689-----76566--33797257657888788988200154
Q ss_pred CCCCCCCCCCCCC----------------------C-------CCCCCCCCCCHHHHHHHHHHHHCCC---CCCHHHHHC
Q ss_conf 0011122222332----------------------2-------3453211110012334554320122---210112100
Q gi|254780432|r 258 ATNEVAACMNQGS----------------------H-------GSTYGGNVLAMVLGEKVLNIIQSDG---FLENVINIA 305 (392)
Q Consensus 258 ~~~~i~~~~~~~~----------------------~-------~~T~~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g 305 (392)
T Consensus 275 ~~~~~~R~~PGRivG~t~D~~G~~~~~ltLqtREQHIrReKAtSNICTnqaL~A~~a~~Y~~~~Gp~GL~~iA~~~~~~A 354 (429)
T pfam02347 275 VKEELKRKMPGRIVGVSKDANGKRALRLALQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPKGLKEIARRIHSLT 354 (429)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_conf 48889974997644677588998733654124343033444203465008999999999999869788999999999999
Q ss_pred CHHHHHHHHHHHHCCCEEEEECCCEEEE--EEEECC-CHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCHHHHHHHHHH
Q ss_conf 0026889999886797075504640099--987249-9899999999689899626898899558986889999999999
Q gi|254780432|r 306 KILFEGLTAIKNRFPNMFLEVRGQGLLI--GLKTVF-SPALLAAKFRDECLLTAPSSDNVVRILPPLTITAEEIHEGLER 382 (392)
Q Consensus 306 ~~l~~~L~~l~~~~~~~v~~vRG~Gl~~--~ie~~~-~~~~~~~~l~~~Gll~~~~~~~~irl~Ppl~it~~eid~~i~~ 382 (392)
T Consensus 355 ~yl~~~L~~~----~g-~-~~~~~~Ffd~v~~~~~~~~~~~l~~~~i~~G~~l~~~~~~~~li~vtE~~T~edId~Lv~~ 428 (429)
T pfam02347 355 LYLAKGLKKL----AG-H-ELDHDHFFDTLKITVEDRAAEELLKRAEKGGINLRYVDLGTVGIALDETTTKEDVDALLKV 428 (429)
T ss_pred HHHHHHHHHC----CC-E-ECCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCHHHHHHHHHH
T ss_conf 9999999866----99-7-6679996215999628278999999999779973653899499996479999999999975
Q ss_pred H
Q ss_conf 9
Q gi|254780432|r 383 I 383 (392)
Q Consensus 383 l 383 (392)
T Consensus 429 f 429 (429)
T pfam02347 429 F 429 (429)
T ss_pred C
T ss_conf 9