HHsearch alignment for GI: 254780434 and conserved domain: TIGR01108
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit; InterPro: IPR005776 This family describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea . The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.; GO: 0008948 oxaloacetate decarboxylase activity, 0006814 sodium ion transport.
Probab=95.20 E-value=0.18 Score=29.67 Aligned_cols=213 Identities=23% Similarity=0.317 Sum_probs=116.6
Q ss_pred HHHHHHCCCCEEEC-CCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCC-----CCEE-ECC
Q ss_conf 88874036752410-2001368789988626884255541000024777778899987641000121-----0001-104
Q gi|254780434|r 71 PIELLKLGFGFVEI-GTVTPHPQAGNPRPRVFRLTKDRAIINKLGFNNAGYHTVFSRLSKIQPTSPI-----GINL-GAN 143 (362)
Q Consensus 71 ~~~l~~~G~G~v~~-ktit~~p~~GNp~PR~~r~~~~~~iiN~~Gl~N~G~~~~~~~l~~~~~~~pi-----~vsI-~~~ 143 (362)
T Consensus 27 ~~~LD~vGfwSLEvWGGATFDaC~-----RF--L------------~EDPW~RL-R~lk~~~pnT~L~MLLRGQNLlGYR 86 (616)
T TIGR01108 27 LEKLDDVGFWSLEVWGGATFDACI-----RF--L------------NEDPWERL-RELKKALPNTKLQMLLRGQNLLGYR 86 (616)
T ss_pred HHHHHHCCCEEEEECCCHHHHHHH-----HH--C------------CCCHHHHH-HHHHHHCCCCCHHHHHCCCCCCCCC
T ss_conf 987502495565202441055784-----42--4------------88855899-9999735787512342045423441
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC-CCE--EEEECCCCC
Q ss_conf 54246788776555420675526983033365322110000234321111224445565531268-851--786505777
Q gi|254780434|r 144 KDSKDFILDYVSGIRLFFTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGK-FVP--IFLKISPDL 220 (362)
Q Consensus 144 ~~s~~~~~dy~~~~~~~~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~-~~P--i~vKLsPd~ 220 (362)
T Consensus 87 HYADDVVe~FV~~--a~~NG~DVFRi-F--------DALND~RNl~~ai~a~K--------k~g~dHvQg~iSYTtSPvH 147 (616)
T TIGR01108 87 HYADDVVEAFVKK--AVENGLDVFRI-F--------DALNDPRNLQKAIEAAK--------KHGADHVQGAISYTTSPVH 147 (616)
T ss_pred CCCHHHHHHHHHH--HHHCCCEEEEE-E--------CCCCCHHHHHHHHHHHH--------HHCCCEEEEEEECCCCCHH
T ss_conf 5843689999999--99759808995-1--------24588778999999999--------7389789999712468436
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE----EECCC
Q ss_conf 74888999998764498299980665553234577544632211356454246899999997408974899----96788
Q gi|254780434|r 221 SEEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRVGPKIAII----GTGGI 296 (362)
Q Consensus 221 ~~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~~~~i~II----g~GGI 296 (362)
T Consensus 148 Tl~~yl~la~~L~~~G~DSI~I----KDMaGlLTP~~---------------AYELV~alK~~~~-n~pvhLH~H~TtGm 207 (616)
T TIGR01108 148 TLEKYLELAKELLEMGVDSICI----KDMAGLLTPKV---------------AYELVSALKKEFG-NLPVHLHSHATTGM 207 (616)
T ss_pred HHHHHHHHHHHHHHHCCCEEEE----ECCCCCCCHHH---------------HHHHHHHHHHHCC-CEEEEEECCCCHHH
T ss_conf 7888999999999818860552----02004644158---------------9999999974239-74688632472337
Q ss_pred CCHHHHHHHHHCCCCEEEECHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9999999999839997545278770697899999999999999838997
Q gi|254780434|r 297 SSTKDALDKIMAGANLIQLYSAMIYEGISLPKRIIQGLSDFLNKENEVN 345 (362)
Q Consensus 297 ~s~~Da~e~l~aGAs~VQi~Tali~~Gp~~~~~I~~~L~~~l~~~G~~s 345 (362)
T Consensus 208 A~-~AllkA~EAG~d~iDTAisS~S~gtSHPp--tE~lv~~L~~~gyD~ 253 (616)
T TIGR01108 208 AE-MALLKAIEAGADMIDTAISSMSGGTSHPP--TETLVAALRGTGYDT 253 (616)
T ss_pred HH-HHHHHHHHCCCCCCHHCCCCCCCCCCCCH--HHHHHHHHHCCCCCC
T ss_conf 99-99998887078800200552347888874--799999970578743