HHsearch alignment for GI: 254780434 and conserved domain: COG1902
>COG1902 NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion].
Probab=99.35 E-value=8.4e-10 Score=85.87 Aligned_cols=260 Identities=23% Similarity=0.276 Sum_probs=152.2
Q ss_pred EEEECCEECCCCEEECC---------CC--CCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEECC
Q ss_conf 16888733599748534---------68--88677988874036752410200136878998862688425554100002
Q gi|254780434|r 46 NTKVAGISLSNPLGMAA---------GY--DKNAEVPIELLKLGFGFVEIGTVTPHPQAGNPRPRVFRLTKDRAIINKLG 114 (362)
Q Consensus 46 ~~~~~Gl~~~nPiglAa---------G~--dk~~~~~~~l~~~G~G~v~~ktit~~p~~GNp~PR~~r~~~~~~iiN~~G 114 (362)
T Consensus 9 P~~lg~~~L~NRivmaPm~~~~a~~dG~pt~~~~~yy~~RA~gG~Glii~~~~~v~~~-g~~~~------------~~~~ 75 (363)
T COG1902 9 PLKLGGLTLKNRIVMAPMTRNRATPDGLPTDLLAEYYAERAKGGAGLIITEATAVDPG-GRGYP------------GQPG 75 (363)
T ss_pred CEEECCEEECCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCC-CCCCC------------CCCC
T ss_conf 8147998760523654755454569999888999999998648977799966740755-46589------------9866
Q ss_pred CCC----CCHHHHHHHHHHHHH------------------C--CCCCCEEECC----C--C---C----HHHHHHHHHHH
Q ss_conf 477----777889998764100------------------0--1210001104----5--4---2----46788776555
Q gi|254780434|r 115 FNN----AGYHTVFSRLSKIQP------------------T--SPIGINLGAN----K--D---S----KDFILDYVSGI 157 (362)
Q Consensus 115 l~N----~G~~~~~~~l~~~~~------------------~--~pi~vsI~~~----~--~---s----~~~~~dy~~~~ 157 (362)
T Consensus 76 l~~d~~i~~~~~vt~avH~~G~~i~iQL~H~Gr~~~~~~~~~~~~vapS~~~~~~~~~~~pr~mt~eeI~~ii~~f~~AA 155 (363)
T COG1902 76 LWSDAQIPGLKRLTEAVHAHGAKIFIQLWHAGRKARASHPWLPSAVAPSAIPAPGGRRATPRELTEEEIEEVIEDFARAA 155 (363)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 57866738899999999856995999822776133223567876457774425667888886589999999999999999
Q ss_pred HHHC-CCCCEEEE---------ECCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC----
Q ss_conf 4206-75526983---------0333653--221100002343211112244455655312688517865057777----
Q gi|254780434|r 158 RLFF-TIASYFTI---------NISSPNT--PGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVPIFLKISPDLS---- 221 (362)
Q Consensus 158 ~~~~-~~aD~iEi---------NiSCPNt--~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~Pi~vKLsPd~~---- 221 (362)
T Consensus 156 ~rA~~AGFDgVEIH~AhGYLi~qFlsp~tN~RtD~YGGSlENR~Rf~~EVv~aVr~~---vg~~~~vg~Rls~~d~~~~~ 232 (363)
T COG1902 156 RRAKEAGFDGVEIHGAHGYLLSQFLSPLTNKRTDEYGGSLENRARFLLEVVDAVREA---VGADFPVGVRLSPDDFFDGG 232 (363)
T ss_pred HHHHHCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH---HCCCCEEEEEECCCCCCCCC
T ss_conf 999983999899840444499985587557777766885899988999999999997---29886699997745467788
Q ss_pred ---HHHHHHHHHHHHHCC-CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC
Q ss_conf ---488899999876449-8299980665553234577544632211356454246899999997408974899967889
Q gi|254780434|r 222 ---EEELDDIAVEVLSHK-VEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVGPKIAIIGTGGIS 297 (362)
Q Consensus 222 ---~~~i~~ia~~a~~~g-~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~~~~i~IIg~GGI~ 297 (362)
T Consensus 233 g~~~~e~~~la~~L~~~G~~d~i~vs~~~~~~~------~~~~~~~-~~-----~~~~~a~~i~~~~--~~pvi~~G~i~ 298 (363)
T COG1902 233 GLTIEEAVELAKALEEAGLVDYIHVSEGGYERG------GTITVSG-PG-----YQVEFAARIKKAV--RIPVIAVGGIN 298 (363)
T ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC------CCCCCCC-CC-----HHHHHHHHHHHHC--CCCEEEECCCC
T ss_conf 888999999999998558844799603644578------8744466-41-----2478999998860--78779868979
Q ss_pred CHHHHHHHHHCC-CCEEEECHHHHCCCHHHHHHHHHHHHH
Q ss_conf 999999999839-997545278770697899999999999
Q gi|254780434|r 298 STKDALDKIMAG-ANLIQLYSAMIYEGISLPKRIIQGLSD 336 (362)
Q Consensus 298 s~~Da~e~l~aG-As~VQi~Tali~~Gp~~~~~I~~~L~~ 336 (362)
T Consensus 299 ~~~~Ae~~l~~g~aDlVa~gR~~lad-P~~v~k~~~g~~~ 337 (363)
T COG1902 299 DPEQAEEILASGRADLVAMGRPFLAD-PDLVLKAAEGREL 337 (363)
T ss_pred CHHHHHHHHHCCCCCEEEECHHHHCC-CCHHHHHHCCCCC
T ss_conf 99999999982998888726366509-2089999737876