HHsearch alignment for GI: 254780434 and conserved domain: TIGR00734
>TIGR00734 hisAF_rel hisA/hisF family protein; InterPro: IPR004650 This family of proteins has so far been found in three archaeal species: Methanobacterium thermoautotrophicum, Methanococcus jannaschii, and Archaeoglobus fulgidus. Proteins are homologous to phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (HisA) and, with lower similarity, to the cyclase HisF, both of which are enzymes of histidine biosynthesis. Each species with this protein also encodes HisA. However, the function of proteins in this group is unknown..
Probab=90.72 E-value=0.92 Score=24.93 Aligned_cols=81 Identities=25% Similarity=0.299 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH
Q ss_conf 48889999987644982999806655532345775446322113564542468999999974089748999678899999
Q gi|254780434|r 222 EEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVGPKIAIIGTGGISSTKD 301 (362)
Q Consensus 222 ~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~~~~i~IIg~GGI~s~~D 301 (362)
T Consensus 148 ~~~leevrd~l~~f~~~GlI~Ld---------I~s----VGt~~G~n-----~ell~~~l~l~--e~PV~~GGGi~g~Ed 207 (230)
T TIGR00734 148 EESLEEVRDLLNSFDLDGLIVLD---------ISS----VGTSKGVN-----LELLKKVLELS--ERPVILGGGIKGVED 207 (230)
T ss_pred HHHHHHHHHHCCCCCCCEEEEEC---------CCC----CCCCCCCC-----HHHHHHHHHHH--CCCEEECCCCCCCCH
T ss_conf 45688887530663101379833---------633----05677878-----88999886442--487140687367510
Q ss_pred HHHHHHCCCCEEEECHHHHCCC
Q ss_conf 9999983999754527877069
Q gi|254780434|r 302 ALDKIMAGANLIQLYSAMIYEG 323 (362)
Q Consensus 302 a~e~l~aGAs~VQi~Tali~~G 323 (362)
T Consensus 208 lEl~~~mGv~avLvatA~-HkG 228 (230)
T TIGR00734 208 LELLKEMGVSAVLVATAV-HKG 228 (230)
T ss_pred HHHHHHCCCCEEEEEEEE-CCC
T ss_conf 788885687657553210-047