HHsearch alignment for GI: 254780434 and conserved domain: TIGR00007

>TIGR00007 TIGR00007 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; InterPro: IPR006063 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (5.3.1.16 from EC), also known as Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase or HisA, catalyses the fourth step in histidine biosynthesis. HisA from Lactococcus lactis was found to be inactive . The putative HisA from Thermotoga maritima, is a conspicuous outlier to the set of all other HisA, including experimental HisA from the bacterium E. coli and the Archaeaon Methanococcus voltae. Neighbor joining shows HisA from Thermotoga maritima to be within the HisA family (with HisF as an outgroup) but with a long branch. ; GO: 0003949 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity, 0000105 histidine biosynthetic process.
Probab=97.16  E-value=0.0047  Score=40.37  Aligned_cols=90  Identities=21%  Similarity=0.258  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHH-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHH
Q ss_conf             88999998764-49829998066555323457754463221135645424689999999740897489996788999999
Q gi|254780434|r  224 ELDDIAVEVLS-HKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVGPKIAIIGTGGISSTKDA  302 (362)
Q Consensus       224 ~i~~ia~~a~~-~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~~~~i~IIg~GGI~s~~Da  302 (362)
T Consensus        29 ~P~~~A~~~~~~~GA~~iHvVDL----D-----------GA~~g---~~~N~~~i~~I~~~~~~~vQv--GGGIRs~e~v   88 (241)
T TIGR00007        29 DPVEAAKKWEEFQGAKRIHVVDL----D-----------GALEG---GPVNLEVIKKIVEELGVPVQV--GGGIRSLEDV   88 (241)
T ss_pred             CHHHHHHHHHHCCCCCEEEEEEC----C-----------HHHCC---CCCHHHHHHHHHHHCCCCEEE--CCCCCCHHHH
T ss_conf             98999999984169715999845----1-----------00068---620078999999861851798--1751688999


Q ss_pred             HHHHHCCCCEEEECHHHHCCCHHHHHHHHHHH
Q ss_conf             99998399975452787706978999999999
Q gi|254780434|r  303 LDKIMAGANLIQLYSAMIYEGISLPKRIIQGL  334 (362)
Q Consensus       303 ~e~l~aGAs~VQi~Tali~~Gp~~~~~I~~~L  334 (362)
T Consensus        89 ~~ll~~Gv~RVI~GT~A-~~~~~~v~~~~~~~  119 (241)
T TIGR00007        89 EKLLDLGVDRVIIGTAA-VENPDLVKELLKEY  119 (241)
T ss_pred             HHHHHCCCCEEEEEEEE-ECCHHHHHHHHHHH
T ss_conf             99997398579973322-10869999999984