HHsearch alignment for GI: 254780434 and conserved domain: TIGR01361
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase; InterPro: IPR006268 These sequences are one of at least three types of phospho-2-dehydro-3-deoxyheptonate aldolase (DAHP synthase). This enzyme catalyzes the first of 7 steps in the biosynthesis of chorismate, that last common precursor of all three aromatic amino acids and of PABA, ubiquinone and menaquinone. Some members of this family, including an experimentally characterised member from Bacillus subtilis, are bifunctional, with a chorismate mutase domain N-terminal to this region. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.; GO: 0016832 aldehyde-lyase activity, 0009073 aromatic amino acid family biosynthetic process.
Probab=93.69 E-value=0.6 Score=26.17 Aligned_cols=229 Identities=18% Similarity=0.224 Sum_probs=126.0
Q ss_pred CCEEEECCEECCCC-EEECCCCC--CCHHHHHHHHHC--CCCEEECCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCCC
Q ss_conf 31168887335997-48534688--867798887403--67524102001368789988626884255541000024777
Q gi|254780434|r 44 RLNTKVAGISLSNP-LGMAAGYD--KNAEVPIELLKL--GFGFVEIGTVTPHPQAGNPRPRVFRLTKDRAIINKLGFNNA 118 (362)
Q Consensus 44 ~L~~~~~Gl~~~nP-iglAaG~d--k~~~~~~~l~~~--G~G~v~~ktit~~p~~GNp~PR~~r~~~~~~iiN~~Gl~N~ 118 (362)
T Consensus 11 ~tv~~v~~v~IG~G~~~~iAGPCsvEs~eq~~~~A~~vk~~Ga~~LRGGAfKPRT-SP----------------YsFQGl 73 (262)
T TIGR01361 11 KTVVDVKGVKIGEGSPIVIAGPCSVESEEQIVETARFVKEAGAKILRGGAFKPRT-SP----------------YSFQGL 73 (262)
T ss_pred CCEEECCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCC-CC----------------CCCCCC
T ss_conf 6157718577538478998648774887999999999986674043066348888-88----------------412474
Q ss_pred CHHHHHHHHHHHH--HCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 7788999876410--00121000110454246788776555420675526983033365322110000234321111224
Q gi|254780434|r 119 GYHTVFSRLSKIQ--PTSPIGINLGANKDSKDFILDYVSGIRLFFTIASYFTINISSPNTPGLRSLQKKKNLERLLIHVM 196 (362)
Q Consensus 119 G~~~~~~~l~~~~--~~~pi~vsI~~~~~s~~~~~dy~~~~~~~~~~aD~iEiNiSCPNt~g~~~~~~~~~l~~~l~~v~ 196 (362)
T Consensus 74 g~~g-l~~l~~A~~~~GL~~vTEvmd~-------~d----~e~~~~y~D~lQi--------GARNmQNF~LL~~----v- 128 (262)
T TIGR01361 74 GEEG-LKLLRRAADETGLPVVTEVMDP-------RD----VEIVAEYADILQI--------GARNMQNFELLKE----V- 128 (262)
T ss_pred HHHH-HHHHHHHHHHCCCEEEEEEECH-------HH----HHHHHHHHHHHHH--------CCCCCCCHHHHHH----H-
T ss_conf 1899-9999999986099489886362-------56----7778765113422--------2541225699999----7-
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCC-CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 4455655312688517865057777488899999876449-829998066555323457754463221135645424689
Q gi|254780434|r 197 QTREEEKIKTGKFVPIFLKISPDLSEEELDDIAVEVLSHK-VEGIIVSNTTLSRKGVQCSDNHEQDGGLSGSPLFLKSTI 275 (362)
Q Consensus 197 ~~~~~~~~~~~~~~Pi~vKLsPd~~~~~i~~ia~~a~~~g-~dGiv~~NT~~~~~~~~~~~~~~~~GGlSG~~i~~~al~ 275 (362)
T Consensus 129 ---------G~~~KPVLLKRG~~aTi~EwL~AAEYIl~~GsN~~ViLCER-----GIRTfE~~TR~---------TLD~s 185 (262)
T TIGR01361 129 ---------GKQGKPVLLKRGMGATIEEWLEAAEYILSEGSNGNVILCER-----GIRTFEKSTRN---------TLDLS 185 (262)
T ss_pred ---------HHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEC-----CCCCCCCHHHH---------HHHHH
T ss_conf ---------22379755307721589999999999984688995489975-----85676300245---------33378
Q ss_pred HHHHHHHHCCCCEEEEE----ECCCCCHHH--HHHHHHCCCCEEEE------CHHHHCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 99999974089748999----678899999--99999839997545------27877069789999999999999983
Q gi|254780434|r 276 ALAKIRQRVGPKIAIIG----TGGISSTKD--ALDKIMAGANLIQL------YSAMIYEGISLPKRIIQGLSDFLNKE 341 (362)
Q Consensus 276 ~i~~i~~~~~~~i~IIg----~GGI~s~~D--a~e~l~aGAs~VQi------~Tali~~Gp~~~~~I~~~L~~~l~~~ 341 (362)
T Consensus 186 aV~~~K~~t--HLPi~VDPSH~~GrRdLV~plA~AA~A~GADgl~iEVHp~Pe~AL-SD~~Qql~~c-~~f~~~~~~~ 259 (262)
T TIGR01361 186 AVPLLKKET--HLPIIVDPSHAAGRRDLVLPLAKAAIAAGADGLMIEVHPDPEKAL-SDSKQQLTPC-EEFKRLVKEL 259 (262)
T ss_pred HHHHHHHCC--CCCEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHC-CCCCCCCCHH-HHHHHHHHHH
T ss_conf 999998605--898787187987624578899999897574736898667833320-7871144667-8899999985