HHsearch alignment for GI: 254780434 and conserved domain: CHL00162
>CHL00162 thiG thiamin biosynthesis protein G; Validated.
Probab=98.23 E-value=0.00058 Score=46.50 Aligned_cols=215 Identities=18% Similarity=0.166 Sum_probs=118.7
Q ss_pred EEEECCEECCCCEEECCCCCCCHHHHH-HHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHH
Q ss_conf 168887335997485346888677988-8740367524102001368789988626884255541000024777778899
Q gi|254780434|r 46 NTKVAGISLSNPLGMAAGYDKNAEVPI-ELLKLGFGFVEIGTVTPHPQAGNPRPRVFRLTKDRAIINKLGFNNAGYHTVF 124 (362)
Q Consensus 46 ~~~~~Gl~~~nPiglAaG~dk~~~~~~-~l~~~G~G~v~~ktit~~p~~GNp~PR~~r~~~~~~iiN~~Gl~N~G~~~~~ 124 (362)
T Consensus 7 ~l~I~g~~f~SRLilGTgkY~s~~~~~~ai~aSgaeiV---TVAlR-----------R~~~--------~-~~~~~~~~l 63 (267)
T CHL00162 7 PLKIGNKSFNSRLMLGTGKYRNLEEAINSIEASGCEIV---TVAIR-----------RAQN--------N-KLNGNSSLL 63 (267)
T ss_pred CEEECCEEEECCEEEECCCCCCHHHHHHHHHHHCCCEE---EEEEE-----------CCCC--------C-CCCCHHHHH
T ss_conf 66999999885327872899999999999999699879---99973-----------2557--------7-888746787
Q ss_pred HHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHC-----CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9876410001210001104542467887765554206-----75526983033365322110000234321111224445
Q gi|254780434|r 125 SRLSKIQPTSPIGINLGANKDSKDFILDYVSGIRLFF-----TIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTR 199 (362)
Q Consensus 125 ~~l~~~~~~~pi~vsI~~~~~s~~~~~dy~~~~~~~~-----~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~ 199 (362)
T Consensus 64 ~~i~~~~--~~~LPNTAGc~taeEAVr-~A~lAREl~~~~g~~~tnwIKLEV----------i~D~~tLlPD~~etl~Aa 130 (267)
T CHL00162 64 DGLDWNK--LWLLPNTAGCQTAEEAIR-VAFLGRELAKQLGQEDNNFVKLEV----------IPDPKYLLPDPIGTLKAA 130 (267)
T ss_pred HHCCCCC--EEECCCCCCCCCHHHHHH-HHHHHHHHHHHCCCCCCCEEEEEE----------ECCCCCCCCCHHHHHHHH
T ss_conf 4337024--178566302287999999-999999985301567897799998----------279877798878999999
Q ss_pred HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 56553126885178650577774888999998764498299980665553234577544632211356454246899999
Q gi|254780434|r 200 EEEKIKTGKFVPIFLKISPDLSEEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAK 279 (362)
Q Consensus 200 ~~~~~~~~~~~Pi~vKLsPd~~~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~ 279 (362)
T Consensus 131 e~Lv~eG---F~Vl----pY~~dD--~v~akrLe~~Gc~avMP---------lgsPI-G------Sg~Gl~n--~~~l~~ 183 (267)
T CHL00162 131 EFLVRKG---FTVL----PYINAD--PVLAKQLEDIGCATVMP---------LGSPI-G------SGQGLQN--LLNLQI 183 (267)
T ss_pred HHHHHCC---CEEE----EECCCC--HHHHHHHHHCCCEEEEE---------CCCCC-C------CCCCCCC--HHHHHH
T ss_conf 9999789---9998----954899--89999998659868863---------45512-3------6887589--999999
Q ss_pred HHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHC-CCHH
Q ss_conf 997408974899967889999999999839997545278770-6978
Q gi|254780434|r 280 IRQRVGPKIAIIGTGGISSTKDALDKIMAGANLIQLYSAMIY-EGIS 325 (362)
Q Consensus 280 i~~~~~~~i~IIg~GGI~s~~Da~e~l~aGAs~VQi~Tali~-~Gp~ 325 (362)
T Consensus 184 i~e~--~~vPvIVDAGiG~pSdAa~aMElG~DaVL~NTAIA~A~dPv 228 (267)
T CHL00162 184 IIEN--AKIPVIIDAGIGTPSEASQAMELGASGVLLNTAVAKAKNPE 228 (267)
T ss_pred HHHC--CCCCEEEECCCCCHHHHHHHHHCCCCEEEECHHHHCCCCHH
T ss_conf 9964--89988996898967888999974677787016767169989