HHsearch alignment for GI: 254780434 and conserved domain: CHL00162

>CHL00162 thiG thiamin biosynthesis protein G; Validated.
Probab=98.23  E-value=0.00058  Score=46.50  Aligned_cols=215  Identities=18%  Similarity=0.166  Sum_probs=118.7

Q ss_pred             EEEECCEECCCCEEECCCCCCCHHHHH-HHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHH
Q ss_conf             168887335997485346888677988-8740367524102001368789988626884255541000024777778899
Q gi|254780434|r   46 NTKVAGISLSNPLGMAAGYDKNAEVPI-ELLKLGFGFVEIGTVTPHPQAGNPRPRVFRLTKDRAIINKLGFNNAGYHTVF  124 (362)
Q Consensus        46 ~~~~~Gl~~~nPiglAaG~dk~~~~~~-~l~~~G~G~v~~ktit~~p~~GNp~PR~~r~~~~~~iiN~~Gl~N~G~~~~~  124 (362)
T Consensus         7 ~l~I~g~~f~SRLilGTgkY~s~~~~~~ai~aSgaeiV---TVAlR-----------R~~~--------~-~~~~~~~~l   63 (267)
T CHL00162          7 PLKIGNKSFNSRLMLGTGKYRNLEEAINSIEASGCEIV---TVAIR-----------RAQN--------N-KLNGNSSLL   63 (267)
T ss_pred             CEEECCEEEECCEEEECCCCCCHHHHHHHHHHHCCCEE---EEEEE-----------CCCC--------C-CCCCHHHHH
T ss_conf             66999999885327872899999999999999699879---99973-----------2557--------7-888746787


Q ss_pred             HHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHC-----CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             9876410001210001104542467887765554206-----75526983033365322110000234321111224445
Q gi|254780434|r  125 SRLSKIQPTSPIGINLGANKDSKDFILDYVSGIRLFF-----TIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTR  199 (362)
Q Consensus       125 ~~l~~~~~~~pi~vsI~~~~~s~~~~~dy~~~~~~~~-----~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~  199 (362)
T Consensus        64 ~~i~~~~--~~~LPNTAGc~taeEAVr-~A~lAREl~~~~g~~~tnwIKLEV----------i~D~~tLlPD~~etl~Aa  130 (267)
T CHL00162         64 DGLDWNK--LWLLPNTAGCQTAEEAIR-VAFLGRELAKQLGQEDNNFVKLEV----------IPDPKYLLPDPIGTLKAA  130 (267)
T ss_pred             HHCCCCC--EEECCCCCCCCCHHHHHH-HHHHHHHHHHHCCCCCCCEEEEEE----------ECCCCCCCCCHHHHHHHH
T ss_conf             4337024--178566302287999999-999999985301567897799998----------279877798878999999


Q ss_pred             HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             56553126885178650577774888999998764498299980665553234577544632211356454246899999
Q gi|254780434|r  200 EEEKIKTGKFVPIFLKISPDLSEEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAK  279 (362)
Q Consensus       200 ~~~~~~~~~~~Pi~vKLsPd~~~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~  279 (362)
T Consensus       131 e~Lv~eG---F~Vl----pY~~dD--~v~akrLe~~Gc~avMP---------lgsPI-G------Sg~Gl~n--~~~l~~  183 (267)
T CHL00162        131 EFLVRKG---FTVL----PYINAD--PVLAKQLEDIGCATVMP---------LGSPI-G------SGQGLQN--LLNLQI  183 (267)
T ss_pred             HHHHHCC---CEEE----EECCCC--HHHHHHHHHCCCEEEEE---------CCCCC-C------CCCCCCC--HHHHHH
T ss_conf             9999789---9998----954899--89999998659868863---------45512-3------6887589--999999


Q ss_pred             HHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHC-CCHH
Q ss_conf             997408974899967889999999999839997545278770-6978
Q gi|254780434|r  280 IRQRVGPKIAIIGTGGISSTKDALDKIMAGANLIQLYSAMIY-EGIS  325 (362)
Q Consensus       280 i~~~~~~~i~IIg~GGI~s~~Da~e~l~aGAs~VQi~Tali~-~Gp~  325 (362)
T Consensus       184 i~e~--~~vPvIVDAGiG~pSdAa~aMElG~DaVL~NTAIA~A~dPv  228 (267)
T CHL00162        184 IIEN--AKIPVIIDAGIGTPSEASQAMELGASGVLLNTAVAKAKNPE  228 (267)
T ss_pred             HHHC--CCCCEEEECCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHH
T ss_conf             9964--89988996898967888999974677787016767169989