HHsearch alignment for GI: 254780434 and conserved domain: PRK02506
>PRK02506 dihydroorotate dehydrogenase 1A; Reviewed.
Probab=100.00 E-value=0 Score=560.68 Aligned_cols=295 Identities=24% Similarity=0.341 Sum_probs=254.7
Q ss_pred CCEEEECCEECCCCEEECCC-CCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHH
Q ss_conf 31168887335997485346-88867798887403675241020013687899886268842555410000247777788
Q gi|254780434|r 44 RLNTKVAGISLSNPLGMAAG-YDKNAEVPIELLKLGFGFVEIGTVTPHPQAGNPRPRVFRLTKDRAIINKLGFNNAGYHT 122 (362)
Q Consensus 44 ~L~~~~~Gl~~~nPiglAaG-~dk~~~~~~~l~~~G~G~v~~ktit~~p~~GNp~PR~~r~~~~~~iiN~~Gl~N~G~~~ 122 (362)
T Consensus 1 ~~st~~~Gl~f~NPi~lAaG~~~~~~e~~~~~~~~G~G~v~~kTit~~pq~GNp~PR~~r~~--~~~iN~~G~~n~G~~~ 78 (308)
T PRK02506 1 STATQIAGFSFDNCLMNAAGVYCMTKEELEEVEASQAGSFVTKTATLEVRPGNPEPRYADTP--LGSINSMGLPNNGFDY 78 (308)
T ss_pred CCCEEECCEECCCCCEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEECC--CCHHHCCCCCCHHHHH
T ss_conf 98879899955998887867899899999999976973899542354576699998699767--5301215478563899
Q ss_pred HHHHHHHHH---HCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC-CHHHHHHHHHHHHHH
Q ss_conf 999876410---0012100011045424678877655542067552698303336532211000-023432111122444
Q gi|254780434|r 123 VFSRLSKIQ---PTSPIGINLGANKDSKDFILDYVSGIRLFFTIASYFTINISSPNTPGLRSLQ-KKKNLERLLIHVMQT 198 (362)
Q Consensus 123 ~~~~l~~~~---~~~pi~vsI~~~~~s~~~~~dy~~~~~~~~~~aD~iEiNiSCPNt~g~~~~~-~~~~l~~~l~~v~~~ 198 (362)
T Consensus 79 ~~~~l~~~~~~~~~~~vi~si~g~--~~~e~~~~~~~~~~-~~~~~~ielNiScPNt~g~~~~~~d~~~~~~il~~v~~~ 155 (308)
T PRK02506 79 YLDYVLDLQKTGPHKPHFLSVVGL--SPEETHTILKKIQA-SDFEGLVELNLSCPNVPGKPQIAYDFETTDQILTEVFTY 155 (308)
T ss_pred HHHHHHHHHHHCCCCCEEEEEEEC--CHHHHHHHHHHHHH-CCCCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHH
T ss_conf 999889999627999758888507--75377888999875-475425546333788510555522899999999999987
Q ss_pred HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC----CCCCCCCCCCCCCCCCCHHHH
Q ss_conf 5565531268851786505777748889999987644982999806655532345----775446322113564542468
Q gi|254780434|r 199 REEEKIKTGKFVPIFLKISPDLSEEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQ----CSDNHEQDGGLSGSPLFLKST 274 (362)
Q Consensus 199 ~~~~~~~~~~~~Pi~vKLsPd~~~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~----~~~~~~~~GGlSG~~i~~~al 274 (362)
T Consensus 156 ---------~~~Pi~vKlsP~~~~~~~~~~a~~~~~~~~~~i~~~nt~~~~~~i~~~~~~~~~~~~~GGlSG~~l~~~al 226 (308)
T PRK02506 156 ---------FTKPLGVKLPPYFDIVHFDQAAAIFNKYPLAFVNCVNSIGNGLVIEDESVVIKPKNGFGGIGGDYIKPTAL 226 (308)
T ss_pred ---------HHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf ---------50333455898777676999999856156537988702356620137751015678878877611337999
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCC
Q ss_conf 999999974089748999678899999999998399975452787706978999999999999998389977896169
Q gi|254780434|r 275 IALAKIRQRVGPKIAIIGTGGISSTKDALDKIMAGANLIQLYSAMIYEGISLPKRIIQGLSDFLNKENEVNFENIRGS 352 (362)
Q Consensus 275 ~~i~~i~~~~~~~i~IIg~GGI~s~~Da~e~l~aGAs~VQi~Tali~~Gp~~~~~I~~~L~~~l~~~G~~si~e~iG~ 352 (362)
T Consensus 227 ~~v~~~~~~~~~~i~IIg~GGI~s~~Da~e~i~aGAs~VQv~Tal~~~Gp~~~~~I~~~L~~~l~~~G~~si~d~~G~ 304 (308)
T PRK02506 227 ANVHAFYQRLKPSIQIIGTGGVKTGRDAFEHILCGASMVQVGTALHKEGPAIFERITKELKAIMVEKGYQSLEDFRGK 304 (308)
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHCCE
T ss_conf 999999998389963898667078999999998198720684222045947999999999999998499988996544