HHsearch alignment for GI: 254780434 and conserved domain: TIGR01163
>TIGR01163 rpe ribulose-phosphate 3-epimerase; InterPro: IPR000056 Ribulose-phosphate 3-epimerase (5.1.3.1 from EC) (also known as pentose-5-phosphate 3-epimerase or PPE) is the enzyme that converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. In Alcaligenes eutrophus two copies of the gene coding for PPE are known , one is chromosomally encoded P40117 from SWISSPROT, the other one is on a plasmid Q04539 from SWISSPROT. PPE has been found in a wide range of bacteria, archaebacteria, fungi and plants. All the proteins have from 209 to 241 amino acid residues. The enzyme has a TIM barrel structure.; GO: 0004750 ribulose-phosphate 3-epimerase activity, 0005975 carbohydrate metabolic process.
Probab=96.88 E-value=0.044 Score=33.85 Aligned_cols=200 Identities=19% Similarity=0.288 Sum_probs=119.2
Q ss_pred CEEECCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCC--CCHHHHHHHHHHHHHCC
Q ss_conf 7485346888677988874036752410200136878998862688425554100002477--77788999876410001
Q gi|254780434|r 57 PLGMAAGYDKNAEVPIELLKLGFGFVEIGTVTPHPQAGNPRPRVFRLTKDRAIINKLGFNN--AGYHTVFSRLSKIQPTS 134 (362)
Q Consensus 57 PiglAaG~dk~~~~~~~l~~~G~G~v~~ktit~~p~~GNp~PR~~r~~~~~~iiN~~Gl~N--~G~~~~~~~l~~~~~~~ 134 (362)
T Consensus 4 PSILsADf~rLgee~~~v~~AGaD~iH~DVM-----DGH-------------FV-----PNlT~Gp~-v~~~~r~~g~~~ 59 (216)
T TIGR01163 4 PSILSADFARLGEEVKAVEEAGADLIHVDVM-----DGH-------------FV-----PNLTFGPP-VLEALRKYGTKL 59 (216)
T ss_pred CHHHHCCHHHHHHHHHHHHHCCCCEEEEEEC-----CCC-------------CC-----CCCCCCHH-HHHHHHHHCCCC
T ss_conf 1255504777999999999669978998624-----797-------------17-----71002778-999887407952
Q ss_pred CCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 21000110454246788776555420675526983033365322110000234321111224445565531268851786
Q gi|254780434|r 135 PIGINLGANKDSKDFILDYVSGIRLFFTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVMQTREEEKIKTGKFVPIFL 214 (362)
Q Consensus 135 pi~vsI~~~~~s~~~~~dy~~~~~~~~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~~~~~~~~~~~~~~~Pi~v 214 (362)
T Consensus 60 P~DVHLMv~~-----pd~~~~~Fa~a--GA~~I~vH~-----------Ea~~h~~R~l~~Ik~~---------G~~A-G~ 111 (216)
T TIGR01163 60 PIDVHLMVEN-----PDRYIEDFAEA--GADIITVHA-----------EATEHIHRLLQLIKEL---------GAKA-GI 111 (216)
T ss_pred CEEEEECCCC-----HHHHHHHHHHH--CCCEEEEEC-----------CCCCCHHHHHHHHHHC---------CCCE-EE
T ss_conf 1266303578-----57778899970--899899843-----------7762679999999971---------8970-68
Q ss_pred ECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-----CCCEE
Q ss_conf 5057777488899999876449829998066555323457754463221135645424689999999740-----89748
Q gi|254780434|r 215 KISPDLSEEELDDIAVEVLSHKVEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTIALAKIRQRV-----GPKIA 289 (362)
Q Consensus 215 KLsPd~~~~~i~~ia~~a~~~g~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~~i~~i~~~~-----~~~i~ 289 (362)
T Consensus 112 v~NP~TPl~~~~~~L~~-----~D~VLl------------MSVnPG---FgGQkFIP~~~~Kir~~R~~id~~~~~~~~~ 171 (216)
T TIGR01163 112 VLNPATPLEALEYVLED-----VDLVLL------------MSVNPG---FGGQKFIPETLEKIRELRKMIDKLELGLSIL 171 (216)
T ss_pred EECCCCCHHHHHHHHHH-----CCEEEE------------EEEECC---CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 86799998789989876-----298998------------876079---9884110578999999999998602799558
Q ss_pred EEEECCCCCHHHHHHHHHCCCCEEEECHHHHCCCH--HHHHHH
Q ss_conf 99967889999999999839997545278770697--899999
Q gi|254780434|r 290 IIGTGGISSTKDALDKIMAGANLIQLYSAMIYEGI--SLPKRI 330 (362)
Q Consensus 290 IIg~GGI~s~~Da~e~l~aGAs~VQi~Tali~~Gp--~~~~~I 330 (362)
T Consensus 172 ieVDGGv~~-~ni~~~~~AGAD~~VaGSa-iF~~~s~d~~~~i 212 (216)
T TIGR01163 172 IEVDGGVNE-DNIAEVAEAGADILVAGSA-IFGADSLDYKEAI 212 (216)
T ss_pred EEECCCCCH-HHHHHHHHCCCCEEEEEEE-EECCCCCCHHHHH
T ss_conf 997179897-6799999758989998310-2088866879999