HHsearch alignment for GI: 254780434 and conserved domain: TIGR00007
>TIGR00007 TIGR00007 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; InterPro: IPR006063 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (5.3.1.16 from EC), also known as Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase or HisA, catalyses the fourth step in histidine biosynthesis. HisA from Lactococcus lactis was found to be inactive . The putative HisA from Thermotoga maritima, is a conspicuous outlier to the set of all other HisA, including experimental HisA from the bacterium E. coli and the Archaeaon Methanococcus voltae. Neighbor joining shows HisA from Thermotoga maritima to be within the HisA family (with HisF as an outgroup) but with a long branch. ; GO: 0003949 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity, 0000105 histidine biosynthetic process.
Probab=97.16 E-value=0.0047 Score=40.37 Aligned_cols=90 Identities=21% Similarity=0.258 Sum_probs=63.9
Q ss_pred HHHHHHHHHHH-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHH
Q ss_conf 88999998764-49829998066555323457754463221135645424689999999740897489996788999999
Q gi|254780434|r 224 ELDDIAVEVLS-HKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVGPKIAIIGTGGISSTKDA 302 (362)
Q Consensus 224 ~i~~ia~~a~~-~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~~~~i~IIg~GGI~s~~Da 302 (362)
T Consensus 29 ~P~~~A~~~~~~~GA~~iHvVDL----D-----------GA~~g---~~~N~~~i~~I~~~~~~~vQv--GGGIRs~e~v 88 (241)
T TIGR00007 29 DPVEAAKKWEEFQGAKRIHVVDL----D-----------GALEG---GPVNLEVIKKIVEELGVPVQV--GGGIRSLEDV 88 (241)
T ss_pred CHHHHHHHHHHCCCCCEEEEEEC----C-----------HHHCC---CCCHHHHHHHHHHHCCCCEEE--CCCCCCHHHH
T ss_conf 98999999984169715999845----1-----------00068---620078999999861851798--1751688999
Q ss_pred HHHHHCCCCEEEECHHHHCCCHHHHHHHHHHH
Q ss_conf 99998399975452787706978999999999
Q gi|254780434|r 303 LDKIMAGANLIQLYSAMIYEGISLPKRIIQGL 334 (362)
Q Consensus 303 ~e~l~aGAs~VQi~Tali~~Gp~~~~~I~~~L 334 (362)
T Consensus 89 ~~ll~~Gv~RVI~GT~A-~~~~~~v~~~~~~~ 119 (241)
T TIGR00007 89 EKLLDLGVDRVIIGTAA-VENPDLVKELLKEY 119 (241)
T ss_pred HHHHHCCCCEEEEEEEE-ECCHHHHHHHHHHH
T ss_conf 99997398579973322-10869999999984