HHsearch alignment for GI: 254780434 and conserved domain: TIGR01212
>TIGR01212 TIGR01212 radical SAM protein, TIGR01212 family; InterPro: IPR005911 This uncharacterised protein family shows significant similarity to IPR005910 from INTERPRO, a longer protein that is a histone acetyltransferase at its C-terminus and is a subunit of RNA polymerase II (in yeast). This family lacks the GNAT acetyltransferase domain..
Probab=90.12 E-value=1.5 Score=23.44 Aligned_cols=192 Identities=14% Similarity=0.225 Sum_probs=103.7
Q ss_pred HHHHHHHHHH-HHHCCCCCCEEECCCC-CHHHHHHHHHHHHHHCCCCCE-EEEECCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 7889998764-1000121000110454-246788776555420675526-983033365322110000234321111224
Q gi|254780434|r 120 YHTVFSRLSK-IQPTSPIGINLGANKD-SKDFILDYVSGIRLFFTIASY-FTINISSPNTPGLRSLQKKKNLERLLIHVM 196 (362)
Q Consensus 120 ~~~~~~~l~~-~~~~~pi~vsI~~~~~-s~~~~~dy~~~~~~~~~~aD~-iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~ 196 (362)
T Consensus 95 ve~Lk~~y~~aL~~~~vVGlsvgTRPDC~P~~VLDlL~ey--~~~GyevWvELGLQtah~~TL~~INRgHd~~~y~~a~~ 172 (307)
T TIGR01212 95 VEVLKEMYEQALSEDDVVGLSVGTRPDCVPDEVLDLLAEY--KERGYEVWVELGLQTAHDRTLKKINRGHDFACYVDAVK 172 (307)
T ss_pred HHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHH--HHCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 6888899998763278057753688987747899999999--54975899960535655899998514378789999999
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEE------CCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 44556553126885178650577774888999998764498299980------665553234577544632211356454
Q gi|254780434|r 197 QTREEEKIKTGKFVPIFLKISPDLSEEELDDIAVEVLSHKVEGIIVS------NTTLSRKGVQCSDNHEQDGGLSGSPLF 270 (362)
Q Consensus 197 ~~~~~~~~~~~~~~Pi~vKLsPd~~~~~i~~ia~~a~~~g~dGiv~~------NT~~~~~~~~~~~~~~~~GGlSG~~i~ 270 (362)
T Consensus 173 ~~~krGikVC-~--H~I~GLPgE-~~~~~~eTak~~~~l~vdGiKiH~LhvvkGt~m~k--------~Y~~G~~~~l~~e 240 (307)
T TIGR01212 173 RARKRGIKVC-S--HVILGLPGE-DREEMLETAKIVASLDVDGIKIHPLHVVKGTKMAK--------QYEKGELKTLSLE 240 (307)
T ss_pred HHHHCCCEEE-E--EEEECCCCC-CHHHHHHHHHHHHHCCCCEEEEEEEEEEECCHHHH--------HHHCCCEEECCHH
T ss_conf 9976598899-9--987428988-88899999999983798848872017873575788--------7545740104767
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCC-CCEEEECHHHHC--CCHHHHHHHHHHHHHHHHHCC
Q ss_conf 246899999997408974899967889999999999839-997545278770--697899999999999999838
Q gi|254780434|r 271 LKSTIALAKIRQRVGPKIAIIGTGGISSTKDALDKIMAG-ANLIQLYSAMIY--EGISLPKRIIQGLSDFLNKEN 342 (362)
Q Consensus 271 ~~al~~i~~i~~~~~~~i~IIg~GGI~s~~Da~e~l~aG-As~VQi~Tali~--~Gp~~~~~I~~~L~~~l~~~G 342 (362)
T Consensus 241 ~Y~~~-~~d~le~lpP~vv-------------~HRi~~dk~~~~~~i~P~W~tf~~k~---~~~~~i~~~Le~rG 298 (307)
T TIGR01212 241 EYISL-ACDFLEHLPPEVV-------------VHRISGDKAPRETLIAPEWCTFKNKW---EVMNKIEEELERRG 298 (307)
T ss_pred HHHHH-HHHHHHCCCCCEE-------------EEEECCCCCCCCCEECCCCHHHHHHH---HHHHHHHHHHHHCC
T ss_conf 79999-9999850898559-------------98412777884515567402267899---99999999985326