HHsearch alignment for GI: 254780434 and conserved domain: COG0069
>COG0069 GltB Glutamate synthase domain 2 [Amino acid transport and metabolism].
Probab=98.89 E-value=6.5e-08 Score=73.16 Aligned_cols=180 Identities=15% Similarity=0.173 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH
Q ss_conf 78877655542067552698303336532211000023432111122444556553126885178650577774888999
Q gi|254780434|r 149 FILDYVSGIRLFFTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVPIFLKISPDLSEEELDDI 228 (362)
Q Consensus 149 ~~~dy~~~~~~~~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~Pi~vKLsPd~~~~~i~~i 228 (362)
T Consensus 258 KV~~~IA~~R~~~pG~~~I-----SP~pH--HDiysieDLaqlI~dLk~~~--------~~~~I~VKlva---~~~v~~i 319 (485)
T COG0069 258 KVTPEIAKTRGSPPGVGLI-----SPPPH--HDIYSIEDLAQLIKDLKEAN--------PWAKISVKLVA---EHGVGTI 319 (485)
T ss_pred CCCHHHHHHCCCCCCCCCC-----CCCCC--CCCCCHHHHHHHHHHHHHCC--------CCCEEEEEEEC---CCCHHHH
T ss_conf 5798899761899887775-----89974--66569889999999999618--------89706999925---6556778
Q ss_pred HHHHHHCCCCEEEEECC---CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH--HCCCCEEEEEECCCCCHHHHH
Q ss_conf 99876449829998066---5553234577544632211356454246899999997--408974899967889999999
Q gi|254780434|r 229 AVEVLSHKVEGIIVSNT---TLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQ--RVGPKIAIIGTGGISSTKDAL 303 (362)
Q Consensus 229 a~~a~~~g~dGiv~~NT---~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~--~~~~~i~IIg~GGI~s~~Da~ 303 (362)
T Consensus 320 aagvakA~AD~I~IdG~~GGTGAsP~~~~--------~~~GiP~-e~glae~~q~L~~~glRd~v~l~~~Ggl~Tg~DVa 390 (485)
T COG0069 320 AAGVAKAGADVITIDGADGGTGASPLTSI--------DHAGIPW-ELGLAETHQTLVLNGLRDKVKLIADGGLRTGADVA 390 (485)
T ss_pred HHHHHHCCCCEEEECCCCCCCCCCCHHHH--------HCCCCHH-HHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH
T ss_conf 76664046988997589986787856576--------3687079-98899999999975986416999428706789999
Q ss_pred HHHHCCCCEEEECHHHHC-CC--------------------HH----------------HHHHHHHHHHHHHHHCCCCCH
Q ss_conf 999839997545278770-69--------------------78----------------999999999999998389977
Q gi|254780434|r 304 DKIMAGANLIQLYSAMIY-EG--------------------IS----------------LPKRIIQGLSDFLNKENEVNF 346 (362)
Q Consensus 304 e~l~aGAs~VQi~Tali~-~G--------------------p~----------------~~~~I~~~L~~~l~~~G~~si 346 (362)
T Consensus 391 ka~aLGAd~v~~gTa~lia~GCim~r~CH~~tCp~GIaTqdp~Lrkrl~~~~~~~~v~N~~~~~a~e~rella~lG~~~l 470 (485)
T COG0069 391 KAAALGADAVGFGTAALVALGCIMCRVCHTGTCPVGIATQDPELRKRLDVEGKPERVINYFTFVAEELRELLAALGKRSL 470 (485)
T ss_pred HHHHHCCCHHHHCHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 99970864552021999985338664415899975034058888763374410899999999999999999998678999
Q ss_pred HHHHCCCCH
Q ss_conf 896169752
Q gi|254780434|r 347 ENIRGSYTE 355 (362)
Q Consensus 347 ~e~iG~~~~ 355 (362)
T Consensus 471 ~el~g~~d~ 479 (485)
T COG0069 471 SELIGRTDL 479 (485)
T ss_pred HHHHCCHHH
T ss_conf 997454676