HHsearch alignment for GI: 254780434 and conserved domain: PRK05286
>PRK05286 dihydroorotate dehydrogenase 2; Reviewed.
Probab=100.00 E-value=0 Score=711.19 Aligned_cols=330 Identities=51% Similarity=0.850 Sum_probs=308.8
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH---HCCCCCCCCCCEEEECCEECCCCEEECCCCCCCHHHHHHHHHCCCC
Q ss_conf 8999999997508967889999999962011---1046788963116888733599748534688867798887403675
Q gi|254780434|r 4 ILHKLALRGLTHLDPEIAHHLSIVALKSGLL---SFFPVHSDPRLNTKVAGISLSNPLGMAAGYDKNAEVPIELLKLGFG 80 (362)
Q Consensus 4 ~~~~~~~~~l~~~~pe~ah~~~~~~~~~~~~---~~~~~~~~~~L~~~~~Gl~~~nPiglAaG~dk~~~~~~~l~~~G~G 80 (362)
T Consensus 1 ~y~~~~~pll~~ldpE~aH~~~~~~l~~~~~~~~~~~~~~~~~~L~~~i~Gl~f~nPiGLAAGfDKn~e~~~~l~~lGFG 80 (336)
T PRK05286 1 MYYPLLRPLLFKLDPERAHELTIRALKRAGRTLLARLLRYKDPRLPVTVMGLTFPNPVGLAAGFDKNGEAIDALGALGFG 80 (336)
T ss_pred CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCEEECCEECCCCCEECCCCCCCCCCCCCHHHCCCC
T ss_conf 91899999997699899999999999986135772431589866676888854699675556789997103726656866
Q ss_pred EEECCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHH-CCCCCCEEECCCCC--HHHHHHHHHHH
Q ss_conf 2410200136878998862688425554100002477777889998764100-01210001104542--46788776555
Q gi|254780434|r 81 FVEIGTVTPHPQAGNPRPRVFRLTKDRAIINKLGFNNAGYHTVFSRLSKIQP-TSPIGINLGANKDS--KDFILDYVSGI 157 (362)
Q Consensus 81 ~v~~ktit~~p~~GNp~PR~~r~~~~~~iiN~~Gl~N~G~~~~~~~l~~~~~-~~pi~vsI~~~~~s--~~~~~dy~~~~ 157 (362)
T Consensus 81 fvEvGTVT~~pq~GNpkPR~fRl~~~~aliNr~GfnN~G~~~~~~~L~~~~~~~~~lGvnIg~nk~t~~e~~~~Dy~~~~ 160 (336)
T PRK05286 81 FVEVGTVTPRPQPGNPKPRLFRLPEDEALINRMGFNNEGADALAERLKKAKPYKGPLGINIGKNKDTPLEDAVDDYLICL 160 (336)
T ss_pred EEEECCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 69970516998799999717981377637850577986899999999850567886589976237884166899999999
Q ss_pred HHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 42067552698303336532211000023432111122444556553126885178650577774888999998764498
Q gi|254780434|r 158 RLFFTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVPIFLKISPDLSEEELDDIAVEVLSHKV 237 (362)
Q Consensus 158 ~~~~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~Pi~vKLsPd~~~~~i~~ia~~a~~~g~ 237 (362)
T Consensus 161 ~~l~~~aDy~~INiSsPNT~glr~lq~~~~L~~ll~~v~~~~~~----~~~~~PI~vKisPDl~~~~l~~i~~~~~~~~i 236 (336)
T PRK05286 161 RKLYPYADYFTVNISSPNTPGLRDLQAGEALDELLAALKEAQAE----LGKYVPLLLKIAPDLSDEELDDIADLALEHGI 236 (336)
T ss_pred HHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH----CCCCCCEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 99826377899975689986520004669999999999999984----37888648832888887899999999998198
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECH
Q ss_conf 29998066555323457754463221135645424689999999740897489996788999999999983999754527
Q gi|254780434|r 238 EGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVGPKIAIIGTGGISSTKDALDKIMAGANLIQLYS 317 (362)
Q Consensus 238 dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~~~~i~IIg~GGI~s~~Da~e~l~aGAs~VQi~T 317 (362)
T Consensus 237 dGii~tNTt~~r~~l~-~~~~~~~GGLSG~pl~~~s~~~v~~~~~~~~~~~pIIgvGGI~s~~da~~~i~aGAslVQlyT 315 (336)
T PRK05286 237 DGIIATNTTLDRSGLE-GPNAEEAGGLSGRPLFERSTEVIRRLYKELGGRLPIIGVGGIDSAEDAYEKIRAGASLVQIYS 315 (336)
T ss_pred CEEEEECCCCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHH
T ss_conf 6899958867664456-655566687464067899999999999973999709998998999999999986996887416
Q ss_pred HHHCCCHHHHHHHHHHHHHHH
Q ss_conf 877069789999999999999
Q gi|254780434|r 318 AMIYEGISLPKRIIQGLSDFL 338 (362)
Q Consensus 318 ali~~Gp~~~~~I~~~L~~~l 338 (362)
T Consensus 316 gliy~GP~lv~~I~~~L~~lL 336 (336)
T PRK05286 316 GLIYEGPGLVKEIVRGLARLL 336 (336)
T ss_pred HHHHCCHHHHHHHHHHHHHHC
T ss_conf 787219079999999999759